| Chaperonin ID: | b21063 |
| Chaperonin Group: | I |
| Deposit Date: | 2012-10-04 |
| Type: | ref |
| Type strain?: | yes |
| Genus: | Bergeyella |
| Species: | zoohelcum |
| Strain: | - |
| Lineage: | root; cellular organisms; Bacteria; Bacteroidetes/Chlorobi group; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bergeyella |
| Original ID: | ATCC 43767 |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | AGYA01000033 |
| Peptide Genbank Accession: | EKB54411 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | Reference genome for the Human Microbiome Project. Type strain synonyms D658 = ATCC 43767 = CCUG 12568 = CCUG 30535 = CIP 103041 = IFO (now NBRC) 16014 = JCM 21249 = LMG 8351 = LMG 12996 = NCTC 11660. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAAAAGAAATTAAATTTGATATTGAATCAAGAGACGCGTTAAAAAGAGGGGTAGAT GCATTGGCGAATGCAGTAAAAGTAACTTTGGGACCAAAAGGTCGTAATGTAGTGATTGAA AAATCATTCGGAGCTCCGCATGTAACCAAAGACGGAGTTTCCGTAGCGAAAGAAATAGAG CTGGAAGACCGTGTAGAAAATATGGGAGCTCAGATGGTGAAAGAAGTAGCGTCTAAAACC AATGATTTGGCAGGAGACGGAACTACTACCGCTACTGTTTTGGCACAGGCTATCGTTCGT GAGGGACTTAAAAATGTAGCTGCTGGAGCCAACCCAATGGACTTAAAAAGAGGAATTGAC AAAGCCGTTGCTACCGTAGTGGACAACCTAAAATCTCAATCTCAAGAAGTAGGAGCTTCT AACGAAAAAATCAAGCAAGTGGCTTCGGTTTCTGCTAATAACGATGAGGCCATCGGTTCG CTTATCGCAGAGGCGTTTGGAAAAGTAGGTAAAGAGGGCGTTATCACTGTAGAGGAAGCC AAAGGAATTGATACTACCGTAGATGTGGTAGAAGGTATGCAGTTTGATAGAGGGTACCAG TCGCCATATTTCGTAACTAATCCAGAGAAAATGGTAGCAGAGTTGGACAACCCTTACATT CTTTTGGTAGAGAAAAAAATCTCTTCGATGAAAGAATTGTTGCCAGTGCTAGAACCAGTG GCTCAACAAGGAAAATCATTATTGATTATCTCTGAAGAGGTTGAAGGCGAGGCTTTGGCT ACTTTGGTGGTGAACAAATTAAGAGGTTCATTGAAAATCGCAGCCGTAAAAGCACCGGGC TTCGGAGACAGAAGAAAAGCAATGTTGGAAGATATTGCCATTTTGACAGGTGGAACGGTG ATTTCAGAAGAAAGAGGTTTCACGATGGAAAATGCATCTATCGAGCTTTTAGGTAGAGCG GAGAAAGTGTCTATTGATAAAGATAATACCACAATTGTAAACGGTGCAGGAGATGAAGAG CAAATCAAAGGTAGAGTGAACCAAATCAAAGCTCAAATGGAAAGCACGACTTCCGATTAC GACAGAGAAAAACTCCAAGAGCGTTTGGCGAAATTGGCAGGTGGGGTAGCTGTGCTTTAT GTAGGTGCTGCTTCTGAAGTGGAAATGAAAGAGAAAAAAGACCGCGTAGATGATGCCCTA CACGCTACCAGAGCGGCGGTGGAAGAAGGTATCGTAGCAGGAGGGGGTGTTGCGTTGGTA AGAGCCATTAGCTCTTTGGAAAACCTTAGCGGTACCAACCAAGATGAGCAAACGGGTATC AAAATAGTGAAGAGAGCCATTGAAGAGCCATTGAGACAAATCGTAGCGAATGCAGGTGGC GAAGGTTCGGTAATCGTAGCCAAAGTAGCAGAAGGTTCTGGCGACTTCGGGTACAATGCG AAAACCGATGAGTTTGTGAATATGCTAGAAGCGGGTATCATAGATCCTACCAAAGTAACG CGTGTAGCCCTTGAAAATGCGGCTTCTGTAGCAGGAATGCTCCTCACCACCGAGTGCGTA ATCACCGAAATTAAAAAAGACGAACCTGCAATGCCTCCAATGGGCGGCGGAATGCCAGGA ATGATGTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKEIKFDIESRDALKRGVDALANAVKVTLGPKGRNVVIEKSFGAPHVTKDGVSVAKEIE LEDRVENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVREGLKNVAAGANPMDLKRGID KAVATVVDNLKSQSQEVGASNEKIKQVASVSANNDEAIGSLIAEAFGKVGKEGVITVEEA KGIDTTVDVVEGMQFDRGYQSPYFVTNPEKMVAELDNPYILLVEKKISSMKELLPVLEPV AQQGKSLLIISEEVEGEALATLVVNKLRGSLKIAAVKAPGFGDRRKAMLEDIAILTGGTV ISEERGFTMENASIELLGRAEKVSIDKDNTTIVNGAGDEEQIKGRVNQIKAQMESTTSDY DREKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALV RAISSLENLSGTNQDEQTGIKIVKRAIEEPLRQIVANAGGEGSVIVAKVAEGSGDFGYNA KTDEFVNMLEAGIIDPTKVTRVALENAASVAGMLLTTECVITEIKKDEPAMPPMGGGMPG MM |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCTACTGTTTTGGCACAGGCTATCGTTCGTGAGGGACTTAAAAATGTAGCTGCTGGAGCC AACCCAATGGACTTAAAAAGAGGAATTGACAAAGCCGTTGCTACCGTAGTGGACAACCTA AAATCTCAATCTCAAGAAGTAGGAGCTTCTAACGAAAAAATCAAGCAAGTGGCTTCGGTT TCTGCTAATAACGATGAGGCCATCGGTTCGCTTATCGCAGAGGCGTTTGGAAAAGTAGGT AAAGAGGGCGTTATCACTGTAGAGGAAGCCAAAGGAATTGATACTACCGTAGATGTGGTA GAAGGTATGCAGTTTGATAGAGGGTACCAGTCGCCATATTTCGTAACTAATCCAGAGAAA ATGGTAGCAGAGTTGGACAACCCTTACATTCTTTTGGTAGAGAAAAAAATCTCTTCGATG AAAGAATTGTTGCCAGTGCTAGAACCAGTGGCTCAACAAGGAAAATCATTATTGATTATC TCTGAAGAGGTTGAAGGCGAGGCTTTGGCTACTTTGGTGGTGAACAAATTAAGAGGTTCA TTGAAAATCGCAGCCGTA |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIVREGLKNVAAGANPMDLKRGIDKAVATVVDNLKSQSQEVGASNEKIKQVASV SANNDEAIGSLIAEAFGKVGKEGVITVEEAKGIDTTVDVVEGMQFDRGYQSPYFVTNPEK MVAELDNPYILLVEKKISSMKELLPVLEPVAQQGKSLLIISEEVEGEALATLVVNKLRGS LKIAAV |