/var/www/html/cpndb/fasta_results/b17727.fasta# /data/www/cpndb/fasta35 -E 200 -Q -m 6 -b 20 -d 20 -z 2 -H /data/www/cpndb/fasta_results/b17727 /data/www/cpndb/blastDBs/reference_a_nut
FASTA searches a protein or DNA sequence data bank
 version 35.03 Feb. 18, 2008
Please cite:
 W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: /data/www/cpndb/fasta_results/b17727
  1>>>b17727 552 nt - 552 nt
Library: /data/www/cpndb/blastDBs/reference_a_nut 10433008 residues in 18820 sequences

10433008 residues in 18820 sequences
Statistics: MLE_cen statistics: Lambda= 0.0045;  K=3.224e-05 (cen=941)
Algorithm: FASTA (3.5 Sept 2006) [optimized]
Parameters: +5/-4 matrix (5:-4) ktup: 6
 join: 51, opt: 36, open/ext: -12/-4, width:  16
 Scan time:  2.200



The best scores are:                                      opt bits E(18820)
b18038 CP002251 Corynebacterium pseudotubercul ( 552) [f] 2760 33.0    0.69 align
b19351 CP002924 Corynebacterium pseudotubercul ( 552) [f] 2760 33.0    0.69 align
b21146 NC_017462 Corynebacterium pseudotubercu ( 552) [f] 2760 33.0    0.69 align
b17488 CP002097 Corynebacterium pseudotubercul ( 552) [f] 2751 32.9    0.72 align
b7204 AY781285 Corynebacterium pseudotuberculo ( 552) [f] 2751 32.9    0.72 align
b21136 NC_017945 Corynebacterium pseudotubercu ( 552) [f] 2742 32.8    0.75 align
b19681 CP003061 Corynebacterium pseudotubercul ( 552) [f] 2742 32.8    0.75 align
b21006 NC_018019 Corynebacterium pseudotubercu ( 552) [f] 2742 32.8    0.75 align
b22728 NC_016932 Corynebacterium pseudotubercu ( 552) [f] 2742 32.8    0.75 align
b20627 NC_017730 Corynebacterium pseudotubercu ( 552) [f] 2733 32.8    0.78 align
b27804 NC_018101 Corynebacterium  ulcerans  01 ( 552) [f] 2256 29.7     6.7 align
b19074 CP002791 Corynebacterium ulcerans BR-AD ( 552) [f] 2256 29.7     6.7 align
b19076 CP002790 Corynebacterium ulcerans 809   ( 552) [f] 2256 29.7     6.7 align
b28302 AYUJ01000002 Corynebacterium  ulcerans  ( 552) [f] 2247 29.6       7 align
b35811 NZ_SDQO02000002 Corynebacterium silvati ( 552) [f] 2202 29.3     8.6 align
b20549 CP003208 Corynebacterium diphtheriae IN ( 552) [f] 1572 25.2 1.5e+02 align
b27784 AUZN01000036 Corynebacterium  diphtheri ( 552) [f] 1554 25.1 1.6e+02 align
b20360 NC_016801 Corynebacterium diphtheriae C ( 552) [f] 1554 25.1 1.6e+02 align
b20369 NC_016785 Corynebacterium diphtheriae C ( 552) [f] 1545 25.0 1.7e+02 align
b20522 NC_016800 Corynebacterium diphtheriae B ( 552) [f] 1545 25.0 1.7e+02 align


>>>b17727, 552 nt vs /data/www/cpndb/blastDBs/reference_a_nut library

>>b18038 CP002251 Corynebacterium pseudotuberculosis I19  (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 125.2  bits: 33.0 E(): 0.69
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b17727 GCAACGCTGCTGGCCCAAGCAGTTATTACAGAGGGCTTGCGCAACGTTGCAGCTGGAGCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b18038 GCAACGCTGCTGGCCCAAGCAGTTATTACAGAGGGCTTGCGCAACGTTGCAGCTGGAGCT 10 20 30 40 50 60 70 80 90 100 110 120 b17727 AATCCTGTTGAGCTGAACCGAGGCATCCTTGCGGCAGCTGATAAAGCCGTGGAGAAGCTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b18038 AATCCTGTTGAGCTGAACCGAGGCATCCTTGCGGCAGCTGATAAAGCCGTGGAGAAGCTA 70 80 90 100 110 120 130 140 150 160 170 180 b17727 GGCGAGCGTGCAGCGGAAGTAGCCTCTGCCGCAGACATTGCCAACGTAGCCACTGTTTCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b18038 GGCGAGCGTGCAGCGGAAGTAGCCTCTGCCGCAGACATTGCCAACGTAGCCACTGTTTCT 130 140 150 160 170 180 190 200 210 220 230 240 b17727 TCTCGCGATGCTGAGATCGGTGACATGGTCGCCGCAGCAATGGAAAAAGTGGGCAAGGAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b18038 TCTCGCGATGCTGAGATCGGTGACATGGTCGCCGCAGCAATGGAAAAAGTGGGCAAGGAC 190 200 210 220 230 240 250 260 270 280 290 300 b17727 GGTGTGGTAACGGTTGAAGAGTCTCAGTCCATCGAGTCCTACCTTGATGTGACCGAAGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b18038 GGTGTGGTAACGGTTGAAGAGTCTCAGTCCATCGAGTCCTACCTTGATGTGACCGAAGGA 250 260 270 280 290 300 310 320 330 340 350 360 b17727 GTGTCCTTTGACAAGGGCTACCTATCTCCGTACTTCATCACCGACACCGACTCTCAACGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b18038 GTGTCCTTTGACAAGGGCTACCTATCTCCGTACTTCATCACCGACACCGACTCTCAACGA 310 320 330 340 350 360 370 380 390 400 410 420 b17727 GCCGAGCTAGATGATCCGTACATTCTCCTCGTACGGAATAAGATCTCCTCGCTGCCGGAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b18038 GCCGAGCTAGATGATCCGTACATTCTCCTCGTACGGAATAAGATCTCCTCGCTGCCGGAC 370 380 390 400 410 420 430 440 450 460 470 480 b17727 TTCCTGCCTTTGCTGGAAAAGACAGTCGAAGCGAACAAGCCGGTTCTTATCATCGCGGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b18038 TTCCTGCCTTTGCTGGAAAAGACAGTCGAAGCGAACAAGCCGGTTCTTATCATCGCGGAA 430 440 450 460 470 480 490 500 510 520 530 540 b17727 GACGTAGAGGGTGAGCCTCTGCAGACTCTCGTGGTGAACTCCATCCGGAAGACGCTGCGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b18038 GACGTAGAGGGTGAGCCTCTGCAGACTCTCGTGGTGAACTCCATCCGGAAGACGCTGCGC 490 500 510 520 530 540 550 b17727 GCTGTTGCCGTG :::::::::::: b18038 GCTGTTGCCGTG 550


>>b19351 CP002924 Corynebacterium pseudotuberculosis PAT  (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 125.2  bits: 33.0 E(): 0.69
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b17727 GCAACGCTGCTGGCCCAAGCAGTTATTACAGAGGGCTTGCGCAACGTTGCAGCTGGAGCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19351 GCAACGCTGCTGGCCCAAGCAGTTATTACAGAGGGCTTGCGCAACGTTGCAGCTGGAGCT 10 20 30 40 50 60 70 80 90 100 110 120 b17727 AATCCTGTTGAGCTGAACCGAGGCATCCTTGCGGCAGCTGATAAAGCCGTGGAGAAGCTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19351 AATCCTGTTGAGCTGAACCGAGGCATCCTTGCGGCAGCTGATAAAGCCGTGGAGAAGCTA 70 80 90 100 110 120 130 140 150 160 170 180 b17727 GGCGAGCGTGCAGCGGAAGTAGCCTCTGCCGCAGACATTGCCAACGTAGCCACTGTTTCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19351 GGCGAGCGTGCAGCGGAAGTAGCCTCTGCCGCAGACATTGCCAACGTAGCCACTGTTTCT 130 140 150 160 170 180 190 200 210 220 230 240 b17727 TCTCGCGATGCTGAGATCGGTGACATGGTCGCCGCAGCAATGGAAAAAGTGGGCAAGGAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19351 TCTCGCGATGCTGAGATCGGTGACATGGTCGCCGCAGCAATGGAAAAAGTGGGCAAGGAC 190 200 210 220 230 240 250 260 270 280 290 300 b17727 GGTGTGGTAACGGTTGAAGAGTCTCAGTCCATCGAGTCCTACCTTGATGTGACCGAAGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19351 GGTGTGGTAACGGTTGAAGAGTCTCAGTCCATCGAGTCCTACCTTGATGTGACCGAAGGA 250 260 270 280 290 300 310 320 330 340 350 360 b17727 GTGTCCTTTGACAAGGGCTACCTATCTCCGTACTTCATCACCGACACCGACTCTCAACGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19351 GTGTCCTTTGACAAGGGCTACCTATCTCCGTACTTCATCACCGACACCGACTCTCAACGA 310 320 330 340 350 360 370 380 390 400 410 420 b17727 GCCGAGCTAGATGATCCGTACATTCTCCTCGTACGGAATAAGATCTCCTCGCTGCCGGAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19351 GCCGAGCTAGATGATCCGTACATTCTCCTCGTACGGAATAAGATCTCCTCGCTGCCGGAC 370 380 390 400 410 420 430 440 450 460 470 480 b17727 TTCCTGCCTTTGCTGGAAAAGACAGTCGAAGCGAACAAGCCGGTTCTTATCATCGCGGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19351 TTCCTGCCTTTGCTGGAAAAGACAGTCGAAGCGAACAAGCCGGTTCTTATCATCGCGGAA 430 440 450 460 470 480 490 500 510 520 530 540 b17727 GACGTAGAGGGTGAGCCTCTGCAGACTCTCGTGGTGAACTCCATCCGGAAGACGCTGCGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19351 GACGTAGAGGGTGAGCCTCTGCAGACTCTCGTGGTGAACTCCATCCGGAAGACGCTGCGC 490 500 510 520 530 540 550 b17727 GCTGTTGCCGTG :::::::::::: b19351 GCTGTTGCCGTG 550


>>b21146 NC_017462 Corynebacterium pseudotuberculosis 26  (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 125.2  bits: 33.0 E(): 0.69
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b17727 GCAACGCTGCTGGCCCAAGCAGTTATTACAGAGGGCTTGCGCAACGTTGCAGCTGGAGCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b21146 GCAACGCTGCTGGCCCAAGCAGTTATTACAGAGGGCTTGCGCAACGTTGCAGCTGGAGCT 10 20 30 40 50 60 70 80 90 100 110 120 b17727 AATCCTGTTGAGCTGAACCGAGGCATCCTTGCGGCAGCTGATAAAGCCGTGGAGAAGCTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b21146 AATCCTGTTGAGCTGAACCGAGGCATCCTTGCGGCAGCTGATAAAGCCGTGGAGAAGCTA 70 80 90 100 110 120 130 140 150 160 170 180 b17727 GGCGAGCGTGCAGCGGAAGTAGCCTCTGCCGCAGACATTGCCAACGTAGCCACTGTTTCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b21146 GGCGAGCGTGCAGCGGAAGTAGCCTCTGCCGCAGACATTGCCAACGTAGCCACTGTTTCT 130 140 150 160 170 180 190 200 210 220 230 240 b17727 TCTCGCGATGCTGAGATCGGTGACATGGTCGCCGCAGCAATGGAAAAAGTGGGCAAGGAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b21146 TCTCGCGATGCTGAGATCGGTGACATGGTCGCCGCAGCAATGGAAAAAGTGGGCAAGGAC 190 200 210 220 230 240 250 260 270 280 290 300 b17727 GGTGTGGTAACGGTTGAAGAGTCTCAGTCCATCGAGTCCTACCTTGATGTGACCGAAGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b21146 GGTGTGGTAACGGTTGAAGAGTCTCAGTCCATCGAGTCCTACCTTGATGTGACCGAAGGA 250 260 270 280 290 300 310 320 330 340 350 360 b17727 GTGTCCTTTGACAAGGGCTACCTATCTCCGTACTTCATCACCGACACCGACTCTCAACGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b21146 GTGTCCTTTGACAAGGGCTACCTATCTCCGTACTTCATCACCGACACCGACTCTCAACGA 310 320 330 340 350 360 370 380 390 400 410 420 b17727 GCCGAGCTAGATGATCCGTACATTCTCCTCGTACGGAATAAGATCTCCTCGCTGCCGGAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b21146 GCCGAGCTAGATGATCCGTACATTCTCCTCGTACGGAATAAGATCTCCTCGCTGCCGGAC 370 380 390 400 410 420 430 440 450 460 470 480 b17727 TTCCTGCCTTTGCTGGAAAAGACAGTCGAAGCGAACAAGCCGGTTCTTATCATCGCGGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b21146 TTCCTGCCTTTGCTGGAAAAGACAGTCGAAGCGAACAAGCCGGTTCTTATCATCGCGGAA 430 440 450 460 470 480 490 500 510 520 530 540 b17727 GACGTAGAGGGTGAGCCTCTGCAGACTCTCGTGGTGAACTCCATCCGGAAGACGCTGCGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b21146 GACGTAGAGGGTGAGCCTCTGCAGACTCTCGTGGTGAACTCCATCCGGAAGACGCTGCGC 490 500 510 520 530 540 550 b17727 GCTGTTGCCGTG :::::::::::: b21146 GCTGTTGCCGTG 550


>>b17488 CP002097 Corynebacterium pseudotuberculosis FRC  (552 nt)
 initn: 2751 init1: 2751 opt: 2751  Z-score: 124.9  bits: 32.9 E(): 0.72
banded Smith-Waterman score: 2751; 99.8% identity (99.8% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b17727 GCAACGCTGCTGGCCCAAGCAGTTATTACAGAGGGCTTGCGCAACGTTGCAGCTGGAGCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::: b17488 GCAACGCTGCTGGCCCAAGCAGTTATTACAGAGGGCTTGCGCAACGTTGCAGCTGGGGCT 10 20 30 40 50 60 70 80 90 100 110 120 b17727 AATCCTGTTGAGCTGAACCGAGGCATCCTTGCGGCAGCTGATAAAGCCGTGGAGAAGCTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b17488 AATCCTGTTGAGCTGAACCGAGGCATCCTTGCGGCAGCTGATAAAGCCGTGGAGAAGCTA 70 80 90 100 110 120 130 140 150 160 170 180 b17727 GGCGAGCGTGCAGCGGAAGTAGCCTCTGCCGCAGACATTGCCAACGTAGCCACTGTTTCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b17488 GGCGAGCGTGCAGCGGAAGTAGCCTCTGCCGCAGACATTGCCAACGTAGCCACTGTTTCT 130 140 150 160 170 180 190 200 210 220 230 240 b17727 TCTCGCGATGCTGAGATCGGTGACATGGTCGCCGCAGCAATGGAAAAAGTGGGCAAGGAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b17488 TCTCGCGATGCTGAGATCGGTGACATGGTCGCCGCAGCAATGGAAAAAGTGGGCAAGGAC 190 200 210 220 230 240 250 260 270 280 290 300 b17727 GGTGTGGTAACGGTTGAAGAGTCTCAGTCCATCGAGTCCTACCTTGATGTGACCGAAGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b17488 GGTGTGGTAACGGTTGAAGAGTCTCAGTCCATCGAGTCCTACCTTGATGTGACCGAAGGA 250 260 270 280 290 300 310 320 330 340 350 360 b17727 GTGTCCTTTGACAAGGGCTACCTATCTCCGTACTTCATCACCGACACCGACTCTCAACGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b17488 GTGTCCTTTGACAAGGGCTACCTATCTCCGTACTTCATCACCGACACCGACTCTCAACGA 310 320 330 340 350 360 370 380 390 400 410 420 b17727 GCCGAGCTAGATGATCCGTACATTCTCCTCGTACGGAATAAGATCTCCTCGCTGCCGGAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b17488 GCCGAGCTAGATGATCCGTACATTCTCCTCGTACGGAATAAGATCTCCTCGCTGCCGGAC 370 380 390 400 410 420 430 440 450 460 470 480 b17727 TTCCTGCCTTTGCTGGAAAAGACAGTCGAAGCGAACAAGCCGGTTCTTATCATCGCGGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b17488 TTCCTGCCTTTGCTGGAAAAGACAGTCGAAGCGAACAAGCCGGTTCTTATCATCGCGGAA 430 440 450 460 470 480 490 500 510 520 530 540 b17727 GACGTAGAGGGTGAGCCTCTGCAGACTCTCGTGGTGAACTCCATCCGGAAGACGCTGCGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b17488 GACGTAGAGGGTGAGCCTCTGCAGACTCTCGTGGTGAACTCCATCCGGAAGACGCTGCGC 490 500 510 520 530 540 550 b17727 GCTGTTGCCGTG :::::::::::: b17488 GCTGTTGCCGTG 550


>>b7204 AY781285 Corynebacterium pseudotuberculosis T1    (552 nt)
 initn: 2751 init1: 2751 opt: 2751  Z-score: 124.9  bits: 32.9 E(): 0.72
banded Smith-Waterman score: 2751; 99.8% identity (99.8% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b17727 GCAACGCTGCTGGCCCAAGCAGTTATTACAGAGGGCTTGCGCAACGTTGCAGCTGGAGCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::: b7204 GCAACGCTGCTGGCCCAAGCAGTTATTACAGAGGGCTTGCGCAACGTTGCAGCTGGGGCT 10 20 30 40 50 60 70 80 90 100 110 120 b17727 AATCCTGTTGAGCTGAACCGAGGCATCCTTGCGGCAGCTGATAAAGCCGTGGAGAAGCTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b7204 AATCCTGTTGAGCTGAACCGAGGCATCCTTGCGGCAGCTGATAAAGCCGTGGAGAAGCTA 70 80 90 100 110 120 130 140 150 160 170 180 b17727 GGCGAGCGTGCAGCGGAAGTAGCCTCTGCCGCAGACATTGCCAACGTAGCCACTGTTTCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b7204 GGCGAGCGTGCAGCGGAAGTAGCCTCTGCCGCAGACATTGCCAACGTAGCCACTGTTTCT 130 140 150 160 170 180 190 200 210 220 230 240 b17727 TCTCGCGATGCTGAGATCGGTGACATGGTCGCCGCAGCAATGGAAAAAGTGGGCAAGGAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b7204 TCTCGCGATGCTGAGATCGGTGACATGGTCGCCGCAGCAATGGAAAAAGTGGGCAAGGAC 190 200 210 220 230 240 250 260 270 280 290 300 b17727 GGTGTGGTAACGGTTGAAGAGTCTCAGTCCATCGAGTCCTACCTTGATGTGACCGAAGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b7204 GGTGTGGTAACGGTTGAAGAGTCTCAGTCCATCGAGTCCTACCTTGATGTGACCGAAGGA 250 260 270 280 290 300 310 320 330 340 350 360 b17727 GTGTCCTTTGACAAGGGCTACCTATCTCCGTACTTCATCACCGACACCGACTCTCAACGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b7204 GTGTCCTTTGACAAGGGCTACCTATCTCCGTACTTCATCACCGACACCGACTCTCAACGA 310 320 330 340 350 360 370 380 390 400 410 420 b17727 GCCGAGCTAGATGATCCGTACATTCTCCTCGTACGGAATAAGATCTCCTCGCTGCCGGAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b7204 GCCGAGCTAGATGATCCGTACATTCTCCTCGTACGGAATAAGATCTCCTCGCTGCCGGAC 370 380 390 400 410 420 430 440 450 460 470 480 b17727 TTCCTGCCTTTGCTGGAAAAGACAGTCGAAGCGAACAAGCCGGTTCTTATCATCGCGGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b7204 TTCCTGCCTTTGCTGGAAAAGACAGTCGAAGCGAACAAGCCGGTTCTTATCATCGCGGAA 430 440 450 460 470 480 490 500 510 520 530 540 b17727 GACGTAGAGGGTGAGCCTCTGCAGACTCTCGTGGTGAACTCCATCCGGAAGACGCTGCGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b7204 GACGTAGAGGGTGAGCCTCTGCAGACTCTCGTGGTGAACTCCATCCGGAAGACGCTGCGC 490 500 510 520 530 540 550 b17727 GCTGTTGCCGTG :::::::::::: b7204 GCTGTTGCCGTG 550


>>b21136 NC_017945 Corynebacterium pseudotuberculosis 25  (552 nt)
 initn: 2742 init1: 2742 opt: 2742  Z-score: 124.6  bits: 32.8 E(): 0.75
banded Smith-Waterman score: 2742; 99.6% identity (99.6% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b17727 GCAACGCTGCTGGCCCAAGCAGTTATTACAGAGGGCTTGCGCAACGTTGCAGCTGGAGCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b21136 GCAACGCTGCTGGCCCAAGCAGTTATTACAGAGGGCTTGCGCAACGTTGCAGCTGGAGCT 10 20 30 40 50 60 70 80 90 100 110 120 b17727 AATCCTGTTGAGCTGAACCGAGGCATCCTTGCGGCAGCTGATAAAGCCGTGGAGAAGCTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b21136 AATCCTGTTGAGCTGAACCGAGGCATCCTTGCGGCAGCTGATAAAGCCGTGGAGAAGCTA 70 80 90 100 110 120 130 140 150 160 170 180 b17727 GGCGAGCGTGCAGCGGAAGTAGCCTCTGCCGCAGACATTGCCAACGTAGCCACTGTTTCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b21136 GGCGAGCGTGCAGCGGAAGTAGCCTCTGCCGCAGACATTGCCAACGTAGCCACTGTTTCT 130 140 150 160 170 180 190 200 210 220 230 240 b17727 TCTCGCGATGCTGAGATCGGTGACATGGTCGCCGCAGCAATGGAAAAAGTGGGCAAGGAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b21136 TCTCGCGATGCTGAGATCGGTGACATGGTCGCCGCAGCAATGGAAAAAGTGGGCAAGGAC 190 200 210 220 230 240 250 260 270 280 290 300 b17727 GGTGTGGTAACGGTTGAAGAGTCTCAGTCCATCGAGTCCTACCTTGATGTGACCGAAGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b21136 GGTGTGGTAACGGTTGAAGAGTCTCAGTCCATCGAGTCCTACCTTGATGTGACCGAAGGA 250 260 270 280 290 300 310 320 330 340 350 360 b17727 GTGTCCTTTGACAAGGGCTACCTATCTCCGTACTTCATCACCGACACCGACTCTCAACGA ::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::: b21136 GTGTCCTTTGACAAGGGATACCTATCTCCGTACTTCATCACCGACACCGACTCTCAACGA 310 320 330 340 350 360 370 380 390 400 410 420 b17727 GCCGAGCTAGATGATCCGTACATTCTCCTCGTACGGAATAAGATCTCCTCGCTGCCGGAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b21136 GCCGAGCTAGATGATCCGTACATTCTCCTCGTACGGAATAAGATCTCCTCGCTGCCGGAC 370 380 390 400 410 420 430 440 450 460 470 480 b17727 TTCCTGCCTTTGCTGGAAAAGACAGTCGAAGCGAACAAGCCGGTTCTTATCATCGCGGAA ::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::: b21136 TTCCTGCCTTTGCTGGAAAAGACGGTCGAAGCGAACAAGCCGGTTCTTATCATCGCGGAA 430 440 450 460 470 480 490 500 510 520 530 540 b17727 GACGTAGAGGGTGAGCCTCTGCAGACTCTCGTGGTGAACTCCATCCGGAAGACGCTGCGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b21136 GACGTAGAGGGTGAGCCTCTGCAGACTCTCGTGGTGAACTCCATCCGGAAGACGCTGCGC 490 500 510 520 530 540 550 b17727 GCTGTTGCCGTG :::::::::::: b21136 GCTGTTGCCGTG 550


>>b19681 CP003061 Corynebacterium pseudotuberculosis CIP  (552 nt)
 initn: 2742 init1: 2742 opt: 2742  Z-score: 124.6  bits: 32.8 E(): 0.75
banded Smith-Waterman score: 2742; 99.6% identity (99.6% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b17727 GCAACGCTGCTGGCCCAAGCAGTTATTACAGAGGGCTTGCGCAACGTTGCAGCTGGAGCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19681 GCAACGCTGCTGGCCCAAGCAGTTATTACAGAGGGCTTGCGCAACGTTGCAGCTGGAGCT 10 20 30 40 50 60 70 80 90 100 110 120 b17727 AATCCTGTTGAGCTGAACCGAGGCATCCTTGCGGCAGCTGATAAAGCCGTGGAGAAGCTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19681 AATCCTGTTGAGCTGAACCGAGGCATCCTTGCGGCAGCTGATAAAGCCGTGGAGAAGCTA 70 80 90 100 110 120 130 140 150 160 170 180 b17727 GGCGAGCGTGCAGCGGAAGTAGCCTCTGCCGCAGACATTGCCAACGTAGCCACTGTTTCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19681 GGCGAGCGTGCAGCGGAAGTAGCCTCTGCCGCAGACATTGCCAACGTAGCCACTGTTTCT 130 140 150 160 170 180 190 200 210 220 230 240 b17727 TCTCGCGATGCTGAGATCGGTGACATGGTCGCCGCAGCAATGGAAAAAGTGGGCAAGGAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19681 TCTCGCGATGCTGAGATCGGTGACATGGTCGCCGCAGCAATGGAAAAAGTGGGCAAGGAC 190 200 210 220 230 240 250 260 270 280 290 300 b17727 GGTGTGGTAACGGTTGAAGAGTCTCAGTCCATCGAGTCCTACCTTGATGTGACCGAAGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19681 GGTGTGGTAACGGTTGAAGAGTCTCAGTCCATCGAGTCCTACCTTGATGTGACCGAAGGA 250 260 270 280 290 300 310 320 330 340 350 360 b17727 GTGTCCTTTGACAAGGGCTACCTATCTCCGTACTTCATCACCGACACCGACTCTCAACGA ::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::: b19681 GTGTCCTTTGACAAGGGATACCTATCTCCGTACTTCATCACCGACACCGACTCTCAACGA 310 320 330 340 350 360 370 380 390 400 410 420 b17727 GCCGAGCTAGATGATCCGTACATTCTCCTCGTACGGAATAAGATCTCCTCGCTGCCGGAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19681 GCCGAGCTAGATGATCCGTACATTCTCCTCGTACGGAATAAGATCTCCTCGCTGCCGGAC 370 380 390 400 410 420 430 440 450 460 470 480 b17727 TTCCTGCCTTTGCTGGAAAAGACAGTCGAAGCGAACAAGCCGGTTCTTATCATCGCGGAA ::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::: b19681 TTCCTGCCTTTGCTGGAAAAGACGGTCGAAGCGAACAAGCCGGTTCTTATCATCGCGGAA 430 440 450 460 470 480 490 500 510 520 530 540 b17727 GACGTAGAGGGTGAGCCTCTGCAGACTCTCGTGGTGAACTCCATCCGGAAGACGCTGCGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b19681 GACGTAGAGGGTGAGCCTCTGCAGACTCTCGTGGTGAACTCCATCCGGAAGACGCTGCGC 490 500 510 520 530 540 550 b17727 GCTGTTGCCGTG :::::::::::: b19681 GCTGTTGCCGTG 550


>>b21006 NC_018019 Corynebacterium pseudotuberculosis Cp  (552 nt)
 initn: 2742 init1: 2742 opt: 2742  Z-score: 124.6  bits: 32.8 E(): 0.75
banded Smith-Waterman score: 2742; 99.6% identity (99.6% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b17727 GCAACGCTGCTGGCCCAAGCAGTTATTACAGAGGGCTTGCGCAACGTTGCAGCTGGAGCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b21006 GCAACGCTGCTGGCCCAAGCAGTTATTACAGAGGGCTTGCGCAACGTTGCAGCTGGAGCT 10 20 30 40 50 60 70 80 90 100 110 120 b17727 AATCCTGTTGAGCTGAACCGAGGCATCCTTGCGGCAGCTGATAAAGCCGTGGAGAAGCTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b21006 AATCCTGTTGAGCTGAACCGAGGCATCCTTGCGGCAGCTGATAAAGCCGTGGAGAAGCTA 70 80 90 100 110 120 130 140 150 160 170 180 b17727 GGCGAGCGTGCAGCGGAAGTAGCCTCTGCCGCAGACATTGCCAACGTAGCCACTGTTTCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b21006 GGCGAGCGTGCAGCGGAAGTAGCCTCTGCCGCAGACATTGCCAACGTAGCCACTGTTTCT 130 140 150 160 170 180 190 200 210 220 230 240 b17727 TCTCGCGATGCTGAGATCGGTGACATGGTCGCCGCAGCAATGGAAAAAGTGGGCAAGGAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b21006 TCTCGCGATGCTGAGATCGGTGACATGGTCGCCGCAGCAATGGAAAAAGTGGGCAAGGAC 190 200 210 220 230 240 250 260 270 280 290 300 b17727 GGTGTGGTAACGGTTGAAGAGTCTCAGTCCATCGAGTCCTACCTTGATGTGACCGAAGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b21006 GGTGTGGTAACGGTTGAAGAGTCTCAGTCCATCGAGTCCTACCTTGATGTGACCGAAGGA 250 260 270 280 290 300 310 320 330 340 350 360 b17727 GTGTCCTTTGACAAGGGCTACCTATCTCCGTACTTCATCACCGACACCGACTCTCAACGA ::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::: b21006 GTGTCCTTTGACAAGGGATACCTATCTCCGTACTTCATCACCGACACCGACTCTCAACGA 310 320 330 340 350 360 370 380 390 400 410 420 b17727 GCCGAGCTAGATGATCCGTACATTCTCCTCGTACGGAATAAGATCTCCTCGCTGCCGGAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b21006 GCCGAGCTAGATGATCCGTACATTCTCCTCGTACGGAATAAGATCTCCTCGCTGCCGGAC 370 380 390 400 410 420 430 440 450 460 470 480 b17727 TTCCTGCCTTTGCTGGAAAAGACAGTCGAAGCGAACAAGCCGGTTCTTATCATCGCGGAA ::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::: b21006 TTCCTGCCTTTGCTGGAAAAGACGGTCGAAGCGAACAAGCCGGTTCTTATCATCGCGGAA 430 440 450 460 470 480 490 500 510 520 530 540 b17727 GACGTAGAGGGTGAGCCTCTGCAGACTCTCGTGGTGAACTCCATCCGGAAGACGCTGCGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b21006 GACGTAGAGGGTGAGCCTCTGCAGACTCTCGTGGTGAACTCCATCCGGAAGACGCTGCGC 490 500 510 520 530 540 550 b17727 GCTGTTGCCGTG :::::::::::: b21006 GCTGTTGCCGTG 550


>>b22728 NC_016932 Corynebacterium pseudotuberculosis 31  (552 nt)
 initn: 2742 init1: 2742 opt: 2742  Z-score: 124.6  bits: 32.8 E(): 0.75
banded Smith-Waterman score: 2742; 99.6% identity (99.6% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b17727 GCAACGCTGCTGGCCCAAGCAGTTATTACAGAGGGCTTGCGCAACGTTGCAGCTGGAGCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b22728 GCAACGCTGCTGGCCCAAGCAGTTATTACAGAGGGCTTGCGCAACGTTGCAGCTGGAGCT 10 20 30 40 50 60 70 80 90 100 110 120 b17727 AATCCTGTTGAGCTGAACCGAGGCATCCTTGCGGCAGCTGATAAAGCCGTGGAGAAGCTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b22728 AATCCTGTTGAGCTGAACCGAGGCATCCTTGCGGCAGCTGATAAAGCCGTGGAGAAGCTA 70 80 90 100 110 120 130 140 150 160 170 180 b17727 GGCGAGCGTGCAGCGGAAGTAGCCTCTGCCGCAGACATTGCCAACGTAGCCACTGTTTCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b22728 GGCGAGCGTGCAGCGGAAGTAGCCTCTGCCGCAGACATTGCCAACGTAGCCACTGTTTCT 130 140 150 160 170 180 190 200 210 220 230 240 b17727 TCTCGCGATGCTGAGATCGGTGACATGGTCGCCGCAGCAATGGAAAAAGTGGGCAAGGAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b22728 TCTCGCGATGCTGAGATCGGTGACATGGTCGCCGCAGCAATGGAAAAAGTGGGCAAGGAC 190 200 210 220 230 240 250 260 270 280 290 300 b17727 GGTGTGGTAACGGTTGAAGAGTCTCAGTCCATCGAGTCCTACCTTGATGTGACCGAAGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b22728 GGTGTGGTAACGGTTGAAGAGTCTCAGTCCATCGAGTCCTACCTTGATGTGACCGAAGGA 250 260 270 280 290 300 310 320 330 340 350 360 b17727 GTGTCCTTTGACAAGGGCTACCTATCTCCGTACTTCATCACCGACACCGACTCTCAACGA ::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::: b22728 GTGTCCTTTGACAAGGGATACCTATCTCCGTACTTCATCACCGACACCGACTCTCAACGA 310 320 330 340 350 360 370 380 390 400 410 420 b17727 GCCGAGCTAGATGATCCGTACATTCTCCTCGTACGGAATAAGATCTCCTCGCTGCCGGAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b22728 GCCGAGCTAGATGATCCGTACATTCTCCTCGTACGGAATAAGATCTCCTCGCTGCCGGAC 370 380 390 400 410 420 430 440 450 460 470 480 b17727 TTCCTGCCTTTGCTGGAAAAGACAGTCGAAGCGAACAAGCCGGTTCTTATCATCGCGGAA ::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::: b22728 TTCCTGCCTTTGCTGGAAAAGACGGTCGAAGCGAACAAGCCGGTTCTTATCATCGCGGAA 430 440 450 460 470 480 490 500 510 520 530 540 b17727 GACGTAGAGGGTGAGCCTCTGCAGACTCTCGTGGTGAACTCCATCCGGAAGACGCTGCGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b22728 GACGTAGAGGGTGAGCCTCTGCAGACTCTCGTGGTGAACTCCATCCGGAAGACGCTGCGC 490 500 510 520 530 540 550 b17727 GCTGTTGCCGTG :::::::::::: b22728 GCTGTTGCCGTG 550


>>b20627 NC_017730 Corynebacterium pseudotuberculosis 31  (552 nt)
 initn: 2733 init1: 2733 opt: 2733  Z-score: 124.3  bits: 32.8 E(): 0.78
banded Smith-Waterman score: 2733; 99.5% identity (99.5% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b17727 GCAACGCTGCTGGCCCAAGCAGTTATTACAGAGGGCTTGCGCAACGTTGCAGCTGGAGCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b20627 GCAACGCTGCTGGCCCAAGCAGTTATTACAGAGGGCTTGCGCAACGTTGCAGCTGGAGCT 10 20 30 40 50 60 70 80 90 100 110 120 b17727 AATCCTGTTGAGCTGAACCGAGGCATCCTTGCGGCAGCTGATAAAGCCGTGGAGAAGCTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b20627 AATCCTGTTGAGCTGAACCGAGGCATCCTTGCGGCAGCTGATAAAGCCGTGGAGAAGCTA 70 80 90 100 110 120 130 140 150 160 170 180 b17727 GGCGAGCGTGCAGCGGAAGTAGCCTCTGCCGCAGACATTGCCAACGTAGCCACTGTTTCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b20627 GGCGAGCGTGCAGCGGAAGTAGCCTCTGCCGCAGACATTGCCAACGTAGCCACTGTTTCT 130 140 150 160 170 180 190 200 210 220 230 240 b17727 TCTCGCGATGCTGAGATCGGTGACATGGTCGCCGCAGCAATGGAAAAAGTGGGCAAGGAC ::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::: b20627 TCTCGCGATGCTGAGATCGGTGACATGGTCGCCGCAGCAATCGAAAAAGTGGGCAAGGAC 190 200 210 220 230 240 250 260 270 280 290 300 b17727 GGTGTGGTAACGGTTGAAGAGTCTCAGTCCATCGAGTCCTACCTTGATGTGACCGAAGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b20627 GGTGTGGTAACGGTTGAAGAGTCTCAGTCCATCGAGTCCTACCTTGATGTGACCGAAGGA 250 260 270 280 290 300 310 320 330 340 350 360 b17727 GTGTCCTTTGACAAGGGCTACCTATCTCCGTACTTCATCACCGACACCGACTCTCAACGA ::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::: b20627 GTGTCCTTTGACAAGGGATACCTATCTCCGTACTTCATCACCGACACCGACTCTCAACGA 310 320 330 340 350 360 370 380 390 400 410 420 b17727 GCCGAGCTAGATGATCCGTACATTCTCCTCGTACGGAATAAGATCTCCTCGCTGCCGGAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b20627 GCCGAGCTAGATGATCCGTACATTCTCCTCGTACGGAATAAGATCTCCTCGCTGCCGGAC 370 380 390 400 410 420 430 440 450 460 470 480 b17727 TTCCTGCCTTTGCTGGAAAAGACAGTCGAAGCGAACAAGCCGGTTCTTATCATCGCGGAA ::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::: b20627 TTCCTGCCTTTGCTGGAAAAGACGGTCGAAGCGAACAAGCCGGTTCTTATCATCGCGGAA 430 440 450 460 470 480 490 500 510 520 530 540 b17727 GACGTAGAGGGTGAGCCTCTGCAGACTCTCGTGGTGAACTCCATCCGGAAGACGCTGCGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: b20627 GACGTAGAGGGTGAGCCTCTGCAGACTCTCGTGGTGAACTCCATCCGGAAGACGCTGCGC 490 500 510 520 530 540 550 b17727 GCTGTTGCCGTG :::::::::::: b20627 GCTGTTGCCGTG 550


>>b27804 NC_018101 Corynebacterium  ulcerans  0102        (552 nt)
 initn: 2185 init1: 2185 opt: 2256  Z-score: 107.4  bits: 29.7 E():  6.7
banded Smith-Waterman score: 2256; 89.9% identity (89.9% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b17727 GCAACGCTGCTGGCCCAAGCAGTTATTACAGAGGGCTTGCGCAACGTTGCAGCTGGAGCT ::::: :: ::::: :: :::::::: ::::::::::::::::: ::::: ::::::::: b27804 GCAACACTACTGGCGCAGGCAGTTATCACAGAGGGCTTGCGCAATGTTGCCGCTGGAGCT 10 20 30 40 50 60 70 80 90 100 110 120 b17727 AATCCTGTTGAGCTGAACCGAGGCATCCTTGCGGCAGCTGATAAAGCCGTGGAGAAGCTA :: :: :: ::::::::::: ::::::::::::::::::::::: :: ::::::::::: b27804 AACCCAGTCGAGCTGAACCGTGGCATCCTTGCGGCAGCTGATAAGGCTGTGGAGAAGCTT 70 80 90 100 110 120 130 140 150 160 170 180 b17727 GGCGAGCGTGCAGCGGAAGTAGCCTCTGCCGCAGACATTGCCAACGTAGCCACTGTTTCT : :::::::: :: :::::::: ::::: :: ::::: :: ::::::::::: :: ::: b27804 CGTGAGCGTGCGGCAGAAGTAGCGTCTGCTGCGGACATCGCTAACGTAGCCACCGTGTCT 130 140 150 160 170 180 190 200 210 220 230 240 b17727 TCTCGCGATGCTGAGATCGGTGACATGGTCGCCGCAGCAATGGAAAAAGTGGGCAAGGAC :::::::: :::::::: :: ::::::::::: ::::: ::::::::::::::::: :: b27804 TCTCGCGACGCTGAGATTGGCGACATGGTCGCTGCAGCGATGGAAAAAGTGGGCAAAGAT 190 200 210 220 230 240 250 260 270 280 290 300 b17727 GGTGTGGTAACGGTTGAAGAGTCTCAGTCCATCGAGTCCTACCTTGATGTGACCGAAGGA :: :: :::::::: :: ::::: ::::::::::::::::: ::::::::::::::::: b27804 GGCGTAGTAACGGTCGAGGAGTCCCAGTCCATCGAGTCCTATCTTGATGTGACCGAAGGC 250 260 270 280 290 300 310 320 330 340 350 360 b17727 GTGTCCTTTGACAAGGGCTACCTATCTCCGTACTTCATCACCGACACCGACTCTCAACGA ::::::::::::::::::::::: :: :::::::::::::::::::::::::: ::::: b27804 GTGTCCTTTGACAAGGGCTACCTGTCCCCGTACTTCATCACCGACACCGACTCCCAACGC 310 320 330 340 350 360 370 380 390 400 410 420 b17727 GCCGAGCTAGATGATCCGTACATTCTCCTCGTACGGAATAAGATCTCCTCGCTGCCGGAC :: ::::: ::::: ::::::::::: ::::::::::::::::::::::::::::: :: b27804 GCTGAGCTCGATGACCCGTACATTCTTCTCGTACGGAATAAGATCTCCTCGCTGCCAGAT 370 380 390 400 410 420 430 440 450 460 470 480 b17727 TTCCTGCCTTTGCTGGAAAAGACAGTCGAAGCGAACAAGCCGGTTCTTATCATCGCGGAA :::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::: b27804 TTCCTGCCTTTGCTGGAAAAGACAGTCGAAGCAAACAAGCCGGTTCTTATCATCGCGGAA 430 440 450 460 470 480 490 500 510 520 530 540 b17727 GACGTAGAGGGTGAGCCTCTGCAGACTCTCGTGGTGAACTCCATCCGGAAGACGCTGCGC ::::::::::: ::::: :::::::::::::::::::::::::: :::::::: :::::: b27804 GACGTAGAGGGCGAGCCCCTGCAGACTCTCGTGGTGAACTCCATTCGGAAGACCCTGCGC 490 500 510 520 530 540 550 b17727 GCTGTTGCCGTG ::::: :: ::: b27804 GCTGTGGCTGTG 550


>>b19074 CP002791 Corynebacterium ulcerans BR-AD22        (552 nt)
 initn: 2185 init1: 2185 opt: 2256  Z-score: 107.4  bits: 29.7 E():  6.7
banded Smith-Waterman score: 2256; 89.9% identity (89.9% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b17727 GCAACGCTGCTGGCCCAAGCAGTTATTACAGAGGGCTTGCGCAACGTTGCAGCTGGAGCT ::::: :: ::::: :: :::::::: ::::::::::::::::: ::::: ::::::::: b19074 GCAACACTACTGGCGCAGGCAGTTATCACAGAGGGCTTGCGCAATGTTGCCGCTGGAGCT 10 20 30 40 50 60 70 80 90 100 110 120 b17727 AATCCTGTTGAGCTGAACCGAGGCATCCTTGCGGCAGCTGATAAAGCCGTGGAGAAGCTA :: :: :: ::::::::::: :::::::::::::: :::::::: :: ::::::::::: b19074 AACCCAGTCGAGCTGAACCGTGGCATCCTTGCGGCGGCTGATAAGGCTGTGGAGAAGCTT 70 80 90 100 110 120 130 140 150 160 170 180 b17727 GGCGAGCGTGCAGCGGAAGTAGCCTCTGCCGCAGACATTGCCAACGTAGCCACTGTTTCT : :::::::: :: :::::::: ::::: :: ::::: :::::::::::::: :: ::: b19074 CGTGAGCGTGCGGCAGAAGTAGCGTCTGCTGCGGACATCGCCAACGTAGCCACCGTGTCT 130 140 150 160 170 180 190 200 210 220 230 240 b17727 TCTCGCGATGCTGAGATCGGTGACATGGTCGCCGCAGCAATGGAAAAAGTGGGCAAGGAC :::::::: :::::::: :: ::::::::::: ::::: ::::::::::::::::: :: b19074 TCTCGCGACGCTGAGATTGGCGACATGGTCGCTGCAGCGATGGAAAAAGTGGGCAAAGAT 190 200 210 220 230 240 250 260 270 280 290 300 b17727 GGTGTGGTAACGGTTGAAGAGTCTCAGTCCATCGAGTCCTACCTTGATGTGACCGAAGGA :: :: :::::::: :: ::::: ::::::::::::::::: ::::::::::::::::: b19074 GGCGTAGTAACGGTCGAGGAGTCCCAGTCCATCGAGTCCTATCTTGATGTGACCGAAGGC 250 260 270 280 290 300 310 320 330 340 350 360 b17727 GTGTCCTTTGACAAGGGCTACCTATCTCCGTACTTCATCACCGACACCGACTCTCAACGA ::::::::::::::::::::::: :: :::::::::::::::::::::::::: ::::: b19074 GTGTCCTTTGACAAGGGCTACCTGTCCCCGTACTTCATCACCGACACCGACTCCCAACGC 310 320 330 340 350 360 370 380 390 400 410 420 b17727 GCCGAGCTAGATGATCCGTACATTCTCCTCGTACGGAATAAGATCTCCTCGCTGCCGGAC :: ::::: ::::: ::::::::::: ::::::::::::::::::::::::::::: :: b19074 GCTGAGCTCGATGACCCGTACATTCTTCTCGTACGGAATAAGATCTCCTCGCTGCCAGAT 370 380 390 400 410 420 430 440 450 460 470 480 b17727 TTCCTGCCTTTGCTGGAAAAGACAGTCGAAGCGAACAAGCCGGTTCTTATCATCGCGGAA :::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::: b19074 TTCCTGCCTTTGCTGGAAAAGACAGTCGAAGCAAACAAGCCGGTTCTTATCATCGCGGAA 430 440 450 460 470 480 490 500 510 520 530 540 b17727 GACGTAGAGGGTGAGCCTCTGCAGACTCTCGTGGTGAACTCCATCCGGAAGACGCTGCGC ::::::::::: ::::: :::::::::::::::::::::::::: :::::::: :::::: b19074 GACGTAGAGGGCGAGCCCCTGCAGACTCTCGTGGTGAACTCCATTCGGAAGACCCTGCGC 490 500 510 520 530 540 550 b17727 GCTGTTGCCGTG ::::: :: ::: b19074 GCTGTGGCTGTG 550


>>b19076 CP002790 Corynebacterium ulcerans 809            (552 nt)
 initn: 2185 init1: 2185 opt: 2256  Z-score: 107.4  bits: 29.7 E():  6.7
banded Smith-Waterman score: 2256; 89.9% identity (89.9% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b17727 GCAACGCTGCTGGCCCAAGCAGTTATTACAGAGGGCTTGCGCAACGTTGCAGCTGGAGCT ::::: :: ::::: :: :::::::: ::::::::::::::::: ::::: ::::::::: b19076 GCAACACTACTGGCGCAGGCAGTTATCACAGAGGGCTTGCGCAATGTTGCCGCTGGAGCT 10 20 30 40 50 60 70 80 90 100 110 120 b17727 AATCCTGTTGAGCTGAACCGAGGCATCCTTGCGGCAGCTGATAAAGCCGTGGAGAAGCTA :: :: :: ::::::::::: :::::::::::::: :::::::: :: ::::::::::: b19076 AACCCAGTCGAGCTGAACCGTGGCATCCTTGCGGCGGCTGATAAGGCTGTGGAGAAGCTT 70 80 90 100 110 120 130 140 150 160 170 180 b17727 GGCGAGCGTGCAGCGGAAGTAGCCTCTGCCGCAGACATTGCCAACGTAGCCACTGTTTCT : :::::::: :: :::::::: ::::: :: ::::: :::::::::::::: :: ::: b19076 CGTGAGCGTGCCGCAGAAGTAGCGTCTGCTGCGGACATCGCCAACGTAGCCACCGTGTCT 130 140 150 160 170 180 190 200 210 220 230 240 b17727 TCTCGCGATGCTGAGATCGGTGACATGGTCGCCGCAGCAATGGAAAAAGTGGGCAAGGAC :::::::: :::::::: :: ::::::::::: ::::: ::::::::::::::::: :: b19076 TCTCGCGACGCTGAGATTGGCGACATGGTCGCTGCAGCGATGGAAAAAGTGGGCAAAGAT 190 200 210 220 230 240 250 260 270 280 290 300 b17727 GGTGTGGTAACGGTTGAAGAGTCTCAGTCCATCGAGTCCTACCTTGATGTGACCGAAGGA :: :: :::::::: :: ::::: ::::::::::::::::: ::::::::::::::::: b19076 GGCGTAGTAACGGTCGAGGAGTCCCAGTCCATCGAGTCCTATCTTGATGTGACCGAAGGC 250 260 270 280 290 300 310 320 330 340 350 360 b17727 GTGTCCTTTGACAAGGGCTACCTATCTCCGTACTTCATCACCGACACCGACTCTCAACGA ::::::::::::::::::::::: :: :::::::::::::::::::::::::: ::::: b19076 GTGTCCTTTGACAAGGGCTACCTGTCCCCGTACTTCATCACCGACACCGACTCCCAACGC 310 320 330 340 350 360 370 380 390 400 410 420 b17727 GCCGAGCTAGATGATCCGTACATTCTCCTCGTACGGAATAAGATCTCCTCGCTGCCGGAC :: ::::: ::::: ::::::::::: ::::::::::::::::::::::::::::: :: b19076 GCTGAGCTCGATGACCCGTACATTCTTCTCGTACGGAATAAGATCTCCTCGCTGCCAGAT 370 380 390 400 410 420 430 440 450 460 470 480 b17727 TTCCTGCCTTTGCTGGAAAAGACAGTCGAAGCGAACAAGCCGGTTCTTATCATCGCGGAA :::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::: b19076 TTCCTGCCTTTGCTGGAAAAGACAGTCGAAGCAAACAAGCCGGTTCTTATCATCGCGGAA 430 440 450 460 470 480 490 500 510 520 530 540 b17727 GACGTAGAGGGTGAGCCTCTGCAGACTCTCGTGGTGAACTCCATCCGGAAGACGCTGCGC ::::::::::: ::::: :::::::::::::::::::::::::: :::::::: :::::: b19076 GACGTAGAGGGCGAGCCCCTGCAGACTCTCGTGGTGAACTCCATTCGGAAGACCCTGCGC 490 500 510 520 530 540 550 b17727 GCTGTTGCCGTG ::::: :: ::: b19076 GCTGTGGCTGTG 550


>>b28302 AYUJ01000002 Corynebacterium  ulcerans  NCTC 12  (552 nt)
 initn: 2176 init1: 2176 opt: 2247  Z-score: 107.1  bits: 29.6 E():    7
banded Smith-Waterman score: 2247; 89.7% identity (89.7% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b17727 GCAACGCTGCTGGCCCAAGCAGTTATTACAGAGGGCTTGCGCAACGTTGCAGCTGGAGCT :: ::::: ::::: :: :::::::: :: ::::: ::::::::::::: ::::::::: b28302 GCGACGCTACTGGCACAGGCAGTTATCACTGAGGGACTGCGCAACGTTGCCGCTGGAGCT 10 20 30 40 50 60 70 80 90 100 110 120 b17727 AATCCTGTTGAGCTGAACCGAGGCATCCTTGCGGCAGCTGATAAAGCCGTGGAGAAGCTA :: :: :: :: :::::::: :: :::::::: :: ::::::::::::::::::::::: b28302 AACCCAGTCGAACTGAACCGTGGAATCCTTGCAGCGGCTGATAAAGCCGTGGAGAAGCTT 70 80 90 100 110 120 130 140 150 160 170 180 b17727 GGCGAGCGTGCAGCGGAAGTAGCCTCTGCCGCAGACATTGCCAACGTAGCCACTGTTTCT ::::::::::::: :::::::: ::::: :: ::::: ::::::::::: :: :: :: b28302 CGCGAGCGTGCAGCAGAAGTAGCTTCTGCTGCGGACATCGCCAACGTAGCTACCGTCTCC 130 140 150 160 170 180 190 200 210 220 230 240 b17727 TCTCGCGATGCTGAGATCGGTGACATGGTCGCCGCAGCAATGGAAAAAGTGGGCAAGGAC :: :: :: :::::::: :: ::::::::::: ::::: ::::::::::::::::::::: b28302 TCCCGTGACGCTGAGATTGGCGACATGGTCGCTGCAGCGATGGAAAAAGTGGGCAAGGAC 190 200 210 220 230 240 250 260 270 280 290 300 b17727 GGTGTGGTAACGGTTGAAGAGTCTCAGTCCATCGAGTCCTACCTTGATGTGACCGAAGGA :: :: ::::::::::::::::: ::::::::::::::::: :: :::::::::::::: b28302 GGCGTAGTAACGGTTGAAGAGTCCCAGTCCATCGAGTCCTATCTCGATGTGACCGAAGGC 250 260 270 280 290 300 310 320 330 340 350 360 b17727 GTGTCCTTTGACAAGGGCTACCTATCTCCGTACTTCATCACCGACACCGACTCTCAACGA ::::::::::::::::::::::: :: :::::::::::::: :::::::: ::::: :: b28302 GTGTCCTTTGACAAGGGCTACCTGTCCCCGTACTTCATCACTGACACCGATTCTCAGCGT 310 320 330 340 350 360 370 380 390 400 410 420 b17727 GCCGAGCTAGATGATCCGTACATTCTCCTCGTACGGAATAAGATCTCCTCGCTGCCGGAC :::::::: :::::::::::::: :: :::::::: :::::::::::::::::::::::: b28302 GCCGAGCTTGATGATCCGTACATCCTTCTCGTACGCAATAAGATCTCCTCGCTGCCGGAC 370 380 390 400 410 420 430 440 450 460 470 480 b17727 TTCCTGCCTTTGCTGGAAAAGACAGTCGAAGCGAACAAGCCGGTTCTTATCATCGCGGAA ::::::::::::::::::::::: :::::::: ::::::::::::::::::::::::::: b28302 TTCCTGCCTTTGCTGGAAAAGACCGTCGAAGCAAACAAGCCGGTTCTTATCATCGCGGAA 430 440 450 460 470 480 490 500 510 520 530 540 b17727 GACGTAGAGGGTGAGCCTCTGCAGACTCTCGTGGTGAACTCCATCCGGAAGACGCTGCGC ::::::::::: :::::::: ::::::::::::::::::::::::::::::::::::::: b28302 GACGTAGAGGGCGAGCCTCTACAGACTCTCGTGGTGAACTCCATCCGGAAGACGCTGCGC 490 500 510 520 530 540 550 b17727 GCTGTTGCCGTG ::::: :: ::: b28302 GCTGTGGCTGTG 550


>>b35811 NZ_SDQO02000002 Corynebacterium silvaticum KL01  (552 nt)
 initn: 2185 init1: 2185 opt: 2202  Z-score: 105.5  bits: 29.3 E():  8.6
banded Smith-Waterman score: 2202; 88.8% identity (88.8% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b17727 GCAACGCTGCTGGCCCAAGCAGTTATTACAGAGGGCTTGCGCAACGTTGCAGCTGGAGCT :::::::: ::::: :: :: ::::: ::::: ::::::::::: ::::: ::::::::: b35811 GCAACGCTACTGGCACAGGCTGTTATCACAGAAGGCTTGCGCAATGTTGCCGCTGGAGCT 10 20 30 40 50 60 70 80 90 100 110 120 b17727 AATCCTGTTGAGCTGAACCGAGGCATCCTTGCGGCAGCTGATAAAGCCGTGGAGAAGCTA ::::: :: ::::::::::: :::::::: ::::: :::::::: :::::::::::::: b35811 AATCCAGTCGAGCTGAACCGTGGCATCCTCGCGGCGGCTGATAAGGCCGTGGAGAAGCTT 70 80 90 100 110 120 130 140 150 160 170 180 b17727 GGCGAGCGTGCAGCGGAAGTAGCCTCTGCCGCAGACATTGCCAACGTAGCCACTGTTTCT : ::::::::::: :::::::: :: :: :: ::::: ::::::::::: :: :: :: b35811 CGTGAGCGTGCAGCAGAAGTAGCTTCCGCTGCGGACATCGCCAACGTAGCTACCGTGTCC 130 140 150 160 170 180 190 200 210 220 230 240 b17727 TCTCGCGATGCTGAGATCGGTGACATGGTCGCCGCAGCAATGGAAAAAGTGGGCAAGGAC :: :: :: :::::::: :: :::::::: :: ::::: :::::::: :::::::::::: b35811 TCCCGTGACGCTGAGATTGGCGACATGGTTGCTGCAGCGATGGAAAAGGTGGGCAAGGAC 190 200 210 220 230 240 250 260 270 280 290 300 b17727 GGTGTGGTAACGGTTGAAGAGTCTCAGTCCATCGAGTCCTACCTTGATGTGACCGAAGGA :: :: ::::: :: :::::::: ::::::::::::::::::::::::::::::::::: b35811 GGCGTAGTAACAGTCGAAGAGTCCCAGTCCATCGAGTCCTACCTTGATGTGACCGAAGGT 250 260 270 280 290 300 310 320 330 340 350 360 b17727 GTGTCCTTTGACAAGGGCTACCTATCTCCGTACTTCATCACCGACACCGACTCTCAACGA ::::::::::::::::::::: : :: ::::::::::::::::::::::: :: ::::: b35811 GTGTCCTTTGACAAGGGCTACTTGTCGCCGTACTTCATCACCGACACCGATTCCCAACGC 310 320 330 340 350 360 370 380 390 400 410 420 b17727 GCCGAGCTAGATGATCCGTACATTCTCCTCGTACGGAATAAGATCTCCTCGCTGCCGGAC :: ::::: ::::: :::::::: :: :: :: ::::: ::::::::::::::::::::: b35811 GCTGAGCTCGATGACCCGTACATCCTTCTTGTGCGGAACAAGATCTCCTCGCTGCCGGAC 370 380 390 400 410 420 430 440 450 460 470 480 b17727 TTCCTGCCTTTGCTGGAAAAGACAGTCGAAGCGAACAAGCCGGTTCTTATCATCGCGGAA :::::::: :::::::::::::::::::::: ::::::::::::::::::::::::::: b35811 TTCCTGCCGCTGCTGGAAAAGACAGTCGAAGCAAACAAGCCGGTTCTTATCATCGCGGAA 430 440 450 460 470 480 490 500 510 520 530 540 b17727 GACGTAGAGGGTGAGCCTCTGCAGACTCTCGTGGTGAACTCCATCCGGAAGACGCTGCGC ::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: b35811 GACGTAGAGGGCGAGCCTCTGCAGACTCTCGTGGTGAACTCCATCCGGAAGACGCTGCGC 490 500 510 520 530 540 550 b17727 GCTGTTGCCGTG ::::: :: ::: b35811 GCTGTGGCTGTG 550


>>b20549 CP003208 Corynebacterium diphtheriae INCA 402    (552 nt)
 initn: 1328 init1: 1328 opt: 1572  Z-score: 83.2  bits: 25.2 E(): 1.5e+02
banded Smith-Waterman score: 1572; 76.1% identity (76.1% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b17727 GCAACGCTGCTGGCCCAAGCAGTTATTACAGAGGGCTTGCGCAACGTTGCAGCTGGAGCT ::::: ::::: :: :: :: ::: : :: ::::: ::::::::::::: :: :: ::: b20549 GCAACCCTGCTCGCTCAGGCTGTTGTGACCGAGGGTCTGCGCAACGTTGCTGCAGGTGCT 10 20 30 40 50 60 70 80 90 100 110 120 b17727 AATCCTGTTGAGCTGAACCGAGGCATCCTTGCGGCAGCTGATAAAGCCGTGGAGAAGCTA :: ::: : ::::: ::::: :: ::: ::: : : :: : :: : ::::: b20549 AACCCTATCGAGCTCAACCGCGGTATCGCTGCTGGTTCCGAGTTCGTAGTAGGAAAGCTG 70 80 90 100 110 120 130 140 150 160 170 180 b17727 GGCGAGCGTGCAGCGGAAGTAGCCTCTGCCGCAGACATTGCCAACGTAGCCACTGTTTCT ::::::::::: : :: :: : :: :: :::::::: :: ::::: :: :: :::::: b20549 CGCGAGCGTGCAACCGATGTTTCTTCGGCTGCAGACATCGCTAACGTTGCTACCGTTTCT 130 140 150 160 170 180 190 200 210 220 230 240 b17727 TCTCGCGATGCTGAGATCGGTGACATGGTCGCCGCAGCAATGGAAAAAGTGGGCAAGGAC :: :: :: : ::: :::: :::::::: :: ::::: ::::::::::::::::: ::: b20549 TCGCGTGACCCAGAGGTCGGCGACATGGTGGCAGCAGCGATGGAAAAAGTGGGCAAAGAC 190 200 210 220 230 240 250 260 270 280 290 300 b17727 GGTGTGGTAACGGTTGAAGAGTCTCAGTCCATCGAGTCCTACCTTGATGTGACCGAAGGA ::::: :: :: ::::: ::::: :::::::::::::: ::::: ::::: ::::: :: b20549 GGTGTCGTCACCGTTGAGGAGTCACAGTCCATCGAGTCATACCTCGATGTCACCGAGGGT 250 260 270 280 290 300 310 320 330 340 350 360 b17727 GTGTCCTTTGACAAGGGCTACCTATCTCCGTACTTCATCACCGACACCGACTCTCAACGA :: :: ::::::::::::: ::: :: :: ::::::::::::::::: ::: : :: : b20549 GTCTCTTTTGACAAGGGCTTCCTGTCCCCATACTTCATCACCGACACTGACACCCAGCAC 310 320 330 340 350 360 370 380 390 400 410 420 b17727 GCCGAGCTAGATGATCCGTACATTCTCCTCGTACGGAATAAGATCTCCTCGCTGCCGGAC :: : ::: :: : :: :: :: :: :: :: :: ::::: ::::: ::::: ::: b20549 GCAGTGCTCGAACAGCCAGCTATCCTGCTGGTCCGCAACAAGATTTCCTCTCTGCCAGAC 370 380 390 400 410 420 430 440 450 460 470 480 b17727 TTCCTGCCTTTGCTGGAAAAGACAGTCGAAGCGAACAAGCCGGTTCTTATCATCGCGGAA ::::: :: :: :::::::: : : :: :: : :::::: : : ::::: :::::: b20549 TTCCTTCCAGTGTTGGAAAAGGCTCTTGAGGCAAGCAAGCCAATCTTGATCATTGCGGAA 430 440 450 460 470 480 490 500 510 520 530 540 b17727 GACGTAGAGGGTGAGCCTCTGCAGACTCTCGTGGTGAACTCCATCCGGAAGACGCTGCGC :: :: :: :::::::: :::::::: ::::: :: ::::: ::::: ::::: ::::: b20549 GATGTCGAAGGTGAGCCACTGCAGACACTCGTCGTCAACTCGATCCGTAAGACCCTGCGT 490 500 510 520 530 540 550 b17727 GCTGTTGCCGTG :: ::::: ::: b20549 GCGGTTGCTGTG 550


>>b27784 AUZN01000036 Corynebacterium  diphtheriae  DSM   (552 nt)
 initn: 1310 init1: 1310 opt: 1554  Z-score: 82.6  bits: 25.1 E(): 1.6e+02
banded Smith-Waterman score: 1554; 75.7% identity (75.7% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b17727 GCAACGCTGCTGGCCCAAGCAGTTATTACAGAGGGCTTGCGCAACGTTGCAGCTGGAGCT ::::: ::::: :: :: :: ::: : :: ::::: ::::::::::::: :: :: ::: b27784 GCAACCCTGCTCGCTCAGGCTGTTGTGACCGAGGGTCTGCGCAACGTTGCTGCAGGTGCT 10 20 30 40 50 60 70 80 90 100 110 120 b17727 AATCCTGTTGAGCTGAACCGAGGCATCCTTGCGGCAGCTGATAAAGCCGTGGAGAAGCTA :: ::: : ::::: ::::: :: ::: ::: : : :: : :: : ::::: b27784 AACCCTATCGAGCTCAACCGCGGTATCGCTGCTGGTTCCGAGTTCGTAGTAGGAAAGCTG 70 80 90 100 110 120 130 140 150 160 170 180 b17727 GGCGAGCGTGCAGCGGAAGTAGCCTCTGCCGCAGACATTGCCAACGTAGCCACTGTTTCT ::::::::::: : :: :: : :: :: :::::::: :: ::::: :: :: :::::: b27784 CGCGAGCGTGCAACCGATGTTTCTTCGGCTGCAGACATCGCTAACGTTGCTACCGTTTCT 130 140 150 160 170 180 190 200 210 220 230 240 b17727 TCTCGCGATGCTGAGATCGGTGACATGGTCGCCGCAGCAATGGAAAAAGTGGGCAAGGAC :: :: :: : ::: :::: :::::::: :: ::::: ::::::::::::::::: ::: b27784 TCGCGTGACCCAGAGGTCGGCGACATGGTGGCAGCAGCGATGGAAAAAGTGGGCAAAGAC 190 200 210 220 230 240 250 260 270 280 290 300 b17727 GGTGTGGTAACGGTTGAAGAGTCTCAGTCCATCGAGTCCTACCTTGATGTGACCGAAGGA :::::::: :: :: :: ::::: :: ::::::::::: ::::: ::::: ::::: :: b27784 GGTGTGGTCACTGTGGAGGAGTCGCAATCCATCGAGTCATACCTCGATGTCACCGAGGGT 250 260 270 280 290 300 310 320 330 340 350 360 b17727 GTGTCCTTTGACAAGGGCTACCTATCTCCGTACTTCATCACCGACACCGACTCTCAACGA :::::::: :: :: :::: ::: :: :: ::::::::::::::::: ::: : :: : b27784 GTGTCCTTCGATAAAGGCTTCCTGTCCCCATACTTCATCACCGACACTGACACCCAGCAC 310 320 330 340 350 360 370 380 390 400 410 420 b17727 GCCGAGCTAGATGATCCGTACATTCTCCTCGTACGGAATAAGATCTCCTCGCTGCCGGAC :: : ::: :: : :: :: :: :: :: :: :: ::::: ::::: ::::: ::: b27784 GCAGTGCTCGAACAGCCAGCTATCCTGCTGGTCCGCAACAAGATTTCCTCTCTGCCAGAC 370 380 390 400 410 420 430 440 450 460 470 480 b17727 TTCCTGCCTTTGCTGGAAAAGACAGTCGAAGCGAACAAGCCGGTTCTTATCATCGCGGAA ::::: :: :: :::::::: : : :: :: : :::::: : : ::::: :::::: b27784 TTCCTTCCAGTGTTGGAAAAGGCTCTTGAGGCAAGCAAGCCAATCTTGATCATTGCGGAA 430 440 450 460 470 480 490 500 510 520 530 540 b17727 GACGTAGAGGGTGAGCCTCTGCAGACTCTCGTGGTGAACTCCATCCGGAAGACGCTGCGC :: :: :: :::::::: :::::::: ::::: :: ::::: ::::: ::::: ::::: b27784 GATGTCGAAGGTGAGCCACTGCAGACACTCGTCGTCAACTCGATCCGTAAGACCCTGCGT 490 500 510 520 530 540 550 b17727 GCTGTTGCCGTG :: ::::: ::: b27784 GCGGTTGCTGTG 550


>>b20360 NC_016801 Corynebacterium diphtheriae C7         (552 nt)
 initn: 1310 init1: 1310 opt: 1554  Z-score: 82.6  bits: 25.1 E(): 1.6e+02
banded Smith-Waterman score: 1554; 75.7% identity (75.7% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b17727 GCAACGCTGCTGGCCCAAGCAGTTATTACAGAGGGCTTGCGCAACGTTGCAGCTGGAGCT ::::: ::::: :: :: :: ::: : :: ::::: ::::::::::::: :: :: ::: b20360 GCAACCCTGCTCGCTCAGGCTGTTGTGACCGAGGGTCTGCGCAACGTTGCTGCAGGTGCT 10 20 30 40 50 60 70 80 90 100 110 120 b17727 AATCCTGTTGAGCTGAACCGAGGCATCCTTGCGGCAGCTGATAAAGCCGTGGAGAAGCTA :: ::: : ::::: ::::: :: ::: ::: : : :: : :: : ::::: b20360 AACCCTATCGAGCTCAACCGCGGTATCGCTGCTGGTTCCGAGTTCGTAGTAGGAAAGCTG 70 80 90 100 110 120 130 140 150 160 170 180 b17727 GGCGAGCGTGCAGCGGAAGTAGCCTCTGCCGCAGACATTGCCAACGTAGCCACTGTTTCT ::::::::::: : :: :: : :: :: :::::::: :: ::::: :: :: :::::: b20360 CGCGAGCGTGCAACCGATGTTTCTTCGGCTGCAGACATCGCTAACGTTGCTACCGTTTCT 130 140 150 160 170 180 190 200 210 220 230 240 b17727 TCTCGCGATGCTGAGATCGGTGACATGGTCGCCGCAGCAATGGAAAAAGTGGGCAAGGAC :: :: :: : ::: :::: :::::::: :: ::::: ::::::::::::::::: ::: b20360 TCGCGTGACCCAGAGGTCGGCGACATGGTGGCAGCAGCGATGGAAAAAGTGGGCAAAGAC 190 200 210 220 230 240 250 260 270 280 290 300 b17727 GGTGTGGTAACGGTTGAAGAGTCTCAGTCCATCGAGTCCTACCTTGATGTGACCGAAGGA :::::::: :: :: :: ::::: :: ::::::::::: ::::: ::::: ::::: :: b20360 GGTGTGGTCACTGTGGAGGAGTCGCAATCCATCGAGTCATACCTCGATGTCACCGAGGGT 250 260 270 280 290 300 310 320 330 340 350 360 b17727 GTGTCCTTTGACAAGGGCTACCTATCTCCGTACTTCATCACCGACACCGACTCTCAACGA :::::::: :: :: :::: ::: :: :: ::::::::::::::::: ::: : :: : b20360 GTGTCCTTCGATAAAGGCTTCCTGTCCCCATACTTCATCACCGACACTGACACCCAGCAC 310 320 330 340 350 360 370 380 390 400 410 420 b17727 GCCGAGCTAGATGATCCGTACATTCTCCTCGTACGGAATAAGATCTCCTCGCTGCCGGAC :: : ::: :: : :: :: :: :: :: :: :: ::::: ::::: ::::: ::: b20360 GCAGTGCTCGAACAGCCAGCTATCCTGCTGGTCCGCAACAAGATTTCCTCTCTGCCAGAC 370 380 390 400 410 420 430 440 450 460 470 480 b17727 TTCCTGCCTTTGCTGGAAAAGACAGTCGAAGCGAACAAGCCGGTTCTTATCATCGCGGAA ::::: :: :: :::::::: : : :: :: : :::::: : : ::::: :::::: b20360 TTCCTTCCAGTGTTGGAAAAGGCTCTTGAGGCAAGCAAGCCAATCTTGATCATTGCGGAA 430 440 450 460 470 480 490 500 510 520 530 540 b17727 GACGTAGAGGGTGAGCCTCTGCAGACTCTCGTGGTGAACTCCATCCGGAAGACGCTGCGC :: :: :: :::::::: :::::::: ::::: :: ::::: ::::: ::::: ::::: b20360 GATGTCGAAGGTGAGCCACTGCAGACACTCGTCGTCAACTCGATCCGTAAGACCCTGCGT 490 500 510 520 530 540 550 b17727 GCTGTTGCCGTG :: ::::: ::: b20360 GCGGTTGCTGTG 550


>>b20369 NC_016785 Corynebacterium diphtheriae CDCE 8392  (552 nt)
 initn: 1301 init1: 1301 opt: 1545  Z-score: 82.3  bits: 25.0 E(): 1.7e+02
banded Smith-Waterman score: 1545; 75.5% identity (75.5% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b17727 GCAACGCTGCTGGCCCAAGCAGTTATTACAGAGGGCTTGCGCAACGTTGCAGCTGGAGCT ::::: ::::: :: :: :: ::: : :: ::::: ::::::::::::: :: :: ::: b20369 GCAACCCTGCTCGCTCAGGCTGTTGTGACCGAGGGTCTGCGCAACGTTGCTGCAGGTGCT 10 20 30 40 50 60 70 80 90 100 110 120 b17727 AATCCTGTTGAGCTGAACCGAGGCATCCTTGCGGCAGCTGATAAAGCCGTGGAGAAGCTA :: ::: : ::::: ::::: :: ::: :: : : :: : :: : ::::: b20369 AACCCTATCGAGCTCAACCGCGGTATCGCAGCCGGTTCCGAGTTCGTAGTAGGAAAGCTG 70 80 90 100 110 120 130 140 150 160 170 180 b17727 GGCGAGCGTGCAGCGGAAGTAGCCTCTGCCGCAGACATTGCCAACGTAGCCACTGTTTCT ::::::::::: : :: :: : :: :: :::::::: :: ::::: :: :: :::::: b20369 CGCGAGCGTGCAACCGATGTTTCTTCGGCTGCAGACATCGCTAACGTTGCTACCGTTTCT 130 140 150 160 170 180 190 200 210 220 230 240 b17727 TCTCGCGATGCTGAGATCGGTGACATGGTCGCCGCAGCAATGGAAAAAGTGGGCAAGGAC :: :: :: : ::: :::: :::::::: :: ::::: ::::::::::::::::: ::: b20369 TCGCGTGACCCAGAGGTCGGCGACATGGTGGCAGCAGCGATGGAAAAAGTGGGCAAAGAC 190 200 210 220 230 240 250 260 270 280 290 300 b17727 GGTGTGGTAACGGTTGAAGAGTCTCAGTCCATCGAGTCCTACCTTGATGTGACCGAAGGA ::::: :: :: ::::: ::::: :::::::::::::: ::::: ::::: ::::: :: b20369 GGTGTCGTCACCGTTGAGGAGTCACAGTCCATCGAGTCATACCTCGATGTCACCGAGGGT 250 260 270 280 290 300 310 320 330 340 350 360 b17727 GTGTCCTTTGACAAGGGCTACCTATCTCCGTACTTCATCACCGACACCGACTCTCAACGA :: :: ::::::::::::: : : :: :: ::::::::::::::::: ::: : :: : b20369 GTCTCTTTTGACAAGGGCTTCTTGTCCCCATACTTCATCACCGACACTGACACCCAGCAC 310 320 330 340 350 360 370 380 390 400 410 420 b17727 GCCGAGCTAGATGATCCGTACATTCTCCTCGTACGGAATAAGATCTCCTCGCTGCCGGAC :: : ::: :: : :: :: :: :: :: :: :: ::::: ::::: ::::: ::: b20369 GCAGTGCTCGAACAGCCAGCTATCCTGCTGGTCCGCAACAAGATTTCCTCTCTGCCAGAC 370 380 390 400 410 420 430 440 450 460 470 480 b17727 TTCCTGCCTTTGCTGGAAAAGACAGTCGAAGCGAACAAGCCGGTTCTTATCATCGCGGAA ::::: :: :: :::::::: : : :: : : :::::: : : ::::: :::::: b20369 TTCCTTCCAGTGTTGGAAAAGGCTCTTGAGGAAAGCAAGCCAATCTTGATCATTGCGGAA 430 440 450 460 470 480 490 500 510 520 530 540 b17727 GACGTAGAGGGTGAGCCTCTGCAGACTCTCGTGGTGAACTCCATCCGGAAGACGCTGCGC :: :: :: :::::::: :::::::: ::::: :: ::::: ::::: ::::: ::::: b20369 GATGTCGAAGGTGAGCCACTGCAGACGCTCGTCGTCAACTCGATCCGTAAGACCCTGCGT 490 500 510 520 530 540 550 b17727 GCTGTTGCCGTG :: ::::: ::: b20369 GCGGTTGCTGTG 550


>>b20522 NC_016800 Corynebacterium diphtheriae BH8        (552 nt)
 initn: 1301 init1: 1301 opt: 1545  Z-score: 82.3  bits: 25.0 E(): 1.7e+02
banded Smith-Waterman score: 1545; 75.5% identity (75.5% similar) in 552 nt overlap (1-552:1-552)

10 20 30 40 50 60 b17727 GCAACGCTGCTGGCCCAAGCAGTTATTACAGAGGGCTTGCGCAACGTTGCAGCTGGAGCT ::::: ::::: :: :: :: ::: : :: ::::: ::::::::::::: :: :: ::: b20522 GCAACCCTGCTCGCTCAGGCTGTTGTGACCGAGGGTCTGCGCAACGTTGCTGCAGGTGCT 10 20 30 40 50 60 70 80 90 100 110 120 b17727 AATCCTGTTGAGCTGAACCGAGGCATCCTTGCGGCAGCTGATAAAGCCGTGGAGAAGCTA :: ::: : ::::: ::::: :: ::: :: : : :: : :: : ::::: b20522 AACCCTATCGAGCTCAACCGCGGTATCGCAGCCGGTTCCGAGTTCGTAGTAGGAAAGCTG 70 80 90 100 110 120 130 140 150 160 170 180 b17727 GGCGAGCGTGCAGCGGAAGTAGCCTCTGCCGCAGACATTGCCAACGTAGCCACTGTTTCT ::::::::::: : :: :: : :: :: :::::::: :: ::::: :: :: :::::: b20522 CGCGAGCGTGCAACCGATGTTTCTTCGGCTGCAGACATCGCTAACGTTGCTACCGTTTCT 130 140 150 160 170 180 190 200 210 220 230 240 b17727 TCTCGCGATGCTGAGATCGGTGACATGGTCGCCGCAGCAATGGAAAAAGTGGGCAAGGAC :: :: :: : ::: :::: :::::::: :: ::::: ::::::::::::::::: ::: b20522 TCGCGTGACCCAGAGGTCGGCGACATGGTGGCAGCAGCGATGGAAAAAGTGGGCAAAGAC 190 200 210 220 230 240 250 260 270 280 290 300 b17727 GGTGTGGTAACGGTTGAAGAGTCTCAGTCCATCGAGTCCTACCTTGATGTGACCGAAGGA ::::: :: :: ::::: ::::: :::::::::::::: ::::: ::::: ::::: :: b20522 GGTGTCGTCACCGTTGAGGAGTCACAGTCCATCGAGTCATACCTCGATGTCACCGAGGGT 250 260 270 280 290 300 310 320 330 340 350 360 b17727 GTGTCCTTTGACAAGGGCTACCTATCTCCGTACTTCATCACCGACACCGACTCTCAACGA :: :: ::::::::::::: : : :: :: ::::::::::::::::: ::: : :: : b20522 GTCTCTTTTGACAAGGGCTTCTTGTCCCCATACTTCATCACCGACACTGACACCCAGCAC 310 320 330 340 350 360 370 380 390 400 410 420 b17727 GCCGAGCTAGATGATCCGTACATTCTCCTCGTACGGAATAAGATCTCCTCGCTGCCGGAC :: : ::: :: : :: :: :: :: :: :: :: ::::: ::::: ::::: ::: b20522 GCAGTGCTCGAACAGCCAGCTATCCTGCTGGTCCGCAACAAGATTTCCTCTCTGCCAGAC 370 380 390 400 410 420 430 440 450 460 470 480 b17727 TTCCTGCCTTTGCTGGAAAAGACAGTCGAAGCGAACAAGCCGGTTCTTATCATCGCGGAA ::::: :: :: :::::::: : : :: : : :::::: : : ::::: :::::: b20522 TTCCTTCCAGTGTTGGAAAAGGCTCTTGAGGAAAGCAAGCCAATCTTGATCATTGCGGAA 430 440 450 460 470 480 490 500 510 520 530 540 b17727 GACGTAGAGGGTGAGCCTCTGCAGACTCTCGTGGTGAACTCCATCCGGAAGACGCTGCGC :: :: :: :::::::: :::::::: ::::: :: ::::: ::::: ::::: ::::: b20522 GATGTCGAAGGTGAGCCACTGCAGACGCTCGTCGTCAACTCGATCCGTAAGACCCTGCGT 490 500 510 520 530 540 550 b17727 GCTGTTGCCGTG :: ::::: ::: b20522 GCGGTTGCTGTG 550




552 residues in 1 query   sequences
10433008 residues in 18820 library sequences
 Scomplib [35.03]
 start: Mon Jul 22 04:30:10 2024 done: Mon Jul 22 04:30:12 2024
 Total Scan time:  2.200 Total Display time:  0.020

Function used was FASTA [version 35.03 Feb. 18, 2008]