/var/www/html/cpndb/fasta_results/b7867.fasta# /data/www/cpndb/fasta35 -E 200 -Q -m 6 -b 20 -d 20 -z 2 -H /data/www/cpndb/fasta_results/b7867 /data/www/cpndb/blastDBs/reference_a_nut
<pre>
FASTA searches a protein or DNA sequence data bank
 version 35.03 Feb. 18, 2008
Please cite:
 W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

</pre>
Query: /data/www/cpndb/fasta_results/b7867
<pre>
  1>>>b7867 552 nt - 552 nt
Library: /data/www/cpndb/blastDBs/reference_a_nut 10433008 residues in 18820 sequences

10433008 residues in 18820 sequences
Statistics: MLE_cen statistics: Lambda= 0.0037;  K=3.139e-05 (cen=941)
Algorithm: FASTA (3.5 Sept 2006) [optimized]
Parameters: +5/-4 matrix (5:-4) ktup: 6
 join: 51, opt: 36, open/ext: -12/-4, width:  16
 Scan time:  2.250
</pre>
<p>
<hr>
<p>
<p><pre>

The best scores are:                                      opt bits E(18820)
<a onClick="window.open('getRecord.php?id=b7823',
                                'cpndb_record'); return false;" href="getRecord.php?id=b7823" target=_"blank">b7823</a> AF429648 Lactiplantibacillus plantarum I ( 552) [f] 2260 27.2      38 <A HREF="#b7823">align</A>
<a onClick="window.open('getRecord.php?id=b7831',
                                'cpndb_record'); return false;" href="getRecord.php?id=b7831" target=_"blank">b7831</a> AF429662 Lactiplantibacillus plantarum C ( 552) [f] 2251 27.1      39 <A HREF="#b7831">align</A>
<a onClick="window.open('getRecord.php?id=b23047',
                                'cpndb_record'); return false;" href="getRecord.php?id=b23047" target=_"blank">b23047</a> NC_020229 Lactiplantibacillus plantarum ( 552) [f] 2251 27.1      39 <A HREF="#b23047">align</A>
<a onClick="window.open('getRecord.php?id=b34041',
                                'cpndb_record'); return false;" href="getRecord.php?id=b34041" target=_"blank">b34041</a> NZ_CP032751 Lactiplantibacillus plantar ( 552) [f] 2251 27.1      39 <A HREF="#b34041">align</A>
<a onClick="window.open('getRecord.php?id=b3809',
                                'cpndb_record'); return false;" href="getRecord.php?id=b3809" target=_"blank">b3809</a> NC_004567 Lactiplantibacillus plantarum  ( 552) [f] 2251 27.1      39 <A HREF="#b3809">align</A>
<a onClick="window.open('getRecord.php?id=b27946',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27946" target=_"blank">b27946</a> AVFI01000013 Lactiplantibacillus planta ( 552) [f] 2251 27.1      39 <A HREF="#b27946">align</A>
<a onClick="window.open('getRecord.php?id=b27673',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27673" target=_"blank">b27673</a> NC_021514 Lactiplantibacillus plantarum ( 552) [f] 2242 27.1      41 <A HREF="#b27673">align</A>
<a onClick="window.open('getRecord.php?id=b7824',
                                'cpndb_record'); return false;" href="getRecord.php?id=b7824" target=_"blank">b7824</a> AF429653 Lactiplantibacillus plantarum A ( 552) [f] 2242 27.1      41 <A HREF="#b7824">align</A>
<a onClick="window.open('getRecord.php?id=b13776',
                                'cpndb_record'); return false;" href="getRecord.php?id=b13776" target=_"blank">b13776</a> NZ_ACGZ01000067 Lactiplantibacillus pla ( 552) [f] 2242 27.1      41 <A HREF="#b13776">align</A>
<a onClick="window.open('getRecord.php?id=b26426',
                                'cpndb_record'); return false;" href="getRecord.php?id=b26426" target=_"blank">b26426</a> CP005942 Lactiplantibacillus plantarum  ( 552) [f] 2242 27.1      41 <A HREF="#b26426">align</A>
<a onClick="window.open('getRecord.php?id=b7851',
                                'cpndb_record'); return false;" href="getRecord.php?id=b7851" target=_"blank">b7851</a> AF429688 Lentilactobacillus kefiri ATCC  ( 552) [f] 2224 27.0      44 <A HREF="#b7851">align</A>
<a onClick="window.open('getRecord.php?id=b3331',
                                'cpndb_record'); return false;" href="getRecord.php?id=b3331" target=_"blank">b3331</a> AF405403 Pediococcus acidilactici ATCC 8 ( 552) [f] 2174 26.7      53 <A HREF="#b3331">align</A>
<a onClick="window.open('getRecord.php?id=b7830',
                                'cpndb_record'); return false;" href="getRecord.php?id=b7830" target=_"blank">b7830</a> AF429661 Lactiplantibacillus plantarum A ( 552) [f] 2170 26.7      53 <A HREF="#b7830">align</A>
<a onClick="window.open('getRecord.php?id=b3343',
                                'cpndb_record'); return false;" href="getRecord.php?id=b3343" target=_"blank">b3343</a> AF405415 Pediococcus acidilactici ATCC 2 ( 552) [f] 2169 26.7      54 <A HREF="#b3343">align</A>
<a onClick="window.open('getRecord.php?id=b20083',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20083" target=_"blank">b20083</a> AGKB01000005 Pediococcus acidilactici M ( 552) [f] 2169 26.7      54 <A HREF="#b20083">align</A>
<a onClick="window.open('getRecord.php?id=b21876',
                                'cpndb_record'); return false;" href="getRecord.php?id=b21876" target=_"blank">b21876</a> BANK01000034 Pediococcus lolii NGRI 051 ( 552) [f] 2169 26.7      54 <A HREF="#b21876">align</A>
<a onClick="window.open('getRecord.php?id=b15806',
                                'cpndb_record'); return false;" href="getRecord.php?id=b15806" target=_"blank">b15806</a> GG730085 Pediococcus acidilactici 7_4   ( 552) [f] 2160 26.6      55 <A HREF="#b15806">align</A>
<a onClick="window.open('getRecord.php?id=b26264',
                                'cpndb_record'); return false;" href="getRecord.php?id=b26264" target=_"blank">b26264</a> AQGT01000002 Pediococcus acidilactici D ( 552) [f] 2160 26.6      55 <A HREF="#b26264">align</A>
<a onClick="window.open('getRecord.php?id=b17809',
                                'cpndb_record'); return false;" href="getRecord.php?id=b17809" target=_"blank">b17809</a> NZ_AEEG01000009 Pediococcus acidilactic ( 552) [f] 2160 26.6      55 <A HREF="#b17809">align</A>
<a onClick="window.open('getRecord.php?id=b3341',
                                'cpndb_record'); return false;" href="getRecord.php?id=b3341" target=_"blank">b3341</a> AF405413 Pediococcus acidilactici ATCC 1 ( 552) [f] 2156 26.6      56 <A HREF="#b3341">align</A>
</pre><p><hr><p>

>>>b7867, 552 nt vs /data/www/cpndb/blastDBs/reference_a_nut library

<A name=b7823>
<pre>
>><a onClick="window.open('getRecord.php?id=b7823',
                                'cpndb_record'); return false;" href="getRecord.php?id=b7823" target=_"blank">b7823</a> AF429648 Lactiplantibacillus plantarum I18A       (552 nt)
 initn: 2248 init1: 2248 opt: 2260  Z-score: 93.9  bits: 27.2 E():   38
banded Smith-Waterman score: 2260; 90.0% identity (90.0% similar) in 551 nt overlap (1-551:1-551)
<p>

               10        20        30        40        50        60
b7867  GCAACGGTCTTAACCCAAGCAATCGTTAATGAAGGTATGAAGAACGTTACTGCCGGTGCT
       :::::::::::::: ::: ::::::::::::::::::::::::::::::: :::::::::
b7823  GCAACGGTCTTAACACAATCAATCGTTAATGAAGGTATGAAGAACGTTACGGCCGGTGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b7867  AACCCTGTTGGCATTCGTCGTGGTATTGAAAAGGCTACTGAGACGGCGGTTGACTCATTG
       ::::::::::::::::::::::: :::::: : :::::: ::::::::::::::::::: 
b7823  AACCCTGTTGGCATTCGTCGTGGGATTGAAGAAGCTACTAAGACGGCGGTTGACTCATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b7867  CACACTATGGCACACGAAGTAAAGACTCAGGATGACATTGCGCAAATCGCTTCTGTTTCT
       ::: :::::::::::::::: ::::: :: :: :: :::::::::::::::::::: :::
b7823  CACGCTATGGCACACGAAGTTAAGACGCAAGAAGATATTGCGCAAATCGCTTCTGTATCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b7867  TCTGCTAGTGCAGAAGCTGGTAAGTTGATTGCCGACGCCATGGAAAAGGTTGGTAACGAC
       :: :: :::: :::: ::::::: ::::::::::: ::::::::::: :::::: : :::
b7823  TCAGCAAGTGAAGAAACTGGTAAATTGATTGCCGAAGCCATGGAAAAAGTTGGTCATGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b7867  GGAGTTATCACTATTGAAGAATCTCGTGGAGTTGACACTACCCTAGACGTTGTTGAAGGG
       :: :::::::: ::::::::::: ::::: ::::: :::: : :::::::::::::::::
b7823  GGTGTTATCACGATTGAAGAATCACGTGGTGTTGATACTAGCTTAGACGTTGTTGAAGGG
              250       260       270       280       290       300

              310       320       330       340       350       360
b7867  ATGCAATTCGACCGCGGCTACATGTCACAATACATGGTTACTGACAACGACAAGATGGAA
       ::::::::::::::::::::: : ::::::::::::::::::::::: :: :::::::::
b7823  ATGCAATTCGACCGCGGCTACTTATCACAATACATGGTTACTGACAATGATAAGATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b7867  GCTAACCTTGACAATCCATACATCTTAATTACTGATAAGAAGATTGCCAACATTCAAGAT
       ::  : :::::::::::::: :::::::::::::::::::::::: : ::::::::::::
b7823  GCGGATCTTGACAATCCATATATCTTAATTACTGATAAGAAGATTTCAAACATTCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b7867  ATCTTGCCACTGTTACAATCCATCGTTGAACAAGGCGGCCACTTGTTGATCATTGCTGAT
       ::::: ::::: ::::::::::::::::::::::::   :  ::::::::::::::::::
b7823  ATCTTACCACTATTACAATCCATCGTTGAACAAGGCAAGCCATTGTTGATCATTGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b7867  GACATTACTGGTGAAGCATTGCCAACCTTAGTCTTGAACAAGATGCGTGGTACCTTTAAC
       :::::: :::::::::: :: ::::::::::::::::::::::::::::: :: ::::::
b7823  GACATTTCTGGTGAAGCTTTACCAACCTTAGTCTTGAACAAGATGCGTGGGACGTTTAAC
              490       500       510       520       530       540

              550  
b7867  GTTGTGGCGGTA
       ::::: :: :: 
b7823  GTTGTCGCCGTT
              550  

</pre>
<hr>
<A name=b7831>
<pre>
>><a onClick="window.open('getRecord.php?id=b7831',
                                'cpndb_record'); return false;" href="getRecord.php?id=b7831" target=_"blank">b7831</a> AF429662 Lactiplantibacillus plantarum CCC B1183  (552 nt)
 initn: 2239 init1: 2239 opt: 2251  Z-score: 93.6  bits: 27.1 E():   39
banded Smith-Waterman score: 2251; 89.8% identity (89.8% similar) in 551 nt overlap (1-551:1-551)
<p>

               10        20        30        40        50        60
b7867  GCAACGGTCTTAACCCAAGCAATCGTTAATGAAGGTATGAAGAACGTTACTGCCGGTGCT
       ::::::: :::::: ::: ::::::::::::::::::::::::::::::: :::::::::
b7831  GCAACGGCCTTAACACAATCAATCGTTAATGAAGGTATGAAGAACGTTACGGCCGGTGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b7867  AACCCTGTTGGCATTCGTCGTGGTATTGAAAAGGCTACTGAGACGGCGGTTGACTCATTG
       ::::::::::::::::::::::: :::::: : :::::: ::::::::::::::::::: 
b7831  AACCCTGTTGGCATTCGTCGTGGGATTGAAGAAGCTACTAAGACGGCGGTTGACTCATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b7867  CACACTATGGCACACGAAGTAAAGACTCAGGATGACATTGCGCAAATCGCTTCTGTTTCT
       ::: :::::::::::::::: ::::: :: :: :: :::::::::::::::::::: :::
b7831  CACGCTATGGCACACGAAGTTAAGACGCAAGAAGATATTGCGCAAATCGCTTCTGTATCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b7867  TCTGCTAGTGCAGAAGCTGGTAAGTTGATTGCCGACGCCATGGAAAAGGTTGGTAACGAC
       :: :: :::: :::: ::::::: ::::::::::: ::::::::::: :::::: : :::
b7831  TCAGCAAGTGAAGAAACTGGTAAATTGATTGCCGAAGCCATGGAAAAAGTTGGTCATGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b7867  GGAGTTATCACTATTGAAGAATCTCGTGGAGTTGACACTACCCTAGACGTTGTTGAAGGG
       :: :::::::: ::::::::::: ::::: ::::: :::: : :::::::::::::::::
b7831  GGTGTTATCACGATTGAAGAATCACGTGGTGTTGATACTAGCTTAGACGTTGTTGAAGGG
              250       260       270       280       290       300

              310       320       330       340       350       360
b7867  ATGCAATTCGACCGCGGCTACATGTCACAATACATGGTTACTGACAACGACAAGATGGAA
       ::::::::::::::::::::: : ::::::::::::::::::::::: :: :::::::::
b7831  ATGCAATTCGACCGCGGCTACTTATCACAATACATGGTTACTGACAATGATAAGATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b7867  GCTAACCTTGACAATCCATACATCTTAATTACTGATAAGAAGATTGCCAACATTCAAGAT
       ::  : :::::::::::::: :::::::::::::::::::::::: : ::::::::::::
b7831  GCGGATCTTGACAATCCATATATCTTAATTACTGATAAGAAGATTTCAAACATTCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b7867  ATCTTGCCACTGTTACAATCCATCGTTGAACAAGGCGGCCACTTGTTGATCATTGCTGAT
       ::::: ::::: ::::::::::::::::::::::::   :  ::::::::::::::::::
b7831  ATCTTACCACTATTACAATCCATCGTTGAACAAGGCAAGCCATTGTTGATCATTGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b7867  GACATTACTGGTGAAGCATTGCCAACCTTAGTCTTGAACAAGATGCGTGGTACCTTTAAC
       :::::: :::::::::: :: ::::::::::::::::::::::::::::: :: ::::::
b7831  GACATTTCTGGTGAAGCTTTACCAACCTTAGTCTTGAACAAGATGCGTGGGACGTTTAAC
              490       500       510       520       530       540

              550  
b7867  GTTGTGGCGGTA
       ::::: :: :: 
b7831  GTTGTCGCCGTT
              550  

</pre>
<hr>
<A name=b23047>
<pre>
>><a onClick="window.open('getRecord.php?id=b23047',
                                'cpndb_record'); return false;" href="getRecord.php?id=b23047" target=_"blank">b23047</a> NC_020229 Lactiplantibacillus plantarum ZJ316    (552 nt)
 initn: 2239 init1: 2239 opt: 2251  Z-score: 93.6  bits: 27.1 E():   39
banded Smith-Waterman score: 2251; 89.8% identity (89.8% similar) in 551 nt overlap (1-551:1-551)
<p>

               10        20        30        40        50        60
b7867  GCAACGGTCTTAACCCAAGCAATCGTTAATGAAGGTATGAAGAACGTTACTGCCGGTGCT
       :::::::::::::: ::: ::::::::::::::::::::::::::::::: :::::::::
b23047 GCAACGGTCTTAACACAATCAATCGTTAATGAAGGTATGAAGAACGTTACGGCCGGTGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b7867  AACCCTGTTGGCATTCGTCGTGGTATTGAAAAGGCTACTGAGACGGCGGTTGACTCATTG
       ::::::::::::::::::::::: :::::: : :::::: ::::::::::::::::::: 
b23047 AACCCTGTTGGCATTCGTCGTGGGATTGAAGAAGCTACTAAGACGGCGGTTGACTCATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b7867  CACACTATGGCACACGAAGTAAAGACTCAGGATGACATTGCGCAAATCGCTTCTGTTTCT
       ::: :::::::::::::::: ::::: :: :: :: :::::::::::::::::::: :::
b23047 CACGCTATGGCACACGAAGTTAAGACGCAAGAAGATATTGCGCAAATCGCTTCTGTATCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b7867  TCTGCTAGTGCAGAAGCTGGTAAGTTGATTGCCGACGCCATGGAAAAGGTTGGTAACGAC
       :: :: :::: :::: ::::::: ::::::::::: ::::::::::: :::::: : :::
b23047 TCAGCAAGTGAAGAAACTGGTAAATTGATTGCCGAAGCCATGGAAAAAGTTGGTCATGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b7867  GGAGTTATCACTATTGAAGAATCTCGTGGAGTTGACACTACCCTAGACGTTGTTGAAGGG
       :: :::::::: ::::::::::: ::::: ::::: :::: : :::::::::::::::::
b23047 GGTGTTATCACGATTGAAGAATCACGTGGTGTTGATACTAGCTTAGACGTTGTTGAAGGG
              250       260       270       280       290       300

              310       320       330       340       350       360
b7867  ATGCAATTCGACCGCGGCTACATGTCACAATACATGGTTACTGACAACGACAAGATGGAA
       ::::::::::::::::::::: : :::::::::::::::::::: :: :: :::::::::
b23047 ATGCAATTCGACCGCGGCTACTTATCACAATACATGGTTACTGATAATGATAAGATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b7867  GCTAACCTTGACAATCCATACATCTTAATTACTGATAAGAAGATTGCCAACATTCAAGAT
       ::  : :::::::::::::: :::::::::::::::::::::::: : ::::::::::::
b23047 GCGGATCTTGACAATCCATATATCTTAATTACTGATAAGAAGATTTCAAACATTCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b7867  ATCTTGCCACTGTTACAATCCATCGTTGAACAAGGCGGCCACTTGTTGATCATTGCTGAT
       ::::: ::::: ::::::::::::::::::::::::   :  ::::::::::::::::::
b23047 ATCTTACCACTATTACAATCCATCGTTGAACAAGGCAAGCCATTGTTGATCATTGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b7867  GACATTACTGGTGAAGCATTGCCAACCTTAGTCTTGAACAAGATGCGTGGTACCTTTAAC
       :::::: :::::::::: :: ::::::::::::::::::::::::::::: :: ::::::
b23047 GACATTTCTGGTGAAGCTTTACCAACCTTAGTCTTGAACAAGATGCGTGGGACGTTTAAC
              490       500       510       520       530       540

              550  
b7867  GTTGTGGCGGTA
       ::::: :: :: 
b23047 GTTGTCGCCGTT
              550  

</pre>
<hr>
<A name=b34041>
<pre>
>><a onClick="window.open('getRecord.php?id=b34041',
                                'cpndb_record'); return false;" href="getRecord.php?id=b34041" target=_"blank">b34041</a> NZ_CP032751 Lactiplantibacillus plantarum  subs  (552 nt)
 initn: 2239 init1: 2239 opt: 2251  Z-score: 93.6  bits: 27.1 E():   39
banded Smith-Waterman score: 2251; 89.8% identity (89.8% similar) in 551 nt overlap (1-551:1-551)
<p>

               10        20        30        40        50        60
b7867  GCAACGGTCTTAACCCAAGCAATCGTTAATGAAGGTATGAAGAACGTTACTGCCGGTGCT
       :::::::::::::: ::: ::::::::::::::::::::::::::::::: :::::::::
b34041 GCAACGGTCTTAACACAATCAATCGTTAATGAAGGTATGAAGAACGTTACGGCCGGTGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b7867  AACCCTGTTGGCATTCGTCGTGGTATTGAAAAGGCTACTGAGACGGCGGTTGACTCATTG
       ::::::::::::::::::::::: :::::: : :::::: ::::::::::::::::::: 
b34041 AACCCTGTTGGCATTCGTCGTGGGATTGAAGAAGCTACTAAGACGGCGGTTGACTCATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b7867  CACACTATGGCACACGAAGTAAAGACTCAGGATGACATTGCGCAAATCGCTTCTGTTTCT
       ::: :::::::::::::::: ::::: :: :: :: :::::::::::::::::::: :::
b34041 CACGCTATGGCACACGAAGTTAAGACGCAAGAAGATATTGCGCAAATCGCTTCTGTATCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b7867  TCTGCTAGTGCAGAAGCTGGTAAGTTGATTGCCGACGCCATGGAAAAGGTTGGTAACGAC
       :: :: :::: :::: ::::::: ::::::::::: ::::::::::: :::::: : :::
b34041 TCAGCAAGTGAAGAAACTGGTAAATTGATTGCCGAAGCCATGGAAAAAGTTGGTCATGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b7867  GGAGTTATCACTATTGAAGAATCTCGTGGAGTTGACACTACCCTAGACGTTGTTGAAGGG
       :: :::::::: ::::::::::: ::::: ::::: :::: : :::::::::::::::::
b34041 GGTGTTATCACGATTGAAGAATCACGTGGTGTTGATACTAGCTTAGACGTTGTTGAAGGG
              250       260       270       280       290       300

              310       320       330       340       350       360
b7867  ATGCAATTCGACCGCGGCTACATGTCACAATACATGGTTACTGACAACGACAAGATGGAA
       ::::::::::::::::::::: : ::::::::::::::::::::::: :: :::::::::
b34041 ATGCAATTCGACCGCGGCTACTTATCACAATACATGGTTACTGACAATGATAAGATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b7867  GCTAACCTTGACAATCCATACATCTTAATTACTGATAAGAAGATTGCCAACATTCAAGAT
       ::  : :::::::::::::: :::::::::::::::::::::::: : ::::::::::::
b34041 GCGGATCTTGACAATCCATATATCTTAATTACTGATAAGAAGATTTCAAACATTCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b7867  ATCTTGCCACTGTTACAATCCATCGTTGAACAAGGCGGCCACTTGTTGATCATTGCTGAT
       ::::: ::::: ::::::::::::::::::::::::   :  ::::::::::::::::::
b34041 ATCTTACCACTATTACAATCCATCGTTGAACAAGGCAAGCCATTGTTGATCATTGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b7867  GACATTACTGGTGAAGCATTGCCAACCTTAGTCTTGAACAAGATGCGTGGTACCTTTAAC
       :::::: :::::::::: :: :::::::: :::::::::::::::::::: :: ::::::
b34041 GACATTTCTGGTGAAGCTTTACCAACCTTGGTCTTGAACAAGATGCGTGGGACGTTTAAC
              490       500       510       520       530       540

              550  
b7867  GTTGTGGCGGTA
       ::::: :: :: 
b34041 GTTGTCGCCGTT
              550  

</pre>
<hr>
<A name=b3809>
<pre>
>><a onClick="window.open('getRecord.php?id=b3809',
                                'cpndb_record'); return false;" href="getRecord.php?id=b3809" target=_"blank">b3809</a> NC_004567 Lactiplantibacillus plantarum WCFS1 NC  (552 nt)
 initn: 2239 init1: 2239 opt: 2251  Z-score: 93.6  bits: 27.1 E():   39
banded Smith-Waterman score: 2251; 89.8% identity (89.8% similar) in 551 nt overlap (1-551:1-551)
<p>

               10        20        30        40        50        60
b7867  GCAACGGTCTTAACCCAAGCAATCGTTAATGAAGGTATGAAGAACGTTACTGCCGGTGCT
       :::::::::::::: ::: ::::::::::::::::::::::::::::::: :::::::::
b3809  GCAACGGTCTTAACACAATCAATCGTTAATGAAGGTATGAAGAACGTTACGGCCGGTGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b7867  AACCCTGTTGGCATTCGTCGTGGTATTGAAAAGGCTACTGAGACGGCGGTTGACTCATTG
       ::::::::::::::::::::::: :::::: : :::::: ::::::::::::::::::: 
b3809  AACCCTGTTGGCATTCGTCGTGGGATTGAAGAAGCTACTAAGACGGCGGTTGACTCATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b7867  CACACTATGGCACACGAAGTAAAGACTCAGGATGACATTGCGCAAATCGCTTCTGTTTCT
       ::: :::::::::::::::: ::::: :: :: :: :::::::::::::::::::: :::
b3809  CACGCTATGGCACACGAAGTTAAGACGCAAGAAGATATTGCGCAAATCGCTTCTGTATCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b7867  TCTGCTAGTGCAGAAGCTGGTAAGTTGATTGCCGACGCCATGGAAAAGGTTGGTAACGAC
       :: :: :::: :::: ::::::: ::::::::::: ::::::::::: :::::: : :::
b3809  TCAGCAAGTGAAGAAACTGGTAAATTGATTGCCGAAGCCATGGAAAAAGTTGGTCATGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b7867  GGAGTTATCACTATTGAAGAATCTCGTGGAGTTGACACTACCCTAGACGTTGTTGAAGGG
       :: :::::::: ::::::::::: ::::: ::::: :::: : :::::::::::::::::
b3809  GGTGTTATCACGATTGAAGAATCACGTGGTGTTGATACTAGCTTAGACGTTGTTGAAGGG
              250       260       270       280       290       300

              310       320       330       340       350       360
b7867  ATGCAATTCGACCGCGGCTACATGTCACAATACATGGTTACTGACAACGACAAGATGGAA
       ::::::::::::::::::::: : :::::::::::::::::::: :: :: :::::::::
b3809  ATGCAATTCGACCGCGGCTACTTATCACAATACATGGTTACTGATAATGATAAGATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b7867  GCTAACCTTGACAATCCATACATCTTAATTACTGATAAGAAGATTGCCAACATTCAAGAT
       ::  : :::::::::::::: :::::::::::::::::::::::: : ::::::::::::
b3809  GCGGATCTTGACAATCCATATATCTTAATTACTGATAAGAAGATTTCAAACATTCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b7867  ATCTTGCCACTGTTACAATCCATCGTTGAACAAGGCGGCCACTTGTTGATCATTGCTGAT
       ::::: ::::: ::::::::::::::::::::::::   :  ::::::::::::::::::
b3809  ATCTTACCACTATTACAATCCATCGTTGAACAAGGCAAGCCATTGTTGATCATTGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b7867  GACATTACTGGTGAAGCATTGCCAACCTTAGTCTTGAACAAGATGCGTGGTACCTTTAAC
       :::::: :::::::::: :: ::::::::::::::::::::::::::::: :: ::::::
b3809  GACATTTCTGGTGAAGCTTTACCAACCTTAGTCTTGAACAAGATGCGTGGGACGTTTAAC
              490       500       510       520       530       540

              550  
b7867  GTTGTGGCGGTA
       ::::: :: :: 
b3809  GTTGTCGCCGTT
              550  

</pre>
<hr>
<A name=b27946>
<pre>
>><a onClick="window.open('getRecord.php?id=b27946',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27946" target=_"blank">b27946</a> AVFI01000013 Lactiplantibacillus plantarum  216  (552 nt)
 initn: 2239 init1: 2239 opt: 2251  Z-score: 93.6  bits: 27.1 E():   39
banded Smith-Waterman score: 2251; 89.8% identity (89.8% similar) in 551 nt overlap (1-551:1-551)
<p>

               10        20        30        40        50        60
b7867  GCAACGGTCTTAACCCAAGCAATCGTTAATGAAGGTATGAAGAACGTTACTGCCGGTGCT
       :::::::::::::: ::: ::::::::::::::::::::::::::::::: :::::::::
b27946 GCAACGGTCTTAACACAATCAATCGTTAATGAAGGTATGAAGAACGTTACGGCCGGTGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b7867  AACCCTGTTGGCATTCGTCGTGGTATTGAAAAGGCTACTGAGACGGCGGTTGACTCATTG
       ::::::::::::::::::::::: :::::: : :::::: ::::::::::::::::::: 
b27946 AACCCTGTTGGCATTCGTCGTGGGATTGAAGAAGCTACTAAGACGGCGGTTGACTCATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b7867  CACACTATGGCACACGAAGTAAAGACTCAGGATGACATTGCGCAAATCGCTTCTGTTTCT
       ::: :::::::::::::::: ::::: :: :: :: :::::::::::::::::::: :::
b27946 CACGCTATGGCACACGAAGTTAAGACGCAAGAAGATATTGCGCAAATCGCTTCTGTATCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b7867  TCTGCTAGTGCAGAAGCTGGTAAGTTGATTGCCGACGCCATGGAAAAGGTTGGTAACGAC
       :: :: :::: :::: ::::::: ::::::::::: ::::::::::: :::::: : :::
b27946 TCAGCAAGTGAAGAAACTGGTAAATTGATTGCCGAAGCCATGGAAAAAGTTGGTCATGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b7867  GGAGTTATCACTATTGAAGAATCTCGTGGAGTTGACACTACCCTAGACGTTGTTGAAGGG
       :: :::::::: ::::::::::: ::::: ::::: :::: : :::::::::::::::::
b27946 GGTGTTATCACGATTGAAGAATCACGTGGTGTTGATACTAGCTTAGACGTTGTTGAAGGG
              250       260       270       280       290       300

              310       320       330       340       350       360
b7867  ATGCAATTCGACCGCGGCTACATGTCACAATACATGGTTACTGACAACGACAAGATGGAA
       ::::::::::::::::::::: : :::::::::::::::::::: :: :: :::::::::
b27946 ATGCAATTCGACCGCGGCTACTTATCACAATACATGGTTACTGATAATGATAAGATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b7867  GCTAACCTTGACAATCCATACATCTTAATTACTGATAAGAAGATTGCCAACATTCAAGAT
       ::  : :::::::::::::: :::::::::::::::::::::::: : ::::::::::::
b27946 GCGGATCTTGACAATCCATATATCTTAATTACTGATAAGAAGATTTCAAACATTCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b7867  ATCTTGCCACTGTTACAATCCATCGTTGAACAAGGCGGCCACTTGTTGATCATTGCTGAT
       ::::: ::::: ::::::::::::::::::::::::   :  ::::::::::::::::::
b27946 ATCTTACCACTATTACAATCCATCGTTGAACAAGGCAAGCCATTGTTGATCATTGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b7867  GACATTACTGGTGAAGCATTGCCAACCTTAGTCTTGAACAAGATGCGTGGTACCTTTAAC
       :::::: :::::::::: :: ::::::::::::::::::::::::::::: :: ::::::
b27946 GACATTTCTGGTGAAGCTTTACCAACCTTAGTCTTGAACAAGATGCGTGGGACGTTTAAC
              490       500       510       520       530       540

              550  
b7867  GTTGTGGCGGTA
       ::::: :: :: 
b27946 GTTGTCGCCGTT
              550  

</pre>
<hr>
<A name=b27673>
<pre>
>><a onClick="window.open('getRecord.php?id=b27673',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27673" target=_"blank">b27673</a> NC_021514 Lactiplantibacillus plantarum  16      (552 nt)
 initn: 2230 init1: 2230 opt: 2242  Z-score: 93.4  bits: 27.1 E():   41
banded Smith-Waterman score: 2242; 89.7% identity (89.7% similar) in 551 nt overlap (1-551:1-551)
<p>

               10        20        30        40        50        60
b7867  GCAACGGTCTTAACCCAAGCAATCGTTAATGAAGGTATGAAGAACGTTACTGCCGGTGCT
       :::::::::::::: ::: ::::::::::::::::::::::::::::::: :::::::::
b27673 GCAACGGTCTTAACACAATCAATCGTTAATGAAGGTATGAAGAACGTTACGGCCGGTGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b7867  AACCCTGTTGGCATTCGTCGTGGTATTGAAAAGGCTACTGAGACGGCGGTTGACTCATTG
       ::::::::::::::::::::::: :::::: : :::::: ::::::::::::::::::: 
b27673 AACCCTGTTGGCATTCGTCGTGGGATTGAAGAAGCTACTAAGACGGCGGTTGACTCATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b7867  CACACTATGGCACACGAAGTAAAGACTCAGGATGACATTGCGCAAATCGCTTCTGTTTCT
       ::: :::::::::::::::: ::::: :: :: :: :::::::::::::::::::: :::
b27673 CACGCTATGGCACACGAAGTTAAGACGCAAGAAGATATTGCGCAAATCGCTTCTGTATCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b7867  TCTGCTAGTGCAGAAGCTGGTAAGTTGATTGCCGACGCCATGGAAAAGGTTGGTAACGAC
       :: :: :::: :::: ::::::: ::::::::::: ::::::::::: :::::: : :::
b27673 TCAGCAAGTGAAGAAACTGGTAAATTGATTGCCGAAGCCATGGAAAAAGTTGGTCATGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b7867  GGAGTTATCACTATTGAAGAATCTCGTGGAGTTGACACTACCCTAGACGTTGTTGAAGGG
       :: :::::::: ::::::::::: ::::: ::::: :::: : :::::::::::::::::
b27673 GGTGTTATCACGATTGAAGAATCACGTGGTGTTGATACTAGCTTAGACGTTGTTGAAGGG
              250       260       270       280       290       300

              310       320       330       340       350       360
b7867  ATGCAATTCGACCGCGGCTACATGTCACAATACATGGTTACTGACAACGACAAGATGGAA
       ::::::::::::::::::::: : :::::::::::::::::::: :: :: :::::::: 
b27673 ATGCAATTCGACCGCGGCTACTTATCACAATACATGGTTACTGATAATGATAAGATGGAG
              310       320       330       340       350       360

              370       380       390       400       410       420
b7867  GCTAACCTTGACAATCCATACATCTTAATTACTGATAAGAAGATTGCCAACATTCAAGAT
       ::  : :::::::::::::: :::::::::::::::::::::::: : ::::::::::::
b27673 GCGGATCTTGACAATCCATATATCTTAATTACTGATAAGAAGATTTCAAACATTCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b7867  ATCTTGCCACTGTTACAATCCATCGTTGAACAAGGCGGCCACTTGTTGATCATTGCTGAT
       ::::: ::::: ::::::::::::::::::::::::   :  ::::::::::::::::::
b27673 ATCTTACCACTATTACAATCCATCGTTGAACAAGGCAAGCCATTGTTGATCATTGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b7867  GACATTACTGGTGAAGCATTGCCAACCTTAGTCTTGAACAAGATGCGTGGTACCTTTAAC
       :::::: :::::::::: :: ::::::::::::::::::::::::::::: :: ::::::
b27673 GACATTTCTGGTGAAGCTTTACCAACCTTAGTCTTGAACAAGATGCGTGGGACGTTTAAC
              490       500       510       520       530       540

              550  
b7867  GTTGTGGCGGTA
       ::::: :: :: 
b27673 GTTGTCGCCGTT
              550  

</pre>
<hr>
<A name=b7824>
<pre>
>><a onClick="window.open('getRecord.php?id=b7824',
                                'cpndb_record'); return false;" href="getRecord.php?id=b7824" target=_"blank">b7824</a> AF429653 Lactiplantibacillus plantarum ATCC 1443  (552 nt)
 initn: 2230 init1: 2230 opt: 2242  Z-score: 93.4  bits: 27.1 E():   41
banded Smith-Waterman score: 2242; 89.7% identity (89.7% similar) in 551 nt overlap (1-551:1-551)
<p>

               10        20        30        40        50        60
b7867  GCAACGGTCTTAACCCAAGCAATCGTTAATGAAGGTATGAAGAACGTTACTGCCGGTGCT
       ::::::: :::: : ::: ::::::::::::::::::::::::::::::: :::::::::
b7824  GCAACGGCCTTAGCACAATCAATCGTTAATGAAGGTATGAAGAACGTTACGGCCGGTGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b7867  AACCCTGTTGGCATTCGTCGTGGTATTGAAAAGGCTACTGAGACGGCGGTTGACTCATTG
       ::::::::::::::::::::::: :::::: : :::::: ::::::::::::::::::: 
b7824  AACCCTGTTGGCATTCGTCGTGGGATTGAAGAAGCTACTAAGACGGCGGTTGACTCATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b7867  CACACTATGGCACACGAAGTAAAGACTCAGGATGACATTGCGCAAATCGCTTCTGTTTCT
       ::: :::::::::::::::: ::::: :: :: :: :::::::::::::::::::: :::
b7824  CACGCTATGGCACACGAAGTTAAGACGCAAGAAGATATTGCGCAAATCGCTTCTGTATCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b7867  TCTGCTAGTGCAGAAGCTGGTAAGTTGATTGCCGACGCCATGGAAAAGGTTGGTAACGAC
       :: :: :: : :::: ::::::: ::::::::::: :::::::::::::::::: : :::
b7824  TCAGCAAGCGAAGAAACTGGTAAATTGATTGCCGAAGCCATGGAAAAGGTTGGTCATGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b7867  GGAGTTATCACTATTGAAGAATCTCGTGGAGTTGACACTACCCTAGACGTTGTTGAAGGG
       :: :::::::: ::::::::::: ::::: ::::: :::: : :::::::::::::::::
b7824  GGTGTTATCACGATTGAAGAATCACGTGGTGTTGATACTAGCTTAGACGTTGTTGAAGGG
              250       260       270       280       290       300

              310       320       330       340       350       360
b7867  ATGCAATTCGACCGCGGCTACATGTCACAATACATGGTTACTGACAACGACAAGATGGAA
       ::::::::::::::::::::: : ::::::::::::::::::::::: :: :::::::::
b7824  ATGCAATTCGACCGCGGCTACTTATCACAATACATGGTTACTGACAATGATAAGATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b7867  GCTAACCTTGACAATCCATACATCTTAATTACTGATAAGAAGATTGCCAACATTCAAGAT
       ::  : :::::::::::::: :::::::::::::::::::::::: : ::::::::::::
b7824  GCGGATCTTGACAATCCATATATCTTAATTACTGATAAGAAGATTTCAAACATTCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b7867  ATCTTGCCACTGTTACAATCCATCGTTGAACAAGGCGGCCACTTGTTGATCATTGCTGAT
       ::::: ::::: ::::::::::::::::::::::::   :  ::::::::::::::::::
b7824  ATCTTACCACTATTACAATCCATCGTTGAACAAGGCAAGCCATTGTTGATCATTGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b7867  GACATTACTGGTGAAGCATTGCCAACCTTAGTCTTGAACAAGATGCGTGGTACCTTTAAC
       :::::: :::::::::: :: ::::::::::::::::::::::::::::: :: ::::::
b7824  GACATTTCTGGTGAAGCTTTACCAACCTTAGTCTTGAACAAGATGCGTGGGACGTTTAAC
              490       500       510       520       530       540

              550  
b7867  GTTGTGGCGGTA
       ::::: :: :: 
b7824  GTTGTCGCCGTT
              550  

</pre>
<hr>
<A name=b13776>
<pre>
>><a onClick="window.open('getRecord.php?id=b13776',
                                'cpndb_record'); return false;" href="getRecord.php?id=b13776" target=_"blank">b13776</a> NZ_ACGZ01000067 Lactiplantibacillus plantarum s  (552 nt)
 initn: 2230 init1: 2230 opt: 2242  Z-score: 93.4  bits: 27.1 E():   41
banded Smith-Waterman score: 2242; 89.7% identity (89.7% similar) in 551 nt overlap (1-551:1-551)
<p>

               10        20        30        40        50        60
b7867  GCAACGGTCTTAACCCAAGCAATCGTTAATGAAGGTATGAAGAACGTTACTGCCGGTGCT
       :::::::::::::: ::: ::::::::::::::::::::::::::::::: :::::::::
b13776 GCAACGGTCTTAACACAATCAATCGTTAATGAAGGTATGAAGAACGTTACGGCCGGTGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b7867  AACCCTGTTGGCATTCGTCGTGGTATTGAAAAGGCTACTGAGACGGCGGTTGACTCATTG
       ::::::::::::::::::::::: :::::: : :::::: ::::::::::::::::::: 
b13776 AACCCTGTTGGCATTCGTCGTGGGATTGAAGAAGCTACTAAGACGGCGGTTGACTCATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b7867  CACACTATGGCACACGAAGTAAAGACTCAGGATGACATTGCGCAAATCGCTTCTGTTTCT
       ::: :::::::::::::::: ::::: :: :: :: :::::::::::::::::::: :::
b13776 CACGCTATGGCACACGAAGTTAAGACGCAAGAAGATATTGCGCAAATCGCTTCTGTATCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b7867  TCTGCTAGTGCAGAAGCTGGTAAGTTGATTGCCGACGCCATGGAAAAGGTTGGTAACGAC
       :: :: :::: :::: ::::::: ::::::::::: ::::::::::: :::::: : :::
b13776 TCAGCAAGTGAAGAAACTGGTAAATTGATTGCCGAAGCCATGGAAAAAGTTGGTCATGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b7867  GGAGTTATCACTATTGAAGAATCTCGTGGAGTTGACACTACCCTAGACGTTGTTGAAGGG
       :: :::::::: ::::::::::: ::::: ::::: ::::   :::::::::::::::::
b13776 GGTGTTATCACGATTGAAGAATCACGTGGTGTTGATACTAGTTTAGACGTTGTTGAAGGG
              250       260       270       280       290       300

              310       320       330       340       350       360
b7867  ATGCAATTCGACCGCGGCTACATGTCACAATACATGGTTACTGACAACGACAAGATGGAA
       ::::::::::::::::::::: : :::::::::::::::::::: :: :: :::::::::
b13776 ATGCAATTCGACCGCGGCTACTTATCACAATACATGGTTACTGATAATGATAAGATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b7867  GCTAACCTTGACAATCCATACATCTTAATTACTGATAAGAAGATTGCCAACATTCAAGAT
       ::  : :::::::::::::: :::::::::::::::::::::::: : ::::::::::::
b13776 GCGGATCTTGACAATCCATATATCTTAATTACTGATAAGAAGATTTCAAACATTCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b7867  ATCTTGCCACTGTTACAATCCATCGTTGAACAAGGCGGCCACTTGTTGATCATTGCTGAT
       ::::: ::::: ::::::::::::::::::::::::   :  ::::::::::::::::::
b13776 ATCTTACCACTATTACAATCCATCGTTGAACAAGGCAAGCCATTGTTGATCATTGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b7867  GACATTACTGGTGAAGCATTGCCAACCTTAGTCTTGAACAAGATGCGTGGTACCTTTAAC
       :::::: :::::::::: :: ::::::::::::::::::::::::::::: :: ::::::
b13776 GACATTTCTGGTGAAGCTTTACCAACCTTAGTCTTGAACAAGATGCGTGGGACGTTTAAC
              490       500       510       520       530       540

              550  
b7867  GTTGTGGCGGTA
       ::::: :: :: 
b13776 GTTGTCGCCGTT
              550  

</pre>
<hr>
<A name=b26426>
<pre>
>><a onClick="window.open('getRecord.php?id=b26426',
                                'cpndb_record'); return false;" href="getRecord.php?id=b26426" target=_"blank">b26426</a> CP005942 Lactiplantibacillus plantarum subsp. p  (552 nt)
 initn: 2230 init1: 2230 opt: 2242  Z-score: 93.4  bits: 27.1 E():   41
banded Smith-Waterman score: 2242; 89.7% identity (89.7% similar) in 551 nt overlap (1-551:1-551)
<p>

               10        20        30        40        50        60
b7867  GCAACGGTCTTAACCCAAGCAATCGTTAATGAAGGTATGAAGAACGTTACTGCCGGTGCT
       :::::::::::::: ::: ::::::::::::::::::::::::::::::: :::::::::
b26426 GCAACGGTCTTAACACAATCAATCGTTAATGAAGGTATGAAGAACGTTACGGCCGGTGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b7867  AACCCTGTTGGCATTCGTCGTGGTATTGAAAAGGCTACTGAGACGGCGGTTGACTCATTG
       ::::::::::::::::::::::: :::::: : :::::: ::::::::::::::::::: 
b26426 AACCCTGTTGGCATTCGTCGTGGGATTGAAGAAGCTACTAAGACGGCGGTTGACTCATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b7867  CACACTATGGCACACGAAGTAAAGACTCAGGATGACATTGCGCAAATCGCTTCTGTTTCT
       ::: :::::::::::::::: ::::: :: :: :: :::::::::::::::::::: :::
b26426 CACGCTATGGCACACGAAGTTAAGACGCAAGAAGATATTGCGCAAATCGCTTCTGTATCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b7867  TCTGCTAGTGCAGAAGCTGGTAAGTTGATTGCCGACGCCATGGAAAAGGTTGGTAACGAC
       :: :: :::: :::: ::::::: ::::::::::: ::::::::::: :::::: : :::
b26426 TCAGCAAGTGAAGAAACTGGTAAATTGATTGCCGAAGCCATGGAAAAAGTTGGTCATGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b7867  GGAGTTATCACTATTGAAGAATCTCGTGGAGTTGACACTACCCTAGACGTTGTTGAAGGG
       :: :::::::: ::::::::::: ::::: ::::: :::: : :::::::::::::::::
b26426 GGTGTTATCACGATTGAAGAATCACGTGGTGTTGATACTAGCTTAGACGTTGTTGAAGGG
              250       260       270       280       290       300

              310       320       330       340       350       360
b7867  ATGCAATTCGACCGCGGCTACATGTCACAATACATGGTTACTGACAACGACAAGATGGAA
       ::::::::::::::::::::: : :::::::::::::::::::: :: :: :::::::: 
b26426 ATGCAATTCGACCGCGGCTACTTATCACAATACATGGTTACTGATAATGATAAGATGGAG
              310       320       330       340       350       360

              370       380       390       400       410       420
b7867  GCTAACCTTGACAATCCATACATCTTAATTACTGATAAGAAGATTGCCAACATTCAAGAT
       ::  : :::::::::::::: :::::::::::::::::::::::: : ::::::::::::
b26426 GCGGATCTTGACAATCCATATATCTTAATTACTGATAAGAAGATTTCAAACATTCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b7867  ATCTTGCCACTGTTACAATCCATCGTTGAACAAGGCGGCCACTTGTTGATCATTGCTGAT
       ::::: ::::: ::::::::::::::::::::::::   :  ::::::::::::::::::
b26426 ATCTTACCACTATTACAATCCATCGTTGAACAAGGCAAGCCATTGTTGATCATTGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b7867  GACATTACTGGTGAAGCATTGCCAACCTTAGTCTTGAACAAGATGCGTGGTACCTTTAAC
       :::::: :::::::::: :: ::::::::::::::::::::::::::::: :: ::::::
b26426 GACATTTCTGGTGAAGCTTTACCAACCTTAGTCTTGAACAAGATGCGTGGGACGTTTAAC
              490       500       510       520       530       540

              550  
b7867  GTTGTGGCGGTA
       ::::: :: :: 
b26426 GTTGTCGCCGTT
              550  

</pre>
<hr>
<A name=b7851>
<pre>
>><a onClick="window.open('getRecord.php?id=b7851',
                                'cpndb_record'); return false;" href="getRecord.php?id=b7851" target=_"blank">b7851</a> AF429688 Lentilactobacillus kefiri ATCC 35411     (552 nt)
 initn: 2164 init1: 2164 opt: 2224  Z-score: 92.8  bits: 27.0 E():   44
banded Smith-Waterman score: 2224; 89.3% identity (89.3% similar) in 551 nt overlap (1-551:1-551)
<p>

               10        20        30        40        50        60
b7867  GCAACGGTCTTAACCCAAGCAATCGTTAATGAAGGTATGAAGAACGTTACTGCCGGTGCT
       :::::::::::::: :::::::: :::::::: :::::::::::::::::::: ::::: 
b7851  GCAACGGTCTTAACTCAAGCAATTGTTAATGATGGTATGAAGAACGTTACTGCTGGTGCC
               10        20        30        40        50        60

               70        80        90       100       110       120
b7867  AACCCTGTTGGCATTCGTCGTGGTATTGAAAAGGCTACTGAGACGGCGGTTGACTCATTG
       ::::: ::::: :::::::: ::::::::::::::::: ::::: :: ::::::::::::
b7851  AACCCAGTTGGTATTCGTCGCGGTATTGAAAAGGCTACCGAGACTGCTGTTGACTCATTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b7867  CACACTATGGCACACGAAGTAAAGACTCAGGATGACATTGCGCAAATCGCTTCTGTTTCT
       ::::::::::::::::: :: ::::: :::::::: :: :: ::::: ::::::::::: 
b7851  CACACTATGGCACACGATGTTAAGACCCAGGATGATATGGCACAAATTGCTTCTGTTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b7867  TCTGCTAGTGCAGAAGCTGGTAAGTTGATTGCCGACGCCATGGAAAAGGTTGGTAACGAC
       :: :::::::::::: :::::::::: ::::: :: :: :::::::::::::: :: :: 
b7851  TCAGCTAGTGCAGAAACTGGTAAGTTAATTGCTGATGCAATGGAAAAGGTTGGCAATGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b7867  GGAGTTATCACTATTGAAGAATCTCGTGGAGTTGACACTACCCTAGACGTTGTTGAAGGG
       :::::::: ::::: :::::::: ::::: ::::::::::::::::: ::::::::::::
b7851  GGAGTTATTACTATCGAAGAATCACGTGGTGTTGACACTACCCTAGATGTTGTTGAAGGG
              250       260       270       280       290       300

              310       320       330       340       350       360
b7867  ATGCAATTCGACCGCGGCTACATGTCACAATACATGGTTACTGACAACGACAAGATGGAA
       :::::::: ::::: :: ::::::::::::::::::::::: :: :::::::::::::::
b7851  ATGCAATTTGACCGTGGTTACATGTCACAATACATGGTTACCGATAACGACAAGATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b7867  GCTAACCTTGACAATCCATACATCTTAATTACTGATAAGAAGATTGCCAACATTCAAGAT
       :: ::::::::::::::::::::::: :::::::: ::::::::: : ::::::::::::
b7851  GCCAACCTTGACAATCCATACATCTTGATTACTGACAAGAAGATTTCGAACATTCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b7867  ATCTTGCCACTGTTACAATCCATCGTTGAACAAGGCGGCCACTTGTTGATCATTGCTGAT
       ::::::::: :::: :::::::: :::::::::::::: ::: :::::: ::::::::::
b7851  ATCTTGCCATTGTTCCAATCCATTGTTGAACAAGGCGGTCACCTGTTGACCATTGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b7867  GACATTACTGGTGAAGCATTGCCAACCTTAGTCTTGAACAAGATGCGTGGTACCTTTAAC
       :: ::::::::::::::::: ::::::::::: :: :: ::::::::::: ::::: :: 
b7851  GATATTACTGGTGAAGCATTACCAACCTTAGTTTTAAATAAGATGCGTGGGACCTTCAAT
              490       500       510       520       530       540

              550  
b7867  GTTGTGGCGGTA
       ::::: :: :: 
b7851  GTTGTTGCTGTT
              550  

</pre>
<hr>
<A name=b3331>
<pre>
>><a onClick="window.open('getRecord.php?id=b3331',
                                'cpndb_record'); return false;" href="getRecord.php?id=b3331" target=_"blank">b3331</a> AF405403 Pediococcus acidilactici ATCC 8042       (552 nt)
 initn: 2101 init1: 2101 opt: 2174  Z-score: 91.4  bits: 26.7 E():   53
banded Smith-Waterman score: 2174; 88.6% identity (88.6% similar) in 553 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b7867  GCAACGGTCTTAACCCAAGCAATCGTTAATGAAGGTATGAAGAACGTTACTGCCGGTGCT
       :: :: ::  : ::::::::::: ::::: :::::::::::::: :::::::: ::::::
b3331  GCGACAGTACTTACCCAAGCAATTGTTAACGAAGGTATGAAGAATGTTACTGCTGGTGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b7867  AACCCTGTTGGCATTCGTCGTGGTATTGAAAAGGCTACTGAGACGGCGGTTGACTCATTG
       ::::: ::::: ::::::::::::::::::::::::::::: :  :: :::: : :::::
b3331  AACCCAGTTGGTATTCGTCGTGGTATTGAAAAGGCTACTGAAAAAGCAGTTGCCGCATTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b7867  CACACTATGGCACACGAAGTAAAGACTCAGGATGACATTGCGCAAATCGCTTCTGTTTCT
       ::::  ::: ::::::::::::::::: :::::::::: :: :::::::::::  :::::
b3331  CACAACATGTCACACGAAGTAAAGACTAAGGATGACATCGCACAAATCGCTTCAATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b7867  TCTGCTAGTGCAGAAGCTGGTAAGTTGATTGCCGACGCCATGGAAAAGGTTGGTAACGAC
       :::::::   :::::: ::::::::::::::: ::::: :::::::::::::::::::::
b3331  TCTGCTAACCCAGAAGTTGGTAAGTTGATTGCGGACGCAATGGAAAAGGTTGGTAACGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b7867  GGAGTTATCACTATTGAAGAATCTCGTGGAGTTGACACTACCCTAGACGTTGTTGAAGGG
       :::::::::::::::::::::::::::::::::::::: ::::: :::::::::::::: 
b3331  GGAGTTATCACTATTGAAGAATCTCGTGGAGTTGACACAACCCTCGACGTTGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b7867  ATGCAATTCGACCGCGGCTACATGTCACAATACATGGTTACTGACAACGACAAGATGGAA
       ::::::::::: :: :: ::::::::::::::::::::::::::::::::::::::::::
b3331  ATGCAATTCGATCGTGGTTACATGTCACAATACATGGTTACTGACAACGACAAGATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b7867  GCTAACCTTGACAATCCATACATCTTAATTACTGATAAGAAGATTGCCAACATTCAAGAT
       :::::::: ::::: :::::::::::::::::::  ::::::::::::::::: ::::::
b3331  GCTAACCTCGACAACCCATACATCTTAATTACTGGCAAGAAGATTGCCAACATCCAAGAT
              370       380       390       400       410       420

              430       440       450        460       470         
b7867  ATCTTGCCACTGTTACAATCCATCGTTGAAC-AAGGCGGCCACTTGTTGATCATTGCTGA
       :: :::::: :: : :::::  : ::::::: ::: : : ::::: ::::::::::::::
b3331  ATTTTGCCATTGCTTCAATCAGTGGTTGAACAAAGCCCGTCACTT-TTGATCATTGCTGA
              430       440       450       460        470         

     480       490       500       510       520       530         
b7867  TGACATTACTGGTGAAGCATTGCCAACCTTAGTCTTGAACAAGATGCGTGGTACCTTTAA
       :::::: ::::::::::::::::::::::: :: :::::::::::::::::::: :: ::
b3331  TGACATCACTGGTGAAGCATTGCCAACCTTGGTATTGAACAAGATGCGTGGTACTTTCAA
     480       490       500       510       520       530         

     540       550  
b7867  CGTTGTGGCGGTA
       :::  : :: :::
b3331  CGTAATTGCTGTA
     540       550  

</pre>
<hr>
<A name=b7830>
<pre>
>><a onClick="window.open('getRecord.php?id=b7830',
                                'cpndb_record'); return false;" href="getRecord.php?id=b7830" target=_"blank">b7830</a> AF429661 Lactiplantibacillus plantarum ATCC 8014  (552 nt)
 initn: 2158 init1: 2158 opt: 2170  Z-score: 91.3  bits: 26.7 E():   53
banded Smith-Waterman score: 2170; 88.2% identity (88.2% similar) in 551 nt overlap (1-551:1-551)
<p>

               10        20        30        40        50        60
b7867  GCAACGGTCTTAACCCAAGCAATCGTTAATGAAGGTATGAAGAACGTTACTGCCGGTGCT
       ::::::: : :  :    :: : ::::::::: ::::::::::::::::: :::::::::
b7830  GCAACGGCCCTTGCTTCGGCGACCGTTAATGAGGGTATGAAGAACGTTACAGCCGGTGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b7867  AACCCTGTTGGCATTCGTCGTGGTATTGAAAAGGCTACTGAGACGGCGGTTGACTCATTG
       ::::::::::::::::::::::: :::::: :::::::: :::: :: : ::::::::: 
b7830  AACCCTGTTGGCATTCGTCGTGGGATTGAAGAGGCTACTAAGACCGCTGCTGACTCATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b7867  CACACTATGGCACACGAAGTAAAGACTCAGGATGACATTGCGCAAATCGCTTCTGTTTCT
       ::: ::::::::::::: :: ::::::::::: :: :: :::::::: :::::::: :: 
b7830  CACGCTATGGCACACGAGGTTAAGACTCAGGAAGATATGGCGCAAATAGCTTCTGTGTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b7867  TCTGCTAGTGCAGAAGCTGGTAAGTTGATTGCCGACGCCATGGAAAAGGTTGGTAACGAC
       ::::: :::: ::::  ::::::: ::::::: :: :::::::::::::::::: : :::
b7830  TCTGCAAGTGAAGAACTTGGTAAGCTGATTGCTGATGCCATGGAAAAGGTTGGTCATGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b7867  GGAGTTATCACTATTGAAGAATCTCGTGGAGTTGACACTACCCTAGACGTTGTTGAAGGG
       :: :::::::::::::::::::: ::::: :::::::::: : :::::::::::::::::
b7830  GGTGTTATCACTATTGAAGAATCACGTGGTGTTGACACTAGCTTAGACGTTGTTGAAGGG
              250       260       270       280       290       300

              310       320       330       340       350       360
b7867  ATGCAATTCGACCGCGGCTACATGTCACAATACATGGTTACTGACAACGACAAGATGGAA
       :::::::: :::::::::::: : :::::::::::::::::::::::::: :::::::::
b7830  ATGCAATTTGACCGCGGCTACTTATCACAATACATGGTTACTGACAACGATAAGATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b7867  GCTAACCTTGACAATCCATACATCTTAATTACTGATAAGAAGATTGCCAACATTCAAGAT
       ::  :::::::::::::::: :::::::::::::::::::::::: : ::::::::::::
b7830  GCGGACCTTGACAATCCATATATCTTAATTACTGATAAGAAGATTACAAACATTCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b7867  ATCTTGCCACTGTTACAATCCATCGTTGAACAAGGCGGCCACTTGTTGATCATTGCTGAT
       ::::: ::::: ::::::::::::::::::::::::   :  ::::::::::::::::::
b7830  ATCTTACCACTATTACAATCCATCGTTGAACAAGGCAAGCCATTGTTGATCATTGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b7867  GACATTACTGGTGAAGCATTGCCAACCTTAGTCTTGAACAAGATGCGTGGTACCTTTAAC
       ::::::::::::::::: :: ::::::::::::::::::::::: ::::: :: ::::::
b7830  GACATTACTGGTGAAGCTTTACCAACCTTAGTCTTGAACAAGATCCGTGGGACGTTTAAC
              490       500       510       520       530       540

              550  
b7867  GTTGTGGCGGTA
       ::::: :: :: 
b7830  GTTGTCGCCGTT
              550  

</pre>
<hr>
<A name=b3343>
<pre>
>><a onClick="window.open('getRecord.php?id=b3343',
                                'cpndb_record'); return false;" href="getRecord.php?id=b3343" target=_"blank">b3343</a> AF405415 Pediococcus acidilactici ATCC 25740      (552 nt)
 initn: 2092 init1: 2092 opt: 2169  Z-score: 91.2  bits: 26.7 E():   54
banded Smith-Waterman score: 2169; 88.6% identity (88.6% similar) in 552 nt overlap (1-551:1-551)
<p>

               10        20        30        40        50        60
b7867  GCAACGGTCTTAACCCAAGCAATCGTTAATGAAGGTATGAAGAACGTTACTGCCGGTGCT
       :: :::::  : ::::::::::: ::::: ::::::::::::::::::::::: ::::::
b3343  GCCACGGTACTCACCCAAGCAATTGTTAACGAAGGTATGAAGAACGTTACTGCTGGTGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b7867  AACCCTGTTGGCATTCGTCGTGGTATTGAAAAGGCTACTGAGACGGCGGTTGACTCATTG
       ::::: ::::: ::::::::::::::::::::::::::::: :  :: :::: : :::::
b3343  AACCCAGTTGGTATTCGTCGTGGTATTGAAAAGGCTACTGAAAAAGCAGTTGCCGCATTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b7867  CACACTATGGCACACGAAGTAAAGACTCAGGATGACATTGCGCAAATCGCTTCTGTTTCT
       ::::  ::: ::::::::::::::::  :::::::::: :: :::::::::::  :::::
b3343  CACAACATGTCACACGAAGTAAAGACAAAGGATGACATCGCACAAATCGCTTCAATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b7867  TCTGCTAGTGCAGAAGCTGGTAAGTTGATTGCCGACGCCATGGAAAAGGTTGGTAACGAC
       :::::::   :::::: ::::::::::::::: ::::: :::::::: ::::::::::::
b3343  TCTGCTAACCCAGAAGTTGGTAAGTTGATTGCGGACGCAATGGAAAAAGTTGGTAACGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b7867  GGAGTTATCACTATTGAAGAATCTCGTGGAGTTGACACTACCCTAGACGTTGTTGAAGGG
       :::::::::::::::::::::::::::::::::::::: ::::: :::::::::::::: 
b3343  GGAGTTATCACTATTGAAGAATCTCGTGGAGTTGACACAACCCTCGACGTTGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b7867  ATGCAATTCGACCGCGGCTACATGTCACAATACATGGTTACTGACAACGACAAGATGGAA
       ::::::::::: :: :: ::::::::::::::::::::::::::::::::::::::::::
b3343  ATGCAATTCGATCGTGGTTACATGTCACAATACATGGTTACTGACAACGACAAGATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b7867  GCTAACCTTGACAATCCATACATCTTAATTACTGATAAGAAGATTGCCAACATTCAAGAT
       :::::::::::::: :::::::::::::::::::: ::::::::::: ::::: ::::: 
b3343  GCTAACCTTGACAACCCATACATCTTAATTACTGACAAGAAGATTGCTAACATCCAAGAC
              370       380       390       400       410       420

              430       440       450        460       470         
b7867  ATCTTGCCACTGTTACAATCCATCGTTGAAC-AAGGCGGCCACTTGTTGATCATTGCTGA
       ::::::::: :  : :::::  : ::::::: ::: ::  ::::: ::::::::::::::
b3343  ATCTTGCCATTACTTCAATCAGTGGTTGAACAAAGCCGTTCACTT-TTGATCATTGCTGA
              430       440       450       460        470         

     480       490       500       510       520       530         
b7867  TGACATTACTGGTGAAGCATTGCCAACCTTAGTCTTGAACAAGATGCGTGGTACCTTTAA
       :::::: ::::: ::::::::::::::::: :: :::::::::::::::::::: :: ::
b3343  TGACATCACTGGCGAAGCATTGCCAACCTTGGTATTGAACAAGATGCGTGGTACTTTCAA
     480       490       500       510       520       530         

     540       550  
b7867  CGTTGTGGCGGTA
       ::: :: :: :: 
b3343  CGTGGTTGCTGTT
     540       550  

</pre>
<hr>
<A name=b20083>
<pre>
>><a onClick="window.open('getRecord.php?id=b20083',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20083" target=_"blank">b20083</a> AGKB01000005 Pediococcus acidilactici MA18/5M    (552 nt)
 initn: 2101 init1: 2101 opt: 2169  Z-score: 91.2  bits: 26.7 E():   54
banded Smith-Waterman score: 2169; 88.6% identity (88.6% similar) in 552 nt overlap (1-551:1-551)
<p>

               10        20        30        40        50        60
b7867  GCAACGGTCTTAACCCAAGCAATCGTTAATGAAGGTATGAAGAACGTTACTGCCGGTGCT
       :: :: ::  : ::::::::::: ::::: ::::::::::::::::::::::: ::::::
b20083 GCGACAGTACTTACCCAAGCAATTGTTAACGAAGGTATGAAGAACGTTACTGCTGGTGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b7867  AACCCTGTTGGCATTCGTCGTGGTATTGAAAAGGCTACTGAGACGGCGGTTGACTCATTG
       ::::: ::::: ::::::::::::::::::::::::::::: :  :: :::: : :::::
b20083 AACCCAGTTGGTATTCGTCGTGGTATTGAAAAGGCTACTGAAAAAGCAGTTGCCGCATTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b7867  CACACTATGGCACACGAAGTAAAGACTCAGGATGACATTGCGCAAATCGCTTCTGTTTCT
       ::::  ::: ::::::::::::::::  :::::::::: :: :::::::::::  :::::
b20083 CACAACATGTCACACGAAGTAAAGACAAAGGATGACATCGCACAAATCGCTTCAATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b7867  TCTGCTAGTGCAGAAGCTGGTAAGTTGATTGCCGACGCCATGGAAAAGGTTGGTAACGAC
       :::::::   :::::: ::::::::::::::: ::::: :::::::: ::::::::::::
b20083 TCTGCTAACCCAGAAGTTGGTAAGTTGATTGCGGACGCAATGGAAAAAGTTGGTAACGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b7867  GGAGTTATCACTATTGAAGAATCTCGTGGAGTTGACACTACCCTAGACGTTGTTGAAGGG
       :::::::::::::::::::::::::::::::::::::: ::::: :::::::::::::: 
b20083 GGAGTTATCACTATTGAAGAATCTCGTGGAGTTGACACAACCCTCGACGTTGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b7867  ATGCAATTCGACCGCGGCTACATGTCACAATACATGGTTACTGACAACGACAAGATGGAA
       ::::::::::: :: :: ::::::::::::::::::::::::::::::::::::::::::
b20083 ATGCAATTCGATCGTGGTTACATGTCACAATACATGGTTACTGACAACGACAAGATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b7867  GCTAACCTTGACAATCCATACATCTTAATTACTGATAAGAAGATTGCCAACATTCAAGAT
       :::::::::::::: :::::::::::::::::::: ::::::::::: ::::: ::::: 
b20083 GCTAACCTTGACAACCCATACATCTTAATTACTGACAAGAAGATTGCTAACATCCAAGAC
              370       380       390       400       410       420

              430       440       450        460       470         
b7867  ATCTTGCCACTGTTACAATCCATCGTTGAAC-AAGGCGGCCACTTGTTGATCATTGCTGA
       ::::::::: :  : :::::  : ::::::: ::: ::  ::::: ::::::::::::::
b20083 ATCTTGCCATTACTTCAATCAGTGGTTGAACAAAGCCGTTCACTT-TTGATCATTGCTGA
              430       440       450       460        470         

     480       490       500       510       520       530         
b7867  TGACATTACTGGTGAAGCATTGCCAACCTTAGTCTTGAACAAGATGCGTGGTACCTTTAA
       :::::: ::::::::::::::::::::::: :: :::::::::::::::::::: :: ::
b20083 TGACATCACTGGTGAAGCATTGCCAACCTTGGTATTGAACAAGATGCGTGGTACTTTCAA
     480       490       500       510       520       530         

     540       550  
b7867  CGTTGTGGCGGTA
       ::: :: :: :: 
b20083 CGTGGTTGCTGTT
     540       550  

</pre>
<hr>
<A name=b21876>
<pre>
>><a onClick="window.open('getRecord.php?id=b21876',
                                'cpndb_record'); return false;" href="getRecord.php?id=b21876" target=_"blank">b21876</a> BANK01000034 Pediococcus lolii NGRI 0510Q DSM 1  (552 nt)
 initn: 2101 init1: 2101 opt: 2169  Z-score: 91.2  bits: 26.7 E():   54
banded Smith-Waterman score: 2169; 88.6% identity (88.6% similar) in 552 nt overlap (1-551:1-551)
<p>

               10        20        30        40        50        60
b7867  GCAACGGTCTTAACCCAAGCAATCGTTAATGAAGGTATGAAGAACGTTACTGCCGGTGCT
       :: :: ::  : ::::::::::: ::::: ::::::::::::::::::::::: ::::::
b21876 GCGACAGTACTTACCCAAGCAATTGTTAACGAAGGTATGAAGAACGTTACTGCTGGTGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b7867  AACCCTGTTGGCATTCGTCGTGGTATTGAAAAGGCTACTGAGACGGCGGTTGACTCATTG
       ::::: ::::: ::::::::::::::::::::::::::::: :  :: :::: : :::::
b21876 AACCCAGTTGGGATTCGTCGTGGTATTGAAAAGGCTACTGAAAAAGCAGTTGCCGCATTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b7867  CACACTATGGCACACGAAGTAAAGACTCAGGATGACATTGCGCAAATCGCTTCTGTTTCT
       ::::  ::: ::::::::::::::::  :::::::::: :: :::::::::::  :::::
b21876 CACAACATGTCACACGAAGTAAAGACAAAGGATGACATCGCACAAATCGCTTCAATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b7867  TCTGCTAGTGCAGAAGCTGGTAAGTTGATTGCCGACGCCATGGAAAAGGTTGGTAACGAC
       :::::::   :::::: ::::::::::::::: :: :: :::::::::::::::::::::
b21876 TCTGCTAACCCAGAAGTTGGTAAGTTGATTGCGGATGCAATGGAAAAGGTTGGTAACGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b7867  GGAGTTATCACTATTGAAGAATCTCGTGGAGTTGACACTACCCTAGACGTTGTTGAAGGG
       :::::::::::::::::::::::::::::::::::::: ::::: :::::::::::::: 
b21876 GGAGTTATCACTATTGAAGAATCTCGTGGAGTTGACACAACCCTCGACGTTGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b7867  ATGCAATTCGACCGCGGCTACATGTCACAATACATGGTTACTGACAACGACAAGATGGAA
       ::::::::::: :: :: ::::::::::::::::::::::::::::::::::::::::::
b21876 ATGCAATTCGATCGTGGTTACATGTCACAATACATGGTTACTGACAACGACAAGATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b7867  GCTAACCTTGACAATCCATACATCTTAATTACTGATAAGAAGATTGCCAACATTCAAGAT
       :::::::: ::::: :::::::::::::::::::: ::::::::::: ::::::::::: 
b21876 GCTAACCTCGACAACCCATACATCTTAATTACTGACAAGAAGATTGCTAACATTCAAGAC
              370       380       390       400       410       420

              430       440       450        460       470         
b7867  ATCTTGCCACTGTTACAATCCATCGTTGAAC-AAGGCGGCCACTTGTTGATCATTGCTGA
       ::::::::: :  : :::::  : ::::::: ::: ::  ::::: ::::::::::::::
b21876 ATCTTGCCATTACTTCAATCAGTGGTTGAACAAAGCCGTTCACTT-TTGATCATTGCTGA
              430       440       450       460        470         

     480       490       500       510       520       530         
b7867  TGACATTACTGGTGAAGCATTGCCAACCTTAGTCTTGAACAAGATGCGTGGTACCTTTAA
       :::::: ::::::::::::::::::::::: :: :::::::::::::::::::: :: ::
b21876 TGACATCACTGGTGAAGCATTGCCAACCTTGGTATTGAACAAGATGCGTGGTACTTTCAA
     480       490       500       510       520       530         

     540       550  
b7867  CGTTGTGGCGGTA
       ::: :: :: :: 
b21876 CGTGGTTGCTGTT
     540       550  

</pre>
<hr>
<A name=b15806>
<pre>
>><a onClick="window.open('getRecord.php?id=b15806',
                                'cpndb_record'); return false;" href="getRecord.php?id=b15806" target=_"blank">b15806</a> GG730085 Pediococcus acidilactici 7_4            (552 nt)
 initn: 2092 init1: 2092 opt: 2160  Z-score: 91.0  bits: 26.6 E():   55
banded Smith-Waterman score: 2160; 88.4% identity (88.4% similar) in 552 nt overlap (1-551:1-551)
<p>

               10        20        30        40        50        60
b7867  GCAACGGTCTTAACCCAAGCAATCGTTAATGAAGGTATGAAGAACGTTACTGCCGGTGCT
       :: :: ::  : ::::::::::: ::::: ::::::::::::::::::::::: ::::::
b15806 GCGACAGTACTCACCCAAGCAATTGTTAACGAAGGTATGAAGAACGTTACTGCTGGTGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b7867  AACCCTGTTGGCATTCGTCGTGGTATTGAAAAGGCTACTGAGACGGCGGTTGACTCATTG
       ::::: ::::: ::::::::::::::::::::::::::::: :  :: :::: : :::::
b15806 AACCCAGTTGGTATTCGTCGTGGTATTGAAAAGGCTACTGAAAAAGCAGTTGCCGCATTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b7867  CACACTATGGCACACGAAGTAAAGACTCAGGATGACATTGCGCAAATCGCTTCTGTTTCT
       ::::  ::: ::::::::::::::::  :::::::::: :: :::::::::::  :::::
b15806 CACAACATGTCACACGAAGTAAAGACAAAGGATGACATCGCACAAATCGCTTCAATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b7867  TCTGCTAGTGCAGAAGCTGGTAAGTTGATTGCCGACGCCATGGAAAAGGTTGGTAACGAC
       :::::::   :::::: ::::::::::::::: ::::: :::::::: ::::::::::::
b15806 TCTGCTAACCCAGAAGTTGGTAAGTTGATTGCGGACGCAATGGAAAAAGTTGGTAACGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b7867  GGAGTTATCACTATTGAAGAATCTCGTGGAGTTGACACTACCCTAGACGTTGTTGAAGGG
       :::::::::::::::::::::::::::::::::::::: ::::: :::::::::::::: 
b15806 GGAGTTATCACTATTGAAGAATCTCGTGGAGTTGACACAACCCTCGACGTTGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b7867  ATGCAATTCGACCGCGGCTACATGTCACAATACATGGTTACTGACAACGACAAGATGGAA
       ::::::::::: :: :: ::::::::::::::::::::::::::::::::::::::::::
b15806 ATGCAATTCGATCGTGGTTACATGTCACAATACATGGTTACTGACAACGACAAGATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b7867  GCTAACCTTGACAATCCATACATCTTAATTACTGATAAGAAGATTGCCAACATTCAAGAT
       :::::::::::::: :::::::::::::::::::: ::::::::::: ::::: ::::: 
b15806 GCTAACCTTGACAACCCATACATCTTAATTACTGACAAGAAGATTGCTAACATCCAAGAC
              370       380       390       400       410       420

              430       440       450        460       470         
b7867  ATCTTGCCACTGTTACAATCCATCGTTGAAC-AAGGCGGCCACTTGTTGATCATTGCTGA
       ::::::::: :  : :::::  : ::::::: ::: ::  ::::: ::::::::::::::
b15806 ATCTTGCCATTACTTCAATCAGTGGTTGAACAAAGCCGTTCACTT-TTGATCATTGCTGA
              430       440       450       460        470         

     480       490       500       510       520       530         
b7867  TGACATTACTGGTGAAGCATTGCCAACCTTAGTCTTGAACAAGATGCGTGGTACCTTTAA
       :::::: :: :::::::::::::::::::: :: :::::::::::::::::::: :: ::
b15806 TGACATCACGGGTGAAGCATTGCCAACCTTGGTATTGAACAAGATGCGTGGTACTTTCAA
     480       490       500       510       520       530         

     540       550  
b7867  CGTTGTGGCGGTA
       ::: :: :: :: 
b15806 CGTGGTTGCTGTT
     540       550  

</pre>
<hr>
<A name=b26264>
<pre>
>><a onClick="window.open('getRecord.php?id=b26264',
                                'cpndb_record'); return false;" href="getRecord.php?id=b26264" target=_"blank">b26264</a> AQGT01000002 Pediococcus acidilactici D3 2408    (552 nt)
 initn: 2092 init1: 2092 opt: 2160  Z-score: 91.0  bits: 26.6 E():   55
banded Smith-Waterman score: 2160; 88.4% identity (88.4% similar) in 552 nt overlap (1-551:1-551)
<p>

               10        20        30        40        50        60
b7867  GCAACGGTCTTAACCCAAGCAATCGTTAATGAAGGTATGAAGAACGTTACTGCCGGTGCT
       :: :: ::  : ::::::::::: ::::: ::::::::::::::::::::::: ::::::
b26264 GCGACAGTACTTACCCAAGCAATTGTTAACGAAGGTATGAAGAACGTTACTGCTGGTGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b7867  AACCCTGTTGGCATTCGTCGTGGTATTGAAAAGGCTACTGAGACGGCGGTTGACTCATTG
       ::::: ::::: ::::::::::::::::::::::::::::: :  :: :::: : :::::
b26264 AACCCAGTTGGGATTCGTCGTGGTATTGAAAAGGCTACTGAAAAAGCAGTTGCCGCATTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b7867  CACACTATGGCACACGAAGTAAAGACTCAGGATGACATTGCGCAAATCGCTTCTGTTTCT
       ::::  ::: ::::::::::::::::  :::::::::: :: :::::::::::  :::::
b26264 CACAACATGTCACACGAAGTAAAGACAAAGGATGACATCGCACAAATCGCTTCAATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b7867  TCTGCTAGTGCAGAAGCTGGTAAGTTGATTGCCGACGCCATGGAAAAGGTTGGTAACGAC
       :::::::   :::::: ::::::::::::::: :: :: :::::::::::::::::::::
b26264 TCTGCTAACCCAGAAGTTGGTAAGTTGATTGCGGATGCAATGGAAAAGGTTGGTAACGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b7867  GGAGTTATCACTATTGAAGAATCTCGTGGAGTTGACACTACCCTAGACGTTGTTGAAGGG
       :::::::::::::::::::::::::::::::::::::: ::::: :::::::::::::: 
b26264 GGAGTTATCACTATTGAAGAATCTCGTGGAGTTGACACAACCCTCGACGTTGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b7867  ATGCAATTCGACCGCGGCTACATGTCACAATACATGGTTACTGACAACGACAAGATGGAA
       ::::::::::: :: :: ::::::::::::::::::::::::::::::::::::::::::
b26264 ATGCAATTCGATCGTGGTTACATGTCACAATACATGGTTACTGACAACGACAAGATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b7867  GCTAACCTTGACAATCCATACATCTTAATTACTGATAAGAAGATTGCCAACATTCAAGAT
       :::::::: ::::: :::::::::::::::::::: ::::::::::: ::::: ::::: 
b26264 GCTAACCTCGACAACCCATACATCTTAATTACTGACAAGAAGATTGCTAACATCCAAGAC
              370       380       390       400       410       420

              430       440       450        460       470         
b7867  ATCTTGCCACTGTTACAATCCATCGTTGAAC-AAGGCGGCCACTTGTTGATCATTGCTGA
       ::::::::: :  : :::::  : ::::::: ::: ::  ::::: ::::::::::::::
b26264 ATCTTGCCATTACTTCAATCAGTGGTTGAACAAAGCCGTTCACTT-TTGATCATTGCTGA
              430       440       450       460        470         

     480       490       500       510       520       530         
b7867  TGACATTACTGGTGAAGCATTGCCAACCTTAGTCTTGAACAAGATGCGTGGTACCTTTAA
       :::::: ::::::::::::::::::::::: :: :::::::::::::::::::: :: ::
b26264 TGACATCACTGGTGAAGCATTGCCAACCTTGGTATTGAACAAGATGCGTGGTACTTTCAA
     480       490       500       510       520       530         

     540       550  
b7867  CGTTGTGGCGGTA
       ::: :: :: :: 
b26264 CGTGGTTGCTGTT
     540       550  

</pre>
<hr>
<A name=b17809>
<pre>
>><a onClick="window.open('getRecord.php?id=b17809',
                                'cpndb_record'); return false;" href="getRecord.php?id=b17809" target=_"blank">b17809</a> NZ_AEEG01000009 Pediococcus acidilactici DSM 20  (552 nt)
 initn: 2092 init1: 2092 opt: 2160  Z-score: 91.0  bits: 26.6 E():   55
banded Smith-Waterman score: 2160; 88.4% identity (88.4% similar) in 552 nt overlap (1-551:1-551)
<p>

               10        20        30        40        50        60
b7867  GCAACGGTCTTAACCCAAGCAATCGTTAATGAAGGTATGAAGAACGTTACTGCCGGTGCT
       :: :: ::  : ::::::::::: ::::: ::::::::::::::::::::::: ::::::
b17809 GCGACAGTACTTACCCAAGCAATTGTTAACGAAGGTATGAAGAACGTTACTGCTGGTGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b7867  AACCCTGTTGGCATTCGTCGTGGTATTGAAAAGGCTACTGAGACGGCGGTTGACTCATTG
       ::::: ::::: ::::::::::::::::::::::::::::: :  :: :::: : :::::
b17809 AACCCAGTTGGTATTCGTCGTGGTATTGAAAAGGCTACTGAAAAAGCAGTTGCCGCATTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b7867  CACACTATGGCACACGAAGTAAAGACTCAGGATGACATTGCGCAAATCGCTTCTGTTTCT
       ::::  ::: ::::::::::::::::  :::::::::: :: :::::::::::  :::::
b17809 CACAACATGTCACACGAAGTAAAGACAAAGGATGACATCGCACAAATCGCTTCAATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b7867  TCTGCTAGTGCAGAAGCTGGTAAGTTGATTGCCGACGCCATGGAAAAGGTTGGTAACGAC
       :::::::   :::::: ::::::::::::::: ::::: :::::::: ::::::::::::
b17809 TCTGCTAACCCAGAAGTTGGTAAGTTGATTGCGGACGCAATGGAAAAAGTTGGTAACGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b7867  GGAGTTATCACTATTGAAGAATCTCGTGGAGTTGACACTACCCTAGACGTTGTTGAAGGG
       :::::::::::::::::::::::::::::::::::::: ::::: :::::::::::::: 
b17809 GGAGTTATCACTATTGAAGAATCTCGTGGAGTTGACACAACCCTCGACGTTGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b7867  ATGCAATTCGACCGCGGCTACATGTCACAATACATGGTTACTGACAACGACAAGATGGAA
       ::::::::::: :: :: ::::::::::::::::::::::::::::::::::::::::::
b17809 ATGCAATTCGATCGTGGTTACATGTCACAATACATGGTTACTGACAACGACAAGATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b7867  GCTAACCTTGACAATCCATACATCTTAATTACTGATAAGAAGATTGCCAACATTCAAGAT
       :::::::::::::: :::::::::::::::::::: ::::::::::: ::::: ::::: 
b17809 GCTAACCTTGACAACCCATACATCTTAATTACTGACAAGAAGATTGCTAACATCCAAGAC
              370       380       390       400       410       420

              430       440       450        460       470         
b7867  ATCTTGCCACTGTTACAATCCATCGTTGAAC-AAGGCGGCCACTTGTTGATCATTGCTGA
       ::::::::: :  : :::::  : ::::::: ::: ::  ::::: ::::::::::::::
b17809 ATCTTGCCATTACTTCAATCAGTGGTTGAACAAAGCCGTTCACTT-TTGATCATTGCTGA
              430       440       450       460        470         

     480       490       500       510       520       530         
b7867  TGACATTACTGGTGAAGCATTGCCAACCTTAGTCTTGAACAAGATGCGTGGTACCTTTAA
       :::::: :: :::::::::::::::::::: :: :::::::::::::::::::: :: ::
b17809 TGACATCACAGGTGAAGCATTGCCAACCTTGGTATTGAACAAGATGCGTGGTACTTTCAA
     480       490       500       510       520       530         

     540       550  
b7867  CGTTGTGGCGGTA
       ::: :: :: :: 
b17809 CGTGGTTGCTGTT
     540       550  

</pre>
<hr>
<A name=b3341>
<pre>
>><a onClick="window.open('getRecord.php?id=b3341',
                                'cpndb_record'); return false;" href="getRecord.php?id=b3341" target=_"blank">b3341</a> AF405413 Pediococcus acidilactici ATCC 12697      (552 nt)
 initn: 2083 init1: 2083 opt: 2156  Z-score: 90.9  bits: 26.6 E():   56
banded Smith-Waterman score: 2156; 88.2% identity (88.2% similar) in 553 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b7867  GCAACGGTCTTAACCCAAGCAATCGTTAATGAAGGTATGAAGAACGTTACTGCCGGTGCT
       :: :: ::  : ::::::::::: ::::: ::::::::::::::::::::::: ::::::
b3341  GCGACAGTACTCACCCAAGCAATTGTTAACGAAGGTATGAAGAACGTTACTGCTGGTGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b7867  AACCCTGTTGGCATTCGTCGTGGTATTGAAAAGGCTACTGAGACGGCGGTTGACTCATTG
       ::::: ::::: :::::::: :::::::::::::::::::: :  :: :::: : :::::
b3341  AACCCAGTTGGTATTCGTCGCGGTATTGAAAAGGCTACTGAAAAAGCAGTTGCCGCATTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b7867  CACACTATGGCACACGAAGTAAAGACTCAGGATGACATTGCGCAAATCGCTTCTGTTTCT
       ::::  ::: ::::::::::::::::  :::::::::: :: :::::::::::  :::::
b3341  CACAACATGTCACACGAAGTAAAGACAAAGGATGACATCGCACAAATCGCTTCAATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b7867  TCTGCTAGTGCAGAAGCTGGTAAGTTGATTGCCGACGCCATGGAAAAGGTTGGTAACGAC
       :::::::   :::::: ::::::::::::::: :::::  ::::::: ::::::::::::
b3341  TCTGCTAACCCAGAAGTTGGTAAGTTGATTGCGGACGCAGTGGAAAAAGTTGGTAACGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b7867  GGAGTTATCACTATTGAAGAATCTCGTGGAGTTGACACTACCCTAGACGTTGTTGAAGGG
       :::::::::::::::::::::::::::::::::::::: ::::: :::::::::::::: 
b3341  GGAGTTATCACTATTGAAGAATCTCGTGGAGTTGACACAACCCTCGACGTTGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b7867  ATGCAATTCGACCGCGGCTACATGTCACAATACATGGTTACTGACAACGACAAGATGGAA
       ::::::::::: :: :: ::::::::::::::::::::::::::::::::::::::::::
b3341  ATGCAATTCGATCGTGGTTACATGTCACAATACATGGTTACTGACAACGACAAGATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b7867  GCTAACCTTGACAATCCATACATCTTAATTACTGATAAGAAGATTGCCAACATTCAAGAT
       :::::::::::::: :::::::::::::::::::: ::::::::::: ::::: ::::: 
b3341  GCTAACCTTGACAACCCATACATCTTAATTACTGACAAGAAGATTGCTAACATCCAAGAC
              370       380       390       400       410       420

              430       440       450        460       470         
b7867  ATCTTGCCACTGTTACAATCCATCGTTGAAC-AAGGCGGCCACTTGTTGATCATTGCTGA
       ::::::::: :  : :::::  : ::::::: ::: ::  ::::: ::::::::::::::
b3341  ATCTTGCCATTACTTCAATCAGTGGTTGAACAAAGCCGTTCACTT-TTGATCATTGCTGA
              430       440       450       460        470         

     480       490       500       510       520       530         
b7867  TGACATTACTGGTGAAGCATTGCCAACCTTAGTCTTGAACAAGATGCGTGGTACCTTTAA
       :::::: ::::::::::::::::::::::: :: :::::::::::::::::::: :: ::
b3341  TGACATCACTGGTGAAGCATTGCCAACCTTGGTATTGAACAAGATGCGTGGTACTTTCAA
     480       490       500       510       520       530         

     540       550  
b7867  CGTTGTGGCGGTA
       ::: :: :: :::
b3341  CGTGGTTGCTGTA
     540       550  

</pre>
<hr>
<p><pre>


552 residues in 1 query   sequences
10433008 residues in 18820 library sequences
 Scomplib [35.03]
 start: Mon Jul 22 07:24:07 2024 done: Mon Jul 22 07:24:10 2024
 Total Scan time:  2.250 Total Display time:  0.010

Function used was FASTA [version 35.03 Feb. 18, 2008]
</pre>