Chaperonin ID: b16651
Chaperonin Group: I
Deposit Date: 2010-04-09
Type: fie
Type strain?: no
Genus: Ruminococcus
Species: sp.
Strain: 18P13
Lineage: root; cellular organisms; Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus
Original ID: -
CUTC ID: -
Nucleotide Genbank Accession: FP929052
Peptide Genbank Accession: CBL16722
Best FASTA Match: b26847 Ruminococcus flavefaciens 17 (see fasta results)
Date of FASTA search: 2024-07-22
FASTA identity %: 79.000
Best BLASTP Match: b26847 Ruminococcus flavefaciens 17 (see blastp results)
Date of BLASTP search: 2024-07-22
BLASTP identity %: 87.500
Source: Genbank
Notes: Cellulolytic bacterium from the human intestine (Robert C & Bernalier-Donadille 2003 FEMS Microbiol Ecol 46:81-89).
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB | 		ATGGCTAAGCAGATCAAGTACGGCGAAGAAGCAAGAAAGGCACTCCAGGCAGGCATCGAC
AGCCTGGCGGATACGGTCAAGATCACACTGGGCCCCAAGGGCAGAAACGTGGTTCTGGAC
AAGAAGTTCGGCGCTCCGCTGATCACCAATGACGGCGTGACCATTGCAAAGGAGGTCGAG
CTGGAGGATCCCTTTGAGAACATGGGCGCACAACTGGTCAAGGAGGTTGCAACCAAGACC
AATGACGCTGCCGGCGACGGCACTACCACTGCCACCCTGCTGGCACAGGCAATGGTTCGG
GAAGGCATGAAGAACATTGCAGCAGGCGCAAATCCTATGATCGTCAAGAAGGGCATCCAG
AAGGCTGTTGACGCAGCAGTCAACGCCATCAAGGCAAACTCCAAGCCGGTAGAGGGCAGC
GCAGACATCGCAAGAGTCGGCACCGTATCCTCCGCAGACGAGAACGTGGGCAAGCTGATT
GCCGAGGCAATGGAGAAGGTTTCCACCGATGGCGTCATCACCCTGGAGGAAAGCAAGACC
GCAGAAACCTACAGCGAGGTCGTTGAGGGCATGCAGTTTGACCGGGGCTACATCTCCCCC
TATATGGTCACTGACGCTGACAAGATGGAAGCAGTTTACGACGACGCTTACATTCTGATT
ACCGATAAGAAGATTTCCTCCATCCAGGAGATCCTGCCTCTGCTGGAGCAGGTCGTACAG
GCTGGCAAGAAGCTGGTCATCATTGCGGAGGATATGGAGGGCGAAGCGCTCACCACCATC
ATCCTCAACAACCTGAGAGGCACCTTCAAGTGTGCTGCTGTCAAGGCACCGGGCTTTGGC
GACAGAAGAAAGGAAATGCTGAAGGATATCGCCATCCTCACCGGCGGCGAGGTCATCACC
TCCGAGCTGGGTCTGGAGCTGAAGGATACCACCATTGCACAGCTTGGCCGTGCAAAGCAG
GTAGTCATCCAGAAGGAGAACACCATCATCGTGGACGGCGCAGGGGCATCCGAGGAGATC
AAGGCGCGCATCAGCCAGATCCGCAGCCAGATCGAGACTACAACCTCCGACTTTGACAAG
GAAAAGCTCCAGGAGCGTCTGGCAAAGCTGTCCGGCGGCGTAGCTGTCATCAAGGTGGGC
GCTGCAACCGAGATCGAGATGAAGGAAAAGAAGCTGAGAATCGAAGACGCTCTGGCTGCT
ACCAAGGCTGCTGTTGAGGAAGGCATCGTTGCCGGCGGCGGCACAGCCCTCATCAATGCG
ATTCCGGCAGTGGAAAAGCTGCTGCCCAGCCTGGACGGGGACGAAAAGACCGGTGCAAAG
ATCATCCTCAAGGCACTGGAGGAACCGGTTCGCCAGATCGCACGGAATGCCGGTCTGGAA
GGCAGCGTCATCATCGACAAGATCCGCCGCTCCAGAAAGGTTGGCTACGGCTTTGACGCA
TACAACGAAACCTATGTAGATATGATCCCTGCCGGCATCGTAGATCCCACAAAGGTGACC
CGTTCCGCATTGCAGAATGCAGCATCCGTTGCAGCAATGGTTCTGACCACCGAGAGTCTG
GTTGCAGACATCAAGGAGGAGAATGCAGCAGCTGCTCCCGCAATGCCCGCAGGCGGCATG
GGCTTCTAA
Full Peptide Sequence:
BLAST this sequence:
cpnDB | 		MAKQIKYGEEARKALQAGIDSLADTVKITLGPKGRNVVLDKKFGAPLITNDGVTIAKEVE
LEDPFENMGAQLVKEVATKTNDAAGDGTTTATLLAQAMVREGMKNIAAGANPMIVKKGIQ
KAVDAAVNAIKANSKPVEGSADIARVGTVSSADENVGKLIAEAMEKVSTDGVITLEESKT
AETYSEVVEGMQFDRGYISPYMVTDADKMEAVYDDAYILITDKKISSIQEILPLLEQVVQ
AGKKLVIIAEDMEGEALTTIILNNLRGTFKCAAVKAPGFGDRRKEMLKDIAILTGGEVIT
SELGLELKDTTIAQLGRAKQVVIQKENTIIVDGAGASEEIKARISQIRSQIETTTSDFDK
EKLQERLAKLSGGVAVIKVGAATEIEMKEKKLRIEDALAATKAAVEEGIVAGGGTALINA
IPAVEKLLPSLDGDEKTGAKIILKALEEPVRQIARNAGLEGSVIIDKIRRSRKVGYGFDA
YNETYVDMIPAGIVDPTKVTRSALQNAASVAAMVLTTESLVADIKEENAAAAPAMPAGGM
GF
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB | 		GCCACCCTGCTGGCACAGGCAATGGTTCGGGAAGGCATGAAGAACATTGCAGCAGGCGCA
AATCCTATGATCGTCAAGAAGGGCATCCAGAAGGCTGTTGACGCAGCAGTCAACGCCATC
AAGGCAAACTCCAAGCCGGTAGAGGGCAGCGCAGACATCGCAAGAGTCGGCACCGTATCC
TCCGCAGACGAGAACGTGGGCAAGCTGATTGCCGAGGCAATGGAGAAGGTTTCCACCGAT
GGCGTCATCACCCTGGAGGAAAGCAAGACCGCAGAAACCTACAGCGAGGTCGTTGAGGGC
ATGCAGTTTGACCGGGGCTACATCTCCCCCTATATGGTCACTGACGCTGACAAGATGGAA
GCAGTTTACGACGACGCTTACATTCTGATTACCGATAAGAAGATTTCCTCCATCCAGGAG
ATCCTGCCTCTGCTGGAGCAGGTCGTACAGGCTGGCAAGAAGCTGGTCATCATTGCGGAG
GATATGGAGGGCGAAGCGCTCACCACCATCATCCTCAACAACCTGAGAGGCACCTTCAAG
TGTGCTGCTGTC
Peptide UT Sequence:
BLAST this sequence:
cpnDB | 		ATLLAQAMVREGMKNIAAGANPMIVKKGIQKAVDAAVNAIKANSKPVEGSADIARVGTVS
SADENVGKLIAEAMEKVSTDGVITLEESKTAETYSEVVEGMQFDRGYISPYMVTDADKME
AVYDDAYILITDKKISSIQEILPLLEQVVQAGKKLVIIAEDMEGEALTTIILNNLRGTFK
CAAV