RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b26724 |
| Chaperonin Group: | I |
| Deposit Date: | 2014-06-30 |
| Type: | ref |
| Type strain?: | no |
| Genus: | Gardnerella |
| Species: | piotii |
| Strain: | JCP8070 |
| Lineage: | root; cellular organisms; Bacteria; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | ATJK01000006 |
| Peptide Genbank Accession: | EPI61039 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | Reference genome for the Human Microbiome Project. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAAAGATTATTGCCTATGAAGAGGATGCCCGCCAGGGTATGCTTGCTGGTCTTGAT AAGCTTGCAAATACAGTAAAGGTCACTCTTGGACCAAAGGGTCGTAACGTAGTTCTAGAT AAGTCTTACGGCGCTCCAACAATCACCAATGATGGCGTTTCAATCGCTAAAGAGATTGAT CTTGAAGATCCATACGAGCGCATTGGTGCTGAGTTAGTTAAGGAAGTTGCTAAGAAGACT GATGACGTTGCAGGCGACGGCACTACAACCGCTACCGTTTTGGCTCAGTCTTTGGTGCAC GAAGGCTTAAAGAATGTTGTTGCAGGAAGCAATCCAATTGCTCTTCGCCGCGGCATTGAA AAAGCTTCCGAAGCAATTGTTAAGGAATTGCTCGCATCTGCTAAAGACGTTGAAACGAAG GATCAAATCGCCGCTACTGCTACGATTTCTGCTGCCGACCCAGAAGTTGGCGAAAAGATT GCTGAGGCTCTAGATAAGGTTGGCCAAGATGGCGTTGTTACTGTTGAAGACAACAACAAG TTTGGTCTTGATTTGGACTTTACAGAAGGTATGCGCTTCGATAAGGGTTACATTTCTCCT TACTTTGTAACTAACGCAGAAGATCAGACTGCTGTTTTGGAAGACCCATACATCTTGCTC ACTTCTGGCAAGGTTTCTAGCCAGCAAGACATTGTTCATGTTGCAGAACTTGTTATGAAG TCTGGTAAGCCATTGCTTATTATTGCAGAAGACGTTGATGGCGAAGCTTTGCCAACTCTT GTTCTTAACAAGATTCGTGGCACTTTCAACACTGTAGCTGTTAAGGCTCCAGGCTTTGGT GATCGTCGTAAGGCAATGCTTCAAGATATGGCAATTTTGACTGGTGCTCAAGTTGTTTCT GATGATCTTGGCTTAAAGCTTGATTCTATCGATGCATCTGTGTTTGGTCACGCATCTAAG GTGATTGTTTCTAAGGATGAAACAACTATCGTTTCTGGTGCTGGTTCTAAGGAAGACGTT GAGGCTCGTGTTGCTCAAATTCGCGCAGAGATTGAGAACACTGATTCCGATTACGATCGC GAAAAGCTTCAGGAGCGTCTTGCAAAGCTTGCTGGTGGCGTTGCTGTTATTAAGGTTGGT GCTGCTACAGAAGTAGAAGCCAAGGAGCGCAAGCATCGCATTGAAGACGCAGTGCGTAAT GCTAAAGCTGCAATTGAAGAGGGCTTGCTCCCAGGTGGTGGCGTTGCTCTTGTTCAAGCT GCTGCAAAGGTTGAGAAGTCTCAAGAAATCGCAAATCTTAAGGGCGAAGAAGCTACTGGT GCTGCAATCGTGTTCCGCGCTGTAGAAGCTCCAATCAAGCAGATTGCTCAAAATAGCGGT GTTTCTGGAGATGTTGTTCTTAACAAGGTTCGCGAGCTTCCAGAAGGCCAAGGCTTTAAC GCTGCAACTAACGCTTACGAAGATTTGATGGCTGCTGGCGTTACCGACCCAGTTAAGGTG ACTCGTTCTGCTCTACAGAATGCCGCTTCTATTGCTGGTTTGTTCTTAACAACCGAAGCT GTTGTTGCTAACAAGCCAGAAAAGCCAGCTGCAGCTCCAGCTGGCGGCGCAGAAATGGGC TACTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKIIAYEEDARQGMLAGLDKLANTVKVTLGPKGRNVVLDKSYGAPTITNDGVSIAKEID LEDPYERIGAELVKEVAKKTDDVAGDGTTTATVLAQSLVHEGLKNVVAGSNPIALRRGIE KASEAIVKELLASAKDVETKDQIAATATISAADPEVGEKIAEALDKVGQDGVVTVEDNNK FGLDLDFTEGMRFDKGYISPYFVTNAEDQTAVLEDPYILLTSGKVSSQQDIVHVAELVMK SGKPLLIIAEDVDGEALPTLVLNKIRGTFNTVAVKAPGFGDRRKAMLQDMAILTGAQVVS DDLGLKLDSIDASVFGHASKVIVSKDETTIVSGAGSKEDVEARVAQIRAEIENTDSDYDR EKLQERLAKLAGGVAVIKVGAATEVEAKERKHRIEDAVRNAKAAIEEGLLPGGGVALVQA AAKVEKSQEIANLKGEEATGAAIVFRAVEAPIKQIAQNSGVSGDVVLNKVRELPEGQGFN AATNAYEDLMAAGVTDPVKVTRSALQNAASIAGLFLTTEAVVANKPEKPAAAPAGGAEMG Y |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCTACCGTTTTGGCTCAGTCTTTGGTGCACGAAGGCTTAAAGAATGTTGTTGCAGGAAGC AATCCAATTGCTCTTCGCCGCGGCATTGAAAAAGCTTCCGAAGCAATTGTTAAGGAATTG CTCGCATCTGCTAAAGACGTTGAAACGAAGGATCAAATCGCCGCTACTGCTACGATTTCT GCTGCCGACCCAGAAGTTGGCGAAAAGATTGCTGAGGCTCTAGATAAGGTTGGCCAAGAT GGCGTTGTTACTGTTGAAGACAACAACAAGTTTGGTCTTGATTTGGACTTTACAGAAGGT ATGCGCTTCGATAAGGGTTACATTTCTCCTTACTTTGTAACTAACGCAGAAGATCAGACT GCTGTTTTGGAAGACCCATACATCTTGCTCACTTCTGGCAAGGTTTCTAGCCAGCAAGAC ATTGTTCATGTTGCAGAACTTGTTATGAAGTCTGGTAAGCCATTGCTTATTATTGCAGAA GACGTTGATGGCGAAGCTTTGCCAACTCTTGTTCTTAACAAGATTCGTGGCACTTTCAAC ACTGTAGCTGTT |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN TVAV |