/var/www/html/cpndb/blastp_results/b15977.blastp
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= b15977
(184 letters)
Database: reference_a_ut
18,818 sequences; 3,477,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
b32847 Gardnerella vaginalis UGent 25.49 LMG 30819 365 e-132
b32846 Gardnerella vaginalis UGent 09.07 LMG 30816 365 e-132
b32845 WP_004112644 Gardnerella vaginalis UGent 09.01 LMG 3... 365 e-132
b32844 Gardnerella piotii UGent 21.28 LMG 30820 365 e-132
b32843 Gardnerella piotii UGent 18.01 LMG 30818 365 e-132
b28179 KMT46631 Gardnerella vaginalis 3549624 365 e-132
b28176 KXA18570 Gardnerella sp. GED7760B (Genome sp. 11) 365 e-132
b28175 KXA15175 Gardnerella sp. GED7275B (Genome sp. 3) 365 e-132
b28174 EPI53392 Gardnerella vaginalis JCP7672 365 e-132
b26735 EPI43152 Gardnerella piotii JCP8522 365 e-132
b26733 EPI45475 Gardnerella piotii JCP8151B 365 e-132
b26732 EPI48223 Gardnerella piotii JCP8151A 365 e-132
b26731 EPI49092 Gardnerella vaginalis JCP8108 365 e-132
b26730 EPI49919 Gardnerella sp. JCP7719 (Genome sp. 3) 365 e-132
b26729 EPI52575 Gardnerella sp. JCP8017A (Genome sp. 3) 365 e-132
b26728 EPI55200 Gardnerella sp. JCP7659 (Genome sp. 3) 365 e-132
b26727 EPI57220 Gardnerella vaginalis JCP7275 365 e-132
b26726 EPI57609 Gardnerella vaginalis JCP7276 365 e-132
b26725 EPI59348 Gardnerella piotii JCP8066 365 e-132
b26724 EPI61039 Gardnerella piotii JCP8070 365 e-132
>b32847 Gardnerella vaginalis UGent 25.49 LMG 30819
Length = 184
Score = 365 bits (938), Expect = e-132, Method: Compositional matrix adjust.
Identities = 184/184 (100%), Positives = 184/184 (100%)
Query: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS
Sbjct: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
Query: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT
Sbjct: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
Query: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN
Sbjct: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
Query: 181 TVAV 184
TVAV
Sbjct: 181 TVAV 184
>b32846 Gardnerella vaginalis UGent 09.07 LMG 30816
Length = 184
Score = 365 bits (938), Expect = e-132, Method: Compositional matrix adjust.
Identities = 184/184 (100%), Positives = 184/184 (100%)
Query: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS
Sbjct: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
Query: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT
Sbjct: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
Query: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN
Sbjct: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
Query: 181 TVAV 184
TVAV
Sbjct: 181 TVAV 184
>b32845 WP_004112644 Gardnerella vaginalis UGent 09.01 LMG 30936
Length = 184
Score = 365 bits (938), Expect = e-132, Method: Compositional matrix adjust.
Identities = 184/184 (100%), Positives = 184/184 (100%)
Query: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS
Sbjct: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
Query: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT
Sbjct: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
Query: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN
Sbjct: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
Query: 181 TVAV 184
TVAV
Sbjct: 181 TVAV 184
>b32844 Gardnerella piotii UGent 21.28 LMG 30820
Length = 184
Score = 365 bits (938), Expect = e-132, Method: Compositional matrix adjust.
Identities = 184/184 (100%), Positives = 184/184 (100%)
Query: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS
Sbjct: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
Query: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT
Sbjct: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
Query: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN
Sbjct: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
Query: 181 TVAV 184
TVAV
Sbjct: 181 TVAV 184
>b32843 Gardnerella piotii UGent 18.01 LMG 30818
Length = 184
Score = 365 bits (938), Expect = e-132, Method: Compositional matrix adjust.
Identities = 184/184 (100%), Positives = 184/184 (100%)
Query: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS
Sbjct: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
Query: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT
Sbjct: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
Query: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN
Sbjct: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
Query: 181 TVAV 184
TVAV
Sbjct: 181 TVAV 184
>b28179 KMT46631 Gardnerella vaginalis 3549624
Length = 184
Score = 365 bits (938), Expect = e-132, Method: Compositional matrix adjust.
Identities = 184/184 (100%), Positives = 184/184 (100%)
Query: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS
Sbjct: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
Query: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT
Sbjct: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
Query: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN
Sbjct: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
Query: 181 TVAV 184
TVAV
Sbjct: 181 TVAV 184
>b28176 KXA18570 Gardnerella sp. GED7760B (Genome sp. 11)
Length = 184
Score = 365 bits (938), Expect = e-132, Method: Compositional matrix adjust.
Identities = 184/184 (100%), Positives = 184/184 (100%)
Query: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS
Sbjct: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
Query: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT
Sbjct: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
Query: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN
Sbjct: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
Query: 181 TVAV 184
TVAV
Sbjct: 181 TVAV 184
>b28175 KXA15175 Gardnerella sp. GED7275B (Genome sp. 3)
Length = 184
Score = 365 bits (938), Expect = e-132, Method: Compositional matrix adjust.
Identities = 184/184 (100%), Positives = 184/184 (100%)
Query: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS
Sbjct: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
Query: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT
Sbjct: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
Query: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN
Sbjct: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
Query: 181 TVAV 184
TVAV
Sbjct: 181 TVAV 184
>b28174 EPI53392 Gardnerella vaginalis JCP7672
Length = 184
Score = 365 bits (938), Expect = e-132, Method: Compositional matrix adjust.
Identities = 184/184 (100%), Positives = 184/184 (100%)
Query: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS
Sbjct: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
Query: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT
Sbjct: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
Query: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN
Sbjct: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
Query: 181 TVAV 184
TVAV
Sbjct: 181 TVAV 184
>b26735 EPI43152 Gardnerella piotii JCP8522
Length = 184
Score = 365 bits (938), Expect = e-132, Method: Compositional matrix adjust.
Identities = 184/184 (100%), Positives = 184/184 (100%)
Query: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS
Sbjct: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
Query: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT
Sbjct: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
Query: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN
Sbjct: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
Query: 181 TVAV 184
TVAV
Sbjct: 181 TVAV 184
>b26733 EPI45475 Gardnerella piotii JCP8151B
Length = 184
Score = 365 bits (938), Expect = e-132, Method: Compositional matrix adjust.
Identities = 184/184 (100%), Positives = 184/184 (100%)
Query: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS
Sbjct: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
Query: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT
Sbjct: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
Query: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN
Sbjct: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
Query: 181 TVAV 184
TVAV
Sbjct: 181 TVAV 184
>b26732 EPI48223 Gardnerella piotii JCP8151A
Length = 184
Score = 365 bits (938), Expect = e-132, Method: Compositional matrix adjust.
Identities = 184/184 (100%), Positives = 184/184 (100%)
Query: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS
Sbjct: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
Query: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT
Sbjct: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
Query: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN
Sbjct: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
Query: 181 TVAV 184
TVAV
Sbjct: 181 TVAV 184
>b26731 EPI49092 Gardnerella vaginalis JCP8108
Length = 184
Score = 365 bits (938), Expect = e-132, Method: Compositional matrix adjust.
Identities = 184/184 (100%), Positives = 184/184 (100%)
Query: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS
Sbjct: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
Query: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT
Sbjct: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
Query: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN
Sbjct: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
Query: 181 TVAV 184
TVAV
Sbjct: 181 TVAV 184
>b26730 EPI49919 Gardnerella sp. JCP7719 (Genome sp. 3)
Length = 184
Score = 365 bits (938), Expect = e-132, Method: Compositional matrix adjust.
Identities = 184/184 (100%), Positives = 184/184 (100%)
Query: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS
Sbjct: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
Query: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT
Sbjct: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
Query: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN
Sbjct: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
Query: 181 TVAV 184
TVAV
Sbjct: 181 TVAV 184
>b26729 EPI52575 Gardnerella sp. JCP8017A (Genome sp. 3)
Length = 184
Score = 365 bits (938), Expect = e-132, Method: Compositional matrix adjust.
Identities = 184/184 (100%), Positives = 184/184 (100%)
Query: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS
Sbjct: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
Query: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT
Sbjct: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
Query: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN
Sbjct: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
Query: 181 TVAV 184
TVAV
Sbjct: 181 TVAV 184
>b26728 EPI55200 Gardnerella sp. JCP7659 (Genome sp. 3)
Length = 184
Score = 365 bits (938), Expect = e-132, Method: Compositional matrix adjust.
Identities = 184/184 (100%), Positives = 184/184 (100%)
Query: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS
Sbjct: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
Query: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT
Sbjct: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
Query: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN
Sbjct: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
Query: 181 TVAV 184
TVAV
Sbjct: 181 TVAV 184
>b26727 EPI57220 Gardnerella vaginalis JCP7275
Length = 184
Score = 365 bits (938), Expect = e-132, Method: Compositional matrix adjust.
Identities = 184/184 (100%), Positives = 184/184 (100%)
Query: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS
Sbjct: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
Query: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT
Sbjct: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
Query: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN
Sbjct: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
Query: 181 TVAV 184
TVAV
Sbjct: 181 TVAV 184
>b26726 EPI57609 Gardnerella vaginalis JCP7276
Length = 184
Score = 365 bits (938), Expect = e-132, Method: Compositional matrix adjust.
Identities = 184/184 (100%), Positives = 184/184 (100%)
Query: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS
Sbjct: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
Query: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT
Sbjct: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
Query: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN
Sbjct: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
Query: 181 TVAV 184
TVAV
Sbjct: 181 TVAV 184
>b26725 EPI59348 Gardnerella piotii JCP8066
Length = 184
Score = 365 bits (938), Expect = e-132, Method: Compositional matrix adjust.
Identities = 184/184 (100%), Positives = 184/184 (100%)
Query: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS
Sbjct: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
Query: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT
Sbjct: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
Query: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN
Sbjct: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
Query: 181 TVAV 184
TVAV
Sbjct: 181 TVAV 184
>b26724 EPI61039 Gardnerella piotii JCP8070
Length = 184
Score = 365 bits (938), Expect = e-132, Method: Compositional matrix adjust.
Identities = 184/184 (100%), Positives = 184/184 (100%)
Query: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS
Sbjct: 1 ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS 60
Query: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT
Sbjct: 61 AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT 120
Query: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN
Sbjct: 121 AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN 180
Query: 181 TVAV 184
TVAV
Sbjct: 181 TVAV 184
Database: reference_a_ut
Posted date: Jul 22, 2024 1:00 AM
Number of letters in database: 3,477,153
Number of sequences in database: 18,818
Lambda K H
0.312 0.131 0.348
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 18818
Number of Hits to DB: 2,675,792
Number of extensions: 87209
Number of successful extensions: 31154
Number of sequences better than 10.0: 18795
Number of HSP's gapped: 18807
Number of HSP's successfully gapped: 18801
Length of query: 184
Length of database: 3,477,153
Length adjustment: 83
Effective length of query: 101
Effective length of database: 1,915,259
Effective search space: 193441159
Effective search space used: 193441159
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 51 (24.3 bits)