Chaperonin ID: | b11978 |
Chaperonin Group: | I |
Deposit Date: | 2008-04-13 |
Type: | ref |
Type strain?: | yes |
Genus: | Opitutus |
Species: | terrae |
Strain: | PB90-1 |
Lineage: | root; cellular organisms; Bacteria; Chlamydiae/Verrucomicrobia group; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus |
Original ID: | DSM 11246 |
CUTC ID: | - |
Nucleotide Genbank Accession: | CP001032 |
Peptide Genbank Accession: | ACB75337 |
Best FASTA Match: | - |
Date of FASTA search: | - |
FASTA identity %: | - |
Best BLASTP Match: | - |
Date of BLASTP search: | - |
BLASTP identity %: | - |
Source: | Genbank |
Notes: | From whole genome sequence. This organism was isolated from rice paddy soil and has been detected in peat bog soil and other anoxic terrestrial environments. Type strain synonyms PB90-1 = DSM 11246. |
Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCTGCTAAACAACTCCTGTTCGACGAGTCTGCTCGTCAGAAAATCCTTCGCGGCGTC GAGCTGCTCTCGCGCGCGGTGAAGGTCACCCTCGGCCCCAAGGGCCGCAACGTCGTCATC GACAAGAAATTTGGTTCACCGACCGTCACCAAGGACGGCGTGACCGTCGCCAAGGAGGTC GAGCTGCCCGATCCCTACGAGAACATGGGCGCGCAGATGGTGAAGGAAGTCGCTTCCAAG ACGAGCAACGCCGCCGGTGACGGCACCACCACCGCCACCGTGCTCGCGGAGGCCATCTAC AAGGAAGGCCTGAAGAACGTCACGGCCGGCTCGAACCCGGTTTACCTGAAGCGCGGCATC GACAAGGCTGTCGAGGCCGCCGTCACCGAGCTCGCGCGCGTTTCCAAGAAGGTCAACGAC CGCGAGGAAATCCGCCAGGTCGCGACCGTGTCGGCCAACTGGGACGAGACGATCGGCAAC ATCATTGCCGACGCGATGGACAAGGTGGGCAAGGACGGCACGATCACCGTCGAGGAAGCG AAGTCGATCGAGACGACGCTCGACGTGGTCGAGGGCATGCAGTTCGACAAGGGCTACCTG TCGCCGTATTTCGCCACCAACGCGGAAGCGCAGGAAGCGATCCTCGAGGACGCGTACGTT TTGATCCACGAGAAGAAGATCAGCTCGCTGCAGGACCTCCTGCCGCTGCTGCAGACCGTG GCCAAGAGCGGCAAGCCGCTGCTCGTCATCGCTGAGGAAGTCGAAGGCGAAGCGCTCGCC GCCCTCGTGGTGAACAAGATCCGTGGCACGCTGAACGTGTGTGCGGTGAAGGCTCCTGGC TTCGGCGATCGCCGCAAGGCGATGCTCGAGGACATCGCGGTCCTCACCGGCGGCCGCTGC ATCACCGAGGATCTCGGCATCAAGCTCGAGAACGTCCAGGTCAGCGACCTCGGTCGCGCC AAGCGCATCACCGTCGACAAGGAGAACACCACGATCGTCGAGGGTGCGGGCAAGAGCTCC GACATCCAGGGCCGCGTGAAGCAGATCCGTCGTCAGATCGACGAGACCACGTCCGACTAC GATCGCGAGAAGCTCCAGGAACGCCTGGCGAAGCTCGCCGGTGGCGTGGCCGTGATCAAT GTCGGCGCCGCGACCGAGACCGAGATGAAGGAAAAGAAGGCTCGCGTCGAAGACGCGCTG CACGCCACGCGTGCGGCCGTCGAGGAAGGCATCGTCGCAGGCGGTGGCGTGGCGCTCCTG CGCTGCGTCAAGGTCATCGACGCGCTGCAGCTCGAGGGCGACGAGAAGATCGGTTCGCAA ATCGTCCGTCGTGCGGTTGAGCACCCGATCCGGATGCTCTGCCAGAACGCCGGCGTCGAA GGCGCGGTTGTCGTGGGCGAGATTCTCTCGAACAAGGGCAACTACGGCTACAACGTTGCG ACCGACAAGTACGAGGATCTGGTCAAGGCCGGTGTCGTCGACCCGACGAAGGTCACGCGC ACCGCGCTGCAGAACGCCGCGTCCGTCGCCGGCCTGTTGCTCACGACCGAGTGCATGATC ACTGAGATTCCGGAGAAAGAAAAGGCTCCGGCGGGTGGTCCTGGCGCCGGCGGCATGGGC GGAATGGATTACTAA |
Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKQLLFDESARQKILRGVELLSRAVKVTLGPKGRNVVIDKKFGSPTVTKDGVTVAKEV ELPDPYENMGAQMVKEVASKTSNAAGDGTTTATVLAEAIYKEGLKNVTAGSNPVYLKRGI DKAVEAAVTELARVSKKVNDREEIRQVATVSANWDETIGNIIADAMDKVGKDGTITVEEA KSIETTLDVVEGMQFDKGYLSPYFATNAEAQEAILEDAYVLIHEKKISSLQDLLPLLQTV AKSGKPLLVIAEEVEGEALAALVVNKIRGTLNVCAVKAPGFGDRRKAMLEDIAVLTGGRC ITEDLGIKLENVQVSDLGRAKRITVDKENTTIVEGAGKSSDIQGRVKQIRRQIDETTSDY DREKLQERLAKLAGGVAVINVGAATETEMKEKKARVEDALHATRAAVEEGIVAGGGVALL RCVKVIDALQLEGDEKIGSQIVRRAVEHPIRMLCQNAGVEGAVVVGEILSNKGNYGYNVA TDKYEDLVKAGVVDPTKVTRTALQNAASVAGLLLTTECMITEIPEKEKAPAGGPGAGGMG GMDY |
Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCCACCGTGCTCGCGGAGGCCATCTACAAGGAAGGCCTGAAGAACGTCACGGCCGGCTCG AACCCGGTTTACCTGAAGCGCGGCATCGACAAGGCTGTCGAGGCCGCCGTCACCGAGCTC GCGCGCGTTTCCAAGAAGGTCAACGACCGCGAGGAAATCCGCCAGGTCGCGACCGTGTCG GCCAACTGGGACGAGACGATCGGCAACATCATTGCCGACGCGATGGACAAGGTGGGCAAG GACGGCACGATCACCGTCGAGGAAGCGAAGTCGATCGAGACGACGCTCGACGTGGTCGAG GGCATGCAGTTCGACAAGGGCTACCTGTCGCCGTATTTCGCCACCAACGCGGAAGCGCAG GAAGCGATCCTCGAGGACGCGTACGTTTTGATCCACGAGAAGAAGATCAGCTCGCTGCAG GACCTCCTGCCGCTGCTGCAGACCGTGGCCAAGAGCGGCAAGCCGCTGCTCGTCATCGCT GAGGAAGTCGAAGGCGAAGCGCTCGCCGCCCTCGTGGTGAACAAGATCCGTGGCACGCTG AACGTGTGTGCGGTG |
Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAEAIYKEGLKNVTAGSNPVYLKRGIDKAVEAAVTELARVSKKVNDREEIRQVATVS ANWDETIGNIIADAMDKVGKDGTITVEEAKSIETTLDVVEGMQFDKGYLSPYFATNAEAQ EAILEDAYVLIHEKKISSLQDLLPLLQTVAKSGKPLLVIAEEVEGEALAALVVNKIRGTL NVCAV |