/var/www/html/cpndb/fasta_results/b3111.fasta# /data/www/cpndb/fasta35 -E 200 -Q -m 6 -b 20 -d 20 -z 2 -H /data/www/cpndb/fasta_results/b3111 /data/www/cpndb/blastDBs/reference_a_nut
<pre>
FASTA searches a protein or DNA sequence data bank
 version 35.03 Feb. 18, 2008
Please cite:
 W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

</pre>
Query: /data/www/cpndb/fasta_results/b3111
<pre>
  1>>>b3111 558 nt - 558 nt
Library: /data/www/cpndb/blastDBs/reference_a_nut 10433008 residues in 18820 sequences

10433008 residues in 18820 sequences
Statistics: MLE_cen statistics: Lambda= 0.0042;  K=3.263e-05 (cen=941)
Algorithm: FASTA (3.5 Sept 2006) [optimized]
Parameters: +5/-4 matrix (5:-4) ktup: 6
 join: 51, opt: 36, open/ext: -12/-4, width:  16
 Scan time:  2.310
</pre>
<p>
<hr>
<p>
<p><pre>

The best scores are:                                      opt bits E(18820)
<a onClick="window.open('getRecord.php?id=b17591',
                                'cpndb_record'); return false;" href="getRecord.php?id=b17591" target=_"blank">b17591</a> AB547632 Prevotella stercorea JCM 13469 ( 558) [f] 1849 26.0      87 <A HREF="#b17591">align</A>
<a onClick="window.open('getRecord.php?id=b20077',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20077" target=_"blank">b20077</a> AFZZ01000171 Prevotella stercorea DSM 1 ( 558) [f] 1849 26.0      87 <A HREF="#b20077">align</A>
<a onClick="window.open('getRecord.php?id=b31342',
                                'cpndb_record'); return false;" href="getRecord.php?id=b31342" target=_"blank">b31342</a> NC_019968 Prevotella dentalis DSM 3688  ( 558) [f] 1836 25.9      92 <A HREF="#b31342">align</A>
<a onClick="window.open('getRecord.php?id=b17623',
                                'cpndb_record'); return false;" href="getRecord.php?id=b17623" target=_"blank">b17623</a> AB547600 Prevotella dentalis JCM 13448  ( 558) [f] 1836 25.9      92 <A HREF="#b17623">align</A>
<a onClick="window.open('getRecord.php?id=b19280',
                                'cpndb_record'); return false;" href="getRecord.php?id=b19280" target=_"blank">b19280</a> AFPW01000041 Prevotella dentalis DSM 36 ( 558) [f] 1836 25.9      92 <A HREF="#b19280">align</A>
<a onClick="window.open('getRecord.php?id=b19570',
                                'cpndb_record'); return false;" href="getRecord.php?id=b19570" target=_"blank">b19570</a> ADCT01000078 Prevotella sp. C561        ( 558) [f] 1786 25.6 1.1e+02 <A HREF="#b19570">align</A>
<a onClick="window.open('getRecord.php?id=b28410',
                                'cpndb_record'); return false;" href="getRecord.php?id=b28410" target=_"blank">b28410</a> JACD01000105 Prevotella  sp.  ICM33     ( 558) [f] 1768 25.5 1.2e+02 <A HREF="#b28410">align</A>
<a onClick="window.open('getRecord.php?id=b30104',
                                'cpndb_record'); return false;" href="getRecord.php?id=b30104" target=_"blank">b30104</a> NZ_FZNZ01000022  Prevotella  jejuni  DS ( 558) [f] 1759 25.5 1.3e+02 <A HREF="#b30104">align</A>
<a onClick="window.open('getRecord.php?id=b16426',
                                'cpndb_record'); return false;" href="getRecord.php?id=b16426" target=_"blank">b16426</a> NZ_GG740022 Prevotella melaninogenica D ( 558) [f] 1759 25.5 1.3e+02 <A HREF="#b16426">align</A>
<a onClick="window.open('getRecord.php?id=b16438',
                                'cpndb_record'); return false;" href="getRecord.php?id=b16438" target=_"blank">b16438</a> GG740022 Prevotella melaninogenica Oral ( 558) [f] 1759 25.5 1.3e+02 <A HREF="#b16438">align</A>
<a onClick="window.open('getRecord.php?id=b14123',
                                'cpndb_record'); return false;" href="getRecord.php?id=b14123" target=_"blank">b14123</a> ACBX01000045 Prevotella copri DSM 18205 ( 558) [f] 1750 25.4 1.3e+02 <A HREF="#b14123">align</A>
<a onClick="window.open('getRecord.php?id=b17625',
                                'cpndb_record'); return false;" href="getRecord.php?id=b17625" target=_"blank">b17625</a> AB547598 Prevotella copri JCM 13464     ( 558) [f] 1750 25.4 1.3e+02 <A HREF="#b17625">align</A>
<a onClick="window.open('getRecord.php?id=b20969',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20969" target=_"blank">b20969</a> ALJQ01000037 Prevotella sp. MSX73       ( 558) [f] 1746 25.4 1.3e+02 <A HREF="#b20969">align</A>
<a onClick="window.open('getRecord.php?id=b17607',
                                'cpndb_record'); return false;" href="getRecord.php?id=b17607" target=_"blank">b17607</a> AB547616 Prevotella melaninogenica JCM  ( 558) [f] 1741 25.3 1.4e+02 <A HREF="#b17607">align</A>
<a onClick="window.open('getRecord.php?id=b33882',
                                'cpndb_record'); return false;" href="getRecord.php?id=b33882" target=_"blank">b33882</a> NZ_QSCI01000025 Prevotella  copri OF03- ( 558) [f] 1741 25.3 1.4e+02 <A HREF="#b33882">align</A>
<a onClick="window.open('getRecord.php?id=b14417',
                                'cpndb_record'); return false;" href="getRecord.php?id=b14417" target=_"blank">b14417</a> CP002122 Prevotella melaninogenica ATCC ( 558) [f] 1741 25.3 1.4e+02 <A HREF="#b14417">align</A>
<a onClick="window.open('getRecord.php?id=b17608',
                                'cpndb_record'); return false;" href="getRecord.php?id=b17608" target=_"blank">b17608</a> AB547615 Prevotella melaninogenica JCM  ( 558) [f] 1741 25.3 1.4e+02 <A HREF="#b17608">align</A>
<a onClick="window.open('getRecord.php?id=b7335',
                                'cpndb_record'); return false;" href="getRecord.php?id=b7335" target=_"blank">b7335</a> AY837570 Prevotella melaninogenica ATCC  ( 558) [f] 1741 25.3 1.4e+02 <A HREF="#b7335">align</A>
<a onClick="window.open('getRecord.php?id=b15898',
                                'cpndb_record'); return false;" href="getRecord.php?id=b15898" target=_"blank">b15898</a> ADEG01000062 Prevotella buccalis ATCC 3 ( 558) [f] 1723 25.2 1.5e+02 <A HREF="#b15898">align</A>
<a onClick="window.open('getRecord.php?id=b6838',
                                'cpndb_record'); return false;" href="getRecord.php?id=b6838" target=_"blank">b6838</a> AY691277 Prevotella buccae ATCC 33574    ( 558) [f] 1719 25.2 1.5e+02 <A HREF="#b6838">align</A>
</pre><p><hr><p>

>>>b3111, 558 nt vs /data/www/cpndb/blastDBs/reference_a_nut library

<A name=b17591>
<pre>
>><a onClick="window.open('getRecord.php?id=b17591',
                                'cpndb_record'); return false;" href="getRecord.php?id=b17591" target=_"blank">b17591</a> AB547632 Prevotella stercorea JCM 13469          (558 nt)
 initn: 1837 init1: 1837 opt: 1849  Z-score: 87.4  bits: 26.0 E():   87
banded Smith-Waterman score: 1849; 81.3% identity (81.3% similar) in 557 nt overlap (1-557:1-557)
<p>

               10        20        30        40        50        60
b3111  GCAACCATCCTCACACAGGCTATCGTTACAAAGGGACTGAGGAACGTCACCGCTGGCGCG
       :: :: :::::::: ::::::::::: ::  ::::  ::: :::::: ::::: :: :: 
b17591 GCTACAATCCTCACTCAGGCTATCGTAACCGAGGGTTTGAAGAACGTAACCGCAGGTGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b3111  AACCCGATGGACTTGAAGCGCGGTATTGACAAGGCTGTGAATGCCGTAGTGGATTACATC
       :::::::::::: ::::::: ::::: :::::::: :::  ::: :: :: :   :::::
b17591 AACCCGATGGACCTGAAGCGTGGTATCGACAAGGCAGTGGCTGCTGTCGTAGCACACATC
               70        80        90       100       110       120

              130       140       150       160       170       180
b3111  AAGGCAAATGCTGAGCTCGTAGGCGACAACTACGACAAGATAGAGCAGGCTGCCACGGTG
       :::::::: :: ::: : :: :::::::::::::::::::: :::::::  :: :: :: 
b17591 AAGGCAAACGCAGAGATTGTTGGCGACAACTACGACAAGATTGAGCAGGTAGCAACCGTT
              130       140       150       160       170       180

              190       200       210       220       230       240
b3111  TCAGCAAATAACGACCCTGAGATTGGTAAGCTCCTTGCTGACGCTATGCGCAAGGTGTCA
       :: :: :: :::::::: ::::::::::::::::: :::::::: :::::::::::::: 
b17591 TCTGCTAACAACGACCCGGAGATTGGTAAGCTCCTGGCTGACGCAATGCGCAAGGTGTCT
              190       200       210       220       230       240

              250       260       270       280       290       300
b3111  AAGGATGGTGTGATAACCATCGAGGAGAGCAAGAGCCGTGACACAAGCATCGGTGTTGTG
       ::::: :: :: :: ::::::::::::::::::::::: ::::::: :::::: ::    
b17591 AAGGACGGCGTAATCACCATCGAGGAGAGCAAGAGCCGCGACACAAACATCGGCGTAACA
              250       260       270       280       290       300

              310       320       330       340       350       360
b3111  GAGGGTATGCAGTTTGACCGTGGATATCTGTCTGGTTACTTCGTGACAGACGCGGAGAAG
       :: ::::::::::::::::: :: ::::::  :: ::::::::: :: ::: : ::::::
b17591 GAAGGTATGCAGTTTGACCGCGGTTATCTGAGTGCTTACTTCGTTACCGACTCTGAGAAG
              310       320       330       340       350       360

              370       380       390       400       410       420
b3111  CTGGAGTGTGTTATGGAGAACCCATATATCCTCATCTACGACAAGAAGATTTCAAACCTC
        ::::::: :::::::: ::::: :: ::::: :::::::::::::::::    : : : 
b17591 ATGGAGTGCGTTATGGACAACCCGTACATCCTTATCTACGACAAGAAGATCAGCAGCGTT
              370       380       390       400       410       420

              430       440       450       460       470       480
b3111  AAGGAGCTTCTTCCTATCCTCCAGCCGGCGGCAGAGAGTGGCCGTGGACTGCTTATCATA
       :::::  : :: :::::::: :::::::: :::::::: :: ::     :::: ::::: 
b17591 AAGGACTTGCTGCCTATCCTGCAGCCGGCTGCAGAGAGCGGACGCCCGATGCTCATCATC
              430       440       450       460       470       480

              490       500       510       520       530       540
b3111  GCAGAGGACGTTGACTATGAAGCACTCACAACACTCGTTGCAAACCGTCTGCGTGGCGGT
       :: :::::::: :::: ::: :::::::: ::::::::::  :::::::::::::  :: 
b17591 GCTGAGGACGTAGACTCTGAGGCACTCACCACACTCGTTGTGAACCGTCTGCGTGCAGGC
              490       500       510       520       530       540

              550        
b3111  CTGAAGATATGCGCTGTC
        ::::::: :::::::: 
b17591 TTGAAGATCTGCGCTGTG
              550        

</pre>
<hr>
<A name=b20077>
<pre>
>><a onClick="window.open('getRecord.php?id=b20077',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20077" target=_"blank">b20077</a> AFZZ01000171 Prevotella stercorea DSM 18206      (558 nt)
 initn: 1837 init1: 1837 opt: 1849  Z-score: 87.4  bits: 26.0 E():   87
banded Smith-Waterman score: 1849; 81.3% identity (81.3% similar) in 557 nt overlap (1-557:1-557)
<p>

               10        20        30        40        50        60
b3111  GCAACCATCCTCACACAGGCTATCGTTACAAAGGGACTGAGGAACGTCACCGCTGGCGCG
       :: :: :::::::: ::::::::::: ::  ::::  ::: :::::: ::::: :: :: 
b20077 GCTACAATCCTCACTCAGGCTATCGTAACCGAGGGTTTGAAGAACGTAACCGCAGGTGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b3111  AACCCGATGGACTTGAAGCGCGGTATTGACAAGGCTGTGAATGCCGTAGTGGATTACATC
       :::::::::::: ::::::: ::::: :::::::: :::  ::: :: :: :   :::::
b20077 AACCCGATGGACCTGAAGCGTGGTATCGACAAGGCAGTGGCTGCTGTCGTAGCACACATC
               70        80        90       100       110       120

              130       140       150       160       170       180
b3111  AAGGCAAATGCTGAGCTCGTAGGCGACAACTACGACAAGATAGAGCAGGCTGCCACGGTG
       :::::::: :: ::: : :: :::::::::::::::::::: :::::::  :: :: :: 
b20077 AAGGCAAACGCAGAGATTGTTGGCGACAACTACGACAAGATTGAGCAGGTAGCAACCGTT
              130       140       150       160       170       180

              190       200       210       220       230       240
b3111  TCAGCAAATAACGACCCTGAGATTGGTAAGCTCCTTGCTGACGCTATGCGCAAGGTGTCA
       :: :: :: :::::::: ::::::::::::::::: :::::::: :::::::::::::: 
b20077 TCTGCTAACAACGACCCGGAGATTGGTAAGCTCCTGGCTGACGCAATGCGCAAGGTGTCT
              190       200       210       220       230       240

              250       260       270       280       290       300
b3111  AAGGATGGTGTGATAACCATCGAGGAGAGCAAGAGCCGTGACACAAGCATCGGTGTTGTG
       ::::: :: :: :: ::::::::::::::::::::::: ::::::: :::::: ::    
b20077 AAGGACGGCGTAATCACCATCGAGGAGAGCAAGAGCCGCGACACAAACATCGGCGTAACA
              250       260       270       280       290       300

              310       320       330       340       350       360
b3111  GAGGGTATGCAGTTTGACCGTGGATATCTGTCTGGTTACTTCGTGACAGACGCGGAGAAG
       :: ::::::::::::::::: :: ::::::  :: ::::::::: :: ::: : ::::::
b20077 GAAGGTATGCAGTTTGACCGCGGTTATCTGAGTGCTTACTTCGTTACCGACTCTGAGAAG
              310       320       330       340       350       360

              370       380       390       400       410       420
b3111  CTGGAGTGTGTTATGGAGAACCCATATATCCTCATCTACGACAAGAAGATTTCAAACCTC
        ::::::: :::::::: ::::: :: ::::: :::::::::::::::::    : : : 
b20077 ATGGAGTGCGTTATGGACAACCCGTACATCCTTATCTACGACAAGAAGATCAGCAGCGTT
              370       380       390       400       410       420

              430       440       450       460       470       480
b3111  AAGGAGCTTCTTCCTATCCTCCAGCCGGCGGCAGAGAGTGGCCGTGGACTGCTTATCATA
       :::::  : :: :::::::: :::::::: :::::::: :: ::     :::: ::::: 
b20077 AAGGACTTGCTGCCTATCCTGCAGCCGGCTGCAGAGAGCGGACGCCCGATGCTCATCATC
              430       440       450       460       470       480

              490       500       510       520       530       540
b3111  GCAGAGGACGTTGACTATGAAGCACTCACAACACTCGTTGCAAACCGTCTGCGTGGCGGT
       :: :::::::: :::: ::: :::::::: ::::::::::  :::::::::::::  :: 
b20077 GCTGAGGACGTAGACTCTGAGGCACTCACCACACTCGTTGTGAACCGTCTGCGTGCAGGC
              490       500       510       520       530       540

              550        
b3111  CTGAAGATATGCGCTGTC
        ::::::: :::::::: 
b20077 TTGAAGATCTGCGCTGTG
              550        

</pre>
<hr>
<A name=b31342>
<pre>
>><a onClick="window.open('getRecord.php?id=b31342',
                                'cpndb_record'); return false;" href="getRecord.php?id=b31342" target=_"blank">b31342</a> NC_019968 Prevotella dentalis DSM 3688           (558 nt)
 initn: 1775 init1: 1775 opt: 1836  Z-score: 86.9  bits: 25.9 E():   92
banded Smith-Waterman score: 1836; 81.0% identity (81.0% similar) in 558 nt overlap (1-558:1-558)
<p>

               10        20        30        40        50        60
b3111  GCAACCATCCTCACACAGGCTATCGTTACAAAGGGACTGAGGAACGTCACCGCTGGCGCG
       :: ::::: ::  ::::::: ::::: :   :::: :::: :::::: :: :: ::::: 
b31342 GCCACCATACTGGCACAGGCCATCGTCAACGAGGGCCTGAAGAACGTAACGGCCGGCGCC
               10        20        30        40        50        60

               70        80        90       100       110       120
b3111  AACCCGATGGACTTGAAGCGCGGTATTGACAAGGCTGTGAATGCCGTAGTGGATTACATC
       ::::: :::::: : :::::::: :: :::::::: :::     ::: ::::::: ::::
b31342 AACCCCATGGACCTCAAGCGCGGCATCGACAAGGCCGTGGCCAACGTGGTGGATTTCATC
               70        80        90       100       110       120

              130       140       150       160       170       180
b3111  AAGGCAAATGCTGAGCTCGTAGGCGACAACTACGACAAGATAGAGCAGGCTGCCACGGTG
       :::   ::::: :::::::: :::::::::::::::::::: :::::::  ::::: :: 
b31342 AAGAACAATGCCGAGCTCGTGGGCGACAACTACGACAAGATTGAGCAGGTGGCCACCGTT
              130       140       150       160       170       180

              190       200       210       220       230       240
b3111  TCAGCAAATAACGACCCTGAGATTGGTAAGCTCCTTGCTGACGCTATGCGCAAGGTGTCA
       :: :: :: :::::::: :::::::: ::::: :: :: ::::: :::::::::::::: 
b31342 TCGGCCAACAACGACCCCGAGATTGGCAAGCTGCTGGCCGACGCCATGCGCAAGGTGTCG
              190       200       210       220       230       240

              250       260       270       280       290       300
b3111  AAGGATGGTGTGATAACCATCGAGGAGAGCAAGAGCCGTGACACAAGCATCGGTGTTGTG
       :: ::::: ::::: ::::::::::::::::::: ::: ::::: :::::::: :: :::
b31342 AAAGATGGAGTGATTACCATCGAGGAGAGCAAGACCCGCGACACCAGCATCGGCGTGGTG
              250       260       270       280       290       300

              310       320       330       340       350       360
b3111  GAGGGTATGCAGTTTGACCGTGGATATCTGTCTGGTTACTTCGTGACAGACGCGGAGAAG
       ::::: :::::::: ::::: :: :: :: :: :::::::::::::: ::::: :: :::
b31342 GAGGGCATGCAGTTCGACCGCGGTTACCTCTCGGGTTACTTCGTGACCGACGCCGACAAG
              310       320       330       340       350       360

              370       380       390       400       410       420
b3111  CTGGAGTGTGTTATGGAGAACCCATATATCCTCATCTACGACAAGAAGATTTCAAACCTC
        ::::::: :: ::::: :: :: ::::::::::::::::::::::::::::::::::::
b31342 ATGGAGTGCGTGATGGAAAATCCCTATATCCTCATCTACGACAAGAAGATTTCAAACCTC
              370       380       390       400       410       420

              430       440       450       460       470       480
b3111  AAGGAGCTTCTTCCTATCCTCCAGCCGGCGGCAGAGAGTGGCCGTGGACTGCTTATCATA
       :::::: : :: :: ::::: ::::: :: :: ::::: ::::::   ::  :  : :: 
b31342 AAGGAGTTCCTCCCCATCCTGCAGCCTGCCGCTGAGAGCGGCCGTCCGCTCATGGTGATT
              430       440       450       460       470       480

              490       500       510       520       530       540
b3111  GCAGAGGACGTTGACTATGAAGCACTCACAACACTCGTTGCAAACCGTCTGCGTGGCGGT
       :: ::::: :: :::: ::: :: ::::: :: ::::: :  ::::::::::: ::::: 
b31342 GCCGAGGATGTGGACTCTGAGGCCCTCACTACGCTCGTGGTGAACCGTCTGCGCGGCGGC
              490       500       510       520       530       540

              550        
b3111  CTGAAGATATGCGCTGTC
        ::::::: ::::: :::
b31342 TTGAAGATCTGCGCCGTC
              550        

</pre>
<hr>
<A name=b17623>
<pre>
>><a onClick="window.open('getRecord.php?id=b17623',
                                'cpndb_record'); return false;" href="getRecord.php?id=b17623" target=_"blank">b17623</a> AB547600 Prevotella dentalis JCM 13448           (558 nt)
 initn: 1775 init1: 1775 opt: 1836  Z-score: 86.9  bits: 25.9 E():   92
banded Smith-Waterman score: 1836; 81.0% identity (81.0% similar) in 558 nt overlap (1-558:1-558)
<p>

               10        20        30        40        50        60
b3111  GCAACCATCCTCACACAGGCTATCGTTACAAAGGGACTGAGGAACGTCACCGCTGGCGCG
       :: ::::: ::  ::::::: ::::: :   :::: :::: :::::: :: :: ::::: 
b17623 GCCACCATACTGGCACAGGCCATCGTCAACGAGGGCCTGAAGAACGTAACGGCCGGCGCC
               10        20        30        40        50        60

               70        80        90       100       110       120
b3111  AACCCGATGGACTTGAAGCGCGGTATTGACAAGGCTGTGAATGCCGTAGTGGATTACATC
       ::::: :::::: : :::::::: :: :::::::: :::     ::: ::::::: ::::
b17623 AACCCCATGGACCTCAAGCGCGGCATCGACAAGGCCGTGGCCAACGTGGTGGATTTCATC
               70        80        90       100       110       120

              130       140       150       160       170       180
b3111  AAGGCAAATGCTGAGCTCGTAGGCGACAACTACGACAAGATAGAGCAGGCTGCCACGGTG
       :::   ::::: :::::::: :::::::::::::::::::: :::::::  ::::: :: 
b17623 AAGAACAATGCCGAGCTCGTGGGCGACAACTACGACAAGATTGAGCAGGTGGCCACCGTT
              130       140       150       160       170       180

              190       200       210       220       230       240
b3111  TCAGCAAATAACGACCCTGAGATTGGTAAGCTCCTTGCTGACGCTATGCGCAAGGTGTCA
       :: :: :: :::::::: :::::::: ::::: :: :: ::::: :::::::::::::: 
b17623 TCGGCCAACAACGACCCCGAGATTGGCAAGCTGCTGGCCGACGCCATGCGCAAGGTGTCG
              190       200       210       220       230       240

              250       260       270       280       290       300
b3111  AAGGATGGTGTGATAACCATCGAGGAGAGCAAGAGCCGTGACACAAGCATCGGTGTTGTG
       :: ::::: ::::: ::::::::::::::::::: ::: ::::: :::::::: :: :::
b17623 AAAGATGGAGTGATTACCATCGAGGAGAGCAAGACCCGCGACACCAGCATCGGCGTGGTG
              250       260       270       280       290       300

              310       320       330       340       350       360
b3111  GAGGGTATGCAGTTTGACCGTGGATATCTGTCTGGTTACTTCGTGACAGACGCGGAGAAG
       ::::: :::::::: ::::: :: :: :: :: :::::::::::::: ::::: :: :::
b17623 GAGGGCATGCAGTTCGACCGCGGTTACCTCTCGGGTTACTTCGTGACCGACGCCGACAAG
              310       320       330       340       350       360

              370       380       390       400       410       420
b3111  CTGGAGTGTGTTATGGAGAACCCATATATCCTCATCTACGACAAGAAGATTTCAAACCTC
        ::::::: :: ::::: :: :: ::::::::::::::::::::::::::::::::::::
b17623 ATGGAGTGCGTGATGGAAAATCCCTATATCCTCATCTACGACAAGAAGATTTCAAACCTC
              370       380       390       400       410       420

              430       440       450       460       470       480
b3111  AAGGAGCTTCTTCCTATCCTCCAGCCGGCGGCAGAGAGTGGCCGTGGACTGCTTATCATA
       :::::: : :: :: ::::: ::::: :: :: ::::: ::::::   ::  :  : :: 
b17623 AAGGAGTTCCTCCCCATCCTGCAGCCTGCCGCTGAGAGCGGCCGTCCGCTCATGGTGATT
              430       440       450       460       470       480

              490       500       510       520       530       540
b3111  GCAGAGGACGTTGACTATGAAGCACTCACAACACTCGTTGCAAACCGTCTGCGTGGCGGT
       :: ::::: :: :::: ::: :: ::::: :: ::::: :  ::::::::::: ::::: 
b17623 GCCGAGGATGTGGACTCTGAGGCCCTCACTACGCTCGTGGTGAACCGTCTGCGCGGCGGC
              490       500       510       520       530       540

              550        
b3111  CTGAAGATATGCGCTGTC
        ::::::: ::::: :::
b17623 TTGAAGATCTGCGCCGTC
              550        

</pre>
<hr>
<A name=b19280>
<pre>
>><a onClick="window.open('getRecord.php?id=b19280',
                                'cpndb_record'); return false;" href="getRecord.php?id=b19280" target=_"blank">b19280</a> AFPW01000041 Prevotella dentalis DSM 3688        (558 nt)
 initn: 1775 init1: 1775 opt: 1836  Z-score: 86.9  bits: 25.9 E():   92
banded Smith-Waterman score: 1836; 81.0% identity (81.0% similar) in 558 nt overlap (1-558:1-558)
<p>

               10        20        30        40        50        60
b3111  GCAACCATCCTCACACAGGCTATCGTTACAAAGGGACTGAGGAACGTCACCGCTGGCGCG
       :: ::::: ::  ::::::: ::::: :   :::: :::: :::::: :: :: ::::: 
b19280 GCCACCATACTGGCACAGGCCATCGTCAACGAGGGCCTGAAGAACGTAACGGCCGGCGCC
               10        20        30        40        50        60

               70        80        90       100       110       120
b3111  AACCCGATGGACTTGAAGCGCGGTATTGACAAGGCTGTGAATGCCGTAGTGGATTACATC
       ::::: :::::: : :::::::: :: :::::::: :::     ::: ::::::: ::::
b19280 AACCCCATGGACCTCAAGCGCGGCATCGACAAGGCCGTGGCCAACGTGGTGGATTTCATC
               70        80        90       100       110       120

              130       140       150       160       170       180
b3111  AAGGCAAATGCTGAGCTCGTAGGCGACAACTACGACAAGATAGAGCAGGCTGCCACGGTG
       :::   ::::: :::::::: :::::::::::::::::::: :::::::  ::::: :: 
b19280 AAGAACAATGCCGAGCTCGTGGGCGACAACTACGACAAGATTGAGCAGGTGGCCACCGTT
              130       140       150       160       170       180

              190       200       210       220       230       240
b3111  TCAGCAAATAACGACCCTGAGATTGGTAAGCTCCTTGCTGACGCTATGCGCAAGGTGTCA
       :: :: :: :::::::: :::::::: ::::: :: :: ::::: :::::::::::::: 
b19280 TCGGCCAACAACGACCCCGAGATTGGCAAGCTGCTGGCCGACGCCATGCGCAAGGTGTCG
              190       200       210       220       230       240

              250       260       270       280       290       300
b3111  AAGGATGGTGTGATAACCATCGAGGAGAGCAAGAGCCGTGACACAAGCATCGGTGTTGTG
       :: ::::: ::::: ::::::::::::::::::: ::: ::::: :::::::: :: :::
b19280 AAAGATGGAGTGATTACCATCGAGGAGAGCAAGACCCGCGACACCAGCATCGGCGTGGTG
              250       260       270       280       290       300

              310       320       330       340       350       360
b3111  GAGGGTATGCAGTTTGACCGTGGATATCTGTCTGGTTACTTCGTGACAGACGCGGAGAAG
       ::::: :::::::: ::::: :: :: :: :: :::::::::::::: ::::: :: :::
b19280 GAGGGCATGCAGTTCGACCGCGGTTACCTCTCGGGTTACTTCGTGACCGACGCCGACAAG
              310       320       330       340       350       360

              370       380       390       400       410       420
b3111  CTGGAGTGTGTTATGGAGAACCCATATATCCTCATCTACGACAAGAAGATTTCAAACCTC
        ::::::: :: ::::: :: :: ::::::::::::::::::::::::::::::::::::
b19280 ATGGAGTGCGTGATGGAAAATCCCTATATCCTCATCTACGACAAGAAGATTTCAAACCTC
              370       380       390       400       410       420

              430       440       450       460       470       480
b3111  AAGGAGCTTCTTCCTATCCTCCAGCCGGCGGCAGAGAGTGGCCGTGGACTGCTTATCATA
       :::::: : :: :: ::::: ::::: :: :: ::::: ::::::   ::  :  : :: 
b19280 AAGGAGTTCCTCCCCATCCTGCAGCCTGCCGCTGAGAGCGGCCGTCCGCTCATGGTGATT
              430       440       450       460       470       480

              490       500       510       520       530       540
b3111  GCAGAGGACGTTGACTATGAAGCACTCACAACACTCGTTGCAAACCGTCTGCGTGGCGGT
       :: ::::: :: :::: ::: :: ::::: :: ::::: :  ::::::::::: ::::: 
b19280 GCCGAGGATGTGGACTCTGAGGCCCTCACTACGCTCGTGGTGAACCGTCTGCGCGGCGGC
              490       500       510       520       530       540

              550        
b3111  CTGAAGATATGCGCTGTC
        ::::::: ::::: :::
b19280 TTGAAGATCTGCGCCGTC
              550        

</pre>
<hr>
<A name=b19570>
<pre>
>><a onClick="window.open('getRecord.php?id=b19570',
                                'cpndb_record'); return false;" href="getRecord.php?id=b19570" target=_"blank">b19570</a> ADCT01000078 Prevotella sp. C561                 (558 nt)
 initn: 1738 init1: 1738 opt: 1786  Z-score: 85.3  bits: 25.6 E(): 1.1e+02
banded Smith-Waterman score: 1786; 80.1% identity (80.1% similar) in 557 nt overlap (1-557:1-557)
<p>

               10        20        30        40        50        60
b3111  GCAACCATCCTCACACAGGCTATCGTTACAAAGGGACTGAGGAACGTCACCGCTGGCGCG
       ::::: :::::::::::::: ::::::::  : ::: ::: ::: :: :: :: :: :: 
b19570 GCAACAATCCTCACACAGGCAATCGTTACTGAAGGATTGAAGAATGTTACAGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b3111  AACCCGATGGACTTGAAGCGCGGTATTGACAAGGCTGTGAATGCCGTAGTGGATTACATC
       :: :: :::::: : ::::: ::::: :::::::::::   :   :: :: ::: : :: 
b19570 AATCCAATGGACCTTAAGCGTGGTATCGACAAGGCTGTAGCTAAGGTTGTTGATCATATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b3111  AAGGCAAATGCTGAGCTCGTAGGCGACAACTACGACAAGATAGAGCAGGCTGCCACGGTG
       :::::   ::: ::: : :: :: :::::::: :::::::: :::::::  :: :: :: 
b19570 AAGGCTTCTGCAGAGGTAGTTGGTGACAACTATGACAAGATTGAGCAGGTAGCTACTGTA
              130       140       150       160       170       180

              190       200       210       220       230       240
b3111  TCAGCAAATAACGACCCTGAGATTGGTAAGCTCCTTGCTGACGCTATGCGCAAGGTGTCA
          :: :: ::::::::::: ::::::::: : ::::: :: :::::::: ::::: :: 
b19570 AGTGCTAACAACGACCCTGAAATTGGTAAGTTGCTTGCAGATGCTATGCGTAAGGTATCT
              190       200       210       220       230       240

              250       260       270       280       290       300
b3111  AAGGATGGTGTGATAACCATCGAGGAGAGCAAGAGCCGTGACACAAGCATCGGTGTTGTG
       ::::::::::: :: :: ::::: :::::::::: :::::: ::::: ::::: ::::: 
b19570 AAGGATGGTGTTATCACTATCGAAGAGAGCAAGACCCGTGAGACAAGTATCGGCGTTGTT
              250       260       270       280       290       300

              310       320       330       340       350       360
b3111  GAGGGTATGCAGTTTGACCGTGGATATCTGTCTGGTTACTTCGTGACAGACGCGGAGAAG
       :::::::::::::: :: ::::: ::::: :::::::::::::: :::::  : :: :::
b19570 GAGGGTATGCAGTTCGATCGTGGCTATCTCTCTGGTTACTTCGTAACAGATACAGACAAG
              310       320       330       340       350       360

              370       380       390       400       410       420
b3111  CTGGAGTGTGTTATGGAGAACCCATATATCCTCATCTACGACAAGAAGATTTCAAACCTC
        ::::::::: ::::::::::::::: :::::::::::::::::::::::::::::: : 
b19570 ATGGAGTGTGATATGGAGAACCCATACATCCTCATCTACGACAAGAAGATTTCAAACGTT
              370       380       390       400       410       420

              430       440       450       460       470       480
b3111  AAGGAGCTTCTTCCTATCCTCCAGCCGGCGGCAGAGAGTGGCCGTGGACTGCTTATCATA
       :::::  : ::::: ::::::::::: :: ::::: ::::: :::  : :: :  :::: 
b19570 AAGGACTTCCTTCCAATCCTCCAGCCAGCTGCAGAAAGTGGTCGTCCATTGTTGGTCATT
              430       440       450       460       470       480

              490       500       510       520       530       540
b3111  GCAGAGGACGTTGACTATGAAGCACTCACAACACTCGTTGCAAACCGTCTGCGTGGCGGT
       :::::::: :::::::  :: ::: : :::::: : :::: ::::::::::::::  :: 
b19570 GCAGAGGATGTTGACTCAGAGGCATTGACAACATTGGTTGTAAACCGTCTGCGTGCAGGC
              490       500       510       520       530       540

              550        
b3111  CTGAAGATATGCGCTGTC
        ::::::: :: ::::: 
b19570 TTGAAGATTTGTGCTGTT
              550        

</pre>
<hr>
<A name=b28410>
<pre>
>><a onClick="window.open('getRecord.php?id=b28410',
                                'cpndb_record'); return false;" href="getRecord.php?id=b28410" target=_"blank">b28410</a> JACD01000105 Prevotella  sp.  ICM33              (558 nt)
 initn: 1729 init1: 1729 opt: 1768  Z-score: 84.7  bits: 25.5 E(): 1.2e+02
banded Smith-Waterman score: 1768; 79.7% identity (79.7% similar) in 557 nt overlap (1-557:1-557)
<p>

               10        20        30        40        50        60
b3111  GCAACCATCCTCACACAGGCTATCGTTACAAAGGGACTGAGGAACGTCACCGCTGGCGCG
       :: :: :::::::::::::: :: :::::  : ::: ::: ::: :: :: :: :: :: 
b28410 GCTACTATCCTCACACAGGCAATTGTTACTGAAGGATTGAAGAATGTTACAGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b3111  AACCCGATGGACTTGAAGCGCGGTATTGACAAGGCTGTGAATGCCGTAGTGGATTACATC
       ::::: :::::: : ::::: ::::: :::::::::::   :   :: :: ::: : :: 
b28410 AACCCAATGGACCTTAAGCGTGGTATCGACAAGGCTGTAGCTAAGGTTGTTGATCATATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b3111  AAGGCAAATGCTGAGCTCGTAGGCGACAACTACGACAAGATAGAGCAGGCTGCCACGGTG
       :::::   ::: ::: : :: :: :::::::: ::::::::::::::::  :: :: :: 
b28410 AAGGCTTCTGCAGAGGTAGTTGGTGACAACTATGACAAGATAGAGCAGGTAGCTACTGTA
              130       140       150       160       170       180

              190       200       210       220       230       240
b3111  TCAGCAAATAACGACCCTGAGATTGGTAAGCTCCTTGCTGACGCTATGCGCAAGGTGTCA
          :: :: ::::::::::: :: :::::: : :: :: :: :::::::: :::::::: 
b28410 AGTGCTAACAACGACCCTGAAATAGGTAAGTTGCTCGCAGATGCTATGCGTAAGGTGTCT
              190       200       210       220       230       240

              250       260       270       280       290       300
b3111  AAGGATGGTGTGATAACCATCGAGGAGAGCAAGAGCCGTGACACAAGCATCGGTGTTGTG
       ::::::::::: :: :: ::::: ::::::::::  ::::: ::::: ::::::::::: 
b28410 AAGGATGGTGTTATCACTATCGAAGAGAGCAAGACTCGTGAGACAAGTATCGGTGTTGTT
              250       260       270       280       290       300

              310       320       330       340       350       360
b3111  GAGGGTATGCAGTTTGACCGTGGATATCTGTCTGGTTACTTCGTGACAGACGCGGAGAAG
       :::::::::::::: :: ::::: :: :: :::::::::::::: :::::  : :: :::
b28410 GAGGGTATGCAGTTCGATCGTGGTTACCTCTCTGGTTACTTCGTAACAGATACAGATAAG
              310       320       330       340       350       360

              370       380       390       400       410       420
b3111  CTGGAGTGTGTTATGGAGAACCCATATATCCTCATCTACGACAAGAAGATTTCAAACCTC
        ::::::::: :::::::::::::::::::::::::::::: ::::::::::::::  : 
b28410 ATGGAGTGTGATATGGAGAACCCATATATCCTCATCTACGATAAGAAGATTTCAAATGTT
              370       380       390       400       410       420

              430       440       450       460       470       480
b3111  AAGGAGCTTCTTCCTATCCTCCAGCCGGCGGCAGAGAGTGGCCGTGGACTGCTTATCATA
       :::::  ::::::: :: :::::::: :: ::::::::::: :::  : :: :  :::: 
b28410 AAGGACTTTCTTCCAATTCTCCAGCCAGCTGCAGAGAGTGGTCGTCCATTGTTGGTCATT
              430       440       450       460       470       480

              490       500       510       520       530       540
b3111  GCAGAGGACGTTGACTATGAAGCACTCACAACACTCGTTGCAAACCGTCTGCGTGGCGGT
       :::::::: :::::::  :: ::: : :::::: : :::: ::::::::: ::::  :::
b28410 GCAGAGGATGTTGACTCAGAGGCATTGACAACATTGGTTGTAAACCGTCTTCGTGCAGGT
              490       500       510       520       530       540

              550        
b3111  CTGAAGATATGCGCTGTC
        ::::::: :: ::::: 
b28410 TTGAAGATTTGTGCTGTT
              550        

</pre>
<hr>
<A name=b30104>
<pre>
>><a onClick="window.open('getRecord.php?id=b30104',
                                'cpndb_record'); return false;" href="getRecord.php?id=b30104" target=_"blank">b30104</a> NZ_FZNZ01000022  Prevotella  jejuni  DSM 26989   (558 nt)
 initn: 1663 init1: 1663 opt: 1759  Z-score: 84.4  bits: 25.5 E(): 1.3e+02
banded Smith-Waterman score: 1759; 79.5% identity (79.5% similar) in 557 nt overlap (1-557:1-557)
<p>

               10        20        30        40        50        60
b3111  GCAACCATCCTCACACAGGCTATCGTTACAAAGGGACTGAGGAACGTCACCGCTGGCGCG
       ::::: ::::: :: ::::: ::::::::  : ::: ::: :::::: :: :: :: :: 
b30104 GCAACTATCCTTACCCAGGCAATCGTTACTGAAGGATTGAAGAACGTTACAGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b3111  AACCCGATGGACTTGAAGCGCGGTATTGACAAGGCTGTGAATGCCGTAGTGGATTACATC
       ::::: :::::: : :: :: :::::::: ::::: ::   :   :: :: ::  : :::
b30104 AACCCAATGGACCTCAAACGTGGTATTGATAAGGCCGTTGCTAAGGTGGTTGACCATATC
               70        80        90       100       110       120

              130       140       150       160       170       180
b3111  AAGGCAAATGCTGAGCTCGTAGGCGACAACTACGACAAGATAGAGCAGGCTGCCACGGTG
       :::::::  :: ::: :::: :: :::::::: ::::::::::::::::  :: :: :: 
b30104 AAGGCAACAGCAGAGGTCGTTGGTGACAACTATGACAAGATAGAGCAGGTAGCTACTGTA
              130       140       150       160       170       180

              190       200       210       220       230       240
b3111  TCAGCAAATAACGACCCTGAGATTGGTAAGCTCCTTGCTGACGCTATGCGCAAGGTGTCA
          :: :: :::::::: :: ::::::::: : ::::: :: :: ::::: :::::::: 
b30104 AGTGCTAACAACGACCCAGAAATTGGTAAGTTGCTTGCAGATGCAATGCGTAAGGTGTCT
              190       200       210       220       230       240

              250       260       270       280       290       300
b3111  AAGGATGGTGTGATAACCATCGAGGAGAGCAAGAGCCGTGACACAAGCATCGGTGTTGTG
       ::::::::::: :: :: ::::: :::::::::: :::::: ::::::::::: ::::: 
b30104 AAGGATGGTGTTATCACTATCGAAGAGAGCAAGACCCGTGAGACAAGCATCGGCGTTGTT
              250       260       270       280       290       300

              310       320       330       340       350       360
b3111  GAGGGTATGCAGTTTGACCGTGGATATCTGTCTGGTTACTTCGTGACAGACGCGGAGAAG
       :::::::::::::: :: ::::: :: :: :::::::::::::: :::::  : :: :::
b30104 GAGGGTATGCAGTTCGATCGTGGTTACCTCTCTGGTTACTTCGTAACAGATACAGACAAG
              310       320       330       340       350       360

              370       380       390       400       410       420
b3111  CTGGAGTGTGTTATGGAGAACCCATATATCCTCATCTACGACAAGAAGATTTCAAACCTC
        ::::::::: ::::::::::::::: :::::::::::::: ::::::::::::::: : 
b30104 ATGGAGTGTGATATGGAGAACCCATACATCCTCATCTACGATAAGAAGATTTCAAACGTT
              370       380       390       400       410       420

              430       440       450       460       470       480
b3111  AAGGAGCTTCTTCCTATCCTCCAGCCGGCGGCAGAGAGTGGCCGTGGACTGCTTATCATA
       :::::  : ::::: :: :::::::: :: ::::::::::: :::  : :: :  : :: 
b30104 AAGGACTTCCTTCCAATTCTCCAGCCAGCTGCAGAGAGTGGTCGTCCATTGTTGGTAATT
              430       440       450       460       470       480

              490       500       510       520       530       540
b3111  GCAGAGGACGTTGACTATGAAGCACTCACAACACTCGTTGCAAACCGTCTGCGTGGCGGT
       :::::::: :::::::  :: ::: : :::::: : :: : ::::::::: ::::  :::
b30104 GCAGAGGATGTTGACTCAGAGGCATTGACAACATTGGTAGTAAACCGTCTTCGTGCAGGT
              490       500       510       520       530       540

              550        
b3111  CTGAAGATATGCGCTGTC
        ::::::: :: ::::: 
b30104 TTGAAGATTTGTGCTGTT
              550        

</pre>
<hr>
<A name=b16426>
<pre>
>><a onClick="window.open('getRecord.php?id=b16426',
                                'cpndb_record'); return false;" href="getRecord.php?id=b16426" target=_"blank">b16426</a> NZ_GG740022 Prevotella melaninogenica D18        (558 nt)
 initn: 1720 init1: 1720 opt: 1759  Z-score: 84.4  bits: 25.5 E(): 1.3e+02
banded Smith-Waterman score: 1759; 79.5% identity (79.5% similar) in 557 nt overlap (1-557:1-557)
<p>

               10        20        30        40        50        60
b3111  GCAACCATCCTCACACAGGCTATCGTTACAAAGGGACTGAGGAACGTCACCGCTGGCGCG
       :: :: :::::::::::::: :: :::::  : ::: ::: ::: :: :: :: :: :: 
b16426 GCTACTATCCTCACACAGGCAATTGTTACTGAAGGATTGAAGAATGTTACAGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b3111  AACCCGATGGACTTGAAGCGCGGTATTGACAAGGCTGTGAATGCCGTAGTGGATTACATC
       ::::: :::::: : ::::: ::::: :::::::::::   :   :: :: ::: : :: 
b16426 AACCCAATGGACCTTAAGCGTGGTATCGACAAGGCTGTAGCTAAGGTTGTTGATCATATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b3111  AAGGCAAATGCTGAGCTCGTAGGCGACAACTACGACAAGATAGAGCAGGCTGCCACGGTG
       :::::   ::: ::: : :: :: :::::::: ::::::::::::::::  :: :: :: 
b16426 AAGGCTTCTGCAGAGGTAGTTGGTGACAACTATGACAAGATAGAGCAGGTAGCTACTGTA
              130       140       150       160       170       180

              190       200       210       220       230       240
b3111  TCAGCAAATAACGACCCTGAGATTGGTAAGCTCCTTGCTGACGCTATGCGCAAGGTGTCA
          :: :: ::::::::::: :: :::::: : :: :: :: :::::::: :::::::: 
b16426 AGTGCTAACAACGACCCTGAAATAGGTAAGTTGCTCGCAGATGCTATGCGTAAGGTGTCT
              190       200       210       220       230       240

              250       260       270       280       290       300
b3111  AAGGATGGTGTGATAACCATCGAGGAGAGCAAGAGCCGTGACACAAGCATCGGTGTTGTG
       ::::::::::: :: :: ::::: ::::::::::  ::::: ::::: ::::::::::: 
b16426 AAGGATGGTGTTATCACTATCGAAGAGAGCAAGACTCGTGAGACAAGTATCGGTGTTGTT
              250       260       270       280       290       300

              310       320       330       340       350       360
b3111  GAGGGTATGCAGTTTGACCGTGGATATCTGTCTGGTTACTTCGTGACAGACGCGGAGAAG
       ::::::::::::::::: ::::: :: :: :::::::::::::: :::::  : :: :::
b16426 GAGGGTATGCAGTTTGATCGTGGTTACCTCTCTGGTTACTTCGTAACAGATACAGATAAG
              310       320       330       340       350       360

              370       380       390       400       410       420
b3111  CTGGAGTGTGTTATGGAGAACCCATATATCCTCATCTACGACAAGAAGATTTCAAACCTC
        ::::::::: ::::::::::::::::::::::::::: :: ::::::::::::::: : 
b16426 ATGGAGTGTGATATGGAGAACCCATATATCCTCATCTATGATAAGAAGATTTCAAACGTT
              370       380       390       400       410       420

              430       440       450       460       470       480
b3111  AAGGAGCTTCTTCCTATCCTCCAGCCGGCGGCAGAGAGTGGCCGTGGACTGCTTATCATA
       :::::  : ::::: :: :::::::: :: :: :::::::: :::  : :: :  :::: 
b16426 AAGGACTTCCTTCCAATTCTCCAGCCAGCTGCTGAGAGTGGTCGTCCATTGTTGGTCATT
              430       440       450       460       470       480

              490       500       510       520       530       540
b3111  GCAGAGGACGTTGACTATGAAGCACTCACAACACTCGTTGCAAACCGTCTGCGTGGCGGT
       :::::::: :::::::  :: ::: : :::::: : :::: ::::::::: ::::  :::
b16426 GCAGAGGATGTTGACTCAGAGGCATTGACAACATTGGTTGTAAACCGTCTTCGTGCAGGT
              490       500       510       520       530       540

              550        
b3111  CTGAAGATATGCGCTGTC
        ::::::: :: ::::: 
b16426 TTGAAGATTTGTGCTGTT
              550        

</pre>
<hr>
<A name=b16438>
<pre>
>><a onClick="window.open('getRecord.php?id=b16438',
                                'cpndb_record'); return false;" href="getRecord.php?id=b16438" target=_"blank">b16438</a> GG740022 Prevotella melaninogenica Oral Taxon 4  (558 nt)
 initn: 1720 init1: 1720 opt: 1759  Z-score: 84.4  bits: 25.5 E(): 1.3e+02
banded Smith-Waterman score: 1759; 79.5% identity (79.5% similar) in 557 nt overlap (1-557:1-557)
<p>

               10        20        30        40        50        60
b3111  GCAACCATCCTCACACAGGCTATCGTTACAAAGGGACTGAGGAACGTCACCGCTGGCGCG
       :: :: :::::::::::::: :: :::::  : ::: ::: ::: :: :: :: :: :: 
b16438 GCTACTATCCTCACACAGGCAATTGTTACTGAAGGATTGAAGAATGTTACAGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b3111  AACCCGATGGACTTGAAGCGCGGTATTGACAAGGCTGTGAATGCCGTAGTGGATTACATC
       ::::: :::::: : ::::: ::::: :::::::::::   :   :: :: ::: : :: 
b16438 AACCCAATGGACCTTAAGCGTGGTATCGACAAGGCTGTAGCTAAGGTTGTTGATCATATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b3111  AAGGCAAATGCTGAGCTCGTAGGCGACAACTACGACAAGATAGAGCAGGCTGCCACGGTG
       :::::   ::: ::: : :: :: :::::::: ::::::::::::::::  :: :: :: 
b16438 AAGGCTTCTGCAGAGGTAGTTGGTGACAACTATGACAAGATAGAGCAGGTAGCTACTGTA
              130       140       150       160       170       180

              190       200       210       220       230       240
b3111  TCAGCAAATAACGACCCTGAGATTGGTAAGCTCCTTGCTGACGCTATGCGCAAGGTGTCA
          :: :: ::::::::::: :: :::::: : :: :: :: :::::::: :::::::: 
b16438 AGTGCTAACAACGACCCTGAAATAGGTAAGTTGCTCGCAGATGCTATGCGTAAGGTGTCT
              190       200       210       220       230       240

              250       260       270       280       290       300
b3111  AAGGATGGTGTGATAACCATCGAGGAGAGCAAGAGCCGTGACACAAGCATCGGTGTTGTG
       ::::::::::: :: :: ::::: ::::::::::  ::::: ::::: ::::::::::: 
b16438 AAGGATGGTGTTATCACTATCGAAGAGAGCAAGACTCGTGAGACAAGTATCGGTGTTGTT
              250       260       270       280       290       300

              310       320       330       340       350       360
b3111  GAGGGTATGCAGTTTGACCGTGGATATCTGTCTGGTTACTTCGTGACAGACGCGGAGAAG
       ::::::::::::::::: ::::: :: :: :::::::::::::: :::::  : :: :::
b16438 GAGGGTATGCAGTTTGATCGTGGTTACCTCTCTGGTTACTTCGTAACAGATACAGATAAG
              310       320       330       340       350       360

              370       380       390       400       410       420
b3111  CTGGAGTGTGTTATGGAGAACCCATATATCCTCATCTACGACAAGAAGATTTCAAACCTC
        ::::::::: ::::::::::::::::::::::::::: :: ::::::::::::::: : 
b16438 ATGGAGTGTGATATGGAGAACCCATATATCCTCATCTATGATAAGAAGATTTCAAACGTT
              370       380       390       400       410       420

              430       440       450       460       470       480
b3111  AAGGAGCTTCTTCCTATCCTCCAGCCGGCGGCAGAGAGTGGCCGTGGACTGCTTATCATA
       :::::  : ::::: :: :::::::: :: :: :::::::: :::  : :: :  :::: 
b16438 AAGGACTTCCTTCCAATTCTCCAGCCAGCTGCTGAGAGTGGTCGTCCATTGTTGGTCATT
              430       440       450       460       470       480

              490       500       510       520       530       540
b3111  GCAGAGGACGTTGACTATGAAGCACTCACAACACTCGTTGCAAACCGTCTGCGTGGCGGT
       :::::::: :::::::  :: ::: : :::::: : :::: ::::::::: ::::  :::
b16438 GCAGAGGATGTTGACTCAGAGGCATTGACAACATTGGTTGTAAACCGTCTTCGTGCAGGT
              490       500       510       520       530       540

              550        
b3111  CTGAAGATATGCGCTGTC
        ::::::: :: ::::: 
b16438 TTGAAGATTTGTGCTGTT
              550        

</pre>
<hr>
<A name=b14123>
<pre>
>><a onClick="window.open('getRecord.php?id=b14123',
                                'cpndb_record'); return false;" href="getRecord.php?id=b14123" target=_"blank">b14123</a> ACBX01000045 Prevotella copri DSM 18205          (558 nt)
 initn: 1711 init1: 1711 opt: 1750  Z-score: 84.1  bits: 25.4 E(): 1.3e+02
banded Smith-Waterman score: 1750; 79.4% identity (79.4% similar) in 557 nt overlap (1-557:1-557)
<p>

               10        20        30        40        50        60
b3111  GCAACCATCCTCACACAGGCTATCGTTACAAAGGGACTGAGGAACGTCACCGCTGGCGCG
       :: :: ::::: :: ::::::::::: ::: ::::  ::: :::::: :: :: :: :: 
b14123 GCTACTATCCTGACTCAGGCTATCGTAACAGAGGGCTTGAAGAACGTTACTGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b3111  AACCCGATGGACTTGAAGCGCGGTATTGACAAGGCTGTGAATGCCGTAGTGGATTACATC
       ::::: :::::::::::::: ::::: :::::::::::   ::: :: :: :  : ::: 
b14123 AACCCAATGGACTTGAAGCGTGGTATCGACAAGGCTGTTGCTGCTGTTGTTGCCTTCATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b3111  AAGGCAAATGCTGAGCTCGTAGGCGACAACTACGACAAGATAGAGCAGGCTGCCACGGTG
       :::: : :::::::::  :::: :::::::::::: ::::: :::::::  :: :: :: 
b14123 AAGGAACATGCTGAGCAGGTAGACGACAACTACGATAAGATTGAGCAGGTGGCTACAGTT
              130       140       150       160       170       180

              190       200       210       220       230       240
b3111  TCAGCAAATAACGACCCTGAGATTGGTAAGCTCCTTGCTGACGCTATGCGCAAGGTGTCA
       :: :: :: :::::  : ::::::::::::::: : :::::::::::::::::::: :: 
b14123 TCTGCCAACAACGATGCAGAGATTGGTAAGCTCTTGGCTGACGCTATGCGCAAGGTTTCT
              190       200       210       220       230       240

              250       260       270       280       290       300
b3111  AAGGATGGTGTGATAACCATCGAGGAGAGCAAGAGCCGTGACACAAGCATCGGTGTTGTG
       ::::::::::: :: :: ::::::::::::::::::::::: :: : :::::::::::: 
b14123 AAGGATGGTGTCATCACTATCGAGGAGAGCAAGAGCCGTGATACCAACATCGGTGTTGTT
              250       260       270       280       290       300

              310       320       330       340       350       360
b3111  GAGGGTATGCAGTTTGACCGTGGATATCTGTCTGGTTACTTCGTGACAGACGCGGAGAAG
       ::::::::::::::::::::::: ::: ::   ::::::::: :::: :: :: :: :::
b14123 GAGGGTATGCAGTTTGACCGTGGTTATTTGAGCGGTTACTTCATGACTGATGCCGACAAG
              310       320       330       340       350       360

              370       380       390       400       410       420
b3111  CTGGAGTGTGTTATGGAGAACCCATATATCCTCATCTACGACAAGAAGATTTCAAACCTC
        :::::::::: ::::: :::::::: :::::  : :: :: ::::::::::: ::: : 
b14123 ATGGAGTGTGTAATGGATAACCCATACATCCTTCTTTATGATAAGAAGATTTCTAACTTG
              370       380       390       400       410       420

              430       440       450       460       470       480
b3111  AAGGAGCTTCTTCCTATCCTCCAGCCGGCGGCAGAGAGTGGCCGTGGACTGCTTATCATA
       :::::: :  : :: :: :::::::: :: :: :::::::: :::    :: :  : :: 
b14123 AAGGAGTTCTTGCCAATTCTCCAGCCTGCTGCTGAGAGTGGTCGTCCTTTGTTGGTTATC
              430       440       450       460       470       480

              490       500       510       520       530       540
b3111  GCAGAGGACGTTGACTATGAAGCACTCACAACACTCGTTGCAAACCGTCTGCGTGGCGGT
       :: ::::: ::::: : ::: ::  : :: ::  : :: :  :::::: :::::::::::
b14123 GCTGAGGATGTTGATTCTGAGGCTTTGACTACTTTGGTAGTTAACCGTTTGCGTGGCGGT
              490       500       510       520       530       540

              550        
b3111  CTGAAGATATGCGCTGTC
        ::::::: :::::::: 
b14123 TTGAAGATTTGCGCTGTG
              550        

</pre>
<hr>
<A name=b17625>
<pre>
>><a onClick="window.open('getRecord.php?id=b17625',
                                'cpndb_record'); return false;" href="getRecord.php?id=b17625" target=_"blank">b17625</a> AB547598 Prevotella copri JCM 13464              (558 nt)
 initn: 1711 init1: 1711 opt: 1750  Z-score: 84.1  bits: 25.4 E(): 1.3e+02
banded Smith-Waterman score: 1750; 79.4% identity (79.4% similar) in 557 nt overlap (1-557:1-557)
<p>

               10        20        30        40        50        60
b3111  GCAACCATCCTCACACAGGCTATCGTTACAAAGGGACTGAGGAACGTCACCGCTGGCGCG
       :: :: ::::: :: ::::::::::: ::: ::::  ::: :::::: :: :: :: :: 
b17625 GCTACTATCCTGACTCAGGCTATCGTAACAGAGGGCTTGAAGAACGTTACTGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b3111  AACCCGATGGACTTGAAGCGCGGTATTGACAAGGCTGTGAATGCCGTAGTGGATTACATC
       ::::: :::::::::::::: ::::: :::::::::::   ::: :: :: :  : ::: 
b17625 AACCCAATGGACTTGAAGCGTGGTATCGACAAGGCTGTTGCTGCTGTTGTTGCCTTCATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b3111  AAGGCAAATGCTGAGCTCGTAGGCGACAACTACGACAAGATAGAGCAGGCTGCCACGGTG
       :::: : :::::::::  :::: :::::::::::: ::::: :::::::  :: :: :: 
b17625 AAGGAACATGCTGAGCAGGTAGACGACAACTACGATAAGATTGAGCAGGTGGCTACAGTT
              130       140       150       160       170       180

              190       200       210       220       230       240
b3111  TCAGCAAATAACGACCCTGAGATTGGTAAGCTCCTTGCTGACGCTATGCGCAAGGTGTCA
       :: :: :: :::::  : ::::::::::::::: : :::::::::::::::::::: :: 
b17625 TCTGCCAACAACGATGCAGAGATTGGTAAGCTCTTGGCTGACGCTATGCGCAAGGTTTCT
              190       200       210       220       230       240

              250       260       270       280       290       300
b3111  AAGGATGGTGTGATAACCATCGAGGAGAGCAAGAGCCGTGACACAAGCATCGGTGTTGTG
       ::::::::::: :: :: ::::::::::::::::::::::: :: : :::::::::::: 
b17625 AAGGATGGTGTCATCACTATCGAGGAGAGCAAGAGCCGTGATACCAACATCGGTGTTGTT
              250       260       270       280       290       300

              310       320       330       340       350       360
b3111  GAGGGTATGCAGTTTGACCGTGGATATCTGTCTGGTTACTTCGTGACAGACGCGGAGAAG
       ::::::::::::::::::::::: ::: ::   ::::::::: :::: :: :: :: :::
b17625 GAGGGTATGCAGTTTGACCGTGGTTATTTGAGCGGTTACTTCATGACTGATGCCGACAAG
              310       320       330       340       350       360

              370       380       390       400       410       420
b3111  CTGGAGTGTGTTATGGAGAACCCATATATCCTCATCTACGACAAGAAGATTTCAAACCTC
        :::::::::: ::::: :::::::: :::::  : :: :: ::::::::::: ::: : 
b17625 ATGGAGTGTGTAATGGATAACCCATACATCCTTCTTTATGATAAGAAGATTTCTAACTTG
              370       380       390       400       410       420

              430       440       450       460       470       480
b3111  AAGGAGCTTCTTCCTATCCTCCAGCCGGCGGCAGAGAGTGGCCGTGGACTGCTTATCATA
       :::::: :  : :: :: :::::::: :: :: :::::::: :::    :: :  : :: 
b17625 AAGGAGTTCTTGCCAATTCTCCAGCCTGCTGCTGAGAGTGGTCGTCCTTTGTTGGTTATC
              430       440       450       460       470       480

              490       500       510       520       530       540
b3111  GCAGAGGACGTTGACTATGAAGCACTCACAACACTCGTTGCAAACCGTCTGCGTGGCGGT
       :: ::::: ::::: : ::: ::  : :: ::  : :: :  :::::: :::::::::::
b17625 GCTGAGGATGTTGATTCTGAGGCTTTGACTACTTTGGTAGTTAACCGTTTGCGTGGCGGT
              490       500       510       520       530       540

              550        
b3111  CTGAAGATATGCGCTGTC
        ::::::: :::::::: 
b17625 TTGAAGATTTGCGCTGTG
              550        

</pre>
<hr>
<A name=b20969>
<pre>
>><a onClick="window.open('getRecord.php?id=b20969',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20969" target=_"blank">b20969</a> ALJQ01000037 Prevotella sp. MSX73                (558 nt)
 initn: 1698 init1: 1698 opt: 1746  Z-score: 84.0  bits: 25.4 E(): 1.3e+02
banded Smith-Waterman score: 1746; 79.2% identity (79.2% similar) in 558 nt overlap (1-558:1-558)
<p>

               10        20        30        40        50        60
b3111  GCAACCATCCTCACACAGGCTATCGTTACAAAGGGACTGAGGAACGTCACCGCTGGCGCG
       :: ::::: ::::: ::::::::::: :   : :: :::: ::: :: :: :: :: :: 
b20969 GCCACCATTCTCACGCAGGCTATCGTGAACGAAGGTCTGAAGAATGTGACTGCCGGTGCC
               10        20        30        40        50        60

               70        80        90       100       110       120
b3111  AACCCGATGGACTTGAAGCGCGGTATTGACAAGGCTGTGAATGCCGTAGTGGATTACATC
       ::::: :::::::::::::::::::: :::::::::::   ::: :: :: :: :: :::
b20969 AACCCCATGGACTTGAAGCGCGGTATCGACAAGGCTGTCGCTGCTGTCGTTGACTATATC
               70        80        90       100       110       120

              130       140       150       160       170       180
b3111  AAGGCAAATGCTGAGCTCGTAGGCGACAACTACGACAAGATAGAGCAGGCTGCCACGGTG
       ::: :  :::: :: :::::::   ::::::::::::::::::::::::  ::::: :::
b20969 AAGTCTCATGCCGAACTCGTAGATCACAACTACGACAAGATAGAGCAGGTGGCCACCGTG
              130       140       150       160       170       180

              190       200       210       220       230       240
b3111  TCAGCAAATAACGACCCTGAGATTGGTAAGCTCCTTGCTGACGCTATGCGCAAGGTGTCA
          :: :: ::::: :: :: :: :: ::::: :: :: :: :: ::::::::::: :: 
b20969 AGTGCCAACAACGATCCGGAAATCGGCAAGCTGCTCGCCGATGCCATGCGCAAGGTCTCC
              190       200       210       220       230       240

              250       260       270       280       290       300
b3111  AAGGATGGTGTGATAACCATCGAGGAGAGCAAGAGCCGTGACACAAGCATCGGTGTTGTG
       :: :: ::::: :: ::::::::::::::::::::::::::::: :  :::::::: :::
b20969 AAAGACGGTGTCATCACCATCGAGGAGAGCAAGAGCCGTGACACCAATATCGGTGTGGTG
              250       260       270       280       290       300

              310       320       330       340       350       360
b3111  GAGGGTATGCAGTTTGACCGTGGATATCTGTCTGGTTACTTCGTGACAGACGCGGAGAAG
       :: ::::::::::: :::::::: ::::: :: :: :: :::::::: :: :: ::::::
b20969 GAAGGTATGCAGTTCGACCGTGGTTATCTTTCGGGCTATTTCGTGACCGATGCCGAGAAG
              310       320       330       340       350       360

              370       380       390       400       410       420
b3111  CTGGAGTGTGTTATGGAGAACCCATATATCCTCATCTACGACAAGAAGATTTCAAACCTC
        :::: :: :: ::::: :: :: :: ::::: ::::: :::::::::::::: :: :::
b20969 ATGGAATGCGTGATGGACAATCCTTACATCCTTATCTATGACAAGAAGATTTCCAATCTC
              370       380       390       400       410       420

              430       440       450       460       470       480
b3111  AAGGAGCTTCTTCCTATCCTCCAGCCGGCGGCAGAGAGTGGCCGTGGACTGCTTATCATA
       :::::  : :: :::::::: ::::: :: :: ::::: :: :::    ::::  :::: 
b20969 AAGGACTTCCTGCCTATCCTTCAGCCTGCTGCCGAGAGCGGTCGTCCGTTGCTCGTCATC
              430       440       450       460       470       480

              490       500       510       520       530       540
b3111  GCAGAGGACGTTGACTATGAAGCACTCACAACACTCGTTGCAAACCGTCTGCGTGGCGGT
       :: :: :: :: :::: ::: ::::: :: ::::: ::::  ::::::::::::::::: 
b20969 GCCGAAGATGTAGACTCTGAGGCACTGACCACACTGGTTGTCAACCGTCTGCGTGGCGGA
              490       500       510       520       530       540

              550        
b3111  CTGAAGATATGCGCTGTC
        ::::::: :: ::::::
b20969 TTGAAGATCTGTGCTGTC
              550        

</pre>
<hr>
<A name=b17607>
<pre>
>><a onClick="window.open('getRecord.php?id=b17607',
                                'cpndb_record'); return false;" href="getRecord.php?id=b17607" target=_"blank">b17607</a> AB547616 Prevotella melaninogenica JCM 6321      (558 nt)
 initn: 1702 init1: 1702 opt: 1741  Z-score: 83.9  bits: 25.3 E(): 1.4e+02
banded Smith-Waterman score: 1741; 79.2% identity (79.2% similar) in 557 nt overlap (1-557:1-557)
<p>

               10        20        30        40        50        60
b3111  GCAACCATCCTCACACAGGCTATCGTTACAAAGGGACTGAGGAACGTCACCGCTGGCGCG
       :: :: :::::::::::::: :: :::::  : ::: ::: ::: :: :: :: :: :: 
b17607 GCTACTATCCTCACACAGGCAATTGTTACTGAAGGATTGAAGAATGTTACAGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b3111  AACCCGATGGACTTGAAGCGCGGTATTGACAAGGCTGTGAATGCCGTAGTGGATTACATC
       ::::: :::::: : ::::: ::::: :::::::::::   :   :: :: ::: : :: 
b17607 AACCCAATGGACCTTAAGCGTGGTATCGACAAGGCTGTAGCTAAGGTTGTTGATCATATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b3111  AAGGCAAATGCTGAGCTCGTAGGCGACAACTACGACAAGATAGAGCAGGCTGCCACGGTG
       :::::   ::: ::: : :: :: :::::::: ::::::::::::::::  :: :: :: 
b17607 AAGGCTTCTGCAGAGGTAGTTGGTGACAACTATGACAAGATAGAGCAGGTAGCTACTGTA
              130       140       150       160       170       180

              190       200       210       220       230       240
b3111  TCAGCAAATAACGACCCTGAGATTGGTAAGCTCCTTGCTGACGCTATGCGCAAGGTGTCA
          :: :: ::::: ::::: :: :::::: : ::::: :: :::::::: ::::: :: 
b17607 AGTGCTAACAACGATCCTGAAATAGGTAAGTTGCTTGCAGATGCTATGCGTAAGGTATCT
              190       200       210       220       230       240

              250       260       270       280       290       300
b3111  AAGGATGGTGTGATAACCATCGAGGAGAGCAAGAGCCGTGACACAAGCATCGGTGTTGTG
       ::::::::::: :: :: :: :: ::::::::::  ::::: ::::: ::::::::::: 
b17607 AAGGATGGTGTTATCACTATTGAAGAGAGCAAGACTCGTGAGACAAGTATCGGTGTTGTT
              250       260       270       280       290       300

              310       320       330       340       350       360
b3111  GAGGGTATGCAGTTTGACCGTGGATATCTGTCTGGTTACTTCGTGACAGACGCGGAGAAG
       ::::::::::::::::: ::::: :: :: :::::::::::::: :::::  : :: :::
b17607 GAGGGTATGCAGTTTGATCGTGGTTACCTCTCTGGTTACTTCGTAACAGATACAGATAAG
              310       320       330       340       350       360

              370       380       390       400       410       420
b3111  CTGGAGTGTGTTATGGAGAACCCATATATCCTCATCTACGACAAGAAGATTTCAAACCTC
        ::::::::: :::::::::::::::::::::::::::::: ::::::::::::::: : 
b17607 ATGGAGTGTGATATGGAGAACCCATATATCCTCATCTACGATAAGAAGATTTCAAACGTT
              370       380       390       400       410       420

              430       440       450       460       470       480
b3111  AAGGAGCTTCTTCCTATCCTCCAGCCGGCGGCAGAGAGTGGCCGTGGACTGCTTATCATA
       :::::  : ::::: ::::: ::::: :: :: :::::::: :::  : :  :  :::: 
b17607 AAGGACTTCCTTCCAATCCTACAGCCAGCTGCTGAGAGTGGTCGTCCATTATTGGTCATT
              430       440       450       460       470       480

              490       500       510       520       530       540
b3111  GCAGAGGACGTTGACTATGAAGCACTCACAACACTCGTTGCAAACCGTCTGCGTGGCGGT
       :::::::: :::::::  :: ::: : :::::: : :::: ::::::::: ::::  :::
b17607 GCAGAGGATGTTGACTCAGAGGCATTGACAACATTGGTTGTAAACCGTCTTCGTGCAGGT
              490       500       510       520       530       540

              550        
b3111  CTGAAGATATGCGCTGTC
        ::::::: :: ::::: 
b17607 TTGAAGATTTGTGCTGTT
              550        

</pre>
<hr>
<A name=b33882>
<pre>
>><a onClick="window.open('getRecord.php?id=b33882',
                                'cpndb_record'); return false;" href="getRecord.php?id=b33882" target=_"blank">b33882</a> NZ_QSCI01000025 Prevotella  copri OF03-3         (558 nt)
 initn: 1702 init1: 1702 opt: 1741  Z-score: 83.9  bits: 25.3 E(): 1.4e+02
banded Smith-Waterman score: 1741; 79.2% identity (79.2% similar) in 557 nt overlap (1-557:1-557)
<p>

               10        20        30        40        50        60
b3111  GCAACCATCCTCACACAGGCTATCGTTACAAAGGGACTGAGGAACGTCACCGCTGGCGCG
       :: :: ::::: :: ::::::::::: ::: ::::  ::: :::::: :: :: :: :: 
b33882 GCTACTATCCTGACTCAGGCTATCGTAACAGAGGGCTTGAAGAACGTTACTGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b3111  AACCCGATGGACTTGAAGCGCGGTATTGACAAGGCTGTGAATGCCGTAGTGGATTACATC
       ::::: ::::::::::: :: ::::: :::::::::::   ::: :: :: :  : ::::
b33882 AACCCAATGGACTTGAAACGTGGTATCGACAAGGCTGTAGCTGCTGTTGTTGCCTTCATC
               70        80        90       100       110       120

              130       140       150       160       170       180
b3111  AAGGCAAATGCTGAGCTCGTAGGCGACAACTACGACAAGATAGAGCAGGCTGCCACGGTG
       :::: : ::::::: :  :::: :::::::::::: ::::: :::::::  :: :: :: 
b33882 AAGGAACATGCTGAACAGGTAGACGACAACTACGATAAGATTGAGCAGGTGGCTACAGTT
              130       140       150       160       170       180

              190       200       210       220       230       240
b3111  TCAGCAAATAACGACCCTGAGATTGGTAAGCTCCTTGCTGACGCTATGCGCAAGGTGTCA
       :: :: :: :::::  : ::::::::::::::: : :::::::::::::::::::: :: 
b33882 TCTGCCAACAACGATGCAGAGATTGGTAAGCTCTTGGCTGACGCTATGCGCAAGGTTTCT
              190       200       210       220       230       240

              250       260       270       280       290       300
b3111  AAGGATGGTGTGATAACCATCGAGGAGAGCAAGAGCCGTGACACAAGCATCGGTGTTGTG
       ::::::::::: :: :: ::::::::::::::::::::::: :: : :::::::::::: 
b33882 AAGGATGGTGTCATCACTATCGAGGAGAGCAAGAGCCGTGATACCAACATCGGTGTTGTT
              250       260       270       280       290       300

              310       320       330       340       350       360
b3111  GAGGGTATGCAGTTTGACCGTGGATATCTGTCTGGTTACTTCGTGACAGACGCGGAGAAG
       ::::::::::::::::::::::: ::: ::   ::::::::: :::: :: :: :: :::
b33882 GAGGGTATGCAGTTTGACCGTGGTTATTTGAGCGGTTACTTCATGACTGATGCAGACAAG
              310       320       330       340       350       360

              370       380       390       400       410       420
b3111  CTGGAGTGTGTTATGGAGAACCCATATATCCTCATCTACGACAAGAAGATTTCAAACCTC
        :::::::::: ::::: :::::::: :::::  : :: :: ::::::::::: ::: : 
b33882 ATGGAGTGTGTAATGGATAACCCATACATCCTTCTTTATGATAAGAAGATTTCTAACTTG
              370       380       390       400       410       420

              430       440       450       460       470       480
b3111  AAGGAGCTTCTTCCTATCCTCCAGCCGGCGGCAGAGAGTGGCCGTGGACTGCTTATCATA
       :::::: :  : :: :: :::::::: :: :: :::::::: :::    :: :  : :: 
b33882 AAGGAGTTCTTGCCAATTCTCCAGCCTGCTGCTGAGAGTGGTCGTCCTTTGTTGGTTATC
              430       440       450       460       470       480

              490       500       510       520       530       540
b3111  GCAGAGGACGTTGACTATGAAGCACTCACAACACTCGTTGCAAACCGTCTGCGTGGCGGT
       :: ::::: ::::: : ::: ::  : :: ::  : :: :  :::::: :::::::::::
b33882 GCTGAGGATGTTGATTCTGAGGCTTTGACTACTTTGGTAGTTAACCGTTTGCGTGGCGGT
              490       500       510       520       530       540

              550        
b3111  CTGAAGATATGCGCTGTC
        ::::::: :::::::: 
b33882 TTGAAGATTTGCGCTGTG
              550        

</pre>
<hr>
<A name=b14417>
<pre>
>><a onClick="window.open('getRecord.php?id=b14417',
                                'cpndb_record'); return false;" href="getRecord.php?id=b14417" target=_"blank">b14417</a> CP002122 Prevotella melaninogenica ATCC 25845    (558 nt)
 initn: 1702 init1: 1702 opt: 1741  Z-score: 83.9  bits: 25.3 E(): 1.4e+02
banded Smith-Waterman score: 1741; 79.2% identity (79.2% similar) in 557 nt overlap (1-557:1-557)
<p>

               10        20        30        40        50        60
b3111  GCAACCATCCTCACACAGGCTATCGTTACAAAGGGACTGAGGAACGTCACCGCTGGCGCG
       :: :: :::::::::::::: :: :::::  : ::: ::: ::: :: :: :: :: :: 
b14417 GCTACTATCCTCACACAGGCAATTGTTACTGAAGGATTGAAGAATGTTACAGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b3111  AACCCGATGGACTTGAAGCGCGGTATTGACAAGGCTGTGAATGCCGTAGTGGATTACATC
       ::::: :::::: : ::::: ::::: :::::::::::   :   :: :: ::: : :: 
b14417 AACCCAATGGACCTTAAGCGTGGTATCGACAAGGCTGTAGCTAAGGTTGTTGATCATATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b3111  AAGGCAAATGCTGAGCTCGTAGGCGACAACTACGACAAGATAGAGCAGGCTGCCACGGTG
       :::::   ::: ::: : :: :: :::::::: ::::::::::::::::  :: :: :: 
b14417 AAGGCTTCTGCAGAGGTAGTTGGTGACAACTATGACAAGATAGAGCAGGTAGCTACTGTA
              130       140       150       160       170       180

              190       200       210       220       230       240
b3111  TCAGCAAATAACGACCCTGAGATTGGTAAGCTCCTTGCTGACGCTATGCGCAAGGTGTCA
          :: :: ::::: ::::: :: :::::: : ::::: :: :::::::: ::::: :: 
b14417 AGTGCTAACAACGATCCTGAAATAGGTAAGTTGCTTGCAGATGCTATGCGTAAGGTATCT
              190       200       210       220       230       240

              250       260       270       280       290       300
b3111  AAGGATGGTGTGATAACCATCGAGGAGAGCAAGAGCCGTGACACAAGCATCGGTGTTGTG
       ::::::::::: :: :: :: :: ::::::::::  ::::: ::::: ::::::::::: 
b14417 AAGGATGGTGTTATCACTATTGAAGAGAGCAAGACTCGTGAGACAAGTATCGGTGTTGTT
              250       260       270       280       290       300

              310       320       330       340       350       360
b3111  GAGGGTATGCAGTTTGACCGTGGATATCTGTCTGGTTACTTCGTGACAGACGCGGAGAAG
       ::::::::::::::::: ::::: :: :: :::::::::::::: :::::  : :: :::
b14417 GAGGGTATGCAGTTTGATCGTGGTTACCTCTCTGGTTACTTCGTAACAGATACAGATAAG
              310       320       330       340       350       360

              370       380       390       400       410       420
b3111  CTGGAGTGTGTTATGGAGAACCCATATATCCTCATCTACGACAAGAAGATTTCAAACCTC
        ::::::::: :::::::::::::::::::::::::::::: ::::::::::::::: : 
b14417 ATGGAGTGTGATATGGAGAACCCATATATCCTCATCTACGATAAGAAGATTTCAAACGTT
              370       380       390       400       410       420

              430       440       450       460       470       480
b3111  AAGGAGCTTCTTCCTATCCTCCAGCCGGCGGCAGAGAGTGGCCGTGGACTGCTTATCATA
       :::::  : ::::: ::::: ::::: :: :: :::::::: :::  : :  :  :::: 
b14417 AAGGACTTCCTTCCAATCCTACAGCCAGCTGCTGAGAGTGGTCGTCCATTATTGGTCATT
              430       440       450       460       470       480

              490       500       510       520       530       540
b3111  GCAGAGGACGTTGACTATGAAGCACTCACAACACTCGTTGCAAACCGTCTGCGTGGCGGT
       :::::::: :::::::  :: ::: : :::::: : :::: ::::::::: ::::  :::
b14417 GCAGAGGATGTTGACTCAGAGGCATTGACAACATTGGTTGTAAACCGTCTTCGTGCAGGT
              490       500       510       520       530       540

              550        
b3111  CTGAAGATATGCGCTGTC
        ::::::: :: ::::: 
b14417 TTGAAGATTTGTGCTGTT
              550        

</pre>
<hr>
<A name=b17608>
<pre>
>><a onClick="window.open('getRecord.php?id=b17608',
                                'cpndb_record'); return false;" href="getRecord.php?id=b17608" target=_"blank">b17608</a> AB547615 Prevotella melaninogenica JCM 6325      (558 nt)
 initn: 1702 init1: 1702 opt: 1741  Z-score: 83.9  bits: 25.3 E(): 1.4e+02
banded Smith-Waterman score: 1741; 79.2% identity (79.2% similar) in 557 nt overlap (1-557:1-557)
<p>

               10        20        30        40        50        60
b3111  GCAACCATCCTCACACAGGCTATCGTTACAAAGGGACTGAGGAACGTCACCGCTGGCGCG
       :: :: :::::::::::::: :: :::::  : ::: ::: ::: :: :: :: :: :: 
b17608 GCTACTATCCTCACACAGGCAATTGTTACTGAAGGATTGAAGAATGTTACAGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b3111  AACCCGATGGACTTGAAGCGCGGTATTGACAAGGCTGTGAATGCCGTAGTGGATTACATC
       ::::: :::::: : ::::: ::::: :::::::::::   :   :: :: ::: : :: 
b17608 AACCCAATGGACCTTAAGCGTGGTATCGACAAGGCTGTAGCTAAGGTTGTTGATCATATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b3111  AAGGCAAATGCTGAGCTCGTAGGCGACAACTACGACAAGATAGAGCAGGCTGCCACGGTG
       :::::   ::: ::: : :: :: :::::::: ::::::::::::::::  :: :: :: 
b17608 AAGGCTTCTGCAGAGGTAGTTGGTGACAACTATGACAAGATAGAGCAGGTAGCTACTGTA
              130       140       150       160       170       180

              190       200       210       220       230       240
b3111  TCAGCAAATAACGACCCTGAGATTGGTAAGCTCCTTGCTGACGCTATGCGCAAGGTGTCA
          :: :: ::::: ::::: :: :::::: : ::::: :: :::::::: ::::: :: 
b17608 AGTGCTAACAACGATCCTGAAATAGGTAAGTTGCTTGCAGATGCTATGCGTAAGGTATCT
              190       200       210       220       230       240

              250       260       270       280       290       300
b3111  AAGGATGGTGTGATAACCATCGAGGAGAGCAAGAGCCGTGACACAAGCATCGGTGTTGTG
       ::::::::::: :: :: :: :: ::::::::::  ::::: ::::: ::::::::::: 
b17608 AAGGATGGTGTTATCACTATTGAAGAGAGCAAGACTCGTGAGACAAGTATCGGTGTTGTT
              250       260       270       280       290       300

              310       320       330       340       350       360
b3111  GAGGGTATGCAGTTTGACCGTGGATATCTGTCTGGTTACTTCGTGACAGACGCGGAGAAG
       ::::::::::::::::: ::::: :: :: :::::::::::::: :::::  : :: :::
b17608 GAGGGTATGCAGTTTGATCGTGGTTACCTCTCTGGTTACTTCGTAACAGATACAGATAAG
              310       320       330       340       350       360

              370       380       390       400       410       420
b3111  CTGGAGTGTGTTATGGAGAACCCATATATCCTCATCTACGACAAGAAGATTTCAAACCTC
        ::::::::: :::::::::::::::::::::::::::::: ::::::::::::::: : 
b17608 ATGGAGTGTGATATGGAGAACCCATATATCCTCATCTACGATAAGAAGATTTCAAACGTT
              370       380       390       400       410       420

              430       440       450       460       470       480
b3111  AAGGAGCTTCTTCCTATCCTCCAGCCGGCGGCAGAGAGTGGCCGTGGACTGCTTATCATA
       :::::  : ::::: ::::: ::::: :: :: :::::::: :::  : :  :  :::: 
b17608 AAGGACTTCCTTCCAATCCTACAGCCAGCTGCTGAGAGTGGTCGTCCATTATTGGTCATT
              430       440       450       460       470       480

              490       500       510       520       530       540
b3111  GCAGAGGACGTTGACTATGAAGCACTCACAACACTCGTTGCAAACCGTCTGCGTGGCGGT
       :::::::: :::::::  :: ::: : :::::: : :::: ::::::::: ::::  :::
b17608 GCAGAGGATGTTGACTCAGAGGCATTGACAACATTGGTTGTAAACCGTCTTCGTGCAGGT
              490       500       510       520       530       540

              550        
b3111  CTGAAGATATGCGCTGTC
        ::::::: :: ::::: 
b17608 TTGAAGATTTGTGCTGTT
              550        

</pre>
<hr>
<A name=b7335>
<pre>
>><a onClick="window.open('getRecord.php?id=b7335',
                                'cpndb_record'); return false;" href="getRecord.php?id=b7335" target=_"blank">b7335</a> AY837570 Prevotella melaninogenica ATCC 25845D    (558 nt)
 initn: 1702 init1: 1702 opt: 1741  Z-score: 83.9  bits: 25.3 E(): 1.4e+02
banded Smith-Waterman score: 1741; 79.2% identity (79.2% similar) in 557 nt overlap (1-557:1-557)
<p>

               10        20        30        40        50        60
b3111  GCAACCATCCTCACACAGGCTATCGTTACAAAGGGACTGAGGAACGTCACCGCTGGCGCG
       :: :: :::::::::::::: :: :::::  : ::: ::: ::: :: :: :: :: :: 
b7335  GCTACTATCCTCACACAGGCAATTGTTACTGAAGGATTGAAGAATGTTACAGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b3111  AACCCGATGGACTTGAAGCGCGGTATTGACAAGGCTGTGAATGCCGTAGTGGATTACATC
       ::::: :::::: : ::::: ::::: :::::::::::   :   :: :: ::: : :: 
b7335  AACCCAATGGACCTTAAGCGTGGTATCGACAAGGCTGTAGCTAAGGTTGTTGATCATATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b3111  AAGGCAAATGCTGAGCTCGTAGGCGACAACTACGACAAGATAGAGCAGGCTGCCACGGTG
       :::::   ::: ::: : :: :: :::::::: ::::::::::::::::  :: :: :: 
b7335  AAGGCTTCTGCAGAGGTAGTTGGTGACAACTATGACAAGATAGAGCAGGTAGCTACTGTA
              130       140       150       160       170       180

              190       200       210       220       230       240
b3111  TCAGCAAATAACGACCCTGAGATTGGTAAGCTCCTTGCTGACGCTATGCGCAAGGTGTCA
          :: :: ::::: ::::: :: :::::: : ::::: :: :::::::: ::::: :: 
b7335  AGTGCTAACAACGATCCTGAAATAGGTAAGTTGCTTGCAGATGCTATGCGTAAGGTATCT
              190       200       210       220       230       240

              250       260       270       280       290       300
b3111  AAGGATGGTGTGATAACCATCGAGGAGAGCAAGAGCCGTGACACAAGCATCGGTGTTGTG
       ::::::::::: :: :: :: :: ::::::::::  ::::: ::::: ::::::::::: 
b7335  AAGGATGGTGTTATCACTATTGAAGAGAGCAAGACTCGTGAGACAAGTATCGGTGTTGTT
              250       260       270       280       290       300

              310       320       330       340       350       360
b3111  GAGGGTATGCAGTTTGACCGTGGATATCTGTCTGGTTACTTCGTGACAGACGCGGAGAAG
       ::::::::::::::::: ::::: :: :: :::::::::::::: :::::  : :: :::
b7335  GAGGGTATGCAGTTTGATCGTGGTTACCTCTCTGGTTACTTCGTAACAGATACAGATAAG
              310       320       330       340       350       360

              370       380       390       400       410       420
b3111  CTGGAGTGTGTTATGGAGAACCCATATATCCTCATCTACGACAAGAAGATTTCAAACCTC
        ::::::::: :::::::::::::::::::::::::::::: ::::::::::::::: : 
b7335  ATGGAGTGTGATATGGAGAACCCATATATCCTCATCTACGATAAGAAGATTTCAAACGTT
              370       380       390       400       410       420

              430       440       450       460       470       480
b3111  AAGGAGCTTCTTCCTATCCTCCAGCCGGCGGCAGAGAGTGGCCGTGGACTGCTTATCATA
       :::::  : ::::: ::::: ::::: :: :: :::::::: :::  : :  :  :::: 
b7335  AAGGACTTCCTTCCAATCCTACAGCCAGCTGCTGAGAGTGGTCGTCCATTATTGGTCATT
              430       440       450       460       470       480

              490       500       510       520       530       540
b3111  GCAGAGGACGTTGACTATGAAGCACTCACAACACTCGTTGCAAACCGTCTGCGTGGCGGT
       :::::::: :::::::  :: ::: : :::::: : :::: ::::::::: ::::  :::
b7335  GCAGAGGATGTTGACTCAGAGGCATTGACAACATTGGTTGTAAACCGTCTTCGTGCAGGT
              490       500       510       520       530       540

              550        
b3111  CTGAAGATATGCGCTGTC
        ::::::: :: ::::: 
b7335  TTGAAGATTTGTGCTGTT
              550        

</pre>
<hr>
<A name=b15898>
<pre>
>><a onClick="window.open('getRecord.php?id=b15898',
                                'cpndb_record'); return false;" href="getRecord.php?id=b15898" target=_"blank">b15898</a> ADEG01000062 Prevotella buccalis ATCC 35310      (558 nt)
 initn: 1723 init1: 1723 opt: 1723  Z-score: 83.3  bits: 25.2 E(): 1.5e+02
banded Smith-Waterman score: 1723; 78.8% identity (78.8% similar) in 557 nt overlap (1-557:1-557)
<p>

               10        20        30        40        50        60
b3111  GCAACCATCCTCACACAGGCTATCGTTACAAAGGGACTGAGGAACGTCACCGCTGGCGCG
       ::::::::: : :::::::: :: ::  :  : ::  ::: :::::: :::::::: :: 
b15898 GCAACCATCTTGACACAGGCCATTGTGTCTGAAGGTTTGAAGAACGTGACCGCTGGTGCC
               10        20        30        40        50        60

               70        80        90       100       110       120
b3111  AACCCGATGGACTTGAAGCGCGGTATTGACAAGGCTGTGAATGCCGTAGTGGATTACATC
       ::::: ::::: :::::::: ::::::::::::::::: : ::: :: :: :: :: :::
b15898 AACCCCATGGATTTGAAGCGTGGTATTGACAAGGCTGTCAGTGCAGTGGTTGAATATATC
               70        80        90       100       110       120

              130       140       150       160       170       180
b3111  AAGGCAAATGCTGAGCTCGTAGGCGACAACTACGACAAGATAGAGCAGGCTGCCACGGTG
       :::::  :::: :: :  :: ::  :::: :::::::::::::: :: :  :: :: :::
b15898 AAGGCGCATGCAGAACAAGTGGGTAACAATTACGACAAGATAGAACAAGTGGCTACCGTG
              130       140       150       160       170       180

              190       200       210       220       230       240
b3111  TCAGCAAATAACGACCCTGAGATTGGTAAGCTCCTTGCTGACGCTATGCGCAAGGTGTCA
       :: :: :: :::::: : ::::::::::::::: : :: ::::::::::::::::::   
b15898 TCTGCTAACAACGACGCAGAGATTGGTAAGCTCTTGGCCGACGCTATGCGCAAGGTGAGC
              190       200       210       220       230       240

              250       260       270       280       290       300
b3111  AAGGATGGTGTGATAACCATCGAGGAGAGCAAGAGCCGTGACACAAGCATCGGTGTTGTG
       ::: : :::::::: :: :::::::::::::::::::: :: :: : :::::: :: :: 
b15898 AAGAACGGTGTGATCACTATCGAGGAGAGCAAGAGCCGCGATACCAACATCGGCGTGGTA
              250       260       270       280       290       300

              310       320       330       340       350       360
b3111  GAGGGTATGCAGTTTGACCGTGGATATCTGTCTGGTTACTTCGTGACAGACGCGGAGAAG
       :::::::::::::::::::: :::::::::::  ::::::::::::: ::: :::: :::
b15898 GAGGGTATGCAGTTTGACCGCGGATATCTGTCAAGTTACTTCGTGACCGACACGGACAAG
              310       320       330       340       350       360

              370       380       390       400       410       420
b3111  CTGGAGTGTGTTATGGAGAACCCATATATCCTCATCTACGACAAGAAGATTTCAAACCTC
        ::::: :::: ::::: :: ::::: ::: : :: ::::: :::::::: :: ::: ::
b15898 ATGGAGAGTGTGATGGAAAATCCATACATCTTGATTTACGAAAAGAAGATATCCAACATC
              370       380       390       400       410       420

              430       440       450       460       470       480
b3111  AAGGAGCTTCTTCCTATCCTCCAGCCGGCGGCAGAGAGTGGCCGTGGACTGCTTATCATA
       :: ::  :  : :::::: : :::   :: :: :: :::::::::  : :: :  :::: 
b15898 AAAGAATTCTTACCTATCTTGCAGAATGCAGCCGAAAGTGGCCGTCCATTGTTGGTCATC
              430       440       450       460       470       480

              490       500       510       520       530       540
b3111  GCAGAGGACGTTGACTATGAAGCACTCACAACACTCGTTGCAAACCGTCTGCGTGGCGGT
       :::::::: :: :: : ::: ::: : :::::  : ::::  ::::: ::::::: ::::
b15898 GCAGAGGATGTAGATTCTGAGGCATTGACAACGTTGGTTGTGAACCGCCTGCGTGCCGGT
              490       500       510       520       530       540

              550        
b3111  CTGAAGATATGCGCTGTC
        :::::::::::::::: 
b15898 TTGAAGATATGCGCTGTT
              550        

</pre>
<hr>
<A name=b6838>
<pre>
>><a onClick="window.open('getRecord.php?id=b6838',
                                'cpndb_record'); return false;" href="getRecord.php?id=b6838" target=_"blank">b6838</a> AY691277 Prevotella buccae ATCC 33574             (558 nt)
 initn: 1671 init1: 1671 opt: 1719  Z-score: 83.1  bits: 25.2 E(): 1.5e+02
banded Smith-Waterman score: 1719; 78.7% identity (78.7% similar) in 558 nt overlap (1-558:1-558)
<p>

               10        20        30        40        50        60
b3111  GCAACCATCCTCACACAGGCTATCGTTACAAAGGGACTGAGGAACGTCACCGCTGGCGCG
       :: ::::: ::::: ::::::::::: :   : :: :::: ::: :: :: :: :: :: 
b6838  GCCACCATTCTCACGCAGGCTATCGTGAATGAAGGTCTGAAGAATGTGACTGCCGGTGCC
               10        20        30        40        50        60

               70        80        90       100       110       120
b3111  AACCCGATGGACTTGAAGCGCGGTATTGACAAGGCTGTGAATGCCGTAGTGGATTACATC
       ::::: :::::::::::::::::::: :::::::::::   ::: :: :: :: :: :::
b6838  AACCCCATGGACTTGAAGCGCGGTATCGACAAGGCTGTCGCTGCTGTCGTTGACTATATC
               70        80        90       100       110       120

              130       140       150       160       170       180
b3111  AAGGCAAATGCTGAGCTCGTAGGCGACAACTACGACAAGATAGAGCAGGCTGCCACGGTG
       ::: :  :::: :: :::::::   ::::::::::::::::::::::::  ::::: :::
b6838  AAGTCTCATGCCGAACTCGTAGATCACAACTACGACAAGATAGAGCAGGTGGCCACCGTG
              130       140       150       160       170       180

              190       200       210       220       230       240
b3111  TCAGCAAATAACGACCCTGAGATTGGTAAGCTCCTTGCTGACGCTATGCGCAAGGTGTCA
          :: :: ::::: :: :: :: :: ::::: :: :: :: :: :::::::: :: :: 
b6838  AGTGCCAACAACGATCCGGAAATCGGCAAGCTGCTCGCCGATGCCATGCGCAAAGTCTCC
              190       200       210       220       230       240

              250       260       270       280       290       300
b3111  AAGGATGGTGTGATAACCATCGAGGAGAGCAAGAGCCGTGACACAAGCATCGGTGTTGTG
       :: :: ::::: :: ::::::::::::::::::::::: ::::: :  :::::::: :::
b6838  AAAGACGGTGTCATCACCATCGAGGAGAGCAAGAGCCGCGACACCAATATCGGTGTGGTG
              250       260       270       280       290       300

              310       320       330       340       350       360
b3111  GAGGGTATGCAGTTTGACCGTGGATATCTGTCTGGTTACTTCGTGACAGACGCGGAGAAG
       :: ::::::::::: ::::: :: ::::: :: :: :: :::::::: :: :: ::::::
b6838  GAAGGTATGCAGTTCGACCGCGGTTATCTTTCGGGCTATTTCGTGACCGATGCTGAGAAG
              310       320       330       340       350       360

              370       380       390       400       410       420
b3111  CTGGAGTGTGTTATGGAGAACCCATATATCCTCATCTACGACAAGAAGATTTCAAACCTC
        :::: :: :: ::::: :: :: :: ::::: ::::: :::::::::::::: :: :::
b6838  ATGGAATGCGTGATGGACAATCCTTACATCCTTATCTATGACAAGAAGATTTCCAATCTC
              370       380       390       400       410       420

              430       440       450       460       470       480
b3111  AAGGAGCTTCTTCCTATCCTCCAGCCGGCGGCAGAGAGTGGCCGTGGACTGCTTATCATA
       :::::  : :: :::::::: ::::: :: :: ::::: :: :::    ::::  :::: 
b6838  AAGGACTTCCTGCCTATCCTTCAGCCTGCTGCCGAGAGCGGTCGTCCGTTGCTCGTCATC
              430       440       450       460       470       480

              490       500       510       520       530       540
b3111  GCAGAGGACGTTGACTATGAAGCACTCACAACACTCGTTGCAAACCGTCTGCGTGGCGGT
       :: :: :: :: :::: ::: ::::: :: ::::: ::::  ::::::::::::::::: 
b6838  GCCGAAGATGTAGACTCTGAGGCACTGACCACACTGGTTGTCAACCGTCTGCGTGGCGGA
              490       500       510       520       530       540

              550        
b3111  CTGAAGATATGCGCTGTC
        ::::::: :: ::::::
b6838  TTGAAGATCTGTGCTGTC
              550        

</pre>
<hr>
<p><pre>


558 residues in 1 query   sequences
10433008 residues in 18820 library sequences
 Scomplib [35.03]
 start: Mon Jul 22 06:36:55 2024 done: Mon Jul 22 06:36:58 2024
 Total Scan time:  2.310 Total Display time:  0.010

Function used was FASTA [version 35.03 Feb. 18, 2008]
</pre>