Chaperonin ID: b28196
Chaperonin Group: I
Deposit Date: 2016-10-29
Type: ref
Type strain?: yes
Genus: Pseudoflavonifractor
Species: capillosus
Strain: -
Lineage: root; cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Clostridia; Clostridiales; unclassified Clostridiales; Pseudoflavonifractor
Original ID: ATCC 29799
CUTC ID: -
Nucleotide Genbank Accession: AAXG02000005
Peptide Genbank Accession: EDN01428
Best FASTA Match: -
Date of FASTA search: -
FASTA identity %: -
Best BLASTP Match: -
Date of BLASTP search: -
BLASTP identity %: -
Source: Genbank
Notes: Type strain synonyms ATCC 29799= CCUG 15402 A = VPI R2-29-1. Reference genome for the Human Microbiome Project.
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB | 		ATGGCTAAGATTATTTGCTACGGTGAAGAGGCCCGTCACGCTCTGGAGCGGGGCGTGAAC
CAGCTGGCCAACACCGTGAAGATCACCATGGGCCCCAAGGGCCGCAACGTGGTGCTGGAC
AAGAAGTTCGGCGCTCCCCTGATCACCAACGACGGTGTGACCATCGCCAAGGAGATCGAG
CTGGATGACCCCTTTGAGAACATGGGCGCCCAGCTGGTGAAGGAAGTCTCCACCAAGACC
AACGACGTGGCCGGCGACGGCACCACCACCGCCACCCTGCTGGCTCAGGCCATCATCCGT
GAGGGTCTGAAGAACCTGGCCGCCGGTGCCAACCCCATGGTCATGAAGAAGGGCATCGCC
AAGGCTACCGCCGCCGCCATTGAGGCCATCAAGGCCAACAGCCAGAAGGTCAACGGCACC
GCCGACATCGCCCGCGTTGGCGCTGTCTCCTCCGGCGACGAGACCATCGGCAAGCTGATT
GCCGAGGCCATGGAGAAGGTCAGCCACGACGGCGTCATCACCGTTGAGGAGTCCAAGACT
GCCGAGACCTACAGCGAGGTCGTGGAGGGCATGCAGTTCGACCGTGGCTACATCACCCCC
TACATGGTCACCGACACCGAGAAGATGGAGGCCGTTCTGGACGACGCCATCATCCTCATC
ACCGACAAGAAGATCTCCAATATCCAGGAGCTGCTGCCCGTTCTGGAGCAGGTTGTCCAG
GCCGGCAAGAAGCTGCTGGTCATCGCTGAGGACGTGGAGGGCGAGGCCCTGTCCACCCTC
ATCGTCAACAAGCTGCGCGGCACCCTGAACGTGGTGTGCGTCAAGGCCCCCGGCTTCGGC
GACCGCCGCAAGGAGATGCTCCAGGATATCGCCACCCTGACCGGCGGCACCGTCATCTCT
TCCGAGGTGGGTCTGGAGCTGAAGGAGGCCACTCTGGAGATGCTGGGCCACGCCCGTCAG
GTGAAGGTCTCCAAGGAGAACACCATCATCGTGGACGGCGCCGGCGATGCCGAGGCCATC
AAGGCCCGTGTCGGCCAGATCCGCGCTCAGATTGAGACCACCACTTCCGACTACGACCGT
GAGAAGCTCCAGGAGCGTCTGGCCAAGATGGCTGGCGGCGTGGCTATCATCCGCGTTGGC
GCCGCCACCGAGGTGGAGATGAAGGAGAAGAAGCTCCGCATCGAGGACGCCCTGAACGCC
ACCCGCGCCGCTGTGGAAGAGGGCATCGTGGCCGGCGGCGGTACCGCCTATGTCAACGCC
GTGCCCGCCGTGGAGAAGCTCCTGGCTGAGACCGAGGGCGACGAGAAGACCGGCGTGCGC
ATCATCGCCAAGGCCCTGACCGAGCCCATGCGCCAGATTGCCACCAACGCCGGTATCGAC
GGCTCCGTGGTGCTGGAGAACGTGAAGAAGGCCGATAAGGTCGGCTATGGCTTCGACGCC
TACAACGAGACCTATGTGGACATGATTTCCTCCGGTATCGTTGACCCCACCAAGGTGACT
CGCTCCGCTCTGGAGAACGCGGCCTCCATCGCCGCCACCCTGCTGACCACCGAGTCCCTG
GTGGCCGACAAGCCCCAGCCCCCCGCTCCTGCCGCTCCCGCTGCTCCCGACATGGGCGGT
ATGTACTAA
Full Peptide Sequence:
BLAST this sequence:
cpnDB | 		MAKIICYGEEARHALERGVNQLANTVKITMGPKGRNVVLDKKFGAPLITNDGVTIAKEIE
LDDPFENMGAQLVKEVSTKTNDVAGDGTTTATLLAQAIIREGLKNLAAGANPMVMKKGIA
KATAAAIEAIKANSQKVNGTADIARVGAVSSGDETIGKLIAEAMEKVSHDGVITVEESKT
AETYSEVVEGMQFDRGYITPYMVTDTEKMEAVLDDAIILITDKKISNIQELLPVLEQVVQ
AGKKLLVIAEDVEGEALSTLIVNKLRGTLNVVCVKAPGFGDRRKEMLQDIATLTGGTVIS
SEVGLELKEATLEMLGHARQVKVSKENTIIVDGAGDAEAIKARVGQIRAQIETTTSDYDR
EKLQERLAKMAGGVAIIRVGAATEVEMKEKKLRIEDALNATRAAVEEGIVAGGGTAYVNA
VPAVEKLLAETEGDEKTGVRIIAKALTEPMRQIATNAGIDGSVVLENVKKADKVGYGFDA
YNETYVDMISSGIVDPTKVTRSALENAASIAATLLTTESLVADKPQPPAPAAPAAPDMGG
MY
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB | 		GCCACCCTGCTGGCTCAGGCCATCATCCGTGAGGGTCTGAAGAACCTGGCCGCCGGTGCC
AACCCCATGGTCATGAAGAAGGGCATCGCCAAGGCTACCGCCGCCGCCATTGAGGCCATC
AAGGCCAACAGCCAGAAGGTCAACGGCACCGCCGACATCGCCCGCGTTGGCGCTGTCTCC
TCCGGCGACGAGACCATCGGCAAGCTGATTGCCGAGGCCATGGAGAAGGTCAGCCACGAC
GGCGTCATCACCGTTGAGGAGTCCAAGACTGCCGAGACCTACAGCGAGGTCGTGGAGGGC
ATGCAGTTCGACCGTGGCTACATCACCCCCTACATGGTCACCGACACCGAGAAGATGGAG
GCCGTTCTGGACGACGCCATCATCCTCATCACCGACAAGAAGATCTCCAATATCCAGGAG
CTGCTGCCCGTTCTGGAGCAGGTTGTCCAGGCCGGCAAGAAGCTGCTGGTCATCGCTGAG
GACGTGGAGGGCGAGGCCCTGTCCACCCTCATCGTCAACAAGCTGCGCGGCACCCTGAAC
GTGGTGTGCGTC
Peptide UT Sequence:
BLAST this sequence:
cpnDB | 		ATLLAQAIIREGLKNLAAGANPMVMKKGIAKATAAAIEAIKANSQKVNGTADIARVGAVS
SGDETIGKLIAEAMEKVSHDGVITVEESKTAETYSEVVEGMQFDRGYITPYMVTDTEKME
AVLDDAIILITDKKISNIQELLPVLEQVVQAGKKLLVIAEDVEGEALSTLIVNKLRGTLN
VVCV