RECORD DETAILS
Remove Record From Cart - Printer-friendly version - Close Window| Chaperonin ID: | b16651 |
| Chaperonin Group: | I |
| Deposit Date: | 2010-04-09 |
| Type: | fie |
| Type strain?: | no |
| Genus: | Ruminococcus |
| Species: | sp. |
| Strain: | 18P13 |
| Lineage: | root; cellular organisms; Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | FP929052 |
| Peptide Genbank Accession: | CBL16722 |
| Best FASTA Match: | b26847 Ruminococcus flavefaciens 17 (see fasta results) |
| Date of FASTA search: | 2024-07-22 |
| FASTA identity %: | 79.000 |
| Best BLASTP Match: | b26847 Ruminococcus flavefaciens 17 (see blastp results) |
| Date of BLASTP search: | 2024-07-22 |
| BLASTP identity %: | 87.500 |
| Source: | Genbank |
| Notes: | Cellulolytic bacterium from the human intestine (Robert C & Bernalier-Donadille 2003 FEMS Microbiol Ecol 46:81-89). |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCTAAGCAGATCAAGTACGGCGAAGAAGCAAGAAAGGCACTCCAGGCAGGCATCGAC AGCCTGGCGGATACGGTCAAGATCACACTGGGCCCCAAGGGCAGAAACGTGGTTCTGGAC AAGAAGTTCGGCGCTCCGCTGATCACCAATGACGGCGTGACCATTGCAAAGGAGGTCGAG CTGGAGGATCCCTTTGAGAACATGGGCGCACAACTGGTCAAGGAGGTTGCAACCAAGACC AATGACGCTGCCGGCGACGGCACTACCACTGCCACCCTGCTGGCACAGGCAATGGTTCGG GAAGGCATGAAGAACATTGCAGCAGGCGCAAATCCTATGATCGTCAAGAAGGGCATCCAG AAGGCTGTTGACGCAGCAGTCAACGCCATCAAGGCAAACTCCAAGCCGGTAGAGGGCAGC GCAGACATCGCAAGAGTCGGCACCGTATCCTCCGCAGACGAGAACGTGGGCAAGCTGATT GCCGAGGCAATGGAGAAGGTTTCCACCGATGGCGTCATCACCCTGGAGGAAAGCAAGACC GCAGAAACCTACAGCGAGGTCGTTGAGGGCATGCAGTTTGACCGGGGCTACATCTCCCCC TATATGGTCACTGACGCTGACAAGATGGAAGCAGTTTACGACGACGCTTACATTCTGATT ACCGATAAGAAGATTTCCTCCATCCAGGAGATCCTGCCTCTGCTGGAGCAGGTCGTACAG GCTGGCAAGAAGCTGGTCATCATTGCGGAGGATATGGAGGGCGAAGCGCTCACCACCATC ATCCTCAACAACCTGAGAGGCACCTTCAAGTGTGCTGCTGTCAAGGCACCGGGCTTTGGC GACAGAAGAAAGGAAATGCTGAAGGATATCGCCATCCTCACCGGCGGCGAGGTCATCACC TCCGAGCTGGGTCTGGAGCTGAAGGATACCACCATTGCACAGCTTGGCCGTGCAAAGCAG GTAGTCATCCAGAAGGAGAACACCATCATCGTGGACGGCGCAGGGGCATCCGAGGAGATC AAGGCGCGCATCAGCCAGATCCGCAGCCAGATCGAGACTACAACCTCCGACTTTGACAAG GAAAAGCTCCAGGAGCGTCTGGCAAAGCTGTCCGGCGGCGTAGCTGTCATCAAGGTGGGC GCTGCAACCGAGATCGAGATGAAGGAAAAGAAGCTGAGAATCGAAGACGCTCTGGCTGCT ACCAAGGCTGCTGTTGAGGAAGGCATCGTTGCCGGCGGCGGCACAGCCCTCATCAATGCG ATTCCGGCAGTGGAAAAGCTGCTGCCCAGCCTGGACGGGGACGAAAAGACCGGTGCAAAG ATCATCCTCAAGGCACTGGAGGAACCGGTTCGCCAGATCGCACGGAATGCCGGTCTGGAA GGCAGCGTCATCATCGACAAGATCCGCCGCTCCAGAAAGGTTGGCTACGGCTTTGACGCA TACAACGAAACCTATGTAGATATGATCCCTGCCGGCATCGTAGATCCCACAAAGGTGACC CGTTCCGCATTGCAGAATGCAGCATCCGTTGCAGCAATGGTTCTGACCACCGAGAGTCTG GTTGCAGACATCAAGGAGGAGAATGCAGCAGCTGCTCCCGCAATGCCCGCAGGCGGCATG GGCTTCTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKQIKYGEEARKALQAGIDSLADTVKITLGPKGRNVVLDKKFGAPLITNDGVTIAKEVE LEDPFENMGAQLVKEVATKTNDAAGDGTTTATLLAQAMVREGMKNIAAGANPMIVKKGIQ KAVDAAVNAIKANSKPVEGSADIARVGTVSSADENVGKLIAEAMEKVSTDGVITLEESKT AETYSEVVEGMQFDRGYISPYMVTDADKMEAVYDDAYILITDKKISSIQEILPLLEQVVQ AGKKLVIIAEDMEGEALTTIILNNLRGTFKCAAVKAPGFGDRRKEMLKDIAILTGGEVIT SELGLELKDTTIAQLGRAKQVVIQKENTIIVDGAGASEEIKARISQIRSQIETTTSDFDK EKLQERLAKLSGGVAVIKVGAATEIEMKEKKLRIEDALAATKAAVEEGIVAGGGTALINA IPAVEKLLPSLDGDEKTGAKIILKALEEPVRQIARNAGLEGSVIIDKIRRSRKVGYGFDA YNETYVDMIPAGIVDPTKVTRSALQNAASVAAMVLTTESLVADIKEENAAAAPAMPAGGM GF |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCCACCCTGCTGGCACAGGCAATGGTTCGGGAAGGCATGAAGAACATTGCAGCAGGCGCA AATCCTATGATCGTCAAGAAGGGCATCCAGAAGGCTGTTGACGCAGCAGTCAACGCCATC AAGGCAAACTCCAAGCCGGTAGAGGGCAGCGCAGACATCGCAAGAGTCGGCACCGTATCC TCCGCAGACGAGAACGTGGGCAAGCTGATTGCCGAGGCAATGGAGAAGGTTTCCACCGAT GGCGTCATCACCCTGGAGGAAAGCAAGACCGCAGAAACCTACAGCGAGGTCGTTGAGGGC ATGCAGTTTGACCGGGGCTACATCTCCCCCTATATGGTCACTGACGCTGACAAGATGGAA GCAGTTTACGACGACGCTTACATTCTGATTACCGATAAGAAGATTTCCTCCATCCAGGAG ATCCTGCCTCTGCTGGAGCAGGTCGTACAGGCTGGCAAGAAGCTGGTCATCATTGCGGAG GATATGGAGGGCGAAGCGCTCACCACCATCATCCTCAACAACCTGAGAGGCACCTTCAAG TGTGCTGCTGTC |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATLLAQAMVREGMKNIAAGANPMIVKKGIQKAVDAAVNAIKANSKPVEGSADIARVGTVS SADENVGKLIAEAMEKVSTDGVITLEESKTAETYSEVVEGMQFDRGYISPYMVTDADKME AVYDDAYILITDKKISSIQEILPLLEQVVQAGKKLVIIAEDMEGEALTTIILNNLRGTFK CAAV |