RECORD DETAILS
Remove Record From Cart - Printer-friendly version - Close WindowChaperonin ID: | b21063 |
Chaperonin Group: | I |
Deposit Date: | 2012-10-04 |
Type: | ref |
Type strain?: | yes |
Genus: | Bergeyella |
Species: | zoohelcum |
Strain: | - |
Lineage: | root; cellular organisms; Bacteria; Bacteroidetes/Chlorobi group; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bergeyella |
Original ID: | ATCC 43767 |
CUTC ID: | - |
Nucleotide Genbank Accession: | AGYA01000033 |
Peptide Genbank Accession: | EKB54411 |
Best FASTA Match: | - |
Date of FASTA search: | - |
FASTA identity %: | - |
Best BLASTP Match: | - |
Date of BLASTP search: | - |
BLASTP identity %: | - |
Source: | Genbank |
Notes: | Reference genome for the Human Microbiome Project. Type strain synonyms D658 = ATCC 43767 = CCUG 12568 = CCUG 30535 = CIP 103041 = IFO (now NBRC) 16014 = JCM 21249 = LMG 8351 = LMG 12996 = NCTC 11660. |
Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAAAAGAAATTAAATTTGATATTGAATCAAGAGACGCGTTAAAAAGAGGGGTAGAT GCATTGGCGAATGCAGTAAAAGTAACTTTGGGACCAAAAGGTCGTAATGTAGTGATTGAA AAATCATTCGGAGCTCCGCATGTAACCAAAGACGGAGTTTCCGTAGCGAAAGAAATAGAG CTGGAAGACCGTGTAGAAAATATGGGAGCTCAGATGGTGAAAGAAGTAGCGTCTAAAACC AATGATTTGGCAGGAGACGGAACTACTACCGCTACTGTTTTGGCACAGGCTATCGTTCGT GAGGGACTTAAAAATGTAGCTGCTGGAGCCAACCCAATGGACTTAAAAAGAGGAATTGAC AAAGCCGTTGCTACCGTAGTGGACAACCTAAAATCTCAATCTCAAGAAGTAGGAGCTTCT AACGAAAAAATCAAGCAAGTGGCTTCGGTTTCTGCTAATAACGATGAGGCCATCGGTTCG CTTATCGCAGAGGCGTTTGGAAAAGTAGGTAAAGAGGGCGTTATCACTGTAGAGGAAGCC AAAGGAATTGATACTACCGTAGATGTGGTAGAAGGTATGCAGTTTGATAGAGGGTACCAG TCGCCATATTTCGTAACTAATCCAGAGAAAATGGTAGCAGAGTTGGACAACCCTTACATT CTTTTGGTAGAGAAAAAAATCTCTTCGATGAAAGAATTGTTGCCAGTGCTAGAACCAGTG GCTCAACAAGGAAAATCATTATTGATTATCTCTGAAGAGGTTGAAGGCGAGGCTTTGGCT ACTTTGGTGGTGAACAAATTAAGAGGTTCATTGAAAATCGCAGCCGTAAAAGCACCGGGC TTCGGAGACAGAAGAAAAGCAATGTTGGAAGATATTGCCATTTTGACAGGTGGAACGGTG ATTTCAGAAGAAAGAGGTTTCACGATGGAAAATGCATCTATCGAGCTTTTAGGTAGAGCG GAGAAAGTGTCTATTGATAAAGATAATACCACAATTGTAAACGGTGCAGGAGATGAAGAG CAAATCAAAGGTAGAGTGAACCAAATCAAAGCTCAAATGGAAAGCACGACTTCCGATTAC GACAGAGAAAAACTCCAAGAGCGTTTGGCGAAATTGGCAGGTGGGGTAGCTGTGCTTTAT GTAGGTGCTGCTTCTGAAGTGGAAATGAAAGAGAAAAAAGACCGCGTAGATGATGCCCTA CACGCTACCAGAGCGGCGGTGGAAGAAGGTATCGTAGCAGGAGGGGGTGTTGCGTTGGTA AGAGCCATTAGCTCTTTGGAAAACCTTAGCGGTACCAACCAAGATGAGCAAACGGGTATC AAAATAGTGAAGAGAGCCATTGAAGAGCCATTGAGACAAATCGTAGCGAATGCAGGTGGC GAAGGTTCGGTAATCGTAGCCAAAGTAGCAGAAGGTTCTGGCGACTTCGGGTACAATGCG AAAACCGATGAGTTTGTGAATATGCTAGAAGCGGGTATCATAGATCCTACCAAAGTAACG CGTGTAGCCCTTGAAAATGCGGCTTCTGTAGCAGGAATGCTCCTCACCACCGAGTGCGTA ATCACCGAAATTAAAAAAGACGAACCTGCAATGCCTCCAATGGGCGGCGGAATGCCAGGA ATGATGTAA |
Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKEIKFDIESRDALKRGVDALANAVKVTLGPKGRNVVIEKSFGAPHVTKDGVSVAKEIE LEDRVENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVREGLKNVAAGANPMDLKRGID KAVATVVDNLKSQSQEVGASNEKIKQVASVSANNDEAIGSLIAEAFGKVGKEGVITVEEA KGIDTTVDVVEGMQFDRGYQSPYFVTNPEKMVAELDNPYILLVEKKISSMKELLPVLEPV AQQGKSLLIISEEVEGEALATLVVNKLRGSLKIAAVKAPGFGDRRKAMLEDIAILTGGTV ISEERGFTMENASIELLGRAEKVSIDKDNTTIVNGAGDEEQIKGRVNQIKAQMESTTSDY DREKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALV RAISSLENLSGTNQDEQTGIKIVKRAIEEPLRQIVANAGGEGSVIVAKVAEGSGDFGYNA KTDEFVNMLEAGIIDPTKVTRVALENAASVAGMLLTTECVITEIKKDEPAMPPMGGGMPG MM |
Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCTACTGTTTTGGCACAGGCTATCGTTCGTGAGGGACTTAAAAATGTAGCTGCTGGAGCC AACCCAATGGACTTAAAAAGAGGAATTGACAAAGCCGTTGCTACCGTAGTGGACAACCTA AAATCTCAATCTCAAGAAGTAGGAGCTTCTAACGAAAAAATCAAGCAAGTGGCTTCGGTT TCTGCTAATAACGATGAGGCCATCGGTTCGCTTATCGCAGAGGCGTTTGGAAAAGTAGGT AAAGAGGGCGTTATCACTGTAGAGGAAGCCAAAGGAATTGATACTACCGTAGATGTGGTA GAAGGTATGCAGTTTGATAGAGGGTACCAGTCGCCATATTTCGTAACTAATCCAGAGAAA ATGGTAGCAGAGTTGGACAACCCTTACATTCTTTTGGTAGAGAAAAAAATCTCTTCGATG AAAGAATTGTTGCCAGTGCTAGAACCAGTGGCTCAACAAGGAAAATCATTATTGATTATC TCTGAAGAGGTTGAAGGCGAGGCTTTGGCTACTTTGGTGGTGAACAAATTAAGAGGTTCA TTGAAAATCGCAGCCGTA |
Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIVREGLKNVAAGANPMDLKRGIDKAVATVVDNLKSQSQEVGASNEKIKQVASV SANNDEAIGSLIAEAFGKVGKEGVITVEEAKGIDTTVDVVEGMQFDRGYQSPYFVTNPEK MVAELDNPYILLVEKKISSMKELLPVLEPVAQQGKSLLIISEEVEGEALATLVVNKLRGS LKIAAV |