RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b26728 |
| Chaperonin Group: | I |
| Deposit Date: | 2014-06-30 |
| Type: | ref |
| Type strain?: | no |
| Genus: | Gardnerella |
| Species: | sp. |
| Strain: | JCP7659 |
| Lineage: | root; cellular organisms; Bacteria; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella |
| Original ID: | (Genome sp. 3) |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | ATJQ01000044 |
| Peptide Genbank Accession: | EPI55200 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | Reference genome for the Human Microbiome Project. Genome species 3 in Vaneechoutte et al. 2019 |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAAAGATTATTGCCTATGAAGAGGATGCCCGCCAGGGTATGCTTGCTGGTCTTGAT AAGCTTGCAAATACAGTAAAGGTCACTCTTGGACCAAAGGGTCGTAACGTAGTTCTAGAT AAGTCTTACGGCGCTCCAACAATCACTAATGATGGCGTTTCAATCGCTAAAGAGATTGAC CTTGAAGACCCATACGAGCGTATTGGTGCTGAATTAGTTAAGGAAGTTGCTAAGAAGACT GATGACGTTGCAGGCGATGGAACTACAACCGCTACCGTTTTGGCTCAGTCTTTAGTTCAC GAAGGCTTAAAGAATGTTGTTGCAGGAAGCAATCCAATTGCTCTTCGCCGCGGCATTGAA AAAGCTTCCGAAGCAATTGTTAAGGAATTGCTTGCGTCTGCTAAAGATGTTGAAACAAAG GATCAAATCGCTGCTACTGCTACGATTTCTGCTGCCGACCCAGAAGTTGGCGAAAAGATT GCAGAAGCTCTAGATAAGGTTGGTCAAGACGGCGTTGTTACTGTTGAAGACAACAACAAG TTTGGTCTTGATTTGGACTTTACAGAAGGCATGCGCTTTGATAAGGGTTACATTTCTCCT TACTTTGTAACTAACGCAGAAGATCAGACTGCTGTTTTGGAAGATCCATACATTTTGCTC ACTTCTGGCAAGGTTTCTAGCCAGCAAGACATTGTTCATGTTGCAGAACTTGTTATGAAG TCTGGTAAGCCATTGCTTATTATTGCGGAAGATGTTGATGGCGAAGCTTTGCCAACTCTT GTTCTTAACAAGATTCGTGGCACTTTCAACACTGTAGCTGTTAAGGCTCCAGGCTTTGGC GATCGTCGCAAGGCAATGTTGCAAGATATGGCAATTTTGACTGGCGCTCAGGTTGTTTCT GACGACCTTGGCTTAAAGCTTGATTCTATCGATGCATCTGTGTTTGGTCATGCATCTAAG GTGATTGTTTCTAAGGATGAAACAACTATTGTTTCTGGTGCTGGCTCTAAGGAAGACGTT GAGGCTCGTGTTGCTCAGATTCGCGGCGAAATCGAAAATACCGATTCCGATTACGATCGC GAAAAGCTTCAGGAGCGTCTTGCAAAGCTTGCTGGTGGAGTTGCCGTTATTAAGGTTGGC GCTGCTACAGAAGTAGAAGCCAAGGAGCGCAAGCATCGCATTGAAGATGCAGTGCGTAAC GCTAAGGCTGCAATCGAAGAGGGCTTGCTCCCAGGTGGTGGCGTTGCTCTTGTTCAAGCT GCTGCAAAGGTTGAGAAGTCTGCCGAAGTCGCAAATCTTAAGGGCGAAGAAGCTACTGGC GCTGCAATCGTGTTCCGCGCTGTAGAAGCTCCAATCAAGCAGATTGCTCAAAATAGCGGT GTTTCTGGAGATGTTGTTCTTAACAAGGTTCGCGAGCTTCCAGAAGGCCAAGGCTTTAAC GCTGCAACCAACGCTTACGAAGATTTGATGGCTGCTGGCGTTACCGACCCAGTTAAGGTA ACTCGTTCTGCTCTACAGAATGCTGCTTCTATTGCTGGTTTGTTCTTAACAACCGAAGCT GTTGTTGCAAATAAGCCAGAAAAGCCAGCTGCAGCTCCTGCAGGCGGCGCAGAGATGGGC TACTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKIIAYEEDARQGMLAGLDKLANTVKVTLGPKGRNVVLDKSYGAPTITNDGVSIAKEID LEDPYERIGAELVKEVAKKTDDVAGDGTTTATVLAQSLVHEGLKNVVAGSNPIALRRGIE KASEAIVKELLASAKDVETKDQIAATATISAADPEVGEKIAEALDKVGQDGVVTVEDNNK FGLDLDFTEGMRFDKGYISPYFVTNAEDQTAVLEDPYILLTSGKVSSQQDIVHVAELVMK SGKPLLIIAEDVDGEALPTLVLNKIRGTFNTVAVKAPGFGDRRKAMLQDMAILTGAQVVS DDLGLKLDSIDASVFGHASKVIVSKDETTIVSGAGSKEDVEARVAQIRGEIENTDSDYDR EKLQERLAKLAGGVAVIKVGAATEVEAKERKHRIEDAVRNAKAAIEEGLLPGGGVALVQA AAKVEKSAEVANLKGEEATGAAIVFRAVEAPIKQIAQNSGVSGDVVLNKVRELPEGQGFN AATNAYEDLMAAGVTDPVKVTRSALQNAASIAGLFLTTEAVVANKPEKPAAAPAGGAEMG Y |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCTACCGTTTTGGCTCAGTCTTTAGTTCACGAAGGCTTAAAGAATGTTGTTGCAGGAAGC AATCCAATTGCTCTTCGCCGCGGCATTGAAAAAGCTTCCGAAGCAATTGTTAAGGAATTG CTTGCGTCTGCTAAAGATGTTGAAACAAAGGATCAAATCGCTGCTACTGCTACGATTTCT GCTGCCGACCCAGAAGTTGGCGAAAAGATTGCAGAAGCTCTAGATAAGGTTGGTCAAGAC GGCGTTGTTACTGTTGAAGACAACAACAAGTTTGGTCTTGATTTGGACTTTACAGAAGGC ATGCGCTTTGATAAGGGTTACATTTCTCCTTACTTTGTAACTAACGCAGAAGATCAGACT GCTGTTTTGGAAGATCCATACATTTTGCTCACTTCTGGCAAGGTTTCTAGCCAGCAAGAC ATTGTTCATGTTGCAGAACTTGTTATGAAGTCTGGTAAGCCATTGCTTATTATTGCGGAA GATGTTGATGGCGAAGCTTTGCCAACTCTTGTTCTTAACAAGATTCGTGGCACTTTCAAC ACTGTAGCTGTT |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN TVAV |