RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b28176 |
| Chaperonin Group: | I |
| Deposit Date: | 2016-10-03 |
| Type: | ref |
| Type strain?: | no |
| Genus: | Gardnerella |
| Species: | sp. |
| Strain: | GED7760B |
| Lineage: | root; cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella |
| Original ID: | (Genome sp. 11) |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | LRQA01000029 |
| Peptide Genbank Accession: | KXA18570 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | Reference genome for the Human Microbiome Project. Genome species 11 in Vaneechoutte et al. 2019 |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAAAGATTATTGCCTATGAAGAGGATGCCCGTCAGGGTATGCTTGCTGGTCTTGAT AAGCTTGCAAATACAGTAAAGGTCACACTTGGACCAAAAGGTCGTAATGTAGTTTTAGAT AAGTCTTACGGTGCTCCAACAATCACCAACGATGGCGTTTCAATCGCTAAGGAGATTGAT CTCGAAGATCCATACGAGCGCATTGGCGCAGAGTTGGTAAAGGAAGTTGCTAAGAAGACC GACGACGTTGCTGGTGACGGTACTACAACTGCTACCGTTTTGGCTCAGTCTTTGGTTCAC GAAGGCTTAAAGAACGTTGTTGCTGGAAGCAATCCAATTGCTCTTCGCAGGGGCATTGAA AAGGCTTCCGAGGCAATTGTTAAGGAATTGCTTGCATCTGCGAAAGATGTTGAAACCAAG GATCAGATTGCTGCTACTGCTACTATTTCTGCAGCCGATCCAGAAGTTGGCGAAAAGATT GCAGAAGCTCTAGATAAGGTTGGCCAAGACGGTGTTGTTACTGTTGAAGACAACAACAAG TTTGGTCTTGATTTGGACTTTACCGAAGGTATGCGTTTTGATAAGGGCTATATTTCCCCT TACTTTGTAACCAATGCAGAAGATCAGACTGCTGTTTTGGAAGACCCATACATTTTGCTC ACTTCTGGTAAGGTTTCTAGCCAGCAAGACATTGTTCATGTTGCTGAACTTGTTATGAAG TCTGGAAAGCCATTGCTTATTATTGCAGAAGATGTTGATGGCGAAGCTTTGCCAACGCTT GTTCTTAACAAGATTCGTGGCACTTTCAACACTGTAGCTGTTAAAGCTCCAGGCTTTGGC GATCGCCGTAAGGCAATGTTGCGAGATATGGCAATTTTGACTGGTGCTCAGGTTGTTTCC GATGATCTTGGCTTAAAGCTCGATTCTATCGATGCTTCTGTGTTTGGTCATGCAGCAAAG GTAATCGTTTCTAAGGATGAAACAACTATTGTTTCTGGCGCTGGCTCTAAGGAAGATGTT GAGGCTCGTGTTGCTCAGATTCGTGCAGAAATTGAAAACACCGATTCTGATTACGATCGC GAAAAGCTTCAGGAGCGTCTTGCTAAGCTTGCTGGTGGCGTAGCTGTTATTAAGGTTGGC GCTGCTACCGAGGTAGAAGCCAAGGAACGCAAGCATCGCATTGAAGATGCAGTGCGTAAC GCTAAGGCTGCAATCGAAGAGGGCTTGCTCCCAGGCGGCGGCGTTGCTCTTGTTCAGGCT GCTGCAAAGGTAGAAAAGTCTGCCGCAATTGCCGATCTTAAGGGCGAAGAAGCAACAGGC GCTGCAATCGTGTTCCGCGCTGTAGAAGCTCCAATCAAGCAGATTGCTCAAAACAGCGGT GTTTCTGGAGACGTTGTTCTTAACAAGGTTCGCGAGCTTCCAGAAGGCCAGGGCTTTAAC GCTGCAACCAACGCTTACGAAGATTTGATGGCTGCTGGCGTTACTGATCCAGTTAAGGTA ACTCGTTCTGCTCTACAGAATGCTGCTTCTATTGCTGGTTTGTTCTTAACAACCGAAGCT GTTGTTGCCAACAAGCCAGAAAAGCCAGCTGCAGCTCCAGCTGGCGGCGCAGAGATGGGC TACTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKIIAYEEDARQGMLAGLDKLANTVKVTLGPKGRNVVLDKSYGAPTITNDGVSIAKEID LEDPYERIGAELVKEVAKKTDDVAGDGTTTATVLAQSLVHEGLKNVVAGSNPIALRRGIE KASEAIVKELLASAKDVETKDQIAATATISAADPEVGEKIAEALDKVGQDGVVTVEDNNK FGLDLDFTEGMRFDKGYISPYFVTNAEDQTAVLEDPYILLTSGKVSSQQDIVHVAELVMK SGKPLLIIAEDVDGEALPTLVLNKIRGTFNTVAVKAPGFGDRRKAMLRDMAILTGAQVVS DDLGLKLDSIDASVFGHAAKVIVSKDETTIVSGAGSKEDVEARVAQIRAEIENTDSDYDR EKLQERLAKLAGGVAVIKVGAATEVEAKERKHRIEDAVRNAKAAIEEGLLPGGGVALVQA AAKVEKSAAIADLKGEEATGAAIVFRAVEAPIKQIAQNSGVSGDVVLNKVRELPEGQGFN AATNAYEDLMAAGVTDPVKVTRSALQNAASIAGLFLTTEAVVANKPEKPAAAPAGGAEMG Y |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCTACCGTTTTGGCTCAGTCTTTGGTTCACGAAGGCTTAAAGAACGTTGTTGCTGGAAGC AATCCAATTGCTCTTCGCAGGGGCATTGAAAAGGCTTCCGAGGCAATTGTTAAGGAATTG CTTGCATCTGCGAAAGATGTTGAAACCAAGGATCAGATTGCTGCTACTGCTACTATTTCT GCAGCCGATCCAGAAGTTGGCGAAAAGATTGCAGAAGCTCTAGATAAGGTTGGCCAAGAC GGTGTTGTTACTGTTGAAGACAACAACAAGTTTGGTCTTGATTTGGACTTTACCGAAGGT ATGCGTTTTGATAAGGGCTATATTTCCCCTTACTTTGTAACCAATGCAGAAGATCAGACT GCTGTTTTGGAAGACCCATACATTTTGCTCACTTCTGGTAAGGTTTCTAGCCAGCAAGAC ATTGTTCATGTTGCTGAACTTGTTATGAAGTCTGGAAAGCCATTGCTTATTATTGCAGAA GATGTTGATGGCGAAGCTTTGCCAACGCTTGTTCTTAACAAGATTCGTGGCACTTTCAAC ACTGTAGCTGTT |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN TVAV |