RECORD DETAILS
Remove Record From Cart - Printer-friendly version - Close Window| Chaperonin ID: | b12029 |
| Chaperonin Group: | I |
| Deposit Date: | 2008-05-25 |
| Type: | cli |
| Type strain?: | no |
| Genus: | Helicobacter |
| Species: | pylori |
| Strain: | Shi470 |
| Lineage: | root; cellular organisms; Bacteria; Proteobacteria; delta/epsilon subdivisions; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | NC_010698 |
| Peptide Genbank Accession: | YP_001909507 |
| Best FASTA Match: | b20622 Helicobacter pylori Shi169 (see fasta results) |
| Date of FASTA search: | 2024-07-22 |
| FASTA identity %: | 100.000 |
| Best BLASTP Match: | Unpublished data. Please contact us if you require more information. |
| Date of BLASTP search: | 2024-07-22 |
| BLASTP identity %: | 100.000 |
| Source: | Genbank |
| Notes: | Helicobacter pylori Shi470 is a clinical isolate from gastric antrum from Amerindian resident of remote Amazonian village of Shimaa, Peru. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAAAAGAAATCAAATTTTCAGATAGCGCAAGAAACCTTTTGTTTGAAGGCGTGAGA CAACTCCATGACGCTGTCAAAGTAACCATGGGGCCAAGAGGTAGGAATGTGTTGATCCAA AAAAGCTATGGCGCTCCAAGCATCACCAAAGACGGCGTGAGCGTGGCTAAAGAGATTGAA TTAAGTTGCCCAGTGGCTAATATGGGTGCTCAACTCGTTAAAGAAGTAGCGAGCAAAACC GCTGATGCTGCCGGCGATGGCACGACCACAGCGACCGTGCTTGCTTATAGCATTTTTAAA GAGGGCTTGAGGAATATCACGGCTGGGGCTAACCCTATTGAAGTGAAACGAGGCATGGAT AAAGCCGCTGAAGCCATTATTAATGAGCTTAAAAAAGCGAGCAAAAAAGTAGGCGGTAAA GAAGAAATCACCCAAGTAGCGACCATTTCTGCAAACTCTGATCACAATATCGGGAAACTC ATCGCTGACGCTATGGAAAAAGTGGGTAAAGACGGCGTGATCACCGTTGAAGAAGCTAAG GGCATTGAAGATGAATTAGATGTCGTAGAGGGCATGCAATTTGATAGAGGCTATCTCTCC CCTTATTTTGTAACAAACGCTGAGAAAATGACCGCTCAATTGGATAACGCTTACATCCTT TTAACGGATAAAAAAATCTCTAGCATGAAAGACATTCTCCCACTACTAGAAAAAACCATG AAAGAGGGCAAACCGCTTTTAATCATCGCTGAAGACATTGAGGGCGAAGCTTTAACGACT CTAGTGGTGAATAAATTAAGAGGCGTGTTGAATATCGCAGCGGTTAAGGCTCCAGGCTTT GGGGACAGAAGAAAAGAAATGCTCAAAGACATCGCTGTTTTAACCGGCGGTCAAGTTATT AGCGAAGAATTAGGCTTGACTTTAGAAAACGCTGAAGTGGAGTTTTTAGGCAAAGCCGGA AGGATTGTGATTGACAAAGACAACACCACGATCGTAGATGGCAAAGGCCATAGCCATGAT GTCAAAGACAGAGTCGCGCAAATCAAAACCCAAATTGCAAGCACGACAAGCGATTATGAC AAAGAAAAATTGCAAGAAAGATTGGCTAAACTCTCTGGCGGTGTGGCTGTGATTAAAGTG GGCGCTGCGAGTGAAGTGGAAATGAAAGAGAAAAAAGACCGGGTTGATGACGCGTTGAGC GCGACTAAAGCGGCTGTTGAAGAAGGCATTGTTATTGGCGGCGGTGCGGCTCTCATTCGT GCGGCTCAAAAAGTGCATTTGAATTTACACGATGATGAAAAAGTGGGCTATGAAATCATC ATGCGCGCCATTAAAGCCCCATTAGCTCAAATCGCTATCAATGCCGGTTATGATGGCGGT GTGGTCGTGAATGAAGTGCAAAAACACGAAGGGCATTTTGGTTTTAACGCTAGCAATGGC AAGTATGTGGATATGTTTAAAGAAGGCATTATTGACCCCTTAAAAGTAGAAAGGATCGCT TTGCAAAATGCGGTTTCGGTTTCAAGCCTGCTTTTAACCACAGAAGCCACCGTGCATGAA ATCAAAGAAGAAAAAGCAACCCCAGCAATGCCTGATATGGGTGGCATGGGCGGTATGGGA GGCATGGGCGGCATGATGTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKEIKFSDSARNLLFEGVRQLHDAVKVTMGPRGRNVLIQKSYGAPSITKDGVSVAKEIE LSCPVANMGAQLVKEVASKTADAAGDGTTTATVLAYSIFKEGLRNITAGANPIEVKRGMD KAAEAIINELKKASKKVGGKEEITQVATISANSDHNIGKLIADAMEKVGKDGVITVEEAK GIEDELDVVEGMQFDRGYLSPYFVTNAEKMTAQLDNAYILLTDKKISSMKDILPLLEKTM KEGKPLLIIAEDIEGEALTTLVVNKLRGVLNIAAVKAPGFGDRRKEMLKDIAVLTGGQVI SEELGLTLENAEVEFLGKAGRIVIDKDNTTIVDGKGHSHDVKDRVAQIKTQIASTTSDYD KEKLQERLAKLSGGVAVIKVGAASEVEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIR AAQKVHLNLHDDEKVGYEIIMRAIKAPLAQIAINAGYDGGVVVNEVQKHEGHFGFNASNG KYVDMFKEGIIDPLKVERIALQNAVSVSSLLLTTEATVHEIKEEKATPAMPDMGGMGGMG GMGGMM |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCGACCGTGCTTGCTTATAGCATTTTTAAAGAGGGCTTGAGGAATATCACGGCTGGGGCT AACCCTATTGAAGTGAAACGAGGCATGGATAAAGCCGCTGAAGCCATTATTAATGAGCTT AAAAAAGCGAGCAAAAAAGTAGGCGGTAAAGAAGAAATCACCCAAGTAGCGACCATTTCT GCAAACTCTGATCACAATATCGGGAAACTCATCGCTGACGCTATGGAAAAAGTGGGTAAA GACGGCGTGATCACCGTTGAAGAAGCTAAGGGCATTGAAGATGAATTAGATGTCGTAGAG GGCATGCAATTTGATAGAGGCTATCTCTCCCCTTATTTTGTAACAAACGCTGAGAAAATG ACCGCTCAATTGGATAACGCTTACATCCTTTTAACGGATAAAAAAATCTCTAGCATGAAA GACATTCTCCCACTACTAGAAAAAACCATGAAAGAGGGCAAACCGCTTTTAATCATCGCT GAAGACATTGAGGGCGAAGCTTTAACGACTCTAGTGGTGAATAAATTAAGAGGCGTGTTG AATATCGCAGCGGTT |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAYSIFKEGLRNITAGANPIEVKRGMDKAAEAIINELKKASKKVGGKEEITQVATIS ANSDHNIGKLIADAMEKVGKDGVITVEEAKGIEDELDVVEGMQFDRGYLSPYFVTNAEKM TAQLDNAYILLTDKKISSMKDILPLLEKTMKEGKPLLIIAEDIEGEALTTLVVNKLRGVL NIAAV |