/var/www/html/cpndb/fasta_results/b15673.fasta# /data/www/cpndb/fasta35 -E 200 -Q -m 6 -b 20 -d 20 -z 2 -H /data/www/cpndb/fasta_results/b15673 /data/www/cpndb/blastDBs/reference_a_nut
<pre>
FASTA searches a protein or DNA sequence data bank
 version 35.03 Feb. 18, 2008
Please cite:
 W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

</pre>
Query: /data/www/cpndb/fasta_results/b15673
<pre>
  1>>>b15673 555 nt - 555 nt
Library: /data/www/cpndb/blastDBs/reference_a_nut 10433008 residues in 18820 sequences

10433008 residues in 18820 sequences
Statistics: MLE_cen statistics: Lambda= 0.0032;  K=4.123e-05 (cen=941)
Algorithm: FASTA (3.5 Sept 2006) [optimized]
Parameters: +5/-4 matrix (5:-4) ktup: 6
 join: 51, opt: 36, open/ext: -12/-4, width:  16
 Scan time:  2.130
</pre>
<p>
<hr>
<p>
<p><pre>

The best scores are:                                      opt bits E(18820)
<a onClick="window.open('getRecord.php?id=b29103',
                                'cpndb_record'); return false;" href="getRecord.php?id=b29103" target=_"blank">b29103</a> NZ_MIEC01000179 Yersinia pestis subsp.  ( 555) [f] 2775 27.3      36 <A HREF="#b29103">align</A>
<a onClick="window.open('getRecord.php?id=b3194',
                                'cpndb_record'); return false;" href="getRecord.php?id=b3194" target=_"blank">b3194</a> NC_004088 Yersinia pestis KIM            ( 555) [f] 2775 27.3      36 <A HREF="#b3194">align</A>
<a onClick="window.open('getRecord.php?id=b29104',
                                'cpndb_record'); return false;" href="getRecord.php?id=b29104" target=_"blank">b29104</a> NZ_MIEB01000171 Yersinia pestis subsp.  ( 555) [f] 2775 27.3      36 <A HREF="#b29104">align</A>
<a onClick="window.open('getRecord.php?id=b28073',
                                'cpndb_record'); return false;" href="getRecord.php?id=b28073" target=_"blank">b28073</a> NZ_AXDG01000013 Yersinia  pestis  113   ( 555) [f] 2775 27.3      36 <A HREF="#b28073">align</A>
<a onClick="window.open('getRecord.php?id=b15880',
                                'cpndb_record'); return false;" href="getRecord.php?id=b15880" target=_"blank">b15880</a> NZ_ADDC01000001 Yersinia pestis KIM D27 ( 555) [f] 2775 27.3      36 <A HREF="#b15880">align</A>
<a onClick="window.open('getRecord.php?id=b7749',
                                'cpndb_record'); return false;" href="getRecord.php?id=b7749" target=_"blank">b7749</a> NC_010159 Yersinia pestis Angola         ( 555) [f] 2775 27.3      36 <A HREF="#b7749">align</A>
<a onClick="window.open('getRecord.php?id=b10144',
                                'cpndb_record'); return false;" href="getRecord.php?id=b10144" target=_"blank">b10144</a> CP000668 Yersinia pestis Pestoides F    ( 555) [f] 2775 27.3      36 <A HREF="#b10144">align</A>
<a onClick="window.open('getRecord.php?id=b7750',
                                'cpndb_record'); return false;" href="getRecord.php?id=b7750" target=_"blank">b7750</a> NC_009708 Yersinia pseudotuberculosis IP ( 555) [f] 2775 27.3      36 <A HREF="#b7750">align</A>
<a onClick="window.open('getRecord.php?id=b1197',
                                'cpndb_record'); return false;" href="getRecord.php?id=b1197" target=_"blank">b1197</a> AB064590 Yersinia pseudotuberculosis     ( 555) [f] 2775 27.3      36 <A HREF="#b1197">align</A>
<a onClick="window.open('getRecord.php?id=b1260',
                                'cpndb_record'); return false;" href="getRecord.php?id=b1260" target=_"blank">b1260</a> AY044106 Yersinia pseudotuberculosis     ( 555) [f] 2775 27.3      36 <A HREF="#b1260">align</A>
<a onClick="window.open('getRecord.php?id=b29105',
                                'cpndb_record'); return false;" href="getRecord.php?id=b29105" target=_"blank">b29105</a> NZ_MIED01000022 Yersinia pestis subsp.  ( 555) [f] 2775 27.3      36 <A HREF="#b29105">align</A>
<a onClick="window.open('getRecord.php?id=b10803',
                                'cpndb_record'); return false;" href="getRecord.php?id=b10803" target=_"blank">b10803</a> NZ_AAYT01000001 Yersinia pestis biovar  ( 555) [f] 2775 27.3      36 <A HREF="#b10803">align</A>
<a onClick="window.open('getRecord.php?id=b5022',
                                'cpndb_record'); return false;" href="getRecord.php?id=b5022" target=_"blank">b5022</a> NC_005810 Yersinia pestis biovar Mediaev ( 555) [f] 2775 27.3      36 <A HREF="#b5022">align</A>
<a onClick="window.open('getRecord.php?id=b1196',
                                'cpndb_record'); return false;" href="getRecord.php?id=b1196" target=_"blank">b1196</a> AB064592 Yersinia pestis                 ( 555) [f] 2775 27.3      36 <A HREF="#b1196">align</A>
<a onClick="window.open('getRecord.php?id=b27260',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27260" target=_"blank">b27260</a> NZ_ADPG01000757 Yersinia pestis 42013   ( 555) [f] 2775 27.3      36 <A HREF="#b27260">align</A>
<a onClick="window.open('getRecord.php?id=b28370',
                                'cpndb_record'); return false;" href="getRecord.php?id=b28370" target=_"blank">b28370</a> AXDF01000013 Yersinia  pestis  9        ( 555) [f] 2775 27.3      36 <A HREF="#b28370">align</A>
<a onClick="window.open('getRecord.php?id=b10999',
                                'cpndb_record'); return false;" href="getRecord.php?id=b10999" target=_"blank">b10999</a> CP000950 Yersinia pseudotuberculosis YP ( 555) [f] 2775 27.3      36 <A HREF="#b10999">align</A>
<a onClick="window.open('getRecord.php?id=b12010',
                                'cpndb_record'); return false;" href="getRecord.php?id=b12010" target=_"blank">b12010</a> NC_010634 Yersinia pseudotuberculosis P ( 555) [f] 2775 27.3      36 <A HREF="#b12010">align</A>
<a onClick="window.open('getRecord.php?id=b18500',
                                'cpndb_record'); return false;" href="getRecord.php?id=b18500" target=_"blank">b18500</a> CP001608 Yersinia pestis biovar Medieva ( 555) [f] 2775 27.3      36 <A HREF="#b18500">align</A>
<a onClick="window.open('getRecord.php?id=b9339',
                                'cpndb_record'); return false;" href="getRecord.php?id=b9339" target=_"blank">b9339</a> AE017042 Yersinia pestis biovar Microtus ( 555) [f] 2775 27.3      36 <A HREF="#b9339">align</A>
</pre><p><hr><p>

>>>b15673, 555 nt vs /data/www/cpndb/blastDBs/reference_a_nut library

<A name=b29103>
<pre>
>><a onClick="window.open('getRecord.php?id=b29103',
                                'cpndb_record'); return false;" href="getRecord.php?id=b29103" target=_"blank">b29103</a> NZ_MIEC01000179 Yersinia pestis subsp. microtus  (555 nt)
 initn: 2775 init1: 2775 opt: 2775  Z-score: 94.2  bits: 27.3 E():   36
banded Smith-Waterman score: 2775; 100.0% identity (100.0% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b15673 GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b29103 GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b15673 AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b29103 AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b15673 AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b29103 AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15673 GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b29103 GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b15673 GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b29103 GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15673 GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b29103 GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b15673 TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b29103 TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b15673 GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b29103 GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15673 GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b29103 GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
              490       500       510       520       530       540

              550     
b15673 AAAGTTGCAGCGGTT
       :::::::::::::::
b29103 AAAGTTGCAGCGGTT
              550     

</pre>
<hr>
<A name=b3194>
<pre>
>><a onClick="window.open('getRecord.php?id=b3194',
                                'cpndb_record'); return false;" href="getRecord.php?id=b3194" target=_"blank">b3194</a> NC_004088 Yersinia pestis KIM                     (555 nt)
 initn: 2775 init1: 2775 opt: 2775  Z-score: 94.2  bits: 27.3 E():   36
banded Smith-Waterman score: 2775; 100.0% identity (100.0% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b15673 GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b3194  GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b15673 AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b3194  AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b15673 AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b3194  AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15673 GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b3194  GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b15673 GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b3194  GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15673 GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b3194  GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b15673 TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b3194  TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b15673 GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b3194  GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15673 GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b3194  GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
              490       500       510       520       530       540

              550     
b15673 AAAGTTGCAGCGGTT
       :::::::::::::::
b3194  AAAGTTGCAGCGGTT
              550     

</pre>
<hr>
<A name=b29104>
<pre>
>><a onClick="window.open('getRecord.php?id=b29104',
                                'cpndb_record'); return false;" href="getRecord.php?id=b29104" target=_"blank">b29104</a> NZ_MIEB01000171 Yersinia pestis subsp. microtus  (555 nt)
 initn: 2775 init1: 2775 opt: 2775  Z-score: 94.2  bits: 27.3 E():   36
banded Smith-Waterman score: 2775; 100.0% identity (100.0% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b15673 GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b29104 GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b15673 AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b29104 AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b15673 AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b29104 AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15673 GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b29104 GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b15673 GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b29104 GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15673 GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b29104 GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b15673 TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b29104 TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b15673 GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b29104 GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15673 GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b29104 GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
              490       500       510       520       530       540

              550     
b15673 AAAGTTGCAGCGGTT
       :::::::::::::::
b29104 AAAGTTGCAGCGGTT
              550     

</pre>
<hr>
<A name=b28073>
<pre>
>><a onClick="window.open('getRecord.php?id=b28073',
                                'cpndb_record'); return false;" href="getRecord.php?id=b28073" target=_"blank">b28073</a> NZ_AXDG01000013 Yersinia  pestis  113            (555 nt)
 initn: 2775 init1: 2775 opt: 2775  Z-score: 94.2  bits: 27.3 E():   36
banded Smith-Waterman score: 2775; 100.0% identity (100.0% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b15673 GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28073 GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b15673 AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28073 AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b15673 AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28073 AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15673 GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28073 GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b15673 GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28073 GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15673 GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28073 GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b15673 TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28073 TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b15673 GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28073 GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15673 GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28073 GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
              490       500       510       520       530       540

              550     
b15673 AAAGTTGCAGCGGTT
       :::::::::::::::
b28073 AAAGTTGCAGCGGTT
              550     

</pre>
<hr>
<A name=b15880>
<pre>
>><a onClick="window.open('getRecord.php?id=b15880',
                                'cpndb_record'); return false;" href="getRecord.php?id=b15880" target=_"blank">b15880</a> NZ_ADDC01000001 Yersinia pestis KIM D27          (555 nt)
 initn: 2775 init1: 2775 opt: 2775  Z-score: 94.2  bits: 27.3 E():   36
banded Smith-Waterman score: 2775; 100.0% identity (100.0% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b15673 GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b15880 GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b15673 AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b15880 AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b15673 AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b15880 AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15673 GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b15880 GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b15673 GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b15880 GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15673 GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b15880 GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b15673 TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b15880 TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b15673 GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b15880 GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15673 GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b15880 GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
              490       500       510       520       530       540

              550     
b15673 AAAGTTGCAGCGGTT
       :::::::::::::::
b15880 AAAGTTGCAGCGGTT
              550     

</pre>
<hr>
<A name=b7749>
<pre>
>><a onClick="window.open('getRecord.php?id=b7749',
                                'cpndb_record'); return false;" href="getRecord.php?id=b7749" target=_"blank">b7749</a> NC_010159 Yersinia pestis Angola                  (555 nt)
 initn: 2775 init1: 2775 opt: 2775  Z-score: 94.2  bits: 27.3 E():   36
banded Smith-Waterman score: 2775; 100.0% identity (100.0% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b15673 GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b7749  GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b15673 AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b7749  AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b15673 AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b7749  AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15673 GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b7749  GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b15673 GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b7749  GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15673 GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b7749  GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b15673 TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b7749  TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b15673 GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b7749  GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15673 GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b7749  GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
              490       500       510       520       530       540

              550     
b15673 AAAGTTGCAGCGGTT
       :::::::::::::::
b7749  AAAGTTGCAGCGGTT
              550     

</pre>
<hr>
<A name=b10144>
<pre>
>><a onClick="window.open('getRecord.php?id=b10144',
                                'cpndb_record'); return false;" href="getRecord.php?id=b10144" target=_"blank">b10144</a> CP000668 Yersinia pestis Pestoides F             (555 nt)
 initn: 2775 init1: 2775 opt: 2775  Z-score: 94.2  bits: 27.3 E():   36
banded Smith-Waterman score: 2775; 100.0% identity (100.0% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b15673 GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10144 GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b15673 AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10144 AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b15673 AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10144 AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15673 GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10144 GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b15673 GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10144 GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15673 GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10144 GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b15673 TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10144 TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b15673 GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10144 GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15673 GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10144 GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
              490       500       510       520       530       540

              550     
b15673 AAAGTTGCAGCGGTT
       :::::::::::::::
b10144 AAAGTTGCAGCGGTT
              550     

</pre>
<hr>
<A name=b7750>
<pre>
>><a onClick="window.open('getRecord.php?id=b7750',
                                'cpndb_record'); return false;" href="getRecord.php?id=b7750" target=_"blank">b7750</a> NC_009708 Yersinia pseudotuberculosis IP 31758 (  (555 nt)
 initn: 2775 init1: 2775 opt: 2775  Z-score: 94.2  bits: 27.3 E():   36
banded Smith-Waterman score: 2775; 100.0% identity (100.0% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b15673 GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b7750  GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b15673 AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b7750  AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b15673 AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b7750  AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15673 GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b7750  GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b15673 GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b7750  GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15673 GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b7750  GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b15673 TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b7750  TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b15673 GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b7750  GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15673 GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b7750  GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
              490       500       510       520       530       540

              550     
b15673 AAAGTTGCAGCGGTT
       :::::::::::::::
b7750  AAAGTTGCAGCGGTT
              550     

</pre>
<hr>
<A name=b1197>
<pre>
>><a onClick="window.open('getRecord.php?id=b1197',
                                'cpndb_record'); return false;" href="getRecord.php?id=b1197" target=_"blank">b1197</a> AB064590 Yersinia pseudotuberculosis              (555 nt)
 initn: 2775 init1: 2775 opt: 2775  Z-score: 94.2  bits: 27.3 E():   36
banded Smith-Waterman score: 2775; 100.0% identity (100.0% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b15673 GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1197  GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b15673 AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1197  AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b15673 AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1197  AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15673 GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1197  GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b15673 GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1197  GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15673 GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1197  GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b15673 TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1197  TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b15673 GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1197  GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15673 GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1197  GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
              490       500       510       520       530       540

              550     
b15673 AAAGTTGCAGCGGTT
       :::::::::::::::
b1197  AAAGTTGCAGCGGTT
              550     

</pre>
<hr>
<A name=b1260>
<pre>
>><a onClick="window.open('getRecord.php?id=b1260',
                                'cpndb_record'); return false;" href="getRecord.php?id=b1260" target=_"blank">b1260</a> AY044106 Yersinia pseudotuberculosis              (555 nt)
 initn: 2775 init1: 2775 opt: 2775  Z-score: 94.2  bits: 27.3 E():   36
banded Smith-Waterman score: 2775; 100.0% identity (100.0% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b15673 GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1260  GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b15673 AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1260  AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b15673 AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1260  AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15673 GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1260  GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b15673 GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1260  GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15673 GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1260  GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b15673 TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1260  TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b15673 GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1260  GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15673 GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1260  GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
              490       500       510       520       530       540

              550     
b15673 AAAGTTGCAGCGGTT
       :::::::::::::::
b1260  AAAGTTGCAGCGGTT
              550     

</pre>
<hr>
<A name=b29105>
<pre>
>><a onClick="window.open('getRecord.php?id=b29105',
                                'cpndb_record'); return false;" href="getRecord.php?id=b29105" target=_"blank">b29105</a> NZ_MIED01000022 Yersinia pestis subsp. microtus  (555 nt)
 initn: 2775 init1: 2775 opt: 2775  Z-score: 94.2  bits: 27.3 E():   36
banded Smith-Waterman score: 2775; 100.0% identity (100.0% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b15673 GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b29105 GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b15673 AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b29105 AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b15673 AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b29105 AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15673 GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b29105 GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b15673 GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b29105 GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15673 GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b29105 GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b15673 TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b29105 TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b15673 GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b29105 GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15673 GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b29105 GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
              490       500       510       520       530       540

              550     
b15673 AAAGTTGCAGCGGTT
       :::::::::::::::
b29105 AAAGTTGCAGCGGTT
              550     

</pre>
<hr>
<A name=b10803>
<pre>
>><a onClick="window.open('getRecord.php?id=b10803',
                                'cpndb_record'); return false;" href="getRecord.php?id=b10803" target=_"blank">b10803</a> NZ_AAYT01000001 Yersinia pestis biovar Mediaeva  (555 nt)
 initn: 2775 init1: 2775 opt: 2775  Z-score: 94.2  bits: 27.3 E():   36
banded Smith-Waterman score: 2775; 100.0% identity (100.0% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b15673 GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10803 GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b15673 AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10803 AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b15673 AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10803 AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15673 GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10803 GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b15673 GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10803 GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15673 GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10803 GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b15673 TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10803 TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b15673 GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10803 GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15673 GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10803 GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
              490       500       510       520       530       540

              550     
b15673 AAAGTTGCAGCGGTT
       :::::::::::::::
b10803 AAAGTTGCAGCGGTT
              550     

</pre>
<hr>
<A name=b5022>
<pre>
>><a onClick="window.open('getRecord.php?id=b5022',
                                'cpndb_record'); return false;" href="getRecord.php?id=b5022" target=_"blank">b5022</a> NC_005810 Yersinia pestis biovar Mediaevails str  (555 nt)
 initn: 2775 init1: 2775 opt: 2775  Z-score: 94.2  bits: 27.3 E():   36
banded Smith-Waterman score: 2775; 100.0% identity (100.0% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b15673 GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b5022  GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b15673 AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b5022  AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b15673 AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b5022  AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15673 GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b5022  GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b15673 GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b5022  GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15673 GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b5022  GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b15673 TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b5022  TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b15673 GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b5022  GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15673 GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b5022  GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
              490       500       510       520       530       540

              550     
b15673 AAAGTTGCAGCGGTT
       :::::::::::::::
b5022  AAAGTTGCAGCGGTT
              550     

</pre>
<hr>
<A name=b1196>
<pre>
>><a onClick="window.open('getRecord.php?id=b1196',
                                'cpndb_record'); return false;" href="getRecord.php?id=b1196" target=_"blank">b1196</a> AB064592 Yersinia pestis                          (555 nt)
 initn: 2775 init1: 2775 opt: 2775  Z-score: 94.2  bits: 27.3 E():   36
banded Smith-Waterman score: 2775; 100.0% identity (100.0% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b15673 GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1196  GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b15673 AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1196  AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b15673 AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1196  AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15673 GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1196  GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b15673 GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1196  GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15673 GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1196  GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b15673 TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1196  TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b15673 GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1196  GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15673 GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1196  GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
              490       500       510       520       530       540

              550     
b15673 AAAGTTGCAGCGGTT
       :::::::::::::::
b1196  AAAGTTGCAGCGGTT
              550     

</pre>
<hr>
<A name=b27260>
<pre>
>><a onClick="window.open('getRecord.php?id=b27260',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27260" target=_"blank">b27260</a> NZ_ADPG01000757 Yersinia pestis 42013            (555 nt)
 initn: 2775 init1: 2775 opt: 2775  Z-score: 94.2  bits: 27.3 E():   36
banded Smith-Waterman score: 2775; 100.0% identity (100.0% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b15673 GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27260 GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b15673 AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27260 AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b15673 AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27260 AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15673 GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27260 GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b15673 GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27260 GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15673 GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27260 GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b15673 TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27260 TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b15673 GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27260 GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15673 GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27260 GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
              490       500       510       520       530       540

              550     
b15673 AAAGTTGCAGCGGTT
       :::::::::::::::
b27260 AAAGTTGCAGCGGTT
              550     

</pre>
<hr>
<A name=b28370>
<pre>
>><a onClick="window.open('getRecord.php?id=b28370',
                                'cpndb_record'); return false;" href="getRecord.php?id=b28370" target=_"blank">b28370</a> AXDF01000013 Yersinia  pestis  9                 (555 nt)
 initn: 2775 init1: 2775 opt: 2775  Z-score: 94.2  bits: 27.3 E():   36
banded Smith-Waterman score: 2775; 100.0% identity (100.0% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b15673 GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28370 GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b15673 AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28370 AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b15673 AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28370 AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15673 GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28370 GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b15673 GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28370 GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15673 GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28370 GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b15673 TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28370 TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b15673 GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28370 GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15673 GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28370 GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
              490       500       510       520       530       540

              550     
b15673 AAAGTTGCAGCGGTT
       :::::::::::::::
b28370 AAAGTTGCAGCGGTT
              550     

</pre>
<hr>
<A name=b10999>
<pre>
>><a onClick="window.open('getRecord.php?id=b10999',
                                'cpndb_record'); return false;" href="getRecord.php?id=b10999" target=_"blank">b10999</a> CP000950 Yersinia pseudotuberculosis YPIII       (555 nt)
 initn: 2775 init1: 2775 opt: 2775  Z-score: 94.2  bits: 27.3 E():   36
banded Smith-Waterman score: 2775; 100.0% identity (100.0% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b15673 GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10999 GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b15673 AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10999 AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b15673 AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10999 AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15673 GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10999 GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b15673 GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10999 GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15673 GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10999 GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b15673 TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10999 TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b15673 GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10999 GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15673 GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10999 GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
              490       500       510       520       530       540

              550     
b15673 AAAGTTGCAGCGGTT
       :::::::::::::::
b10999 AAAGTTGCAGCGGTT
              550     

</pre>
<hr>
<A name=b12010>
<pre>
>><a onClick="window.open('getRecord.php?id=b12010',
                                'cpndb_record'); return false;" href="getRecord.php?id=b12010" target=_"blank">b12010</a> NC_010634 Yersinia pseudotuberculosis PB1/+      (555 nt)
 initn: 2775 init1: 2775 opt: 2775  Z-score: 94.2  bits: 27.3 E():   36
banded Smith-Waterman score: 2775; 100.0% identity (100.0% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b15673 GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b12010 GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b15673 AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b12010 AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b15673 AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b12010 AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15673 GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b12010 GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b15673 GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b12010 GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15673 GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b12010 GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b15673 TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b12010 TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b15673 GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b12010 GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15673 GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b12010 GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
              490       500       510       520       530       540

              550     
b15673 AAAGTTGCAGCGGTT
       :::::::::::::::
b12010 AAAGTTGCAGCGGTT
              550     

</pre>
<hr>
<A name=b18500>
<pre>
>><a onClick="window.open('getRecord.php?id=b18500',
                                'cpndb_record'); return false;" href="getRecord.php?id=b18500" target=_"blank">b18500</a> CP001608 Yersinia pestis biovar Medievalis str.  (555 nt)
 initn: 2775 init1: 2775 opt: 2775  Z-score: 94.2  bits: 27.3 E():   36
banded Smith-Waterman score: 2775; 100.0% identity (100.0% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b15673 GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18500 GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b15673 AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18500 AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b15673 AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18500 AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15673 GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18500 GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b15673 GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18500 GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15673 GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18500 GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b15673 TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18500 TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b15673 GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18500 GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15673 GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18500 GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
              490       500       510       520       530       540

              550     
b15673 AAAGTTGCAGCGGTT
       :::::::::::::::
b18500 AAAGTTGCAGCGGTT
              550     

</pre>
<hr>
<A name=b9339>
<pre>
>><a onClick="window.open('getRecord.php?id=b9339',
                                'cpndb_record'); return false;" href="getRecord.php?id=b9339" target=_"blank">b9339</a> AE017042 Yersinia pestis biovar Microtus str. 91  (555 nt)
 initn: 2775 init1: 2775 opt: 2775  Z-score: 94.2  bits: 27.3 E():   36
banded Smith-Waterman score: 2775; 100.0% identity (100.0% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b15673 GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b9339  GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b15673 AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b9339  AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b15673 AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b9339  AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b15673 GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b9339  GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b15673 GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b9339  GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15673 GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b9339  GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b15673 TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b9339  TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b15673 GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b9339  GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b15673 GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b9339  GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
              490       500       510       520       530       540

              550     
b15673 AAAGTTGCAGCGGTT
       :::::::::::::::
b9339  AAAGTTGCAGCGGTT
              550     

</pre>
<hr>
<p><pre>


555 residues in 1 query   sequences
10433008 residues in 18820 library sequences
 Scomplib [35.03]
 start: Mon Jul 22 03:20:57 2024 done: Mon Jul 22 03:20:59 2024
 Total Scan time:  2.130 Total Display time:  0.010

Function used was FASTA [version 35.03 Feb. 18, 2008]
</pre>