/var/www/html/cpndb/fasta_results/b3114.fasta# /data/www/cpndb/fasta35 -E 200 -Q -m 6 -b 20 -d 20 -z 2 -H /data/www/cpndb/fasta_results/b3114 /data/www/cpndb/blastDBs/reference_a_nut
<pre>
FASTA searches a protein or DNA sequence data bank
 version 35.03 Feb. 18, 2008
Please cite:
 W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

</pre>
Query: /data/www/cpndb/fasta_results/b3114
<pre>
  1>>>b3114 552 nt - 552 nt
Library: /data/www/cpndb/blastDBs/reference_a_nut 10433008 residues in 18820 sequences

10433008 residues in 18820 sequences
Statistics: MLE_cen statistics: Lambda= 0.0059;  K=0.0001596 (cen=941)
Algorithm: FASTA (3.5 Sept 2006) [optimized]
Parameters: +5/-4 matrix (5:-4) ktup: 6
 join: 51, opt: 36, open/ext: -12/-4, width:  16
 Scan time:  2.350
</pre>
<p>
<hr>
<p>
<p><pre>

The best scores are:                                      opt bits E(18820)
<a onClick="window.open('getRecord.php?id=b35283',
                                'cpndb_record'); return false;" href="getRecord.php?id=b35283" target=_"blank">b35283</a> NZ_HF545616 Ruminococcus bicirculans 80 ( 552) [f] 1774 27.8      25 <A HREF="#b35283">align</A>
<a onClick="window.open('getRecord.php?id=b6857',
                                'cpndb_record'); return false;" href="getRecord.php?id=b6857" target=_"blank">b6857</a> AY691296 Ruminococcus flavefaciens ATCC  ( 552) [f] 1617 26.5      63 <A HREF="#b6857">align</A>
<a onClick="window.open('getRecord.php?id=b4508',
                                'cpndb_record'); return false;" href="getRecord.php?id=b4508" target=_"blank">b4508</a> AY189823 Ruminococcus flavefaciens FD-1  ( 558) [f] 1569 26.0      83 <A HREF="#b4508">align</A>
<a onClick="window.open('getRecord.php?id=b6854',
                                'cpndb_record'); return false;" href="getRecord.php?id=b6854" target=_"blank">b6854</a> AY691293 Ruminococcus albus ATCC 27210   ( 552) [f] 1549 25.9      94 <A HREF="#b6854">align</A>
<a onClick="window.open('getRecord.php?id=b26847',
                                'cpndb_record'); return false;" href="getRecord.php?id=b26847" target=_"blank">b26847</a> NZ_AFNE01000456 Ruminococcus flavefacie ( 552) [f] 1549 25.9      94 <A HREF="#b26847">align</A>
<a onClick="window.open('getRecord.php?id=b7995',
                                'cpndb_record'); return false;" href="getRecord.php?id=b7995" target=_"blank">b7995</a> DQ297938 Ruminococcus flavefaciens C94   ( 552) [f] 1549 25.9      94 <A HREF="#b7995">align</A>
<a onClick="window.open('getRecord.php?id=b34892',
                                'cpndb_record'); return false;" href="getRecord.php?id=b34892" target=_"blank">b34892</a> NZ_NIOI01000002  Pseudoclostridium  the ( 552) [f] 1518 25.6 1.1e+02 <A HREF="#b34892">align</A>
<a onClick="window.open('getRecord.php?id=b28755',
                                'cpndb_record'); return false;" href="getRecord.php?id=b28755" target=_"blank">b28755</a> NZ_FTRU01000008 Negativibacillus massil ( 552) [f] 1512 25.6 1.2e+02 <A HREF="#b28755">align</A>
<a onClick="window.open('getRecord.php?id=b29028',
                                'cpndb_record'); return false;" href="getRecord.php?id=b29028" target=_"blank">b29028</a> NZ_FTRU01000008 Negativibacillus massil ( 552) [f] 1512 25.6 1.2e+02 <A HREF="#b29028">align</A>
<a onClick="window.open('getRecord.php?id=b26859',
                                'cpndb_record'); return false;" href="getRecord.php?id=b26859" target=_"blank">b26859</a> NZ_KB907525 Eubacterium siraeum DSM 157 ( 552) [f] 1510 25.5 1.2e+02 <A HREF="#b26859">align</A>
<a onClick="window.open('getRecord.php?id=b10859',
                                'cpndb_record'); return false;" href="getRecord.php?id=b10859" target=_"blank">b10859</a> NZ_ABCA03000029 Eubacterium siraeum DSM ( 552) [f] 1510 25.5 1.2e+02 <A HREF="#b10859">align</A>
<a onClick="window.open('getRecord.php?id=b34890',
                                'cpndb_record'); return false;" href="getRecord.php?id=b34890" target=_"blank">b34890</a> NZ_NIOK01000025 Pseudoclostridium therm ( 552) [f] 1509 25.5 1.2e+02 <A HREF="#b34890">align</A>
<a onClick="window.open('getRecord.php?id=b6855',
                                'cpndb_record'); return false;" href="getRecord.php?id=b6855" target=_"blank">b6855</a> AY691294 Ruminococcus bromii ATCC 27255  ( 552) [f] 1504 25.5 1.2e+02 <A HREF="#b6855">align</A>
<a onClick="window.open('getRecord.php?id=b26802',
                                'cpndb_record'); return false;" href="getRecord.php?id=b26802" target=_"blank">b26802</a> NZ_KB911066 [Clostridium] sporosphaeroi ( 552) [f] 1504 25.5 1.2e+02 <A HREF="#b26802">align</A>
<a onClick="window.open('getRecord.php?id=b16655',
                                'cpndb_record'); return false;" href="getRecord.php?id=b16655" target=_"blank">b16655</a> FP929044 Eubacterium siraeum 70/3       ( 552) [f] 1501 25.5 1.2e+02 <A HREF="#b16655">align</A>
<a onClick="window.open('getRecord.php?id=b457',
                                'cpndb_record'); return false;" href="getRecord.php?id=b457" target=_"blank">b457</a> Z68137 Clostridium thermocellum NCIMB 106 ( 552) [f] 1500 25.5 1.3e+02 <A HREF="#b457">align</A>
<a onClick="window.open('getRecord.php?id=b29765',
                                'cpndb_record'); return false;" href="getRecord.php?id=b29765" target=_"blank">b29765</a> NZ_NHOC01000007 Butyricicoccus  sp. BB1 ( 552) [f] 1500 25.5 1.3e+02 <A HREF="#b29765">align</A>
<a onClick="window.open('getRecord.php?id=b31343',
                                'cpndb_record'); return false;" href="getRecord.php?id=b31343" target=_"blank">b31343</a> NZ_ACVX01000031 Ruminiclostridium therm ( 552) [f] 1500 25.5 1.3e+02 <A HREF="#b31343">align</A>
<a onClick="window.open('getRecord.php?id=b20483',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20483" target=_"blank">b20483</a> AJGS01000109 Clostridium thermocellum A ( 552) [f] 1500 25.5 1.3e+02 <A HREF="#b20483">align</A>
<a onClick="window.open('getRecord.php?id=b28063',
                                'cpndb_record'); return false;" href="getRecord.php?id=b28063" target=_"blank">b28063</a> NZ_CBQO010000120 Clostridium  thermocel ( 552) [f] 1500 25.5 1.3e+02 <A HREF="#b28063">align</A>
</pre><p><hr><p>

>>>b3114, 552 nt vs /data/www/cpndb/blastDBs/reference_a_nut library

<A name=b35283>
<pre>
>><a onClick="window.open('getRecord.php?id=b35283',
                                'cpndb_record'); return false;" href="getRecord.php?id=b35283" target=_"blank">b35283</a> NZ_HF545616 Ruminococcus bicirculans 80/3        (552 nt)
 initn: 1735 init1: 1735 opt: 1774  Z-score: 97.3  bits: 27.8 E():   25
banded Smith-Waterman score: 1774; 80.2% identity (80.2% similar) in 551 nt overlap (1-551:1-551)
<p>

               10        20        30        40        50        60
b3114  GCTACTCTTCTTGCACAGGCTCTTATCAGAGAAGGTATGAAGAACATCGCAGCAGGTGCT
       :::::  : ::::: ::::::::: : ::::: ::::::::::: :::::::::::::::
b35283 GCTACATTGCTTGCTCAGGCTCTTGTTAGAGAGGGTATGAAGAATATCGCAGCAGGTGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b3114  AACCCGATGATCGTCCGCAAGGGTATGGCAAAGGCTGTTGACACAGCTGTTGAAGCTATC
       :: :: ::: :  :    :: :::::::   ::::::: :: :: ::::::::: :::::
b35283 AATCCAATGGTACTTAAGAAAGGTATGGATCAGGCTGTAGATACTGCTGTTGAAACTATC
               70        80        90       100       110       120

              130       140       150       160       170       180
b3114  AAGGCTAACTCCGTTCAGGTTTCGGGCTCCGATGACATTGCAAGCGTTGCTGCAAACTCT
          ::::::::     :: :    ::::: :: :: :: :: :: :: : :::    :::
b35283 GTCGCTAACTCAAAGAAGATAGAAGGCTCTGAGGAGATAGCTAGAGTAGGTGCTGTTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b3114  GCTGCTGATGAAAATGTCGGCAAGCTCATTGCAGAAGCTATGGAAAAGGTTACCGCTGAC
       :: :::::::: ::  :::: ::::: :: :: :: :::::::::::::: :: ::::::
b35283 GCCGCTGATGAGAACATCGGTAAGCTTATCGCTGAGGCTATGGAAAAGGTAACTGCTGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b3114  GGTGTTATCACCATTGAAGAATCCAAGACTGCCGAAACATACTCCGAAGTTGTTGAAGGT
       :: ::::::::  :::: :: :: :::::::: ::::: :::  :::::::::::: :::
b35283 GGCGTTATCACTCTTGAGGAGTCAAAGACTGCTGAAACTTACAGCGAAGTTGTTGAGGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b3114  ATGCAGTTCGACAGAGGCTACATCACACCTTACATGGTTACTGATACCGATAAGATGGAA
       ::::::::::::::::: :: ::: ::::::::::::: :: ::::: ::::: ::::::
b35283 ATGCAGTTCGACAGAGGATATATCGCACCTTACATGGTAACAGATACAGATAAAATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b3114  GCCGTTATTGATGATGCTTACATTCTTATCACAGACAAGAAGATCTCCTCTATCCAGGAA
       :: ::  ::::::: ::::::::::::::::::::::::::::::::    :: ::::::
b35283 GCTGTCCTTGATGACGCTTACATTCTTATCACAGACAAGAAGATCTCTAACATTCAGGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b3114  CTTCTTCCGCTCCTCGAACAGATCGTAAAGTCAGGCAAGAAGCTTGTTATCATTGCAGAA
        ::::::: :: ::::: :::::::::::: : :::::::::::  :::::::::: :: 
b35283 ATTCTTCCACTTCTCGAGCAGATCGTAAAGGCTGGCAAGAAGCTCCTTATCATTGCCGAG
              430       440       450       460       470       480

              490       500       510       520       530       540
b3114  GACATTGAGGGCGAAGCACTTTCCACACTTATCGTAAACAAGCTCAGAGGAACATTCACC
       ::: :::::::::: :: ::::: :: ::::: ::::::::::: ::::: :: ::::: 
b35283 GACGTTGAGGGCGAGGCTCTTTCAACTCTTATTGTAAACAAGCTGAGAGGTACTTTCACT
              490       500       510       520       530       540

              550  
b3114  TGTGTAGCTGTT
       :: :::::::: 
b35283 TGCGTAGCTGTA
              550  

</pre>
<hr>
<A name=b6857>
<pre>
>><a onClick="window.open('getRecord.php?id=b6857',
                                'cpndb_record'); return false;" href="getRecord.php?id=b6857" target=_"blank">b6857</a> AY691296 Ruminococcus flavefaciens ATCC 19208     (552 nt)
 initn: 1575 init1: 1575 opt: 1617  Z-score: 90.0  bits: 26.5 E():   63
banded Smith-Waterman score: 1617; 77.0% identity (77.0% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b3114  GCTACTCTTCTTGCACAGGCTCTTATCAGAGAAGGTATGAAGAACATCGCAGCAGGTGCT
       ::::: ::::: :::::: :: :: :  : :: ::::::::::: :::::::::::::: 
b6857  GCTACACTTCTCGCACAGACTATTGTTCGTGAGGGTATGAAGAATATCGCAGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b3114  AACCCGATGATCGTCCGCAAGGGTATGGCAAAGGCTGTTGACACAGCTGTTGAAGCTATC
       ::::: ::: :  ::   :::::::: :: :::::::: :::   :::::  : ::::::
b6857  AACCCAATGGTACTCAAGAAGGGTATCGCTAAGGCTGTAGACGTTGCTGTAAAGGCTATC
               70        80        90       100       110       120

              130       140       150       160       170       180
b3114  AAGGCTAACTCCGTTCAGGTTTCGGGCTCCGATGACATTGCAAGCGTTGCTGCAAACTCT
          :  :: ::       ::   ::::   :: :: :::::::: :: : : ::   :::
b6857  GTTGACAATTCAAAGGCTGTACAGGGCAGTGAGGATATTGCAAGAGTAGGTACAGTTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b3114  GCTGCTGATGAAAATGTCGGCAAGCTCATTGCAGAAGCTATGGAAAAGGTTACCGCTGAC
        ::::::: ::    :: :: ::::::::::: :: :::::::: ::::: :: ::::::
b6857  TCTGCTGACGAGGCAGTAGGTAAGCTCATTGCTGAGGCTATGGAGAAGGTAACTGCTGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b3114  GGTGTTATCACCATTGAAGAATCCAAGACTGCCGAAACATACTCCGAAGTTGTTGAAGGT
       :: ::::::::  :::::::   :::::: :: :: ::::::  ::::::::::::::::
b6857  GGCGTTATCACTCTTGAAGAGAGCAAGACAGCTGAGACATACAGCGAAGTTGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b3114  ATGCAGTTCGACAGAGGCTACATCACACCTTACATGGTTACTGATACCGATAAGATGGAA
       ::::::::::::::::: :::::: :::: :: ::::: :: ::: : :: :::::::::
b6857  ATGCAGTTCGACAGAGGTTACATCTCACCATATATGGTAACAGATGCAGACAAGATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b3114  GCCGTTATTGATGATGCTTACATTCTTATCACAGACAAGAAGATCTCCTCTATCCAGGAA
       :: :::   ::::: :::: : :::::::::::::::::::::: :: ::::::::::: 
b6857  GCTGTTTACGATGACGCTTTCGTTCTTATCACAGACAAGAAGATATCTTCTATCCAGGAG
              370       380       390       400       410       420

              430       440       450       460       470       480
b3114  CTTCTTCCGCTCCTCGAACAGATCGTAAAGTCAGGCAAGAAGCTTGTTATCATTGCAGAA
        : :: :: :: ::::: :::::::::::    ::::::::::: ::::::::::: :: 
b6857  ATACTCCCACTTCTCGAGCAGATCGTAAAAATGGGCAAGAAGCTCGTTATCATTGCTGAG
              430       440       450       460       470       480

              490       500       510       520       530       540
b3114  GACATTGAGGGCGAAGCACTTTCCACACTTATCGTAAACAAGCTCAGAGGAACATTCACC
       ::: ::::::::::::: ::: : ::: ::::: : ::::: ::: : :: :::::::  
b6857  GACGTTGAGGGCGAAGCTCTTACAACAATTATCCTCAACAATCTCCGCGGCACATTCAAG
              490       500       510       520       530       540

              550  
b3114  TGTGTAGCTGTT
         :: :::::::
b6857  GTTGCAGCTGTT
              550  

</pre>
<hr>
<A name=b4508>
<pre>
>><a onClick="window.open('getRecord.php?id=b4508',
                                'cpndb_record'); return false;" href="getRecord.php?id=b4508" target=_"blank">b4508</a> AY189823 Ruminococcus flavefaciens FD-1           (558 nt)
 initn: 1472 init1: 980 opt: 1569  Z-score: 87.7  bits: 26.0 E():   83
banded Smith-Waterman score: 1569; 76.9% identity (76.9% similar) in 558 nt overlap (1-552:1-558)
<p>

               10        20        30        40        50        60
b3114  GCTACTCTTCTTGCACAGGCTCTTATCAGAGAAGGTATGAAGAACATCGCAGCAGGTGCT
       :::::::: :: :: ::: :: :  :  : :::::::::::::: ::::::::::: :::
b4508  GCTACTCTCCTCGCTCAGACTATCGTTCGTGAAGGTATGAAGAATATCGCAGCAGGCGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b3114  AACCCGATGATCGTCCGCAAGGGTATGGCAAAGGCTGTTGACACAGCTGTTGAAGCTATC
       ::::::::: :  ::   :::::::: ::::::::::::::: : :::::  : ::::::
b4508  AACCCGATGGTTCTCAAGAAGGGTATCGCAAAGGCTGTTGACGCTGCTGTAAAGGCTATC
               70        80        90       100       110       120

              130       140       150       160       170       180
b3114  AAGGCTAACTCCGTTCAGGTTTCGGGCTCCGATGACATTGCAAGCGTTGCTGCAAACTCT
          :  :::::       :::  ::::  ::: :: :: ::::: :: : : :    :::
b4508  GTTGACAACTCAAAGGCTGTTCAGGGCAGCGAGGATATCGCAAGAGTAGGTACTGTTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b3114  GCTGCTGATGAAAATGTCGGCAAGCTCATTGCAGAAGCTATGGAAAAGGTTACCGCTGAC
        ::::::: :: :: :: :: :::::::: :: :: :::::::::::::: ::  :::::
b4508  TCTGCTGACGAGAACGTTGGTAAGCTCATCGCTGAGGCTATGGAAAAGGTAACTTCTGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b3114  GGTGTTATCACCATTGAAGAATCCAAGACTGCCGAAACATACTCCGAAGTTGTTGAAGGT
       :: :::::::: :: ::::::  :::::::::::: :: :::  :::::: ::::: :::
b4508  GGAGTTATCACTATCGAAGAAAGCAAGACTGCCGAGACTTACAGCGAAGTAGTTGAGGGT
              250       260       270       280       290       300

              310       320        330        340        350       
b3114  ATGCAGTTCGACAGAGGCTACATCACACC-TTACATGG-TTACTGATACC-GATAAGATG
       :::::::::::::::::::::::: :::: :::::::: :::: ::: :: :: ::::::
b4508  ATGCAGTTCGACAGAGGCTACATCTCACCTTTACATGGCTTACAGATGCCTGACAAGATG
              310       320       330       340       350       360

       360       370       380       390       400       410       
b3114  GAAGCCGTTATTGATGATGCTTACATTCTTATCACAGACAAGAAGATCTCCTCTATCCAG
       ::::: :::   ::::: :::::: ::::::::::::::::::::::::: :::::::::
b4508  GAAGCTGTTTACGATGACGCTTACGTTCTTATCACAGACAAGAAGATCTCATCTATCCAG
              370       380       390       400       410       420

       420       430       440       450       460       470       
b3114  GAACTTCTTCCGCTCCTCGAACAGATCGTAAAGTCAGGCAAGAAGCTTGTTATCATTGCA
       ::   :: :::    :: :: :: :::::::::   ::: ::::: : ::::::::::: 
b4508  GAGGATCCTCCCGCTCTTGAGCAAATCGTAAAGATGGGCCAGAAGGTCGTTATCATTGCT
              430       440       450       460       470       480

       480       490       500        510       520         530    
b3114  GAAGACATTGAGGGCGAAGCACTTTCC-ACACTTATCGTAAACAAGC--TCAGAGGAACA
       :::::: :::::::::: :: ::: :: ::  : ::: : ::::: :   : : :: :::
b4508  GAAGACGTTGAGGGCGAGGCTCTTACCAACTATCATCCTCAACAACCCTCCCGTGGCACA
              490       500       510       520       530       540

          540       550  
b3114  TTCACCTGTGTAGCTGTT
       ::::    ::  ::::::
b4508  TTCAAGGTTGCTGCTGTT
              550        

</pre>
<hr>
<A name=b6854>
<pre>
>><a onClick="window.open('getRecord.php?id=b6854',
                                'cpndb_record'); return false;" href="getRecord.php?id=b6854" target=_"blank">b6854</a> AY691293 Ruminococcus albus ATCC 27210            (552 nt)
 initn: 1468 init1: 1468 opt: 1549  Z-score: 86.9  bits: 25.9 E():   94
banded Smith-Waterman score: 1549; 75.7% identity (75.7% similar) in 551 nt overlap (1-551:1-551)
<p>

               10        20        30        40        50        60
b3114  GCTACTCTTCTTGCACAGGCTCTTATCAGAGAAGGTATGAAGAACATCGCAGCAGGTGCT
       :::::::: :: :::::::: ::  :  : :: :: :::::::: ::::: :::::::::
b6854  GCTACTCTGCTGGCACAGGCACTGGTACGTGAGGGCATGAAGAATATCGCCGCAGGTGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b3114  AACCCGATGATCGTCCGCAAGGGTATGGCAAAGGCTGTTGACACAGCTGTTGAAGCTATC
       ::::: ::: :  :    ::::::::::: ::::::::::: ::::: ::::: ::::::
b6854  AACCCCATGGTACTGAAGAAGGGTATGGCTAAGGCTGTTGATACAGCAGTTGAGGCTATC
               70        80        90       100       110       120

              130       140       150       160       170       180
b3114  AAGGCTAACTCCGTTCAGGTTTCGGGCTCCGATGACATTGCAAGCGTTGCTGCAAACTCT
       :     ::::::    :: :    :::  : : :: :: ::::: :::: ::::   :: 
b6854  ATAAAGAACTCCAAGAAGATCGAAGGCAGCAAGGATATCGCAAGAGTTGGTGCAGTTTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b3114  GCTGCTGATGAAAATGTCGGCAAGCTCATTGCAGAAGCTATGGAAAAGGTTACCGCTGAC
       ::::::::::: : : ::::  :::: :: :: :: :::::::: ::::: :: ::::::
b6854  GCTGCTGATGATACTATCGGTCAGCTGATCGCTGAGGCTATGGAGAAGGTAACTGCTGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b3114  GGTGTTATCACCATTGAAGAATCCAAGACTGCCGAAACATACTCCGAAGTTGTTGAAGGT
       :: ::::::::  : ::::: :: ::::: :: :: :: :::  ::: :::::::: :::
b6854  GGCGTTATCACTCTGGAAGAGTCAAAGACAGCTGAGACTTACAGCGAGGTTGTTGAGGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b3114  ATGCAGTTCGACAGAGGCTACATCACACCTTACATGGTTACTGATACCGATAAGATGGAA
       ::::::::::::::::: ::: :::  ::::::::::: :: ::::::::::::::::::
b6854  ATGCAGTTCGACAGAGGATACCTCAGCCCTTACATGGTAACAGATACCGATAAGATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b3114  GCCGTTATTGATGATGCTTACATTCTTATCACAGACAAGAAGATCTCCTCTATCCAGGAA
       :: ::  : :: ::::::    : :::::::: :: :::::::::  :  ::: ::::: 
b6854  GCTGTACTGGACGATGCTCTGGTACTTATCACTGATAAGAAGATCGGCAATATGCAGGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b3114  CTTCTTCCGCTCCTCGAACAGATCGTAAAGTCAGGCAAGAAGCTTGTTATCATTGCAGAA
        : :: :: :: :: :: :::::::::::    :::::::::::  : ::::: :: :: 
b6854  ATACTCCCACTGCTGGAGCAGATCGTAAAAATGGGCAAGAAGCTCCTCATCATCGCTGAG
              430       440       450       460       470       480

              490       500       510       520       530       540
b3114  GACATTGAGGGCGAAGCACTTTCCACACTTATCGTAAACAAGCTCAGAGGAACATTCACC
       ::: :::::::::: :: ::   : :::: ::  : :::::::: ::::: :  ::::: 
b6854  GACGTTGAGGGCGAGGCTCTGAGCTCACTGATACTCAACAAGCTGAGAGGCATCTTCACT
              490       500       510       520       530       540

              550  
b3114  TGTGTAGCTGTT
       ::::: ::::: 
b6854  TGTGTTGCTGTA
              550  

</pre>
<hr>
<A name=b26847>
<pre>
>><a onClick="window.open('getRecord.php?id=b26847',
                                'cpndb_record'); return false;" href="getRecord.php?id=b26847" target=_"blank">b26847</a> NZ_AFNE01000456 Ruminococcus flavefaciens 17     (552 nt)
 initn: 1507 init1: 1507 opt: 1549  Z-score: 86.9  bits: 25.9 E():   94
banded Smith-Waterman score: 1549; 75.7% identity (75.7% similar) in 551 nt overlap (1-551:1-551)
<p>

               10        20        30        40        50        60
b3114  GCTACTCTTCTTGCACAGGCTCTTATCAGAGAAGGTATGAAGAACATCGCAGCAGGTGCT
       ::::: ::::: :::::: :  :  :  : :: ::::::::::: ::::::::::: :: 
b26847 GCTACACTTCTCGCACAGACCATCGTTCGTGAGGGTATGAAGAATATCGCAGCAGGCGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b3114  AACCCGATGATCGTCCGCAAGGGTATGGCAAAGGCTGTTGACACAGCTGTTGAAGCTATC
       :: :: ::: :  :    :::::::: :::::::::::::::   :::::  : ::::::
b26847 AATCCCATGGTACTGAAGAAGGGTATCGCAAAGGCTGTTGACGTTGCTGTAAAGGCTATC
               70        80        90       100       110       120

              130       140       150       160       170       180
b3114  AAGGCTAACTCCGTTCAGGTTTCGGGCTCCGATGACATTGCAAGCGTTGCTGCAAACTCT
          :  :::::       ::: : :: :: :: :: :: ::::: :: : : :    :::
b26847 GTTGACAACTCAAAGGCTGTTACAGGTTCAGAGGATATCGCAAGAGTAGGTACTGTTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b3114  GCTGCTGATGAAAATGTCGGCAAGCTCATTGCAGAAGCTATGGAAAAGGTTACCGCTGAC
        :::: :: :: :: :: :: :::::::: :: :: :::::::: ::::: ::  : :::
b26847 TCTGCCGACGAGAACGTAGGTAAGCTCATCGCTGAGGCTATGGAGAAGGTGACTTCCGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b3114  GGTGTTATCACCATTGAAGAATCCAAGACTGCCGAAACATACTCCGAAGTTGTTGAAGGT
       :: :::::::::::::: ::   :::::::::::: :: :::  ::: :: ::::: :::
b26847 GGCGTTATCACCATTGAGGAGAGCAAGACTGCCGAGACCTACAGCGAGGTAGTTGAGGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b3114  ATGCAGTTCGACAGAGGCTACATCACACCTTACATGGTTACTGATACCGATAAGATGGAA
       :::::::::::::::::::::::: :::: :: ::::: :: ::::: ::::::::::::
b26847 ATGCAGTTCGACAGAGGCTACATCTCACCCTATATGGTAACAGATACAGATAAGATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b3114  GCCGTTATTGATGATGCTTACATTCTTATCACAGACAAGAAGATCTCCTCTATCCAGGAA
       :: ::    :: :: :::: : ::::::::::::: ::::::::::: ::::::::::: 
b26847 GCTGTATACGACGACGCTTTCGTTCTTATCACAGATAAGAAGATCTCTTCTATCCAGGAG
              370       380       390       400       410       420

              430       440       450       460       470       480
b3114  CTTCTTCCGCTCCTCGAACAGATCGTAAAGTCAGGCAAGAAGCTTGTTATCATTGCAGAA
        : :: ::::: ::::: ::::::::::::   :::::::::::::: :::::::: :: 
b26847 ATACTCCCGCTTCTCGAGCAGATCGTAAAGATGGGCAAGAAGCTTGTAATCATTGCTGAG
              430       440       450       460       470       480

              490       500       510       520       530       540
b3114  GACATTGAGGGCGAAGCACTTTCCACACTTATCGTAAACAAGCTCAGAGGAACATTCACC
       ::: :::::::::: :: ::: : ::  : ::  : ::::: :: ::::: :: ::::  
b26847 GACGTTGAGGGCGAGGCTCTTACAACTATCATACTCAACAACCTGAGAGGCACCTTCAAG
              490       500       510       520       530       540

              550  
b3114  TGTGTAGCTGTT
          : :::::: 
b26847 GTAGCAGCTGTA
              550  

</pre>
<hr>
<A name=b7995>
<pre>
>><a onClick="window.open('getRecord.php?id=b7995',
                                'cpndb_record'); return false;" href="getRecord.php?id=b7995" target=_"blank">b7995</a> DQ297938 Ruminococcus flavefaciens C94            (552 nt)
 initn: 1435 init1: 1435 opt: 1549  Z-score: 86.9  bits: 25.9 E():   94
banded Smith-Waterman score: 1549; 75.7% identity (75.7% similar) in 551 nt overlap (1-551:1-551)
<p>

               10        20        30        40        50        60
b3114  GCTACTCTTCTTGCACAGGCTCTTATCAGAGAAGGTATGAAGAACATCGCAGCAGGTGCT
       :::::  :::: :::::::::::  :  : :: :: :::::::: ::::: :::::::::
b7995  GCTACAGTTCTAGCACAGGCTCTGGTACGTGAGGGCATGAAGAATATCGCCGCAGGTGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b3114  AACCCGATGATCGTCCGCAAGGGTATGGCAAAGGCTGTTGACACAGCTGTTGAAGCTATC
       ::::: ::: :  :    ::::::::::: ::::::::::: ::::: ::::: ::::::
b7995  AACCCCATGGTACTGAAGAAGGGTATGGCTAAGGCTGTTGATACAGCAGTTGAGGCTATC
               70        80        90       100       110       120

              130       140       150       160       170       180
b3114  AAGGCTAACTCCGTTCAGGTTTCGGGCTCCGATGACATTGCAAGCGTTGCTGCAAACTCT
       :     ::::::    :: :    :::  : : :: :: ::::: :::: ::::   :: 
b7995  ATAAAGAACTCCAAGAAGATCGAAGGCAGCAAGGATATCGCAAGAGTTGGTGCAGTTTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b3114  GCTGCTGATGAAAATGTCGGCAAGCTCATTGCAGAAGCTATGGAAAAGGTTACCGCTGAC
       ::::::::::: : : ::::  :::: :: :: :: :::::::: ::::: :: ::::::
b7995  GCTGCTGATGATACTATCGGTCAGCTGATCGCTGAGGCTATGGAGAAGGTAACTGCTGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b3114  GGTGTTATCACCATTGAAGAATCCAAGACTGCCGAAACATACTCCGAAGTTGTTGAAGGT
       :: ::::::::  : ::::: :: ::::: :: :: :: :::  ::: :::::::: :::
b7995  GGCGTTATCACTCTGGAAGAGTCAAAGACAGCTGAGACTTACAGCGAGGTTGTTGAGGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b3114  ATGCAGTTCGACAGAGGCTACATCACACCTTACATGGTTACTGATACCGATAAGATGGAA
       ::::::::::::::::: ::: :::  ::::::::::: :: ::::::::::::::::::
b7995  ATGCAGTTCGACAGAGGATACCTCAGCCCTTACATGGTAACAGATACCGATAAGATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b3114  GCCGTTATTGATGATGCTTACATTCTTATCACAGACAAGAAGATCTCCTCTATCCAGGAA
       :: ::  : :: ::::::    : :::::::: :: :::::::::  :  ::: ::::: 
b7995  GCTGTACTGGACGATGCTCTGGTACTTATCACTGATAAGAAGATCGGCAATATGCAGGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b3114  CTTCTTCCGCTCCTCGAACAGATCGTAAAGTCAGGCAAGAAGCTTGTTATCATTGCAGAA
        : :: :: :: :: :: :::::::::::    :::::::::::  : ::::: :: :: 
b7995  ATACTCCCACTGCTGGAGCAGATCGTAAAAATGGGCAAGAAGCTCCTCATCATCGCTGAG
              430       440       450       460       470       480

              490       500       510       520       530       540
b3114  GACATTGAGGGCGAAGCACTTTCCACACTTATCGTAAACAAGCTCAGAGGAACATTCACC
       ::: :::::::::: :: ::   : :::: ::  : :::::::: ::::: :  ::::: 
b7995  GACGTTGAGGGCGAGGCTCTGAGCTCACTGATACTCAACAAGCTGAGAGGCATCTTCACT
              490       500       510       520       530       540

              550  
b3114  TGTGTAGCTGTT
       ::::: ::::: 
b7995  TGTGTTGCTGTA
              550  

</pre>
<hr>
<A name=b34892>
<pre>
>><a onClick="window.open('getRecord.php?id=b34892',
                                'cpndb_record'); return false;" href="getRecord.php?id=b34892" target=_"blank">b34892</a> NZ_NIOI01000002  Pseudoclostridium  thermosucci  (552 nt)
 initn: 1518 init1: 1518 opt: 1518  Z-score: 85.4  bits: 25.6 E(): 1.1e+02
banded Smith-Waterman score: 1518; 75.0% identity (75.0% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b3114  GCTACTCTTCTTGCACAGGCTCTTATCAGAGAAGGTATGAAGAACATCGCAGCAGGTGCT
       :::::::: :: :: :::::: : :: :: :::::: :::: ::: : :::::::: :::
b34892 GCTACTCTGCTCGCTCAGGCTATAATAAGGGAAGGTCTGAAAAACGTAGCAGCAGGCGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b3114  AACCCGATGATCGTCCGCAAGGGTATGGCAAAGGCTGTTGACACAGCTGTTGAAGCTATC
       :: :: :::::  ::   :::::::::::    ::::::::  :::::::::::: ::: 
b34892 AATCCCATGATACTCAAGAAGGGTATGGCTGCAGCTGTTGAAGCAGCTGTTGAAGGTATA
               70        80        90       100       110       120

              130       140       150       160       170       180
b3114  AAGGCTAACTCCGTTCAGGTTTCGGGCTCCGATGACATTGCAAGCGTTGCTGCAAACTCT
       ::::    :  :    ::::    :::   :: :: :::::::: :: ::: : :  :::
b34892 AAGGAAGTCAGCCGCAAGGTAAAAGGCAAGGAAGATATTGCAAGGGTAGCTTCCATATCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b3114  GCTGCTGATGAAAATGTCGGCAAGCTCATTGCAGAAGCTATGGAAAAGGTTACCGCTGAC
       :::   ::::::  : : ::::  :: :: :: :: ::::::::::::::::::  ::::
b34892 GCTAACGATGAAGTTATAGGCAGCCTGATAGCTGATGCTATGGAAAAGGTTACCAATGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b3114  GGTGTTATCACCATTGAAGAATCCAAGACTGCCGAAACATACTCCGAAGTTGTTGAAGGT
       :: ::::::::  : ::::: :: :::::    :  ::: ::  ::::::::::::::::
b34892 GGGGTTATCACTGTGGAAGAGTCAAAGACCATGGGTACAAACCTCGAAGTTGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b3114  ATGCAGTTCGACAGAGGCTACATCACACCTTACATGGTTACTGATACCGATAAGATGGAA
       :::::::: :::::::: :: ::  :: :::::::::: :: :: :: :: :::::::::
b34892 ATGCAGTTTGACAGAGGATATATTTCAGCTTACATGGTAACAGACACTGAAAAGATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b3114  GCCGTTATTGATGATGCTTACATTCTTATCACAGACAAGAAGATCTCCTCTATCCAGGAA
       :: ::: :::::::: : :: :: :: :: :::::::::::: :   :  ::: ::::: 
b34892 GCTGTTCTTGATGATCCATATATACTCATTACAGACAAGAAGTTAAGCAATATTCAGGAC
              370       380       390       400       410       420

              430       440       450       460       470       480
b3114  CTTCTTCCGCTCCTCGAACAGATCGTAAAGTCAGGCAAGAAGCTTGTTATCATTGCAGAA
        : :: :: :: ::::: ::::::::: ::   ::::::::::: ::::: :: :: :: 
b34892 TTGCTGCCACTGCTCGAGCAGATCGTACAGCAGGGCAAGAAGCTGGTTATAATCGCTGAG
              430       440       450       460       470       480

              490       500       510       520       530       540
b3114  GACATTGAGGGCGAAGCACTTTCCACACTTATCGTAAACAAGCTCAGAGGAACATTCACC
       ::  :::: :::::::: ::::: :: ::: :  : :::::::: ::::: :::::::: 
b34892 GATGTTGAAGGCGAAGCTCTTTCAACTCTTGTACTTAACAAGCTGAGAGGTACATTCACA
              490       500       510       520       530       540

              550  
b3114  TGTGTAGCTGTT
       :: :::::::::
b34892 TGCGTAGCTGTT
              550  

</pre>
<hr>
<A name=b28755>
<pre>
>><a onClick="window.open('getRecord.php?id=b28755',
                                'cpndb_record'); return false;" href="getRecord.php?id=b28755" target=_"blank">b28755</a> NZ_FTRU01000008 Negativibacillus massiliensis M  (552 nt)
 initn: 1438 init1: 1438 opt: 1512  Z-score: 85.1  bits: 25.6 E(): 1.2e+02
banded Smith-Waterman score: 1512; 75.4% identity (75.4% similar) in 552 nt overlap (1-551:1-551)
<p>

               10        20        30        40        50        60
b3114  GCTACTCTTCTTGCACAGGCTCTTATCAGAGAAGGTATGAAGAACATCGCAGCAGGTGCT
       ::::: :: ::::: ::::::::  :  : ::::::::::::::: :  : :: ::::::
b28755 GCTACCCTGCTTGCTCAGGCTCTGGTTCGCGAAGGTATGAAGAACGTTACTGCTGGTGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b3114  AACCCGATGATCGTCCGCAAGGGTATGGCAAAGGCTGTTGACACAGCTGTTGAAGCTATC
       ::::: ::: :  ::   :: :::::    :: :: :::::::: :::::  ::::: : 
b28755 AACCCAATGGTACTCAAAAAAGGTATCCAGAAAGCAGTTGACACCGCTGTAAAAGCTGTT
               70        80        90       100       110       120

              130       140       150       160       170          
b3114  AAGGCTAACTCCGTTCAGGTTTCGGGCTCCGATGACATTGCAAGCGTTGCTGCAAACT-C
          :: ::::::    ::::    ::::: : ::: :: ::::: :::::: :    : :
b28755 GTTGCAAACTCCCAGAAGGTAAACGGCTCTGCTGATATCGCAAGAGTTGCTACCGTTTCC
              130       140       150       160       170       180

     180       190       200       210       220       230         
b3114  TGCTGCTGATGAAAATGTCGGCAAGCTCATTGCAGAAGCTATGGAAAAGGTTACCGCTGA
       ::: :: ::::::    ::::::: :: :: ::::::::::::::::: ::: :::::::
b28755 TGCGGC-GATGAAGTAATCGGCAACCTGATCGCAGAAGCTATGGAAAAAGTTTCCGCTGA
               190       200       210       220       230         

     240       250       260       270       280       290         
b3114  CGGTGTTATCACCATTGAAGAATCCAAGACTGCCGAAACATACTCCGAAGTTGTTGAAGG
       ::: ::::::::  : :::::::::::::: :: ::::: ::  ::::::: :: :::::
b28755 CGGCGTTATCACTCTGGAAGAATCCAAGACCGCTGAAACCTATACCGAAGTAGTAGAAGG
     240       250       260       270       280       290         

     300       310       320       330       340       350         
b3114  TATGCAGTTCGACAGAGGCTACATCACACCTTACATGGTTACTGATACCGATAAGATGGA
       ::::::::: ::: : ::::::::: : :: :::::::: :: ::::: :: ::::::::
b28755 TATGCAGTTTGACCGCGGCTACATCTCCCCATACATGGTAACCGATACTGACAAGATGGA
     300       310       320       330       340       350         

     360       370       380       390       400       410         
b3114  AGCCGTTATTGATGATGCTTACATTCTTATCACAGACAAGAAGATCTCCTCTATCCAGGA
       ::: ::: : :::::::::    : :: ::::: :::::::::::::::   :: :::::
b28755 AGCTGTTCTGGATGATGCTCTGCTGCTCATCACCGACAAGAAGATCTCCAACATTCAGGA
     360       370       380       390       400       410         

     420       430       440       450       460       470         
b3114  ACTTCTTCCGCTCCTCGAACAGATCGTAAAGTCAGGCAAGAAGCTTGTTATCATTGCAGA
       : : :: :: :: ::::::::::::::  :::: :::::::: ::  : ::::: :: ::
b28755 AATCCTGCCTCTGCTCGAACAGATCGTTCAGTCCGGCAAGAAACTGCTCATCATCGCTGA
     420       430       440       450       460       470         

     480       490       500       510       520       530         
b3114  AGACATTGAGGGCGAAGCACTTTCCACACTTATCGTAAACAAGCTCAGAGGAACATTCAC
        ::::: :: :::::::: ::  :::: ::  :  : ::::: ::  : :: :: :::::
b28755 GGACATCGAAGGCGAAGCTCTCACCACCCTGCTGCTGAACAAACTGCGTGGTACCTTCAC
     480       490       500       510       520       530         

     540       550  
b3114  CTGTGTAGCTGTT
       ::: :: :: :: 
b28755 CTGCGTTGCAGTA
     540       550  

</pre>
<hr>
<A name=b29028>
<pre>
>><a onClick="window.open('getRecord.php?id=b29028',
                                'cpndb_record'); return false;" href="getRecord.php?id=b29028" target=_"blank">b29028</a> NZ_FTRU01000008 Negativibacillus massiliensis M  (552 nt)
 initn: 1438 init1: 1438 opt: 1512  Z-score: 85.1  bits: 25.6 E(): 1.2e+02
banded Smith-Waterman score: 1512; 75.4% identity (75.4% similar) in 552 nt overlap (1-551:1-551)
<p>

               10        20        30        40        50        60
b3114  GCTACTCTTCTTGCACAGGCTCTTATCAGAGAAGGTATGAAGAACATCGCAGCAGGTGCT
       ::::: :: ::::: ::::::::  :  : ::::::::::::::: :  : :: ::::::
b29028 GCTACCCTGCTTGCTCAGGCTCTGGTTCGCGAAGGTATGAAGAACGTTACTGCTGGTGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b3114  AACCCGATGATCGTCCGCAAGGGTATGGCAAAGGCTGTTGACACAGCTGTTGAAGCTATC
       ::::: ::: :  ::   :: :::::    :: :: :::::::: :::::  ::::: : 
b29028 AACCCAATGGTACTCAAAAAAGGTATCCAGAAAGCAGTTGACACCGCTGTAAAAGCTGTT
               70        80        90       100       110       120

              130       140       150       160       170          
b3114  AAGGCTAACTCCGTTCAGGTTTCGGGCTCCGATGACATTGCAAGCGTTGCTGCAAACT-C
          :: ::::::    ::::    ::::: : ::: :: ::::: :::::: :    : :
b29028 GTTGCAAACTCCCAGAAGGTAAACGGCTCTGCTGATATCGCAAGAGTTGCTACCGTTTCC
              130       140       150       160       170       180

     180       190       200       210       220       230         
b3114  TGCTGCTGATGAAAATGTCGGCAAGCTCATTGCAGAAGCTATGGAAAAGGTTACCGCTGA
       ::: :: ::::::    ::::::: :: :: ::::::::::::::::: ::: :::::::
b29028 TGCGGC-GATGAAGTAATCGGCAACCTGATCGCAGAAGCTATGGAAAAAGTTTCCGCTGA
               190       200       210       220       230         

     240       250       260       270       280       290         
b3114  CGGTGTTATCACCATTGAAGAATCCAAGACTGCCGAAACATACTCCGAAGTTGTTGAAGG
       ::: ::::::::  : :::::::::::::: :: ::::: ::  ::::::: :: :::::
b29028 CGGCGTTATCACTCTGGAAGAATCCAAGACCGCTGAAACCTATACCGAAGTAGTAGAAGG
     240       250       260       270       280       290         

     300       310       320       330       340       350         
b3114  TATGCAGTTCGACAGAGGCTACATCACACCTTACATGGTTACTGATACCGATAAGATGGA
       ::::::::: ::: : ::::::::: : :: :::::::: :: ::::: :: ::::::::
b29028 TATGCAGTTTGACCGCGGCTACATCTCCCCATACATGGTAACCGATACTGACAAGATGGA
     300       310       320       330       340       350         

     360       370       380       390       400       410         
b3114  AGCCGTTATTGATGATGCTTACATTCTTATCACAGACAAGAAGATCTCCTCTATCCAGGA
       ::: ::: : :::::::::    : :: ::::: :::::::::::::::   :: :::::
b29028 AGCTGTTCTGGATGATGCTCTGCTGCTCATCACCGACAAGAAGATCTCCAACATTCAGGA
     360       370       380       390       400       410         

     420       430       440       450       460       470         
b3114  ACTTCTTCCGCTCCTCGAACAGATCGTAAAGTCAGGCAAGAAGCTTGTTATCATTGCAGA
       : : :: :: :: ::::::::::::::  :::: :::::::: ::  : ::::: :: ::
b29028 AATCCTGCCTCTGCTCGAACAGATCGTTCAGTCCGGCAAGAAACTGCTCATCATCGCTGA
     420       430       440       450       460       470         

     480       490       500       510       520       530         
b3114  AGACATTGAGGGCGAAGCACTTTCCACACTTATCGTAAACAAGCTCAGAGGAACATTCAC
        ::::: :: :::::::: ::  :::: ::  :  : ::::: ::  : :: :: :::::
b29028 GGACATCGAAGGCGAAGCTCTCACCACCCTGCTGCTGAACAAACTGCGTGGTACCTTCAC
     480       490       500       510       520       530         

     540       550  
b3114  CTGTGTAGCTGTT
       ::: :: :: :: 
b29028 CTGCGTTGCAGTA
     540       550  

</pre>
<hr>
<A name=b26859>
<pre>
>><a onClick="window.open('getRecord.php?id=b26859',
                                'cpndb_record'); return false;" href="getRecord.php?id=b26859" target=_"blank">b26859</a> NZ_KB907525 Eubacterium siraeum DSM 15702        (552 nt)
 initn: 1479 init1: 1479 opt: 1510  Z-score: 85.1  bits: 25.5 E(): 1.2e+02
banded Smith-Waterman score: 1510; 75.5% identity (75.5% similar) in 554 nt overlap (1-551:1-551)
<p>

               10        20        30        40        50        60
b3114  GCTACTCTTCTTGCACAGGCTCTTATCAGAGAAGGTATGAAGAACATCGCAGCAGGTGCT
       :::::::: :: :: ::::::::::::::::: :::::::::::::: :: ::::: :::
b26859 GCTACTCTGCTCGCTCAGGCTCTTATCAGAGAGGGTATGAAGAACATTGCCGCAGGCGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b3114  AACCCGATGATCGTCCGCAAGGGTATGGCAAAGGCTGTTGACACAGCTGTTGAAGCTATC
       ::::: :::   ::       :::::  ::::::: :::::: : :: :: : ::  :: 
b26859 AACCCTATGGATGTTAAGCGTGGTATCTCAAAGGCAGTTGACTCGGCAGTAGCAGAGATA
               70        80        90       100       110       120

              130        140         150       160       170       
b3114  AAGGCTAACTCCGTTCAGG-TTTCGGG--CTCCGATGACATTGCAAGCGTTGCTGCAAAC
       :::   :: ::     ::: : ::: :  :  ::::: ::::::  : :: ::: ::   
b26859 AAGAAGAATTC---AAAGGCTATCGAGAACAGCGATGGCATTGCCCGTGTAGCTACAGTT
              130          140       150       160       170       

       180       190       200       210       220       230       
b3114  TCTGCTGCTGATGAAAATGTCGGCAAGCTCATTGCAGAAGCTATGGAAAAGGTTACCGCT
       ::  : : ::: ::::  :: :: ::::: :::::::: :::::::::::::::::  : 
b26859 TCATCGGGTGACGAAACAGTAGGTAAGCTGATTGCAGAGGCTATGGAAAAGGTTACAACA
       180       190       200       210       220       230       

       240       250       260       270       280       290       
b3114  GACGGTGTTATCACCATTGAAGAATCCAAGACTGCCGAAACATACTCCGAAGTTGTTGAA
       ::::: ::: : ::  ::::::::  :::::: :: :::::::::  :::::: ::::::
b26859 GACGGCGTTGTTACTCTTGAAGAAGGCAAGACAGCAGAAACATACAGCGAAGTCGTTGAA
       240       250       260       270       280       290       

       300       310       320       330       340       350       
b3114  GGTATGCAGTTCGACAGAGGCTACATCACACCTTACATGGTTACTGATACCGATAAGATG
       ::::::::::::::::::::::::::  :::::::: : :  :: ::::: :::::::::
b26859 GGTATGCAGTTCGACAGAGGCTACATTTCACCTTACTTCGCAACAGATACAGATAAGATG
       300       310       320       330       340       350       

       360       370       380       390       400       410       
b3114  GAAGCCGTTATTGATGATGCTTACATTCTTATCACAGACAAGAAGATCTCCTCTATCCAG
         :::     :::: ::::::::::: ::::::::::::::::::::   :   :: :::
b26859 ACAGCTAACCTTGACGATGCTTACATCCTTATCACAGACAAGAAGATAAGCAACATTCAG
       360       370       380       390       400       410       

       420       430       440       450       460       470       
b3114  GAACTTCTTCCGCTCCTCGAACAGATCGTAAAGTCAGGCAAGAAGCTTGTTATCATTGCA
       ::  :::: ::  : :: :::::: ::::: :: :::: ::::::::  ::::::: :: 
b26859 GACGTTCTGCCCTTACTTGAACAGGTCGTACAGGCAGGTAAGAAGCTGCTTATCATCGCT
       420       430       440       450       460       470       

       480       490       500       510       520       530       
b3114  GAAGACATTGAGGGCGAAGCACTTTCCACACTTATCGTAAACAAGCTCAGAGGAACATTC
       :: ::::: :::::::: :: ::: : ::::::::: : ::::::::  : :: ::::::
b26859 GAGGACATCGAGGGCGAGGCTCTTACAACACTTATCCTCAACAAGCTGCGTGGTACATTC
       480       490       500       510       520       530       

       540       550  
b3114  ACCTGTGTAGCTGTT
          :: :::: ::: 
b26859 GTATGCGTAGGTGTA
       540       550  

</pre>
<hr>
<A name=b10859>
<pre>
>><a onClick="window.open('getRecord.php?id=b10859',
                                'cpndb_record'); return false;" href="getRecord.php?id=b10859" target=_"blank">b10859</a> NZ_ABCA03000029 Eubacterium siraeum DSM15702     (552 nt)
 initn: 1479 init1: 1479 opt: 1510  Z-score: 85.1  bits: 25.5 E(): 1.2e+02
banded Smith-Waterman score: 1510; 75.5% identity (75.5% similar) in 554 nt overlap (1-551:1-551)
<p>

               10        20        30        40        50        60
b3114  GCTACTCTTCTTGCACAGGCTCTTATCAGAGAAGGTATGAAGAACATCGCAGCAGGTGCT
       :::::::: :: :: ::::::::::::::::: :::::::::::::: :: ::::: :::
b10859 GCTACTCTGCTCGCTCAGGCTCTTATCAGAGAGGGTATGAAGAACATTGCCGCAGGCGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b3114  AACCCGATGATCGTCCGCAAGGGTATGGCAAAGGCTGTTGACACAGCTGTTGAAGCTATC
       ::::: :::   ::       :::::  ::::::: :::::: : :: :: : ::  :: 
b10859 AACCCTATGGATGTTAAGCGTGGTATCTCAAAGGCAGTTGACTCGGCAGTAGCAGAGATA
               70        80        90       100       110       120

              130        140         150       160       170       
b3114  AAGGCTAACTCCGTTCAGG-TTTCGGG--CTCCGATGACATTGCAAGCGTTGCTGCAAAC
       :::   :: ::     ::: : ::: :  :  ::::: ::::::  : :: ::: ::   
b10859 AAGAAGAATTC---AAAGGCTATCGAGAACAGCGATGGCATTGCCCGTGTAGCTACAGTT
              130          140       150       160       170       

       180       190       200       210       220       230       
b3114  TCTGCTGCTGATGAAAATGTCGGCAAGCTCATTGCAGAAGCTATGGAAAAGGTTACCGCT
       ::  : : ::: ::::  :: :: ::::: :::::::: :::::::::::::::::  : 
b10859 TCATCGGGTGACGAAACAGTAGGTAAGCTGATTGCAGAGGCTATGGAAAAGGTTACAACA
       180       190       200       210       220       230       

       240       250       260       270       280       290       
b3114  GACGGTGTTATCACCATTGAAGAATCCAAGACTGCCGAAACATACTCCGAAGTTGTTGAA
       ::::: ::: : ::  ::::::::  :::::: :: :::::::::  :::::: ::::::
b10859 GACGGCGTTGTTACTCTTGAAGAAGGCAAGACAGCAGAAACATACAGCGAAGTCGTTGAA
       240       250       260       270       280       290       

       300       310       320       330       340       350       
b3114  GGTATGCAGTTCGACAGAGGCTACATCACACCTTACATGGTTACTGATACCGATAAGATG
       ::::::::::::::::::::::::::  :::::::: : :  :: ::::: :::::::::
b10859 GGTATGCAGTTCGACAGAGGCTACATTTCACCTTACTTCGCAACAGATACAGATAAGATG
       300       310       320       330       340       350       

       360       370       380       390       400       410       
b3114  GAAGCCGTTATTGATGATGCTTACATTCTTATCACAGACAAGAAGATCTCCTCTATCCAG
         :::     :::: ::::::::::: ::::::::::::::::::::   :   :: :::
b10859 ACAGCTAACCTTGACGATGCTTACATCCTTATCACAGACAAGAAGATAAGCAACATTCAG
       360       370       380       390       400       410       

       420       430       440       450       460       470       
b3114  GAACTTCTTCCGCTCCTCGAACAGATCGTAAAGTCAGGCAAGAAGCTTGTTATCATTGCA
       ::  :::: ::  : :: :::::: ::::: :: :::: ::::::::  ::::::: :: 
b10859 GACGTTCTGCCCTTACTTGAACAGGTCGTACAGGCAGGTAAGAAGCTGCTTATCATCGCT
       420       430       440       450       460       470       

       480       490       500       510       520       530       
b3114  GAAGACATTGAGGGCGAAGCACTTTCCACACTTATCGTAAACAAGCTCAGAGGAACATTC
       :: ::::: :::::::: :: ::: : ::::::::: : ::::::::  : :: ::::::
b10859 GAGGACATCGAGGGCGAGGCTCTTACAACACTTATCCTCAACAAGCTGCGTGGTACATTC
       480       490       500       510       520       530       

       540       550  
b3114  ACCTGTGTAGCTGTT
          :: :::: ::: 
b10859 GTATGCGTAGGTGTA
       540       550  

</pre>
<hr>
<A name=b34890>
<pre>
>><a onClick="window.open('getRecord.php?id=b34890',
                                'cpndb_record'); return false;" href="getRecord.php?id=b34890" target=_"blank">b34890</a> NZ_NIOK01000025 Pseudoclostridium thermosuccino  (552 nt)
 initn: 1509 init1: 1509 opt: 1509  Z-score: 85.0  bits: 25.5 E(): 1.2e+02
banded Smith-Waterman score: 1509; 74.8% identity (74.8% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b3114  GCTACTCTTCTTGCACAGGCTCTTATCAGAGAAGGTATGAAGAACATCGCAGCAGGTGCT
       :::::::: :: :: :::::: : :: :: :::::: :::: ::: : :::::::: :::
b34890 GCTACTCTGCTCGCTCAGGCTATAATAAGGGAAGGTCTGAAAAACGTAGCAGCAGGCGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b3114  AACCCGATGATCGTCCGCAAGGGTATGGCAAAGGCTGTTGACACAGCTGTTGAAGCTATC
       :: :: :::::  ::   :::::::::::    ::::::::  :::::::::::: ::: 
b34890 AATCCCATGATACTCAAGAAGGGTATGGCTGCAGCTGTTGAAGCAGCTGTTGAAGGTATA
               70        80        90       100       110       120

              130       140       150       160       170       180
b3114  AAGGCTAACTCCGTTCAGGTTTCGGGCTCCGATGACATTGCAAGCGTTGCTGCAAACTCT
       ::::    :  :    ::::    :::   :: :: :::::::: :: ::: : :  :::
b34890 AAGGAAGTCAGCCGCAAGGTAAAAGGCAAGGAAGATATTGCAAGGGTAGCTTCCATATCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b3114  GCTGCTGATGAAAATGTCGGCAAGCTCATTGCAGAAGCTATGGAAAAGGTTACCGCTGAC
       :::   ::::::  : : ::::  :: :: :: :: ::::::::::::::::::  ::::
b34890 GCTAACGATGAAGTTATAGGCAGCCTGATAGCTGATGCTATGGAAAAGGTTACCAATGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b3114  GGTGTTATCACCATTGAAGAATCCAAGACTGCCGAAACATACTCCGAAGTTGTTGAAGGT
       :: ::::::::  : ::::: :: :::::    :  ::: ::  ::::::::::::::::
b34890 GGGGTTATCACTGTGGAAGAGTCAAAGACCATGGGCACAAACCTCGAAGTTGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b3114  ATGCAGTTCGACAGAGGCTACATCACACCTTACATGGTTACTGATACCGATAAGATGGAA
       :::::::: :::::::: :: ::  :: :::::::::: :: :: :: :: :::::::::
b34890 ATGCAGTTTGACAGAGGATATATTTCAGCTTACATGGTAACAGACACTGAAAAGATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b3114  GCCGTTATTGATGATGCTTACATTCTTATCACAGACAAGAAGATCTCCTCTATCCAGGAA
       :: ::: :::::::: : :: :: :: :: :::::::::::: :   :  ::: ::::: 
b34890 GCTGTTCTTGATGATCCATATATACTCATTACAGACAAGAAGTTAAGCAATATTCAGGAC
              370       380       390       400       410       420

              430       440       450       460       470       480
b3114  CTTCTTCCGCTCCTCGAACAGATCGTAAAGTCAGGCAAGAAGCTTGTTATCATTGCAGAA
        : :: :: :: ::::: ::::::::: ::   ::::::::::: ::::: :: :: :: 
b34890 TTGCTGCCACTGCTCGAGCAGATCGTACAGCAGGGCAAGAAGCTGGTTATAATCGCTGAG
              430       440       450       460       470       480

              490       500       510       520       530       540
b3114  GACATTGAGGGCGAAGCACTTTCCACACTTATCGTAAACAAGCTCAGAGGAACATTCACC
       ::  :::: :::::::: ::::: :: ::  :  : :::::::: ::::: :::::::: 
b34890 GATGTTGAAGGCGAAGCTCTTTCAACTCTCGTACTTAACAAGCTGAGAGGTACATTCACA
              490       500       510       520       530       540

              550  
b3114  TGTGTAGCTGTT
       :: :::::::::
b34890 TGCGTAGCTGTT
              550  

</pre>
<hr>
<A name=b6855>
<pre>
>><a onClick="window.open('getRecord.php?id=b6855',
                                'cpndb_record'); return false;" href="getRecord.php?id=b6855" target=_"blank">b6855</a> AY691294 Ruminococcus bromii ATCC 27255           (552 nt)
 initn: 1423 init1: 1423 opt: 1504  Z-score: 84.8  bits: 25.5 E(): 1.2e+02
banded Smith-Waterman score: 1504; 74.8% identity (74.8% similar) in 551 nt overlap (1-551:1-551)
<p>

               10        20        30        40        50        60
b3114  GCTACTCTTCTTGCACAGGCTCTTATCAGAGAAGGTATGAAGAACATCGCAGCAGGTGCT
       ::::: :: ::::: ::::::::::::::::: :: ::::::::  :  : ::::: :::
b6855  GCTACACTCCTTGCTCAGGCTCTTATCAGAGAGGGAATGAAGAATGTAACTGCAGGCGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b3114  AACCCGATGATCGTCCGCAAGGGTATGGCAAAGGCTGTTGACACAGCTGTTGAAGCTATC
       ::::: ::: :  ::   :::::::: ::: : :: ::: :    :: ::::: ::: : 
b6855  AACCCTATGGTACTCAAAAAGGGTATTGCAGATGCCGTTAATGTTGCAGTTGAGGCTGTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b3114  AAGGCTAACTCCGTTCAGGTTTCGGGCTCCGATGACATTGCAAGCGTTGCTGCAAACTCT
       :::   :::  :   ::::: :::::  : :: :: :: ::::: :::::  ::   :: 
b6855  AAGAAGAACAGCAAGCAGGTATCGGGTACAGACGATATCGCAAGAGTTGCCACAGTTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b3114  GCTGCTGATGAAAATGTCGGCAAGCTCATTGCAGAAGCTATGGAAAAGGTTACCGCTGAC
        :    ::::::  : :::: :::::::::::::: :::::::::::::::::  : :::
b6855  TCACAGGATGAATTTATCGGTAAGCTCATTGCAGAGGCTATGGAAAAGGTTACAACAGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b3114  GGTGTTATCACCATTGAAGAATCCAAGACTGCCGAAACATACTCCGAAGTTGTTGAAGGT
       :::::::::::  :::: :: :: ::::: ::::::::::::   :: :::::::: :::
b6855  GGTGTTATCACAGTTGAGGAGTCAAAGACAGCCGAAACATACAGTGAGGTTGTTGAGGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b3114  ATGCAGTTCGACAGAGGCTACATCACACCTTACATGGTTACTGATACCGATAAGATGGAA
       :::  :::::::::::: :::::: : ::::: ::::: :: ::::: ::::::::::  
b6855  ATGATGTTCGACAGAGGTTACATCGCTCCTTATATGGTAACAGATACAGATAAGATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b3114  GCCGTTATTGATGATGCTTACATTCTTATCACAGACAAGAAGATCTCCTCTATCCAGGAA
       :: :   ::::  :: :    :: ::::::::::: :::::::: ::  :::  ::::::
b6855  GCAGAGCTTGACAATCCGCTTATCCTTATCACAGATAAGAAGATTTCTACTACACAGGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b3114  CTTCTTCCGCTCCTCGAACAGATCGTAAAGTCAGGCAAGAAGCTTGTTATCATTGCAGAA
        :::: :: :: :: :: ::::: ::  ::   :: ::::::::  :::::::::: :::
b6855  ATTCTCCCACTTCTTGAGCAGATTGTTCAGATGGGTAAGAAGCTCCTTATCATTGCTGAA
              430       440       450       460       470       480

              490       500       510       520       530       540
b3114  GACATTGAGGGCGAAGCACTTTCCACACTTATCGTAAACAAGCTCAGAGGAACATTCACC
       ::  :::::::::: :: ::: : :: ::  :  : ::::: :::::::: :::::::: 
b6855  GATGTTGAGGGCGAGGCTCTTACAACTCTCGTACTTAACAAACTCAGAGGCACATTCACT
              490       500       510       520       530       540

              550  
b3114  TGTGTAGCTGTT
       ::::: :: :: 
b6855  TGTGTTGCAGTA
              550  

</pre>
<hr>
<A name=b26802>
<pre>
>><a onClick="window.open('getRecord.php?id=b26802',
                                'cpndb_record'); return false;" href="getRecord.php?id=b26802" target=_"blank">b26802</a> NZ_KB911066 [Clostridium] sporosphaeroides VPI   (552 nt)
 initn: 1426 init1: 1426 opt: 1504  Z-score: 84.8  bits: 25.5 E(): 1.2e+02
banded Smith-Waterman score: 1504; 74.8% identity (74.8% similar) in 551 nt overlap (1-551:1-551)
<p>

               10        20        30        40        50        60
b3114  GCTACTCTTCTTGCACAGGCTCTTATCAGAGAAGGTATGAAGAACATCGCAGCAGGTGCT
       ::::: :: :: :::::::::::  :  : :: :::::::::::  : :: :: :: :::
b26802 GCTACCCTGCTGGCACAGGCTCTGGTTCGCGAGGGTATGAAGAATCTGGCGGCCGGCGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b3114  AACCCGATGATCGTCCGCAAGGGTATGGCAAAGGCTGTTGACACAGCTGTTGAAGCTATC
       ::::: :::::: : :::::::: :::   ::::: :::::: : :::::  :::: :::
b26802 AACCCCATGATCCTGCGCAAGGGAATGCAGAAGGCGGTTGACGCCGCTGTGAAAGCGATC
               70        80        90       100       110       120

              130       140       150       160       170       180
b3114  AAGGCTAACTCCGTTCAGGTTTCGGGCTCCGATGACATTGCAAGCGTTGCTGCAAACTCT
       :  :  :: :::    ::::::: :::::::: :: :: :: :: :: ::: :    :: 
b26802 ATTGACAATTCCAAAAAGGTTTCCGGCTCCGACGATATCGCGAGAGTCGCTACCGTTTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b3114  GCTGCTGATGAAAATGTCGGCAAGCTCATTGCAGAAGCTATGGAAAAGGTTACCGCTGAC
        : :: ::::::    :::::::::: :: :: ::::: ::::::::::: : : : :::
b26802 TCCGCGGATGAATTCATCGGCAAGCTGATCGCGGAAGCGATGGAAAAGGTCAGCTCCGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b3114  GGTGTTATCACCATTGAAGAATCCAAGACTGCCGAAACATACTCCGAAGTTGTTGAAGGT
       :: :: :::::  : :::::::::::::::::::: ::::::::::: ::::: :: :: 
b26802 GGCGTAATCACTGTGGAAGAATCCAAGACTGCCGAGACATACTCCGAGGTTGTCGAGGGC
              250       260       270       280       290       300

              310       320       330       340       350       360
b3114  ATGCAGTTCGACAGAGGCTACATCACACCTTACATGGTTACTGATACCGATAAGATGGAA
       :::::::: ::: : ::::: ::::: :: :: ::::: :: :: ::: :::::::::: 
b26802 ATGCAGTTTGACCGCGGCTATATCACCCCCTATATGGTAACCGACACCAATAAGATGGAG
              310       320       330       340       350       360

              370       380       390       400       410       420
b3114  GCCGTTATTGATGATGCTTACATTCTTATCACAGACAAGAAGATCTCCTCTATCCAGGAA
       ::::: :: :: :: :: :: :: :: :: :: :: :::::::: :::   :: ::::: 
b26802 GCCGTAATCGACGACGCCTATATCCTCATTACCGATAAGAAGATTTCCAACATTCAGGAG
              370       380       390       400       410       420

              430       440       450       460       470       480
b3114  CTTCTTCCGCTCCTCGAACAGATCGTAAAGTCAGGCAAGAAGCTTGTTATCATTGCAGAA
        :::: :: :: :::::    :::::: :::: :: ::::::::::: :: :: :: :: 
b26802 ATTCTGCCCCTGCTCGAGAGCATCGTACAGTCCGGTAAGAAGCTTGTGATAATCGCCGAG
              430       440       450       460       470       480

              490       500       510       520       530       540
b3114  GACATTGAGGGCGAAGCACTTTCCACACTTATCGTAAACAAGCTCAGAGGAACATTCACC
       :: ::::::::::: :: ::  :::: :: ::: : ::::::::  : :: :: :: :::
b26802 GATATTGAGGGCGAGGCGCTGACCACCCTGATCCTCAACAAGCTGCGCGGCACCTTTACC
              490       500       510       520       530       540

              550  
b3114  TGTGTAGCTGTT
       :: :: :  :: 
b26802 TGCGTTGGCGTG
              550  

</pre>
<hr>
<A name=b16655>
<pre>
>><a onClick="window.open('getRecord.php?id=b16655',
                                'cpndb_record'); return false;" href="getRecord.php?id=b16655" target=_"blank">b16655</a> FP929044 Eubacterium siraeum 70/3                (552 nt)
 initn: 1470 init1: 1470 opt: 1501  Z-score: 84.6  bits: 25.5 E(): 1.2e+02
banded Smith-Waterman score: 1501; 75.3% identity (75.3% similar) in 554 nt overlap (1-551:1-551)
<p>

               10        20        30        40        50        60
b3114  GCTACTCTTCTTGCACAGGCTCTTATCAGAGAAGGTATGAAGAACATCGCAGCAGGTGCT
       :::::::: :: :: ::::::::::::::::: :::::::::::::: :: ::::: :::
b16655 GCTACTCTGCTCGCTCAGGCTCTTATCAGAGAGGGTATGAAGAACATTGCCGCAGGCGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b3114  AACCCGATGATCGTCCGCAAGGGTATGGCAAAGGCTGTTGACACAGCTGTTGAAGCTATC
       ::::: :::   ::       :::::  ::::::: :::::: : :: :: : ::  :: 
b16655 AACCCTATGGATGTTAAGCGTGGTATCTCAAAGGCAGTTGACTCGGCAGTAGCAGAGATA
               70        80        90       100       110       120

              130        140         150       160       170       
b3114  AAGGCTAACTCCGTTCAGG-TTTCG--GGCTCCGATGACATTGCAAGCGTTGCTGCAAAC
       :::   :: ::     ::: : :::    :  ::::: ::::::  : :: ::: :    
b16655 AAGAAGAATTC---AAAGGCTATCGAAAACAGCGATGGCATTGCCCGTGTAGCTACTGTT
              130          140       150       160       170       

       180       190       200       210       220       230       
b3114  TCTGCTGCTGATGAAAATGTCGGCAAGCTCATTGCAGAAGCTATGGAAAAGGTTACCGCT
       ::  : : ::: ::::  :: :: ::::: :::::::: :::::::::::::::::  : 
b16655 TCATCGGGTGACGAAACAGTAGGTAAGCTGATTGCAGAGGCTATGGAAAAGGTTACAACA
       180       190       200       210       220       230       

       240       250       260       270       280       290       
b3114  GACGGTGTTATCACCATTGAAGAATCCAAGACTGCCGAAACATACTCCGAAGTTGTTGAA
       ::::::::: : ::  ::::::::  :::::: :: :::::::::  :::::: ::::::
b16655 GACGGTGTTGTTACTCTTGAAGAAGGCAAGACAGCAGAAACATACAGCGAAGTCGTTGAA
       240       250       260       270       280       290       

       300       310       320       330       340       350       
b3114  GGTATGCAGTTCGACAGAGGCTACATCACACCTTACATGGTTACTGATACCGATAAGATG
       ::::::::::::::::::::::::::  :::::::: : :  :: ::::: :::::::::
b16655 GGTATGCAGTTCGACAGAGGCTACATTTCACCTTACTTTGCAACAGATACAGATAAGATG
       300       310       320       330       340       350       

       360       370       380       390       400       410       
b3114  GAAGCCGTTATTGATGATGCTTACATTCTTATCACAGACAAGAAGATCTCCTCTATCCAG
         :::     ::::::: :::::::: ::::::::::::::::::::   :   :: :::
b16655 ACAGCTAACCTTGATGACGCTTACATCCTTATCACAGACAAGAAGATAAGCAACATTCAG
       360       370       380       390       400       410       

       420       430       440       450       460       470       
b3114  GAACTTCTTCCGCTCCTCGAACAGATCGTAAAGTCAGGCAAGAAGCTTGTTATCATTGCA
       ::  :::: ::  : :: :::::: ::::: :: :::: ::::::::  ::::::: :: 
b16655 GACGTTCTGCCCTTACTTGAACAGGTCGTACAGGCAGGTAAGAAGCTGCTTATCATCGCT
       420       430       440       450       460       470       

       480       490       500       510       520       530       
b3114  GAAGACATTGAGGGCGAAGCACTTTCCACACTTATCGTAAACAAGCTCAGAGGAACATTC
       :: ::::: :::::::: :: ::: : ::::::::: : ::::::::  : :: ::::::
b16655 GAGGACATCGAGGGCGAGGCTCTTACAACACTTATCCTCAACAAGCTGCGTGGTACATTC
       480       490       500       510       520       530       

       540       550  
b3114  ACCTGTGTAGCTGTT
          :: :::: ::: 
b16655 GTATGCGTAGGTGTA
       540       550  

</pre>
<hr>
<A name=b457>
<pre>
>><a onClick="window.open('getRecord.php?id=b457',
                                'cpndb_record'); return false;" href="getRecord.php?id=b457" target=_"blank">b457</a> Z68137 Clostridium thermocellum NCIMB 10682        (552 nt)
 initn: 1488 init1: 1488 opt: 1500  Z-score: 84.6  bits: 25.5 E(): 1.3e+02
banded Smith-Waterman score: 1500; 74.6% identity (74.6% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b3114  GCTACTCTTCTTGCACAGGCTCTTATCAGAGAAGGTATGAAGAACATCGCAGCAGGTGCT
       :: :: ::::::::::::::: : :::::::::::  : :::::: : ::::: ::::: 
b457   GCAACACTTCTTGCACAGGCTATAATCAGAGAAGGACTTAAGAACGTTGCAGCCGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b3114  AACCCGATGATCGTCCGCAAGGGTATGGCAAAGGCTGTTGACACAGCTGTTGAAGCTATC
       ::::::::: :  :    :::::::: ::::: ::::::::  : :: ::::::: ::::
b457   AACCCGATGCTTCTTAAAAAGGGTATAGCAAAAGCTGTTGATGCGGCAGTTGAAGGTATC
               70        80        90       100       110       120

              130       140       150       160       170       180
b3114  AAGGCTAACTCCGTTCAGGTTTCGGGCTCCGATGACATTGCAAGCGTTGCTGCAAACTCT
       ::::  : :  :    :::::   ::    :: :: :: ::::: :::::: :::  :: 
b457   AAGGAAATCAGCCAGAAGGTTAAAGGAAAAGAAGATATAGCAAGGGTTGCTTCAATTTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b3114  GCTGCTGATGAAAATGTCGGCAAGCTCATTGCAGAAGCTATGGAAAAGGTTACCGCTGAC
       ::   ::: :::  : : ::  :  : :: :: :: ::::::::::: :::::   ::::
b457   GCCAATGACGAAGTTATTGGTGAATTGATAGCCGATGCTATGGAAAAAGTTACAAATGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b3114  GGTGTTATCACCATTGAAGAATCCAAGACTGCCGAAACATACTCCGAAGTTGTTGAAGGT
       :::::::::::  :::::::: : :::::    :  ::: ::  :::: : :::::::::
b457   GGTGTTATCACTGTTGAAGAAGCAAAGACAATGGGCACAAACCTCGAAATAGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b3114  ATGCAGTTCGACAGAGGCTACATCACACCTTACATGGTTACTGATACCGATAAGATGGAA
       :::::::: :::::::: ::  :  :::: :::::::::::::: :: :: :::::::::
b457   ATGCAGTTTGACAGAGGTTATGTATCACCATACATGGTTACTGACACTGAAAAGATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b3114  GCCGTTATTGATGATGCTTACATTCTTATCACAGACAAGAAGATCTCCTCTATCCAGGAA
       :: ::: :::::::  ::::::: :: :: ::::::::::: ::   :  ::::::::: 
b457   GCTGTTCTTGATGAGCCTTACATCCTCATTACAGACAAGAAAATAAGCAATATCCAGGAC
              370       380       390       400       410       420

              430       440       450       460       470       480
b3114  CTTCTTCCGCTCCTCGAACAGATCGTAAAGTCAGGCAAGAAGCTTGTTATCATTGCAGAA
        :::: ::  : :: :::::::: ::  ::   :::::::: :: ::::::::::: :: 
b457   ATTCTCCCATTGCTGGAACAGATAGTTCAGCAGGGCAAGAAACTGGTTATCATTGCTGAG
              430       440       450       460       470       480

              490       500       510       520       530       540
b3114  GACATTGAGGGCGAAGCACTTTCCACACTTATCGTAAACAAGCTCAGAGGAACATTCACC
       ::  ::::::::::::: ::: : ::: :  : ::::::::  : ::::: :::::::: 
b457   GATGTTGAGGGCGAAGCTCTTGCAACATTGCTTGTAAACAAATTAAGAGGTACATTCACA
              490       500       510       520       530       540

              550  
b3114  TGTGTAGCTGTT
       :: :: ::::::
b457   TGCGTTGCTGTT
              550  

</pre>
<hr>
<A name=b29765>
<pre>
>><a onClick="window.open('getRecord.php?id=b29765',
                                'cpndb_record'); return false;" href="getRecord.php?id=b29765" target=_"blank">b29765</a> NZ_NHOC01000007 Butyricicoccus  sp. BB10  DSM 1  (552 nt)
 initn: 1444 init1: 1444 opt: 1500  Z-score: 84.6  bits: 25.5 E(): 1.3e+02
banded Smith-Waterman score: 1500; 74.6% identity (74.6% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b3114  GCTACTCTTCTTGCACAGGCTCTTATCAGAGAAGGTATGAAGAACATCGCAGCAGGTGCT
       :::::  :::: :: :::::: : ::::  :: :::::::::::: : :::::::: :: 
b29765 GCTACCGTTCTGGCTCAGGCTATCATCACTGAGGGTATGAAGAACGTTGCAGCAGGCGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b3114  AACCCGATGATCGTCCGCAAGGGTATGGCAAAGGCTGTTGACACAGCTGTTGAAGCTATC
       :: ::::::::  : ::::::::::: :: ::::  ::::  :: :: :::::::: :::
b29765 AATCCGATGATTATGCGCAAGGGTATCGCCAAGGGCGTTGCTACTGCGGTTGAAGCAATC
               70        80        90       100       110       120

              130       140       150       160       170       180
b3114  AAGGCTAACTCCGTTCAGGTTTCGGGCTCCGATGACATTGCAAGCGTTGCTGCAAACTCT
       :::: ::::::::   :  :   :::: ::   :: :::::  : ::::: :: :  :::
b29765 AAGGGTAACTCCGAGAACATCAAGGGCACCAGCGATATTGCTCGTGTTGCAGCGATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b3114  GCTGCTGATGAAAATGTCGGCAAGCTCATTGCAGAAGCTATGGAAAAGGTTACCGCTGAC
        :    :: :      ::::: : :: ::::: :: :: ::::: :::::: ::::::::
b29765 TCCAGCGACGTTGCAATCGGCGATCTGATTGCTGAGGCAATGGAGAAGGTTTCCGCTGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b3114  GGTGTTATCACCATTGAAGAATCCAAGACTGCCGAAACATACTCCGAAGTTGTTGAAGGT
       :: ::::: ::: : :: :: :::::::: :: :: :: :: :: ::: : :: ::::: 
b29765 GGCGTTATTACCGTCGAGGAGTCCAAGACCGCTGAGACCTATTCTGAAATCGTAGAAGGC
              250       260       270       280       290       300

              310       320       330       340       350       360
b3114  ATGCAGTTCGACAGAGGCTACATCACACCTTACATGGTTACTGATACCGATAAGATGGAA
       :::::::::::  : ::::::::::: :: :::::::: :: ::::::::::::::::: 
b29765 ATGCAGTTCGATCGCGGCTACATCACGCCGTACATGGTAACGGATACCGATAAGATGGAG
              310       320       330       340       350       360

              370       380       390       400       410       420
b3114  GCCGTTATTGATGATGCTTACATTCTTATCACAGACAAGAAGATCTCCTCTATCCAGGAA
       :: ::: : :::::::::   :: :: :: :: :: :::::::: :::   :: ::::: 
b29765 GCAGTTCTGGATGATGCTGTTATCCTGATTACCGATAAGAAGATTTCCAACATTCAGGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b3114  CTTCTTCCGCTCCTCGAACAGATCGTAAAGTCAGGCAAGAAGCTTGTTATCATTGCAGAA
       :: :: ::::: :: :: ::::: :: ::: : :::::::::::  : ::::::::::: 
b29765 CTGCTGCCGCTGCTGGAGCAGATTGTCAAGACCGGCAAGAAGCTGCTCATCATTGCAGAG
              430       440       450       460       470       480

              490       500       510       520       530       540
b3114  GACATTGAGGGCGAAGCACTTTCCACACTTATCGTAAACAAGCTCAGAGGAACATTCACC
       ::  : :: ::::::::::: :: :: ::  :  : ::::::::  : :: :: ::::::
b29765 GATCTGGAAGGCGAAGCACTGTCTACCCTGCTTCTGAACAAGCTGCGCGGCACCTTCACC
              490       500       510       520       530       540

              550  
b3114  TGTGTAGCTGTT
       ::::: :: :::
b29765 TGTGTTGCAGTT
              550  

</pre>
<hr>
<A name=b31343>
<pre>
>><a onClick="window.open('getRecord.php?id=b31343',
                                'cpndb_record'); return false;" href="getRecord.php?id=b31343" target=_"blank">b31343</a> NZ_ACVX01000031 Ruminiclostridium thermocellum   (552 nt)
 initn: 1488 init1: 1488 opt: 1500  Z-score: 84.6  bits: 25.5 E(): 1.3e+02
banded Smith-Waterman score: 1500; 74.6% identity (74.6% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b3114  GCTACTCTTCTTGCACAGGCTCTTATCAGAGAAGGTATGAAGAACATCGCAGCAGGTGCT
       :: :: ::::::::::::::: : :::::::::::  : :::::: : ::::: ::::: 
b31343 GCAACACTTCTTGCACAGGCTATAATCAGAGAAGGACTTAAGAACGTTGCAGCCGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b3114  AACCCGATGATCGTCCGCAAGGGTATGGCAAAGGCTGTTGACACAGCTGTTGAAGCTATC
       ::::::::: :  :    :::::::: ::::: ::::::::  : :: ::::::: ::::
b31343 AACCCGATGCTTCTTAAAAAGGGTATAGCAAAAGCTGTTGATGCGGCAGTTGAAGGTATC
               70        80        90       100       110       120

              130       140       150       160       170       180
b3114  AAGGCTAACTCCGTTCAGGTTTCGGGCTCCGATGACATTGCAAGCGTTGCTGCAAACTCT
       ::::  : :  :    :::::   ::    :: :: :: ::::: :::::: :::  :: 
b31343 AAGGAAATCAGCCAGAAGGTTAAAGGAAAAGAAGATATAGCAAGGGTTGCTTCAATTTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b3114  GCTGCTGATGAAAATGTCGGCAAGCTCATTGCAGAAGCTATGGAAAAGGTTACCGCTGAC
       ::   ::: :::  : : ::  :  : :: :: :: ::::::::::: :::::   ::::
b31343 GCCAATGACGAAGTTATTGGTGAATTGATAGCCGATGCTATGGAAAAAGTTACAAATGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b3114  GGTGTTATCACCATTGAAGAATCCAAGACTGCCGAAACATACTCCGAAGTTGTTGAAGGT
       :::::::::::  :::::::: : :::::    :  ::: ::  :::: : :::::::::
b31343 GGTGTTATCACTGTTGAAGAAGCAAAGACAATGGGCACAAACCTCGAAATAGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b3114  ATGCAGTTCGACAGAGGCTACATCACACCTTACATGGTTACTGATACCGATAAGATGGAA
       :::::::: :::::::: ::  :  :::: :::::::::::::: :: :: :::::::::
b31343 ATGCAGTTTGACAGAGGTTATGTATCACCATACATGGTTACTGACACTGAAAAGATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b3114  GCCGTTATTGATGATGCTTACATTCTTATCACAGACAAGAAGATCTCCTCTATCCAGGAA
       :: ::: :::::::  ::::::: :: :: ::::::::::: ::   :  ::::::::: 
b31343 GCTGTTCTTGATGAGCCTTACATCCTCATTACAGACAAGAAAATAAGCAATATCCAGGAC
              370       380       390       400       410       420

              430       440       450       460       470       480
b3114  CTTCTTCCGCTCCTCGAACAGATCGTAAAGTCAGGCAAGAAGCTTGTTATCATTGCAGAA
        :::: ::  : :: :::::::: ::  ::   :::::::: :: ::::::::::: :: 
b31343 ATTCTCCCATTGCTGGAACAGATAGTTCAGCAGGGCAAGAAACTGGTTATCATTGCTGAG
              430       440       450       460       470       480

              490       500       510       520       530       540
b3114  GACATTGAGGGCGAAGCACTTTCCACACTTATCGTAAACAAGCTCAGAGGAACATTCACC
       ::  ::::::::::::: ::: : ::: :  : ::::::::  : ::::: :::::::: 
b31343 GATGTTGAGGGCGAAGCTCTTGCAACATTGCTTGTAAACAAATTAAGAGGTACATTCACA
              490       500       510       520       530       540

              550  
b3114  TGTGTAGCTGTT
       :: :: ::::::
b31343 TGCGTTGCTGTT
              550  

</pre>
<hr>
<A name=b20483>
<pre>
>><a onClick="window.open('getRecord.php?id=b20483',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20483" target=_"blank">b20483</a> AJGS01000109 Clostridium thermocellum AD2        (552 nt)
 initn: 1488 init1: 1488 opt: 1500  Z-score: 84.6  bits: 25.5 E(): 1.3e+02
banded Smith-Waterman score: 1500; 74.6% identity (74.6% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b3114  GCTACTCTTCTTGCACAGGCTCTTATCAGAGAAGGTATGAAGAACATCGCAGCAGGTGCT
       :: :: ::::::::::::::: : :::::::::::  : :::::: : ::::: ::::: 
b20483 GCAACACTTCTTGCACAGGCTATAATCAGAGAAGGACTTAAGAACGTTGCAGCCGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b3114  AACCCGATGATCGTCCGCAAGGGTATGGCAAAGGCTGTTGACACAGCTGTTGAAGCTATC
       ::::::::: :  :    :::::::: ::::: ::::::::  : :: ::::::: ::::
b20483 AACCCGATGCTTCTTAAAAAGGGTATAGCAAAAGCTGTTGATGCGGCAGTTGAAGGTATC
               70        80        90       100       110       120

              130       140       150       160       170       180
b3114  AAGGCTAACTCCGTTCAGGTTTCGGGCTCCGATGACATTGCAAGCGTTGCTGCAAACTCT
       ::::  : :  :    :::::   ::    :: :: :: ::::: :::::: :::  :: 
b20483 AAGGAAATCAGCCAGAAGGTTAAAGGAAAAGAAGATATAGCAAGGGTTGCTTCAATTTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b3114  GCTGCTGATGAAAATGTCGGCAAGCTCATTGCAGAAGCTATGGAAAAGGTTACCGCTGAC
       ::   ::: :::  : : ::  :  : :: :: :: ::::::::::: :::::   ::::
b20483 GCCAATGACGAAGTTATTGGTGAATTGATAGCCGATGCTATGGAAAAAGTTACAAATGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b3114  GGTGTTATCACCATTGAAGAATCCAAGACTGCCGAAACATACTCCGAAGTTGTTGAAGGT
       :::::::::::  :::::::: : :::::    :  ::: ::  :::: : :::::::::
b20483 GGTGTTATCACTGTTGAAGAAGCAAAGACAATGGGCACAAACCTCGAAATAGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b3114  ATGCAGTTCGACAGAGGCTACATCACACCTTACATGGTTACTGATACCGATAAGATGGAA
       :::::::: :::::::: ::  :  :::: :::::::::::::: :: :: :::::::::
b20483 ATGCAGTTTGACAGAGGTTATGTATCACCATACATGGTTACTGACACTGAAAAGATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b3114  GCCGTTATTGATGATGCTTACATTCTTATCACAGACAAGAAGATCTCCTCTATCCAGGAA
       :: ::: :::::::  ::::::: :: :: ::::::::::: ::   :  ::::::::: 
b20483 GCTGTTCTTGATGAGCCTTACATCCTCATTACAGACAAGAAAATAAGCAATATCCAGGAC
              370       380       390       400       410       420

              430       440       450       460       470       480
b3114  CTTCTTCCGCTCCTCGAACAGATCGTAAAGTCAGGCAAGAAGCTTGTTATCATTGCAGAA
        :::: ::  : :: :::::::: ::  ::   :::::::: :: ::::::::::: :: 
b20483 ATTCTCCCATTGCTGGAACAGATAGTTCAGCAGGGCAAGAAACTGGTTATCATTGCTGAG
              430       440       450       460       470       480

              490       500       510       520       530       540
b3114  GACATTGAGGGCGAAGCACTTTCCACACTTATCGTAAACAAGCTCAGAGGAACATTCACC
       ::  ::::::::::::: ::: : ::: :  : ::::::::  : ::::: :::::::: 
b20483 GATGTTGAGGGCGAAGCTCTTGCAACATTGCTTGTAAACAAATTAAGAGGTACATTCACA
              490       500       510       520       530       540

              550  
b3114  TGTGTAGCTGTT
       :: :: ::::::
b20483 TGCGTTGCTGTT
              550  

</pre>
<hr>
<A name=b28063>
<pre>
>><a onClick="window.open('getRecord.php?id=b28063',
                                'cpndb_record'); return false;" href="getRecord.php?id=b28063" target=_"blank">b28063</a> NZ_CBQO010000120 Clostridium  thermocellum  BC1  (552 nt)
 initn: 1488 init1: 1488 opt: 1500  Z-score: 84.6  bits: 25.5 E(): 1.3e+02
banded Smith-Waterman score: 1500; 74.6% identity (74.6% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b3114  GCTACTCTTCTTGCACAGGCTCTTATCAGAGAAGGTATGAAGAACATCGCAGCAGGTGCT
       :: :: ::::::::::::::: : :::::::::::  : :::::: : ::::: ::::: 
b28063 GCAACACTTCTTGCACAGGCTATAATCAGAGAAGGACTTAAGAACGTTGCAGCCGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b3114  AACCCGATGATCGTCCGCAAGGGTATGGCAAAGGCTGTTGACACAGCTGTTGAAGCTATC
       ::::::::: :  :    :::::::: ::::: ::::::::  : :: ::::::: ::::
b28063 AACCCGATGCTTCTTAAAAAGGGTATAGCAAAAGCTGTTGATGCGGCAGTTGAAGGTATC
               70        80        90       100       110       120

              130       140       150       160       170       180
b3114  AAGGCTAACTCCGTTCAGGTTTCGGGCTCCGATGACATTGCAAGCGTTGCTGCAAACTCT
       ::::  : :  :    :::::   ::    :: :: :: ::::: :::::: :::  :: 
b28063 AAGGAAATCAGCCAGAAGGTTAAAGGAAAAGAAGATATAGCAAGGGTTGCTTCAATTTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b3114  GCTGCTGATGAAAATGTCGGCAAGCTCATTGCAGAAGCTATGGAAAAGGTTACCGCTGAC
       ::   ::: :::  : : ::  :  : :: :: :: ::::::::::: :::::   ::::
b28063 GCCAATGACGAAGTTATTGGTGAATTGATAGCCGATGCTATGGAAAAAGTTACAAATGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b3114  GGTGTTATCACCATTGAAGAATCCAAGACTGCCGAAACATACTCCGAAGTTGTTGAAGGT
       :::::::::::  :::::::: : :::::    :  ::: ::  :::: : :::::::::
b28063 GGTGTTATCACTGTTGAAGAAGCAAAGACAATGGGCACAAACCTCGAAATAGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b3114  ATGCAGTTCGACAGAGGCTACATCACACCTTACATGGTTACTGATACCGATAAGATGGAA
       :::::::: :::::::: ::  :  :::: :::::::::::::: :: :: :::::::::
b28063 ATGCAGTTTGACAGAGGTTATGTATCACCATACATGGTTACTGACACTGAAAAGATGGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
b3114  GCCGTTATTGATGATGCTTACATTCTTATCACAGACAAGAAGATCTCCTCTATCCAGGAA
       :: ::: :::::::  ::::::: :: :: ::::::::::: ::   :  ::::::::: 
b28063 GCTGTTCTTGATGAGCCTTACATCCTCATTACAGACAAGAAAATAAGCAATATCCAGGAC
              370       380       390       400       410       420

              430       440       450       460       470       480
b3114  CTTCTTCCGCTCCTCGAACAGATCGTAAAGTCAGGCAAGAAGCTTGTTATCATTGCAGAA
        :::: ::  : :: :::::::: ::  ::   :::::::: :: ::::::::::: :: 
b28063 ATTCTCCCATTGCTGGAACAGATAGTTCAGCAGGGCAAGAAACTGGTTATCATTGCTGAG
              430       440       450       460       470       480

              490       500       510       520       530       540
b3114  GACATTGAGGGCGAAGCACTTTCCACACTTATCGTAAACAAGCTCAGAGGAACATTCACC
       ::  ::::::::::::: ::: : ::: :  : ::::::::  : ::::: :::::::: 
b28063 GATGTTGAGGGCGAAGCTCTTGCAACATTGCTTGTAAACAAATTAAGAGGTACATTCACA
              490       500       510       520       530       540

              550  
b3114  TGTGTAGCTGTT
       :: :: ::::::
b28063 TGCGTTGCTGTT
              550  

</pre>
<hr>
<p><pre>


552 residues in 1 query   sequences
10433008 residues in 18820 library sequences
 Scomplib [35.03]
 start: Mon Jul 22 06:37:05 2024 done: Mon Jul 22 06:37:07 2024
 Total Scan time:  2.350 Total Display time:  0.010

Function used was FASTA [version 35.03 Feb. 18, 2008]
</pre>