RECORD DETAILS
Remove Record From Cart - Printer-friendly version - Close Window| Chaperonin ID: | b28196 |
| Chaperonin Group: | I |
| Deposit Date: | 2016-10-29 |
| Type: | ref |
| Type strain?: | yes |
| Genus: | Pseudoflavonifractor |
| Species: | capillosus |
| Strain: | - |
| Lineage: | root; cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Clostridia; Clostridiales; unclassified Clostridiales; Pseudoflavonifractor |
| Original ID: | ATCC 29799 |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | AAXG02000005 |
| Peptide Genbank Accession: | EDN01428 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | Type strain synonyms ATCC 29799= CCUG 15402 A = VPI R2-29-1. Reference genome for the Human Microbiome Project. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCTAAGATTATTTGCTACGGTGAAGAGGCCCGTCACGCTCTGGAGCGGGGCGTGAAC CAGCTGGCCAACACCGTGAAGATCACCATGGGCCCCAAGGGCCGCAACGTGGTGCTGGAC AAGAAGTTCGGCGCTCCCCTGATCACCAACGACGGTGTGACCATCGCCAAGGAGATCGAG CTGGATGACCCCTTTGAGAACATGGGCGCCCAGCTGGTGAAGGAAGTCTCCACCAAGACC AACGACGTGGCCGGCGACGGCACCACCACCGCCACCCTGCTGGCTCAGGCCATCATCCGT GAGGGTCTGAAGAACCTGGCCGCCGGTGCCAACCCCATGGTCATGAAGAAGGGCATCGCC AAGGCTACCGCCGCCGCCATTGAGGCCATCAAGGCCAACAGCCAGAAGGTCAACGGCACC GCCGACATCGCCCGCGTTGGCGCTGTCTCCTCCGGCGACGAGACCATCGGCAAGCTGATT GCCGAGGCCATGGAGAAGGTCAGCCACGACGGCGTCATCACCGTTGAGGAGTCCAAGACT GCCGAGACCTACAGCGAGGTCGTGGAGGGCATGCAGTTCGACCGTGGCTACATCACCCCC TACATGGTCACCGACACCGAGAAGATGGAGGCCGTTCTGGACGACGCCATCATCCTCATC ACCGACAAGAAGATCTCCAATATCCAGGAGCTGCTGCCCGTTCTGGAGCAGGTTGTCCAG GCCGGCAAGAAGCTGCTGGTCATCGCTGAGGACGTGGAGGGCGAGGCCCTGTCCACCCTC ATCGTCAACAAGCTGCGCGGCACCCTGAACGTGGTGTGCGTCAAGGCCCCCGGCTTCGGC GACCGCCGCAAGGAGATGCTCCAGGATATCGCCACCCTGACCGGCGGCACCGTCATCTCT TCCGAGGTGGGTCTGGAGCTGAAGGAGGCCACTCTGGAGATGCTGGGCCACGCCCGTCAG GTGAAGGTCTCCAAGGAGAACACCATCATCGTGGACGGCGCCGGCGATGCCGAGGCCATC AAGGCCCGTGTCGGCCAGATCCGCGCTCAGATTGAGACCACCACTTCCGACTACGACCGT GAGAAGCTCCAGGAGCGTCTGGCCAAGATGGCTGGCGGCGTGGCTATCATCCGCGTTGGC GCCGCCACCGAGGTGGAGATGAAGGAGAAGAAGCTCCGCATCGAGGACGCCCTGAACGCC ACCCGCGCCGCTGTGGAAGAGGGCATCGTGGCCGGCGGCGGTACCGCCTATGTCAACGCC GTGCCCGCCGTGGAGAAGCTCCTGGCTGAGACCGAGGGCGACGAGAAGACCGGCGTGCGC ATCATCGCCAAGGCCCTGACCGAGCCCATGCGCCAGATTGCCACCAACGCCGGTATCGAC GGCTCCGTGGTGCTGGAGAACGTGAAGAAGGCCGATAAGGTCGGCTATGGCTTCGACGCC TACAACGAGACCTATGTGGACATGATTTCCTCCGGTATCGTTGACCCCACCAAGGTGACT CGCTCCGCTCTGGAGAACGCGGCCTCCATCGCCGCCACCCTGCTGACCACCGAGTCCCTG GTGGCCGACAAGCCCCAGCCCCCCGCTCCTGCCGCTCCCGCTGCTCCCGACATGGGCGGT ATGTACTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKIICYGEEARHALERGVNQLANTVKITMGPKGRNVVLDKKFGAPLITNDGVTIAKEIE LDDPFENMGAQLVKEVSTKTNDVAGDGTTTATLLAQAIIREGLKNLAAGANPMVMKKGIA KATAAAIEAIKANSQKVNGTADIARVGAVSSGDETIGKLIAEAMEKVSHDGVITVEESKT AETYSEVVEGMQFDRGYITPYMVTDTEKMEAVLDDAIILITDKKISNIQELLPVLEQVVQ AGKKLLVIAEDVEGEALSTLIVNKLRGTLNVVCVKAPGFGDRRKEMLQDIATLTGGTVIS SEVGLELKEATLEMLGHARQVKVSKENTIIVDGAGDAEAIKARVGQIRAQIETTTSDYDR EKLQERLAKMAGGVAIIRVGAATEVEMKEKKLRIEDALNATRAAVEEGIVAGGGTAYVNA VPAVEKLLAETEGDEKTGVRIIAKALTEPMRQIATNAGIDGSVVLENVKKADKVGYGFDA YNETYVDMISSGIVDPTKVTRSALENAASIAATLLTTESLVADKPQPPAPAAPAAPDMGG MY |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCCACCCTGCTGGCTCAGGCCATCATCCGTGAGGGTCTGAAGAACCTGGCCGCCGGTGCC AACCCCATGGTCATGAAGAAGGGCATCGCCAAGGCTACCGCCGCCGCCATTGAGGCCATC AAGGCCAACAGCCAGAAGGTCAACGGCACCGCCGACATCGCCCGCGTTGGCGCTGTCTCC TCCGGCGACGAGACCATCGGCAAGCTGATTGCCGAGGCCATGGAGAAGGTCAGCCACGAC GGCGTCATCACCGTTGAGGAGTCCAAGACTGCCGAGACCTACAGCGAGGTCGTGGAGGGC ATGCAGTTCGACCGTGGCTACATCACCCCCTACATGGTCACCGACACCGAGAAGATGGAG GCCGTTCTGGACGACGCCATCATCCTCATCACCGACAAGAAGATCTCCAATATCCAGGAG CTGCTGCCCGTTCTGGAGCAGGTTGTCCAGGCCGGCAAGAAGCTGCTGGTCATCGCTGAG GACGTGGAGGGCGAGGCCCTGTCCACCCTCATCGTCAACAAGCTGCGCGGCACCCTGAAC GTGGTGTGCGTC |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATLLAQAIIREGLKNLAAGANPMVMKKGIAKATAAAIEAIKANSQKVNGTADIARVGAVS SGDETIGKLIAEAMEKVSHDGVITVEESKTAETYSEVVEGMQFDRGYITPYMVTDTEKME AVLDDAIILITDKKISNIQELLPVLEQVVQAGKKLLVIAEDVEGEALSTLIVNKLRGTLN VVCV |