RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b11978 |
| Chaperonin Group: | I |
| Deposit Date: | 2008-04-13 |
| Type: | ref |
| Type strain?: | yes |
| Genus: | Opitutus |
| Species: | terrae |
| Strain: | PB90-1 |
| Lineage: | root; cellular organisms; Bacteria; Chlamydiae/Verrucomicrobia group; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus |
| Original ID: | DSM 11246 |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | CP001032 |
| Peptide Genbank Accession: | ACB75337 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | From whole genome sequence. This organism was isolated from rice paddy soil and has been detected in peat bog soil and other anoxic terrestrial environments. Type strain synonyms PB90-1 = DSM 11246. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCTGCTAAACAACTCCTGTTCGACGAGTCTGCTCGTCAGAAAATCCTTCGCGGCGTC GAGCTGCTCTCGCGCGCGGTGAAGGTCACCCTCGGCCCCAAGGGCCGCAACGTCGTCATC GACAAGAAATTTGGTTCACCGACCGTCACCAAGGACGGCGTGACCGTCGCCAAGGAGGTC GAGCTGCCCGATCCCTACGAGAACATGGGCGCGCAGATGGTGAAGGAAGTCGCTTCCAAG ACGAGCAACGCCGCCGGTGACGGCACCACCACCGCCACCGTGCTCGCGGAGGCCATCTAC AAGGAAGGCCTGAAGAACGTCACGGCCGGCTCGAACCCGGTTTACCTGAAGCGCGGCATC GACAAGGCTGTCGAGGCCGCCGTCACCGAGCTCGCGCGCGTTTCCAAGAAGGTCAACGAC CGCGAGGAAATCCGCCAGGTCGCGACCGTGTCGGCCAACTGGGACGAGACGATCGGCAAC ATCATTGCCGACGCGATGGACAAGGTGGGCAAGGACGGCACGATCACCGTCGAGGAAGCG AAGTCGATCGAGACGACGCTCGACGTGGTCGAGGGCATGCAGTTCGACAAGGGCTACCTG TCGCCGTATTTCGCCACCAACGCGGAAGCGCAGGAAGCGATCCTCGAGGACGCGTACGTT TTGATCCACGAGAAGAAGATCAGCTCGCTGCAGGACCTCCTGCCGCTGCTGCAGACCGTG GCCAAGAGCGGCAAGCCGCTGCTCGTCATCGCTGAGGAAGTCGAAGGCGAAGCGCTCGCC GCCCTCGTGGTGAACAAGATCCGTGGCACGCTGAACGTGTGTGCGGTGAAGGCTCCTGGC TTCGGCGATCGCCGCAAGGCGATGCTCGAGGACATCGCGGTCCTCACCGGCGGCCGCTGC ATCACCGAGGATCTCGGCATCAAGCTCGAGAACGTCCAGGTCAGCGACCTCGGTCGCGCC AAGCGCATCACCGTCGACAAGGAGAACACCACGATCGTCGAGGGTGCGGGCAAGAGCTCC GACATCCAGGGCCGCGTGAAGCAGATCCGTCGTCAGATCGACGAGACCACGTCCGACTAC GATCGCGAGAAGCTCCAGGAACGCCTGGCGAAGCTCGCCGGTGGCGTGGCCGTGATCAAT GTCGGCGCCGCGACCGAGACCGAGATGAAGGAAAAGAAGGCTCGCGTCGAAGACGCGCTG CACGCCACGCGTGCGGCCGTCGAGGAAGGCATCGTCGCAGGCGGTGGCGTGGCGCTCCTG CGCTGCGTCAAGGTCATCGACGCGCTGCAGCTCGAGGGCGACGAGAAGATCGGTTCGCAA ATCGTCCGTCGTGCGGTTGAGCACCCGATCCGGATGCTCTGCCAGAACGCCGGCGTCGAA GGCGCGGTTGTCGTGGGCGAGATTCTCTCGAACAAGGGCAACTACGGCTACAACGTTGCG ACCGACAAGTACGAGGATCTGGTCAAGGCCGGTGTCGTCGACCCGACGAAGGTCACGCGC ACCGCGCTGCAGAACGCCGCGTCCGTCGCCGGCCTGTTGCTCACGACCGAGTGCATGATC ACTGAGATTCCGGAGAAAGAAAAGGCTCCGGCGGGTGGTCCTGGCGCCGGCGGCATGGGC GGAATGGATTACTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKQLLFDESARQKILRGVELLSRAVKVTLGPKGRNVVIDKKFGSPTVTKDGVTVAKEV ELPDPYENMGAQMVKEVASKTSNAAGDGTTTATVLAEAIYKEGLKNVTAGSNPVYLKRGI DKAVEAAVTELARVSKKVNDREEIRQVATVSANWDETIGNIIADAMDKVGKDGTITVEEA KSIETTLDVVEGMQFDKGYLSPYFATNAEAQEAILEDAYVLIHEKKISSLQDLLPLLQTV AKSGKPLLVIAEEVEGEALAALVVNKIRGTLNVCAVKAPGFGDRRKAMLEDIAVLTGGRC ITEDLGIKLENVQVSDLGRAKRITVDKENTTIVEGAGKSSDIQGRVKQIRRQIDETTSDY DREKLQERLAKLAGGVAVINVGAATETEMKEKKARVEDALHATRAAVEEGIVAGGGVALL RCVKVIDALQLEGDEKIGSQIVRRAVEHPIRMLCQNAGVEGAVVVGEILSNKGNYGYNVA TDKYEDLVKAGVVDPTKVTRTALQNAASVAGLLLTTECMITEIPEKEKAPAGGPGAGGMG GMDY |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCCACCGTGCTCGCGGAGGCCATCTACAAGGAAGGCCTGAAGAACGTCACGGCCGGCTCG AACCCGGTTTACCTGAAGCGCGGCATCGACAAGGCTGTCGAGGCCGCCGTCACCGAGCTC GCGCGCGTTTCCAAGAAGGTCAACGACCGCGAGGAAATCCGCCAGGTCGCGACCGTGTCG GCCAACTGGGACGAGACGATCGGCAACATCATTGCCGACGCGATGGACAAGGTGGGCAAG GACGGCACGATCACCGTCGAGGAAGCGAAGTCGATCGAGACGACGCTCGACGTGGTCGAG GGCATGCAGTTCGACAAGGGCTACCTGTCGCCGTATTTCGCCACCAACGCGGAAGCGCAG GAAGCGATCCTCGAGGACGCGTACGTTTTGATCCACGAGAAGAAGATCAGCTCGCTGCAG GACCTCCTGCCGCTGCTGCAGACCGTGGCCAAGAGCGGCAAGCCGCTGCTCGTCATCGCT GAGGAAGTCGAAGGCGAAGCGCTCGCCGCCCTCGTGGTGAACAAGATCCGTGGCACGCTG AACGTGTGTGCGGTG |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAEAIYKEGLKNVTAGSNPVYLKRGIDKAVEAAVTELARVSKKVNDREEIRQVATVS ANWDETIGNIIADAMDKVGKDGTITVEEAKSIETTLDVVEGMQFDKGYLSPYFATNAEAQ EAILEDAYVLIHEKKISSLQDLLPLLQTVAKSGKPLLVIAEEVEGEALAALVVNKIRGTL NVCAV |