RECORD DETAILS

Add Record To Cart - Printer-friendly version - Close Window
Chaperonin ID: b9339
Chaperonin Group: I
Deposit Date: 2006-08-14
Type: ref
Type strain?: no
Genus: Yersinia
Species: pestis
Strain: biovar Microtus str. 91001
Lineage: root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia
Original ID: -
CUTC ID: -
Nucleotide Genbank Accession: AE017042
Peptide Genbank Accession: AAS60776
Best FASTA Match: -
Date of FASTA search: -
FASTA identity %: -
Best BLASTP Match: -
Date of BLASTP search: -
BLASTP identity %: -
Source: Genbank
Notes: Proposed new biovar. This strain is avirulent in humans. From complete genome sequence.
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB |
ATGGCAGCTAAAGACGTAAAATTCGGTAACGACGCTCGCATTAAAATGCTACGCGGCGTA
AACATCCTTGCTGATGCAGTGAAAGTGACTCTGGGCCCTAAAGGCCGTAACGTAGTTCTG
GATAAGTCTTTCGGTTCTCCAACGATCACTAAAGACGGTGTTTCTGTTGCACGTGAAATC
GAACTGGAAGACAAGTTCGAGAACATGGGCGCACAGATGGTTAAAGAAGTTGCCTCTAAA
GCAAATGATGCTGCGGGTGACGGTACCACGACTGCAACAGTATTGGCTCAATCCATCATC
ACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATGAACCCAATGGATCTGAAGCGCGGCATC
GACAAAGCCGTTATCGCAGCGGTAGAAGAGCTGAAAAAACTGTCTGTACCTTGCTCTGAT
TCCAAAGCGATTGCTCAGGTCGGTACCATCTCTGCAAACTCCGACTCAACCGTTGGCGAA
CTGATCGCTCAAGCGATGGAAAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGAAGGT
TCAGGCCTGCAAGACGAGTTGGACGTTGTAGAAGGTATGCAGTTCGATCGCGGCTACCTG
TCTCCTTACTTCATCAATAAACCAGAAACTGGCTCTATTGAACTTGAAAGCCCATTCATT
CTGTTGGCTGACAAGAAAATCTCTAACATCCGTGAAATGCTGCCAGTTCTGGAAGCCGTA
GCGAAAGCCGGCAAGCCACTGCTGATCATTGCAGAAGACGTTGAAGGCGAAGCCCTGGCG
ACTCTGGTAGTGAACACCATGCGCGGTATCGTTAAAGTTGCAGCGGTTAAAGCACCTGGC
TTCGGCGACCGTCGTAAAGCGATGCTGCAAGACATCGCGACCCTGACTGCGGGTACTGTT
ATCTCTGAAGAGATCGGTCTGGAACTGGAAAAAACTACTCTGGAAGATCTGGGTCAGGCG
AAACGTGTTGTTATCAACAAAGACACCACCATCATTATTGATGGCGTAGGCGATGAAGCG
GCAATCCAAGGCCGTGTGGCTCAGATTCGTCAGCAGATTGAAGATGCCACTTCTGACTAC
GACAAAGAAAAACTGCAAGAGCGTGTTGCTAAACTGGCTGGCGGCGTTGCCGTTATCAAA
GTGGGCGCCGCAACTGAAGTTGAAATGAAAGAGAAGAAAGCACGCGTTGAAGATGCTCTG
CATGCAACTCGTGCCGCAGTAGAAGAAGGCGTCGTAGCGGGTGGTGGTGTTGCACTGATT
CGTGCAGCTCACGCTATCGCTGGCCTGAAAGGCGATAACGAAGACCAGAACGTGGGTATT
AAAGTGGCTCTGCGTGCGATGGAATCTCCACTGCGTCAGATCGTGGTTAACGCGGGTGAA
GAAGCCTCTGTTATCGCGAACAAAGTTAAAGCGGGTGAAGGTAGCTTCGGTTACAACGCT
TATACTGAAGAATACGGCGACATGATCGCGATGGGTATCTTGGATCCAACTAAAGTGACG
CGTTCTGCTCTGCAGTACGCAGCCTCTATTGCTGGTCTGATGATTACCACCGAGTGCATG
GTTACTGACCTGCCACGTGATGACAAAGGTGCTGATATGGGCGCTGGCGGCATGGGTGGT
ATGGGTGGTATGGGCGGCATGATGTAA
Full Peptide Sequence:
BLAST this sequence:
cpnDB |
MAAKDVKFGNDARIKMLRGVNILADAVKVTLGPKGRNVVLDKSFGSPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGI
DKAVIAAVEELKKLSVPCSDSKAIAQVGTISANSDSTVGELIAQAMEKVGKEGVITVEEG
SGLQDELDVVEGMQFDRGYLSPYFINKPETGSIELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTAGTV
ISEEIGLELEKTTLEDLGQAKRVVINKDTTIIIDGVGDEAAIQGRVAQIRQQIEDATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RAAHAIAGLKGDNEDQNVGIKVALRAMESPLRQIVVNAGEEASVIANKVKAGEGSFGYNA
YTEEYGDMIAMGILDPTKVTRSALQYAASIAGLMITTECMVTDLPRDDKGADMGAGGMGG
MGGMGGMM
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB |
GCAACAGTATTGGCTCAATCCATCATCACTGAAGGCCTGAAAGCAGTTGCCGCAGGCATG
AACCCAATGGATCTGAAGCGCGGCATCGACAAAGCCGTTATCGCAGCGGTAGAAGAGCTG
AAAAAACTGTCTGTACCTTGCTCTGATTCCAAAGCGATTGCTCAGGTCGGTACCATCTCT
GCAAACTCCGACTCAACCGTTGGCGAACTGATCGCTCAAGCGATGGAAAAAGTCGGTAAA
GAAGGCGTTATCACCGTTGAAGAAGGTTCAGGCCTGCAAGACGAGTTGGACGTTGTAGAA
GGTATGCAGTTCGATCGCGGCTACCTGTCTCCTTACTTCATCAATAAACCAGAAACTGGC
TCTATTGAACTTGAAAGCCCATTCATTCTGTTGGCTGACAAGAAAATCTCTAACATCCGT
GAAATGCTGCCAGTTCTGGAAGCCGTAGCGAAAGCCGGCAAGCCACTGCTGATCATTGCA
GAAGACGTTGAAGGCGAAGCCCTGGCGACTCTGGTAGTGAACACCATGCGCGGTATCGTT
AAAGTTGCAGCGGTT
Peptide UT Sequence:
BLAST this sequence:
cpnDB |
ATVLAQSIITEGLKAVAAGMNPMDLKRGIDKAVIAAVEELKKLSVPCSDSKAIAQVGTIS
ANSDSTVGELIAQAMEKVGKEGVITVEEGSGLQDELDVVEGMQFDRGYLSPYFINKPETG
SIELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIV
KVAAV