/data/www/cpndb/fasta_results/b16820.fasta# /data/www/cpndb/fasta35 -E 200 -Q -m 6 -b 20 -d 20 -z 2 -H /data/www/cpndb/fasta_results/b16820 /data/www/cpndb/blastDBs/reference_a_nut
<pre>
FASTA searches a protein or DNA sequence data bank
 version 35.03 Feb. 18, 2008
Please cite:
 W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

</pre>
Query: /data/www/cpndb/fasta_results/b16820
<pre>
  1>>>b16820 558 nt - 558 nt
Library: /data/www/cpndb/blastDBs/reference_a_nut 10433008 residues in 18820 sequences

10433008 residues in 18820 sequences
Statistics: MLE_cen statistics: Lambda= 0.0039;  K=3.884e-05 (cen=941)
Algorithm: FASTA (3.5 Sept 2006) [optimized]
Parameters: +5/-4 matrix (5:-4) ktup: 6
 join: 51, opt: 36, open/ext: -12/-4, width:  16
 Scan time:  1.510
</pre>
<p>
<hr>
<p>
<p><pre>

The best scores are:                                      opt bits E(18820)
<a onClick="window.open('getRecord.php?id=b6848',
                                'cpndb_record'); return false;" href="getRecord.php?id=b6848" target=_"blank">b6848</a> AY691287 Prevotella ruminicola ATCC 1918 ( 558) [f] 2781 30.4       4 <A HREF="#b6848">align</A>
<a onClick="window.open('getRecord.php?id=b17625',
                                'cpndb_record'); return false;" href="getRecord.php?id=b17625" target=_"blank">b17625</a> AB547598 Prevotella copri JCM 13464     ( 558) [f] 1930 25.6 1.1e+02 <A HREF="#b17625">align</A>
<a onClick="window.open('getRecord.php?id=b14123',
                                'cpndb_record'); return false;" href="getRecord.php?id=b14123" target=_"blank">b14123</a> ACBX01000045 Prevotella copri DSM 18205 ( 558) [f] 1930 25.6 1.1e+02 <A HREF="#b14123">align</A>
<a onClick="window.open('getRecord.php?id=b33882',
                                'cpndb_record'); return false;" href="getRecord.php?id=b33882" target=_"blank">b33882</a> NZ_QSCI01000025 Prevotella  copri OF03- ( 558) [f] 1889 25.4 1.3e+02 <A HREF="#b33882">align</A>
<a onClick="window.open('getRecord.php?id=b30281',
                                'cpndb_record'); return false;" href="getRecord.php?id=b30281" target=_"blank">b30281</a> NZ_NMPZ01000014  Prevotella  copri  Ind ( 558) [f] 1880 25.3 1.4e+02 <A HREF="#b30281">align</A>
<a onClick="window.open('getRecord.php?id=b17633',
                                'cpndb_record'); return false;" href="getRecord.php?id=b17633" target=_"blank">b17633</a> AB547590 Prevotella albensis JCM 12258  ( 558) [f] 1831 25.0 1.7e+02 <A HREF="#b17633">align</A>
<a onClick="window.open('getRecord.php?id=b17591',
                                'cpndb_record'); return false;" href="getRecord.php?id=b17591" target=_"blank">b17591</a> AB547632 Prevotella stercorea JCM 13469 ( 558) [f] 1808 24.9 1.8e+02 <A HREF="#b17591">align</A>
<a onClick="window.open('getRecord.php?id=b20077',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20077" target=_"blank">b20077</a> AFZZ01000171 Prevotella stercorea DSM 1 ( 558) [f] 1808 24.9 1.8e+02 <A HREF="#b20077">align</A>
<a onClick="window.open('getRecord.php?id=b17615',
                                'cpndb_record'); return false;" href="getRecord.php?id=b17615" target=_"blank">b17615</a> AB547608 Prevotella intermedia JCM 1224 ( 558) [f] 1786 24.8   2e+02 <A HREF="#b17615">align</A>
<a onClick="window.open('getRecord.php?id=b17614',
                                'cpndb_record'); return false;" href="getRecord.php?id=b17614" target=_"blank">b17614</a> AB547609 Prevotella intermedia JCM 1115 ( 558) [f] 1786 24.8   2e+02 <A HREF="#b17614">align</A>
<a onClick="window.open('getRecord.php?id=b1027',
                                'cpndb_record'); return false;" href="getRecord.php?id=b1027" target=_"blank">b1027</a> AF440234 Prevotella intermedia ATCC 2561 ( 558) [f] 1786 24.8   2e+02 <A HREF="#b1027">align</A>
<a onClick="window.open('getRecord.php?id=b21143',
                                'cpndb_record'); return false;" href="getRecord.php?id=b21143" target=_"blank">b21143</a> NC_017861 Prevotella intermedia 17      ( 558) [f] 1768 24.7 2.1e+02 <A HREF="#b21143">align</A>
<a onClick="window.open('getRecord.php?id=b30104',
                                'cpndb_record'); return false;" href="getRecord.php?id=b30104" target=_"blank">b30104</a> NZ_FZNZ01000022  Prevotella  jejuni  DS ( 558) [f] 1746 24.6 2.3e+02 <A HREF="#b30104">align</A>
<a onClick="window.open('getRecord.php?id=b31098',
                                'cpndb_record'); return false;" href="getRecord.php?id=b31098" target=_"blank">b31098</a> NSLZ01000010 Prevotella intermedia WW85 ( 558) [f] 1741 24.5 2.4e+02 <A HREF="#b31098">align</A>
<a onClick="window.open('getRecord.php?id=b13603',
                                'cpndb_record'); return false;" href="getRecord.php?id=b13603" target=_"blank">b13603</a> AB480537 Prevotella falsenii JCM 15124  ( 558) [f] 1741 24.5 2.4e+02 <A HREF="#b13603">align</A>
<a onClick="window.open('getRecord.php?id=b28068',
                                'cpndb_record'); return false;" href="getRecord.php?id=b28068" target=_"blank">b28068</a> NZ_AWXC01000011 Prevotella  sp.  BV3P1  ( 558) [f] 1737 24.5 2.4e+02 <A HREF="#b28068">align</A>
<a onClick="window.open('getRecord.php?id=b16438',
                                'cpndb_record'); return false;" href="getRecord.php?id=b16438" target=_"blank">b16438</a> GG740022 Prevotella melaninogenica Oral ( 558) [f] 1728 24.5 2.5e+02 <A HREF="#b16438">align</A>
<a onClick="window.open('getRecord.php?id=b17607',
                                'cpndb_record'); return false;" href="getRecord.php?id=b17607" target=_"blank">b17607</a> AB547616 Prevotella melaninogenica JCM  ( 558) [f] 1728 24.5 2.5e+02 <A HREF="#b17607">align</A>
<a onClick="window.open('getRecord.php?id=b28410',
                                'cpndb_record'); return false;" href="getRecord.php?id=b28410" target=_"blank">b28410</a> JACD01000105 Prevotella  sp.  ICM33     ( 558) [f] 1728 24.5 2.5e+02 <A HREF="#b28410">align</A>
<a onClick="window.open('getRecord.php?id=b14417',
                                'cpndb_record'); return false;" href="getRecord.php?id=b14417" target=_"blank">b14417</a> CP002122 Prevotella melaninogenica ATCC ( 558) [f] 1728 24.5 2.5e+02 <A HREF="#b14417">align</A>
</pre><p><hr><p>

>>>b16820, 558 nt vs /data/www/cpndb/blastDBs/reference_a_nut library

<A name=b6848>
<pre>
>><a onClick="window.open('getRecord.php?id=b6848',
                                'cpndb_record'); return false;" href="getRecord.php?id=b6848" target=_"blank">b6848</a> AY691287 Prevotella ruminicola ATCC 19189         (558 nt)
 initn: 2781 init1: 2781 opt: 2781  Z-score: 111.4  bits: 30.4 E():    4
banded Smith-Waterman score: 2781; 99.8% identity (99.8% similar) in 558 nt overlap (1-558:1-558)
<p>

               10        20        30        40        50        60
b16820 GCTACCATCCTGGCTCAGGCTATCGTATCAGAGGGCTTGAAGAACGTTACCGCTGGTGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b6848  GCTACCATCCTGGCTCAGGCTATCGTATCAGAGGGCTTGAAGAACGTTACCGCTGGTGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b16820 AACCCCATGGACCTGAAGCGTGGTATCGACAAGGCTGTTAAGGCTGTTACTGAGCACATT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b6848  AACCCCATGGACCTGAAGCGTGGTATCGACAAGGCTGTTAAGGCTGTTACTGAGCACATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b16820 GCTAAGAGCGCCGAGCAGGTTGGCGACAACTACGATAAGATCGAGCAGGTAGCTACCGTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b6848  GCTAAGAGCGCCGAGCAGGTTGGCGACAACTACGATAAGATCGAGCAGGTAGCTACCGTA
              130       140       150       160       170       180

              190       200       210       220       230       240
b16820 TCTGCCAACAACGATAAGGAGATTGGTGAGCTGCTGGCCGAGGCTATGCGTAAGGTATCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b6848  TCTGCCAACAACGATAAGGAGATTGGTGAGCTGCTGGCCGAGGCTATGCGTAAGGTATCT
              190       200       210       220       230       240

              250       260       270       280       290       300
b16820 AAGGATGGTGTGATCACTATCGAGGAGAGCAAGAGCCGCGACACACACATTGGTGTAGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b6848  AAGGATGGTGTGATCACTATCGAGGAGAGCAAGAGCCGCGACACACACATTGGTGTAGTT
              250       260       270       280       290       300

              310       320       330       340       350       360
b16820 GAGGGTATGCAGTTCGATCGTGGTTACCTGTCAGCTTACTTCATCACCGATAGCGAGAAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b6848  GAGGGTATGCAGTTCGATCGTGGTTACCTGTCAGCTTACTTCATCACCGATAGCGAGAAG
              310       320       330       340       350       360

              370       380       390       400       410       420
b16820 ATGGAGTGCGTGATGGAGAACCCATACATCCTGATTTACGATAAGAAGATTTCAAACATC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b6848  ATGGAGTGCGTGATGGAGAACCCATACATCCTGATTTACGATAAGAAGATTTCAAACATC
              370       380       390       400       410       420

              430       440       450       460       470       480
b16820 AAGGATTTCCTGCCTATTTTGCAGCCTGCTGCCGAGAGCGGACGCCCCTTGCTGGTAATC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b6848  AAGGATTTCCTGCCTATTTTGCAGCCTGCTGCCGAGAGCGGACGCCCCTTGCTGGTAATC
              430       440       450       460       470       480

              490       500       510       520       530       540
b16820 GCCGAGGATGTTGATTCTGAGGCTCTTACCACACTGGTAGTAAACCGTCTGCGTGGTGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b6848  GCCGAGGATGTTGATTCTGAGGCTCTTACCACACTGGTAGTAAACCGTCTGCGTGGTGGT
              490       500       510       520       530       540

              550        
b16820 CTGAAGATCTGTGCTGTT
        :::::::::::::::::
b6848  GTGAAGATCTGTGCTGTT
              550        

</pre>
<hr>
<A name=b17625>
<pre>
>><a onClick="window.open('getRecord.php?id=b17625',
                                'cpndb_record'); return false;" href="getRecord.php?id=b17625" target=_"blank">b17625</a> AB547598 Prevotella copri JCM 13464              (558 nt)
 initn: 1882 init1: 1882 opt: 1930  Z-score: 85.3  bits: 25.6 E(): 1.1e+02
banded Smith-Waterman score: 1930; 82.9% identity (82.9% similar) in 557 nt overlap (1-557:1-557)
<p>

               10        20        30        40        50        60
b16820 GCTACCATCCTGGCTCAGGCTATCGTATCAGAGGGCTTGAAGAACGTTACCGCTGGTGCT
       ::::: :::::: :::::::::::::: :::::::::::::::::::::: :: ::::: 
b17625 GCTACTATCCTGACTCAGGCTATCGTAACAGAGGGCTTGAAGAACGTTACTGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b16820 AACCCCATGGACCTGAAGCGTGGTATCGACAAGGCTGTTAAGGCTGTTACTGAGCACATT
       ::::: :::::: ::::::::::::::::::::::::::   ::::::  ::    ::::
b17625 AACCCAATGGACTTGAAGCGTGGTATCGACAAGGCTGTTGCTGCTGTTGTTGCCTTCATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b16820 GCTAAGAGCGCCGAGCAGGTTGGCGACAACTACGATAAGATCGAGCAGGTAGCTACCGTA
           :    :: :::::::: : :::::::::::::::::: :::::::: ::::: :: 
b17625 AAGGAACATGCTGAGCAGGTAGACGACAACTACGATAAGATTGAGCAGGTGGCTACAGTT
              130       140       150       160       170       180

              190       200       210       220       230       240
b16820 TCTGCCAACAACGATAAGGAGATTGGTGAGCTGCTGGCCGAGGCTATGCGTAAGGTATCT
       :::::::::::::::   ::::::::: ::::  :::: :: :::::::: ::::: :::
b17625 TCTGCCAACAACGATGCAGAGATTGGTAAGCTCTTGGCTGACGCTATGCGCAAGGTTTCT
              190       200       210       220       230       240

              250       260       270       280       290       300
b16820 AAGGATGGTGTGATCACTATCGAGGAGAGCAAGAGCCGCGACACACACATTGGTGTAGTT
       ::::::::::: :::::::::::::::::::::::::: :: ::  :::: ::::: :::
b17625 AAGGATGGTGTCATCACTATCGAGGAGAGCAAGAGCCGTGATACCAACATCGGTGTTGTT
              250       260       270       280       290       300

              310       320       330       340       350       360
b16820 GAGGGTATGCAGTTCGATCGTGGTTACCTGTCAGCTTACTTCATCACCGATAGCGAGAAG
       :::::::::::::: :: ::::::::  ::   : ::::::::: :: :::  ::: :::
b17625 GAGGGTATGCAGTTTGACCGTGGTTATTTGAGCGGTTACTTCATGACTGATGCCGACAAG
              310       320       330       340       350       360

              370       380       390       400       410       420
b16820 ATGGAGTGCGTGATGGAGAACCCATACATCCTGATTTACGATAAGAAGATTTCAAACATC
       :::::::: :: ::::: ::::::::::::::  :::: :::::::::::::: ::: : 
b17625 ATGGAGTGTGTAATGGATAACCCATACATCCTTCTTTATGATAAGAAGATTTCTAACTTG
              370       380       390       400       410       420

              430       440       450       460       470       480
b16820 AAGGATTTCCTGCCTATTTTGCAGCCTGCTGCCGAGAGCGGACGCCCCTTGCTGGTAATC
       ::::: ::: :::: ::: : ::::::::::: ::::: :: :: :: ::: :::: :::
b17625 AAGGAGTTCTTGCCAATTCTCCAGCCTGCTGCTGAGAGTGGTCGTCCTTTGTTGGTTATC
              430       440       450       460       470       480

              490       500       510       520       530       540
b16820 GCCGAGGATGTTGATTCTGAGGCTCTTACCACACTGGTAGTAAACCGTCTGCGTGGTGGT
       :: ::::::::::::::::::::: : :: ::  ::::::: :::::: ::::::: :::
b17625 GCTGAGGATGTTGATTCTGAGGCTTTGACTACTTTGGTAGTTAACCGTTTGCGTGGCGGT
              490       500       510       520       530       540

              550        
b16820 CTGAAGATCTGTGCTGTT
        ::::::: :: ::::: 
b17625 TTGAAGATTTGCGCTGTG
              550        

</pre>
<hr>
<A name=b14123>
<pre>
>><a onClick="window.open('getRecord.php?id=b14123',
                                'cpndb_record'); return false;" href="getRecord.php?id=b14123" target=_"blank">b14123</a> ACBX01000045 Prevotella copri DSM 18205          (558 nt)
 initn: 1882 init1: 1882 opt: 1930  Z-score: 85.3  bits: 25.6 E(): 1.1e+02
banded Smith-Waterman score: 1930; 82.9% identity (82.9% similar) in 557 nt overlap (1-557:1-557)
<p>

               10        20        30        40        50        60
b16820 GCTACCATCCTGGCTCAGGCTATCGTATCAGAGGGCTTGAAGAACGTTACCGCTGGTGCT
       ::::: :::::: :::::::::::::: :::::::::::::::::::::: :: ::::: 
b14123 GCTACTATCCTGACTCAGGCTATCGTAACAGAGGGCTTGAAGAACGTTACTGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b16820 AACCCCATGGACCTGAAGCGTGGTATCGACAAGGCTGTTAAGGCTGTTACTGAGCACATT
       ::::: :::::: ::::::::::::::::::::::::::   ::::::  ::    ::::
b14123 AACCCAATGGACTTGAAGCGTGGTATCGACAAGGCTGTTGCTGCTGTTGTTGCCTTCATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b16820 GCTAAGAGCGCCGAGCAGGTTGGCGACAACTACGATAAGATCGAGCAGGTAGCTACCGTA
           :    :: :::::::: : :::::::::::::::::: :::::::: ::::: :: 
b14123 AAGGAACATGCTGAGCAGGTAGACGACAACTACGATAAGATTGAGCAGGTGGCTACAGTT
              130       140       150       160       170       180

              190       200       210       220       230       240
b16820 TCTGCCAACAACGATAAGGAGATTGGTGAGCTGCTGGCCGAGGCTATGCGTAAGGTATCT
       :::::::::::::::   ::::::::: ::::  :::: :: :::::::: ::::: :::
b14123 TCTGCCAACAACGATGCAGAGATTGGTAAGCTCTTGGCTGACGCTATGCGCAAGGTTTCT
              190       200       210       220       230       240

              250       260       270       280       290       300
b16820 AAGGATGGTGTGATCACTATCGAGGAGAGCAAGAGCCGCGACACACACATTGGTGTAGTT
       ::::::::::: :::::::::::::::::::::::::: :: ::  :::: ::::: :::
b14123 AAGGATGGTGTCATCACTATCGAGGAGAGCAAGAGCCGTGATACCAACATCGGTGTTGTT
              250       260       270       280       290       300

              310       320       330       340       350       360
b16820 GAGGGTATGCAGTTCGATCGTGGTTACCTGTCAGCTTACTTCATCACCGATAGCGAGAAG
       :::::::::::::: :: ::::::::  ::   : ::::::::: :: :::  ::: :::
b14123 GAGGGTATGCAGTTTGACCGTGGTTATTTGAGCGGTTACTTCATGACTGATGCCGACAAG
              310       320       330       340       350       360

              370       380       390       400       410       420
b16820 ATGGAGTGCGTGATGGAGAACCCATACATCCTGATTTACGATAAGAAGATTTCAAACATC
       :::::::: :: ::::: ::::::::::::::  :::: :::::::::::::: ::: : 
b14123 ATGGAGTGTGTAATGGATAACCCATACATCCTTCTTTATGATAAGAAGATTTCTAACTTG
              370       380       390       400       410       420

              430       440       450       460       470       480
b16820 AAGGATTTCCTGCCTATTTTGCAGCCTGCTGCCGAGAGCGGACGCCCCTTGCTGGTAATC
       ::::: ::: :::: ::: : ::::::::::: ::::: :: :: :: ::: :::: :::
b14123 AAGGAGTTCTTGCCAATTCTCCAGCCTGCTGCTGAGAGTGGTCGTCCTTTGTTGGTTATC
              430       440       450       460       470       480

              490       500       510       520       530       540
b16820 GCCGAGGATGTTGATTCTGAGGCTCTTACCACACTGGTAGTAAACCGTCTGCGTGGTGGT
       :: ::::::::::::::::::::: : :: ::  ::::::: :::::: ::::::: :::
b14123 GCTGAGGATGTTGATTCTGAGGCTTTGACTACTTTGGTAGTTAACCGTTTGCGTGGCGGT
              490       500       510       520       530       540

              550        
b16820 CTGAAGATCTGTGCTGTT
        ::::::: :: ::::: 
b14123 TTGAAGATTTGCGCTGTG
              550        

</pre>
<hr>
<A name=b33882>
<pre>
>><a onClick="window.open('getRecord.php?id=b33882',
                                'cpndb_record'); return false;" href="getRecord.php?id=b33882" target=_"blank">b33882</a> NZ_QSCI01000025 Prevotella  copri OF03-3         (558 nt)
 initn: 1837 init1: 1837 opt: 1889  Z-score: 84.0  bits: 25.4 E(): 1.3e+02
banded Smith-Waterman score: 1889; 82.5% identity (82.5% similar) in 559 nt overlap (1-557:1-557)
<p>

               10        20        30        40        50        60
b16820 GCTACCATCCTGGCTCAGGCTATCGTATCAGAGGGCTTGAAGAACGTTACCGCTGGTGCT
       ::::: :::::: :::::::::::::: :::::::::::::::::::::: :: ::::: 
b33882 GCTACTATCCTGACTCAGGCTATCGTAACAGAGGGCTTGAAGAACGTTACTGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b16820 AACCCCATGGACCTGAAGCGTGGTATCGACAAGGCTGTTAAGGCTGTTACTGAGCACATT
       ::::: :::::: :::: ::::::::::::::::::::    ::::::  ::    ::: 
b33882 AACCCAATGGACTTGAAACGTGGTATCGACAAGGCTGTAGCTGCTGTTGTTGCCTTCAT-
               70        80        90       100       110          

                130       140       150       160       170        
b16820 GCTAAGAGC--GCCGAGCAGGTTGGCGACAACTACGATAAGATCGAGCAGGTAGCTACCG
        : : :: :  :: :: ::::: : :::::::::::::::::: :::::::: ::::: :
b33882 -CAAGGAACATGCTGAACAGGTAGACGACAACTACGATAAGATTGAGCAGGTGGCTACAG
      120       130       140       150       160       170        

      180       190       200       210       220       230        
b16820 TATCTGCCAACAACGATAAGGAGATTGGTGAGCTGCTGGCCGAGGCTATGCGTAAGGTAT
       : :::::::::::::::   ::::::::: ::::  :::: :: :::::::: ::::: :
b33882 TTTCTGCCAACAACGATGCAGAGATTGGTAAGCTCTTGGCTGACGCTATGCGCAAGGTTT
      180       190       200       210       220       230        

      240       250       260       270       280       290        
b16820 CTAAGGATGGTGTGATCACTATCGAGGAGAGCAAGAGCCGCGACACACACATTGGTGTAG
       ::::::::::::: :::::::::::::::::::::::::: :: ::  :::: ::::: :
b33882 CTAAGGATGGTGTCATCACTATCGAGGAGAGCAAGAGCCGTGATACCAACATCGGTGTTG
      240       250       260       270       280       290        

      300       310       320       330       340       350        
b16820 TTGAGGGTATGCAGTTCGATCGTGGTTACCTGTCAGCTTACTTCATCACCGATAGCGAGA
       :::::::::::::::: :: ::::::::  ::   : ::::::::: :: :::   :: :
b33882 TTGAGGGTATGCAGTTTGACCGTGGTTATTTGAGCGGTTACTTCATGACTGATGCAGACA
      300       310       320       330       340       350        

      360       370       380       390       400       410        
b16820 AGATGGAGTGCGTGATGGAGAACCCATACATCCTGATTTACGATAAGAAGATTTCAAACA
       :::::::::: :: ::::: ::::::::::::::  :::: :::::::::::::: ::: 
b33882 AGATGGAGTGTGTAATGGATAACCCATACATCCTTCTTTATGATAAGAAGATTTCTAACT
      360       370       380       390       400       410        

      420       430       440       450       460       470        
b16820 TCAAGGATTTCCTGCCTATTTTGCAGCCTGCTGCCGAGAGCGGACGCCCCTTGCTGGTAA
       : ::::: ::: :::: ::: : ::::::::::: ::::: :: :: :: ::: :::: :
b33882 TGAAGGAGTTCTTGCCAATTCTCCAGCCTGCTGCTGAGAGTGGTCGTCCTTTGTTGGTTA
      420       430       440       450       460       470        

      480       490       500       510       520       530        
b16820 TCGCCGAGGATGTTGATTCTGAGGCTCTTACCACACTGGTAGTAAACCGTCTGCGTGGTG
       :::: ::::::::::::::::::::: : :: ::  ::::::: :::::: ::::::: :
b33882 TCGCTGAGGATGTTGATTCTGAGGCTTTGACTACTTTGGTAGTTAACCGTTTGCGTGGCG
      480       490       500       510       520       530        

      540       550        
b16820 GTCTGAAGATCTGTGCTGTT
       :: ::::::: :: ::::: 
b33882 GTTTGAAGATTTGCGCTGTG
      540       550        

</pre>
<hr>
<A name=b30281>
<pre>
>><a onClick="window.open('getRecord.php?id=b30281',
                                'cpndb_record'); return false;" href="getRecord.php?id=b30281" target=_"blank">b30281</a> NZ_NMPZ01000014  Prevotella  copri  Indica       (558 nt)
 initn: 1849 init1: 1849 opt: 1880  Z-score: 83.7  bits: 25.3 E(): 1.4e+02
banded Smith-Waterman score: 1880; 82.3% identity (82.3% similar) in 559 nt overlap (1-557:1-557)
<p>

               10        20        30        40        50        60
b16820 GCTACCATCCTGGCTCAGGCTATCGTATCAGAGGGCTTGAAGAACGTTACCGCTGGTGCT
       ::::: :::::: :::::::::::::: : ::::::::::::::::: :: :: ::::::
b30281 GCTACTATCCTGACTCAGGCTATCGTAACTGAGGGCTTGAAGAACGTAACTGCAGGTGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b16820 AACCCCATGGACCTGAAGCGTGGTATCGACAAGGCTGTTAAGGCTGTTACTGAGCACATT
       ::::: :::::  ::::::::::::::::::::::::::   :::::   ::    ::: 
b30281 AACCCAATGGATTTGAAGCGTGGTATCGACAAGGCTGTTGCTGCTGTCGTTGCCTTCAT-
               70        80        90       100       110          

                130       140       150       160       170        
b16820 GCTAAGAGC--GCCGAGCAGGTTGGCGACAACTACGATAAGATCGAGCAGGTAGCTACCG
        : : :: :  :: :::::::: :  :::::::: :: ::::: :::::::: ::::: :
b30281 -CAAGGATCATGCTGAGCAGGTAGATGACAACTATGACAAGATTGAGCAGGTGGCTACTG
      120       130       140       150       160       170        

      180       190       200       210       220       230        
b16820 TATCTGCCAACAACGATAAGGAGATTGGTGAGCTGCTGGCCGAGGCTATGCGTAAGGTAT
       : :::::::::::::::   ::::::::: ::::  :::: :: :::::::: ::::: :
b30281 TTTCTGCCAACAACGATGCAGAGATTGGTAAGCTCTTGGCTGACGCTATGCGCAAGGTTT
      180       190       200       210       220       230        

      240       250       260       270       280       290        
b16820 CTAAGGATGGTGTGATCACTATCGAGGAGAGCAAGAGCCGCGACACACACATTGGTGTAG
       ::::::::::::: :::::::::::::::::::::::::: :: ::  : :::::::: :
b30281 CTAAGGATGGTGTCATCACTATCGAGGAGAGCAAGAGCCGTGATACCAATATTGGTGTTG
      240       250       260       270       280       290        

      300       310       320       330       340       350        
b16820 TTGAGGGTATGCAGTTCGATCGTGGTTACCTGTCAGCTTACTTCATCACCGATAGCGAGA
       ::::::::::::::::::: ::::::::: ::   : ::::::::: :: ::    :: :
b30281 TTGAGGGTATGCAGTTCGACCGTGGTTACTTGAGCGGTTACTTCATGACTGACGCAGACA
      300       310       320       330       340       350        

      360       370       380       390       400       410        
b16820 AGATGGAGTGCGTGATGGAGAACCCATACATCCTGATTTACGATAAGAAGATTTCAAACA
       ::::::: :: :: ::::: :: :::::::::::  ::::::::::::::::::: ::: 
b30281 AGATGGAATGTGTAATGGATAATCCATACATCCTTCTTTACGATAAGAAGATTTCTAACC
      360       370       380       390       400       410        

      420       430       440       450       460       470        
b16820 TCAAGGATTTCCTGCCTATTTTGCAGCCTGCTGCCGAGAGCGGACGCCCCTTGCTGGTAA
       : ::::: ::: :::: ::: : ::::: ::::: :::::::: :: :: ::: ::::::
b30281 TGAAGGAGTTCTTGCCAATTCTCCAGCCAGCTGCAGAGAGCGGTCGTCCTTTGTTGGTAA
      420       430       440       450       460       470        

      480       490       500       510       520       530        
b16820 TCGCCGAGGATGTTGATTCTGAGGCTCTTACCACACTGGTAGTAAACCGTCTGCGTGGTG
       :::: ::::::::::::::::::::: : :: ::: :::: :: :::::: ::::::: :
b30281 TCGCTGAGGATGTTGATTCTGAGGCTTTGACAACATTGGTTGTTAACCGTTTGCGTGGCG
      480       490       500       510       520       530        

      540       550        
b16820 GTCTGAAGATCTGTGCTGTT
       :: ::::::::::::: :: 
b30281 GTTTGAAGATCTGTGCAGTA
      540       550        

</pre>
<hr>
<A name=b17633>
<pre>
>><a onClick="window.open('getRecord.php?id=b17633',
                                'cpndb_record'); return false;" href="getRecord.php?id=b17633" target=_"blank">b17633</a> AB547590 Prevotella albensis JCM 12258           (558 nt)
 initn: 1787 init1: 1787 opt: 1831  Z-score: 82.2  bits: 25.0 E(): 1.7e+02
banded Smith-Waterman score: 1831; 81.0% identity (81.0% similar) in 557 nt overlap (1-557:1-557)
<p>

               10        20        30        40        50        60
b16820 GCTACCATCCTGGCTCAGGCTATCGTATCAGAGGGCTTGAAGAACGTTACCGCTGGTGCT
       ::::: :::::  :::::::::::::: :::: ::  :::::::::: :: :: ::::: 
b17633 GCTACTATCCTTACTCAGGCTATCGTAACAGAAGGTCTGAAGAACGTAACAGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b16820 AACCCCATGGACCTGAAGCGTGGTATCGACAAGGCTGTTAAGGCTGTTACTGAGCACATT
       :: :: :::::  :::::::::::::::: ::::::::::  :::::    ::  : :: 
b17633 AATCCAATGGATTTGAAGCGTGGTATCGATAAGGCTGTTAGTGCTGTAGTAGACTATATC
               70        80        90       100       110       120

              130       140       150       160       170       180
b16820 GCTAAGAGCGCCGAGCAGGTTGGCGACAACTACGATAAGATCGAGCAGGTAGCTACCGTA
          :: :  :: ::::: :::::::::::::: :::::::: :::::::: ::::: :: 
b17633 AAGAACAATGCTGAGCAAGTTGGCGACAACTATGATAAGATAGAGCAGGTTGCTACAGTT
              130       140       150       160       170       180

              190       200       210       220       230       240
b16820 TCTGCCAACAACGATAAGGAGATTGGTGAGCTGCTGGCCGAGGCTATGCGTAAGGTATCT
       ::::: ::::: :::   :: :::::: :  :: :::: :: :: ::::: ::::: :::
b17633 TCTGCAAACAATGATCCAGAAATTGGTAAATTGTTGGCTGATGCAATGCGCAAGGTTTCT
              190       200       210       220       230       240

              250       260       270       280       290       300
b16820 AAGGATGGTGTGATCACTATCGAGGAGAGCAAGAGCCGCGACACACACATTGGTGTAGTT
       ::::::::::: :: :::::::::::::::::::::::::: ::::: :::: ::: :: 
b17633 AAGGATGGTGTAATTACTATCGAGGAGAGCAAGAGCCGCGATACACATATTGATGTCGTA
              250       260       270       280       290       300

              310       320       330       340       350       360
b16820 GAGGGTATGCAGTTCGATCGTGGTTACCTGTCAGCTTACTTCATCACCGATAGCGAGAAG
       ::::::::::::::::::::::: ::: :::: :  :: ::: : :: :::   ::::::
b17633 GAGGGTATGCAGTTCGATCGTGGCTACTTGTCTGGCTATTTCGTAACAGATGCAGAGAAG
              310       320       330       340       350       360

              370       380       390       400       410       420
b16820 ATGGAGTGCGTGATGGAGAACCCATACATCCTGATTTACGATAAGAAGATTTCAAACATC
       ::::::::::: ::::: :: ::::::::: :: ::::::::::::::::    ::: : 
b17633 ATGGAGTGCGTTATGGACAATCCATACATCTTGCTTTACGATAAGAAGATCAGCAACCTG
              370       380       390       400       410       420

              430       440       450       460       470       480
b16820 AAGGATTTCCTGCCTATTTTGCAGCCTGCTGCCGAGAGCGGACGCCCCTTGCTGGTAATC
       :: :: ::: :::: ::  : :: ::::: :: :: :: :: ::::: ::: :::: :::
b17633 AAAGAATTCTTGCCAATCCTACAACCTGCAGCAGAAAGTGGCCGCCCATTGATGGTTATC
              430       440       450       460       470       480

              490       500       510       520       530       540
b16820 GCCGAGGATGTTGATTCTGAGGCTCTTACCACACTGGTAGTAAACCGTCTGCGTGGTGGT
       :: :::::::: ::::::::::::::::::::: ::::::: ::::::::::::::::::
b17633 GCTGAGGATGTAGATTCTGAGGCTCTTACCACATTGGTAGTTAACCGTCTGCGTGGTGGT
              490       500       510       520       530       540

              550        
b16820 CTGAAGATCTGTGCTGTT
        ::::::::::::: :: 
b17633 TTGAAGATCTGTGCAGTA
              550        

</pre>
<hr>
<A name=b17591>
<pre>
>><a onClick="window.open('getRecord.php?id=b17591',
                                'cpndb_record'); return false;" href="getRecord.php?id=b17591" target=_"blank">b17591</a> AB547632 Prevotella stercorea JCM 13469          (558 nt)
 initn: 1745 init1: 1745 opt: 1808  Z-score: 81.5  bits: 24.9 E(): 1.8e+02
banded Smith-Waterman score: 1808; 80.9% identity (80.9% similar) in 559 nt overlap (1-557:1-557)
<p>

               10        20        30        40        50        60
b16820 GCTACCATCCTGGCTCAGGCTATCGTATCAGAGGGCTTGAAGAACGTTACCGCTGGTGCT
       ::::: :::::  :::::::::::::: : ::::: ::::::::::: ::::: ::::::
b17591 GCTACAATCCTCACTCAGGCTATCGTAACCGAGGGTTTGAAGAACGTAACCGCAGGTGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b16820 AACCCCATGGACCTGAAGCGTGGTATCGACAAGGCTGTTAAGGCTGTTACTGAGCACATT
       ::::: ::::::::::::::::::::::::::::: ::    :::::  :  ::::::  
b17591 AACCCGATGGACCTGAAGCGTGGTATCGACAAGGCAGTGGCTGCTGT--CGTAGCACACA
               70        80        90       100         110        

                130       140       150       160       170        
b16820 GCTAAG--AGCGCCGAGCAGGTTGGCGACAACTACGATAAGATCGAGCAGGTAGCTACCG
        : : :  : ::: :::   ::::::::::::::::: ::::: ::::::::::: ::::
b17591 TCAAGGCAAACGCAGAGATTGTTGGCGACAACTACGACAAGATTGAGCAGGTAGCAACCG
      120       130       140       150       160       170        

      180       190       200       210       220       230        
b16820 TATCTGCCAACAACGATAAGGAGATTGGTGAGCTGCTGGCCGAGGCTATGCGTAAGGTAT
       : ::::: ::::::::   :::::::::: :::: ::::: :: :: ::::: ::::: :
b17591 TTTCTGCTAACAACGACCCGGAGATTGGTAAGCTCCTGGCTGACGCAATGCGCAAGGTGT
      180       190       200       210       220       230        

      240       250       260       270       280       290        
b16820 CTAAGGATGGTGTGATCACTATCGAGGAGAGCAAGAGCCGCGACACACACATTGGTGTAG
       ::::::: :: :: ::::: ::::::::::::::::::::::::::: :::: :: ::: 
b17591 CTAAGGACGGCGTAATCACCATCGAGGAGAGCAAGAGCCGCGACACAAACATCGGCGTAA
      240       250       260       270       280       290        

      300       310       320       330       340       350        
b16820 TTGAGGGTATGCAGTTCGATCGTGGTTACCTGTCAGCTTACTTCATCACCGATAGCGAGA
         :: ::::::::::: :: :: ::::: :::   ::::::::: : :::::    ::::
b17591 CAGAAGGTATGCAGTTTGACCGCGGTTATCTGAGTGCTTACTTCGTTACCGACTCTGAGA
      300       310       320       330       340       350        

      360       370       380       390       400       410        
b16820 AGATGGAGTGCGTGATGGAGAACCCATACATCCTGATTTACGATAAGAAGATTTCAAACA
       ::::::::::::: ::::: ::::: :::::::: :: ::::: ::::::::    : : 
b17591 AGATGGAGTGCGTTATGGACAACCCGTACATCCTTATCTACGACAAGAAGATCAGCAGCG
      360       370       380       390       400       410        

      420       430       440       450       460       470        
b16820 TCAAGGATTTCCTGCCTATTTTGCAGCCTGCTGCCGAGAGCGGACGCCCCTTGCTGGTAA
       : ::::: :: ::::::::  ::::::: ::::: ::::::::::::::  ::::  : :
b17591 TTAAGGACTTGCTGCCTATCCTGCAGCCGGCTGCAGAGAGCGGACGCCCGATGCTCATCA
      420       430       440       450       460       470        

      480       490       500       510       520       530        
b16820 TCGCCGAGGATGTTGATTCTGAGGCTCTTACCACACTGGTAGTAAACCGTCTGCGTGGTG
       :::: ::::: :: :: :::::::: :: :::::::: :: :: :::::::::::::  :
b17591 TCGCTGAGGACGTAGACTCTGAGGCACTCACCACACTCGTTGTGAACCGTCTGCGTGCAG
      480       490       500       510       520       530        

      540       550        
b16820 GTCTGAAGATCTGTGCTGTT
       :  :::::::::: ::::: 
b17591 GCTTGAAGATCTGCGCTGTG
      540       550        

</pre>
<hr>
<A name=b20077>
<pre>
>><a onClick="window.open('getRecord.php?id=b20077',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20077" target=_"blank">b20077</a> AFZZ01000171 Prevotella stercorea DSM 18206      (558 nt)
 initn: 1745 init1: 1745 opt: 1808  Z-score: 81.5  bits: 24.9 E(): 1.8e+02
banded Smith-Waterman score: 1808; 80.9% identity (80.9% similar) in 559 nt overlap (1-557:1-557)
<p>

               10        20        30        40        50        60
b16820 GCTACCATCCTGGCTCAGGCTATCGTATCAGAGGGCTTGAAGAACGTTACCGCTGGTGCT
       ::::: :::::  :::::::::::::: : ::::: ::::::::::: ::::: ::::::
b20077 GCTACAATCCTCACTCAGGCTATCGTAACCGAGGGTTTGAAGAACGTAACCGCAGGTGCT
               10        20        30        40        50        60

               70        80        90       100       110       120
b16820 AACCCCATGGACCTGAAGCGTGGTATCGACAAGGCTGTTAAGGCTGTTACTGAGCACATT
       ::::: ::::::::::::::::::::::::::::: ::    :::::  :  ::::::  
b20077 AACCCGATGGACCTGAAGCGTGGTATCGACAAGGCAGTGGCTGCTGT--CGTAGCACACA
               70        80        90       100         110        

                130       140       150       160       170        
b16820 GCTAAG--AGCGCCGAGCAGGTTGGCGACAACTACGATAAGATCGAGCAGGTAGCTACCG
        : : :  : ::: :::   ::::::::::::::::: ::::: ::::::::::: ::::
b20077 TCAAGGCAAACGCAGAGATTGTTGGCGACAACTACGACAAGATTGAGCAGGTAGCAACCG
      120       130       140       150       160       170        

      180       190       200       210       220       230        
b16820 TATCTGCCAACAACGATAAGGAGATTGGTGAGCTGCTGGCCGAGGCTATGCGTAAGGTAT
       : ::::: ::::::::   :::::::::: :::: ::::: :: :: ::::: ::::: :
b20077 TTTCTGCTAACAACGACCCGGAGATTGGTAAGCTCCTGGCTGACGCAATGCGCAAGGTGT
      180       190       200       210       220       230        

      240       250       260       270       280       290        
b16820 CTAAGGATGGTGTGATCACTATCGAGGAGAGCAAGAGCCGCGACACACACATTGGTGTAG
       ::::::: :: :: ::::: ::::::::::::::::::::::::::: :::: :: ::: 
b20077 CTAAGGACGGCGTAATCACCATCGAGGAGAGCAAGAGCCGCGACACAAACATCGGCGTAA
      240       250       260       270       280       290        

      300       310       320       330       340       350        
b16820 TTGAGGGTATGCAGTTCGATCGTGGTTACCTGTCAGCTTACTTCATCACCGATAGCGAGA
         :: ::::::::::: :: :: ::::: :::   ::::::::: : :::::    ::::
b20077 CAGAAGGTATGCAGTTTGACCGCGGTTATCTGAGTGCTTACTTCGTTACCGACTCTGAGA
      300       310       320       330       340       350        

      360       370       380       390       400       410        
b16820 AGATGGAGTGCGTGATGGAGAACCCATACATCCTGATTTACGATAAGAAGATTTCAAACA
       ::::::::::::: ::::: ::::: :::::::: :: ::::: ::::::::    : : 
b20077 AGATGGAGTGCGTTATGGACAACCCGTACATCCTTATCTACGACAAGAAGATCAGCAGCG
      360       370       380       390       400       410        

      420       430       440       450       460       470        
b16820 TCAAGGATTTCCTGCCTATTTTGCAGCCTGCTGCCGAGAGCGGACGCCCCTTGCTGGTAA
       : ::::: :: ::::::::  ::::::: ::::: ::::::::::::::  ::::  : :
b20077 TTAAGGACTTGCTGCCTATCCTGCAGCCGGCTGCAGAGAGCGGACGCCCGATGCTCATCA
      420       430       440       450       460       470        

      480       490       500       510       520       530        
b16820 TCGCCGAGGATGTTGATTCTGAGGCTCTTACCACACTGGTAGTAAACCGTCTGCGTGGTG
       :::: ::::: :: :: :::::::: :: :::::::: :: :: :::::::::::::  :
b20077 TCGCTGAGGACGTAGACTCTGAGGCACTCACCACACTCGTTGTGAACCGTCTGCGTGCAG
      480       490       500       510       520       530        

      540       550        
b16820 GTCTGAAGATCTGTGCTGTT
       :  :::::::::: ::::: 
b20077 GCTTGAAGATCTGCGCTGTG
      540       550        

</pre>
<hr>
<A name=b17615>
<pre>
>><a onClick="window.open('getRecord.php?id=b17615',
                                'cpndb_record'); return false;" href="getRecord.php?id=b17615" target=_"blank">b17615</a> AB547608 Prevotella intermedia JCM 12248         (558 nt)
 initn: 1747 init1: 1747 opt: 1786  Z-score: 80.9  bits: 24.8 E(): 2e+02
banded Smith-Waterman score: 1786; 80.1% identity (80.1% similar) in 557 nt overlap (1-557:1-557)
<p>

               10        20        30        40        50        60
b16820 GCTACCATCCTGGCTCAGGCTATCGTATCAGAGGGCTTGAAGAACGTTACCGCTGGTGCT
       :: ::::: ::: : :::::::::::  :::: ::::::::::: ::  : :::::::: 
b17615 GCAACCATTCTGACACAGGCTATCGTTACAGAAGGCTTGAAGAATGTGGCTGCTGGTGCC
               10        20        30        40        50        60

               70        80        90       100       110       120
b16820 AACCCCATGGACCTGAAGCGTGGTATCGACAAGGCTGTTAAGGCTGTTACTGAGCACATT
       :: :: :::::: ::::::::::::::::::::::::: ::    :::   ::   ::::
b17615 AATCCAATGGACTTGAAGCGTGGTATCGACAAGGCTGTCAATAAAGTTGTAGACTTCATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b16820 GCTAAGAGCGCCGAGCAGGTTGGCGACAACTACGATAAGATCGAGCAGGTAGCTACCGTA
           : :: ::::::   ::::::::::::::::: ::::: :: :::::::: ::::::
b17615 AAGGAAAGTGCCGAGATTGTTGGCGACAACTACGACAAGATAGAACAGGTAGCAACCGTA
              130       140       150       160       170       180

              190       200       210       220       230       240
b16820 TCTGCCAACAACGATAAGGAGATTGGTGAGCTGCTGGCCGAGGCTATGCGTAAGGTATCT
         ::::::::::::    :: :::::: :: :::: :: :: :::::::: :::::::: 
b17615 AGTGCCAACAACGACCCTGAAATTGGTAAGTTGCTTGCTGACGCTATGCGCAAGGTATCG
              190       200       210       220       230       240

              250       260       270       280       290       300
b16820 AAGGATGGTGTGATCACTATCGAGGAGAGCAAGAGCCGCGACACACACATTGGTGTAGTT
       :: :: ::::: ::::: ::::: :::::::::: :::::::::  :::: :  :: :::
b17615 AAAGACGGTGTTATCACCATCGAAGAGAGCAAGACCCGCGACACCAACATCGACGTTGTT
              250       260       270       280       290       300

              310       320       330       340       350       360
b16820 GAGGGTATGCAGTTCGATCGTGGTTACCTGTCAGCTTACTTCATCACCGATAGCGAGAAG
       :: :::::::::::::: :::::::: :: :::   :: ::: : :: :::: ::: :::
b17615 GAAGGTATGCAGTTCGACCGTGGTTATCTTTCAAGCTATTTCGTAACAGATACCGATAAG
              310       320       330       340       350       360

              370       380       390       400       410       420
b16820 ATGGAGTGCGTGATGGAGAACCCATACATCCTGATTTACGATAAGAAGATTTCAAACATC
       :::::     : :::::::::::::: ::::: :::::::: :::::::: :: ::: : 
b17615 ATGGAAGTTCTTATGGAGAACCCATATATCCTTATTTACGAGAAGAAGATATCTAACGTA
              370       380       390       400       410       420

              430       440       450       460       470       480
b16820 AAGGATTTCCTGCCTATTTTGCAGCCTGCTGCCGAGAGCGGACGCCCCTTGCTGGTAATC
       ::::::::: ::::::: ::::: :::::::: :: ::::: ::::: ::: :::: :: 
b17615 AAGGATTTCTTGCCTATCTTGCAACCTGCTGCTGAAAGCGGTCGCCCATTGTTGGTTATT
              430       440       450       460       470       480

              490       500       510       520       530       540
b16820 GCCGAGGATGTTGATTCTGAGGCTCTTACCACACTGGTAGTAAACCGTCTGCGTGGTGGT
       :: :: ::::::::::: :::::: : :::::: :::::::::::::: :::::::::: 
b17615 GCAGAAGATGTTGATTCAGAGGCTTTGACCACATTGGTAGTAAACCGTTTGCGTGGTGGC
              490       500       510       520       530       540

              550        
b16820 CTGAAGATCTGTGCTGTT
        ::::::: :::::::: 
b17615 TTGAAGATTTGTGCTGTC
              550        

</pre>
<hr>
<A name=b17614>
<pre>
>><a onClick="window.open('getRecord.php?id=b17614',
                                'cpndb_record'); return false;" href="getRecord.php?id=b17614" target=_"blank">b17614</a> AB547609 Prevotella intermedia JCM 11150         (558 nt)
 initn: 1747 init1: 1747 opt: 1786  Z-score: 80.9  bits: 24.8 E(): 2e+02
banded Smith-Waterman score: 1786; 80.1% identity (80.1% similar) in 557 nt overlap (1-557:1-557)
<p>

               10        20        30        40        50        60
b16820 GCTACCATCCTGGCTCAGGCTATCGTATCAGAGGGCTTGAAGAACGTTACCGCTGGTGCT
       :: ::::: ::: : :::::::::::  :::: ::::::::::: ::  : :::::::: 
b17614 GCAACCATTCTGACACAGGCTATCGTTACAGAAGGCTTGAAGAATGTGGCTGCTGGTGCC
               10        20        30        40        50        60

               70        80        90       100       110       120
b16820 AACCCCATGGACCTGAAGCGTGGTATCGACAAGGCTGTTAAGGCTGTTACTGAGCACATT
       :: :: :::::: ::::::::::::::::::::::::: ::    :::   ::   ::::
b17614 AATCCAATGGACTTGAAGCGTGGTATCGACAAGGCTGTCAATAAAGTTGTAGACTTCATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b16820 GCTAAGAGCGCCGAGCAGGTTGGCGACAACTACGATAAGATCGAGCAGGTAGCTACCGTA
           : :: ::::::   ::::::::::::::::: ::::: :: :::::::: ::::::
b17614 AAGGAAAGTGCCGAGATTGTTGGCGACAACTACGACAAGATAGAACAGGTAGCAACCGTA
              130       140       150       160       170       180

              190       200       210       220       230       240
b16820 TCTGCCAACAACGATAAGGAGATTGGTGAGCTGCTGGCCGAGGCTATGCGTAAGGTATCT
         ::::::::::::    :: :::::: :: :::: :: :: :::::::: :::::::: 
b17614 AGTGCCAACAACGACCCTGAAATTGGTAAGTTGCTTGCTGACGCTATGCGCAAGGTATCG
              190       200       210       220       230       240

              250       260       270       280       290       300
b16820 AAGGATGGTGTGATCACTATCGAGGAGAGCAAGAGCCGCGACACACACATTGGTGTAGTT
       :: :: ::::: ::::: ::::: :::::::::: :::::::::  :::: :  :: :::
b17614 AAAGACGGTGTTATCACCATCGAAGAGAGCAAGACCCGCGACACCAACATCGACGTTGTT
              250       260       270       280       290       300

              310       320       330       340       350       360
b16820 GAGGGTATGCAGTTCGATCGTGGTTACCTGTCAGCTTACTTCATCACCGATAGCGAGAAG
       :: :::::::::::::: :::::::: :: :::   :: ::: : :: :::: ::: :::
b17614 GAAGGTATGCAGTTCGACCGTGGTTATCTTTCAAGCTATTTCGTAACAGATACCGATAAG
              310       320       330       340       350       360

              370       380       390       400       410       420
b16820 ATGGAGTGCGTGATGGAGAACCCATACATCCTGATTTACGATAAGAAGATTTCAAACATC
       :::::     : :::::::::::::: ::::: :::::::: :::::::: :: ::: : 
b17614 ATGGAAGTTCTTATGGAGAACCCATATATCCTTATTTACGAGAAGAAGATATCTAACGTA
              370       380       390       400       410       420

              430       440       450       460       470       480
b16820 AAGGATTTCCTGCCTATTTTGCAGCCTGCTGCCGAGAGCGGACGCCCCTTGCTGGTAATC
       ::::::::: ::::::: ::::: :::::::: :: ::::: ::::: ::: :::: :: 
b17614 AAGGATTTCTTGCCTATCTTGCAACCTGCTGCTGAAAGCGGTCGCCCATTGTTGGTTATT
              430       440       450       460       470       480

              490       500       510       520       530       540
b16820 GCCGAGGATGTTGATTCTGAGGCTCTTACCACACTGGTAGTAAACCGTCTGCGTGGTGGT
       :: :: ::::::::::: :::::: : :::::: :::::::::::::: :::::::::: 
b17614 GCAGAAGATGTTGATTCAGAGGCTTTGACCACATTGGTAGTAAACCGTTTGCGTGGTGGC
              490       500       510       520       530       540

              550        
b16820 CTGAAGATCTGTGCTGTT
        ::::::: :::::::: 
b17614 TTGAAGATTTGTGCTGTC
              550        

</pre>
<hr>
<A name=b1027>
<pre>
>><a onClick="window.open('getRecord.php?id=b1027',
                                'cpndb_record'); return false;" href="getRecord.php?id=b1027" target=_"blank">b1027</a> AF440234 Prevotella intermedia ATCC 25611         (558 nt)
 initn: 1747 init1: 1747 opt: 1786  Z-score: 80.9  bits: 24.8 E(): 2e+02
banded Smith-Waterman score: 1786; 80.1% identity (80.1% similar) in 557 nt overlap (1-557:1-557)
<p>

               10        20        30        40        50        60
b16820 GCTACCATCCTGGCTCAGGCTATCGTATCAGAGGGCTTGAAGAACGTTACCGCTGGTGCT
       :: ::::: ::: : :::::::::::  :::: ::::::::::: ::  : :::::::: 
b1027  GCAACCATTCTGACACAGGCTATCGTTACAGAAGGCTTGAAGAATGTGGCTGCTGGTGCC
               10        20        30        40        50        60

               70        80        90       100       110       120
b16820 AACCCCATGGACCTGAAGCGTGGTATCGACAAGGCTGTTAAGGCTGTTACTGAGCACATT
       :: :: :::::: ::::::::::::::::::::::::: ::    :::   ::   ::::
b1027  AATCCAATGGACTTGAAGCGTGGTATCGACAAGGCTGTCAATAAAGTTGTAGACTTCATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b16820 GCTAAGAGCGCCGAGCAGGTTGGCGACAACTACGATAAGATCGAGCAGGTAGCTACCGTA
           : :: ::::::   ::::::::::::::::: ::::: :: :::::::: ::::::
b1027  AAGGAAAGTGCCGAGATTGTTGGCGACAACTACGACAAGATAGAACAGGTAGCAACCGTA
              130       140       150       160       170       180

              190       200       210       220       230       240
b16820 TCTGCCAACAACGATAAGGAGATTGGTGAGCTGCTGGCCGAGGCTATGCGTAAGGTATCT
         ::::::::::::    :: :::::: :: :::: :: :: :::::::: :::::::: 
b1027  AGTGCCAACAACGACCCTGAAATTGGTAAGTTGCTTGCTGACGCTATGCGCAAGGTATCG
              190       200       210       220       230       240

              250       260       270       280       290       300
b16820 AAGGATGGTGTGATCACTATCGAGGAGAGCAAGAGCCGCGACACACACATTGGTGTAGTT
       :: :: ::::: ::::: ::::: :::::::::: :::::::::  :::: :  :: :::
b1027  AAAGACGGTGTTATCACCATCGAAGAGAGCAAGACCCGCGACACCAACATCGACGTTGTT
              250       260       270       280       290       300

              310       320       330       340       350       360
b16820 GAGGGTATGCAGTTCGATCGTGGTTACCTGTCAGCTTACTTCATCACCGATAGCGAGAAG
       :: :::::::::::::: :::::::: :: :::   :: ::: : :: :::: ::: :::
b1027  GAAGGTATGCAGTTCGACCGTGGTTATCTTTCAAGCTATTTCGTAACAGATACCGATAAG
              310       320       330       340       350       360

              370       380       390       400       410       420
b16820 ATGGAGTGCGTGATGGAGAACCCATACATCCTGATTTACGATAAGAAGATTTCAAACATC
       :::::     : :::::::::::::: ::::: :::::::: :::::::: :: ::: : 
b1027  ATGGAAGTTCTTATGGAGAACCCATATATCCTTATTTACGAGAAGAAGATATCTAACGTA
              370       380       390       400       410       420

              430       440       450       460       470       480
b16820 AAGGATTTCCTGCCTATTTTGCAGCCTGCTGCCGAGAGCGGACGCCCCTTGCTGGTAATC
       ::::::::: ::::::: ::::: :::::::: :: ::::: ::::: ::: :::: :: 
b1027  AAGGATTTCTTGCCTATCTTGCAACCTGCTGCTGAAAGCGGTCGCCCATTGTTGGTTATT
              430       440       450       460       470       480

              490       500       510       520       530       540
b16820 GCCGAGGATGTTGATTCTGAGGCTCTTACCACACTGGTAGTAAACCGTCTGCGTGGTGGT
       :: :: ::::::::::: :::::: : :::::: :::::::::::::: :::::::::: 
b1027  GCAGAAGATGTTGATTCAGAGGCTTTGACCACATTGGTAGTAAACCGTTTGCGTGGTGGC
              490       500       510       520       530       540

              550        
b16820 CTGAAGATCTGTGCTGTT
        ::::::: :::::::: 
b1027  TTGAAGATTTGTGCTGTC
              550        

</pre>
<hr>
<A name=b21143>
<pre>
>><a onClick="window.open('getRecord.php?id=b21143',
                                'cpndb_record'); return false;" href="getRecord.php?id=b21143" target=_"blank">b21143</a> NC_017861 Prevotella intermedia 17               (558 nt)
 initn: 1702 init1: 1702 opt: 1768  Z-score: 80.3  bits: 24.7 E(): 2.1e+02
banded Smith-Waterman score: 1768; 79.7% identity (79.7% similar) in 557 nt overlap (1-557:1-557)
<p>

               10        20        30        40        50        60
b16820 GCTACCATCCTGGCTCAGGCTATCGTATCAGAGGGCTTGAAGAACGTTACCGCTGGTGCT
       :: ::::: ::: : :::::::::::  :::: ::::::::::: ::  : :::::::: 
b21143 GCAACCATTCTGACACAGGCTATCGTTACAGAAGGCTTGAAGAATGTGGCTGCTGGTGCC
               10        20        30        40        50        60

               70        80        90       100       110       120
b16820 AACCCCATGGACCTGAAGCGTGGTATCGACAAGGCTGTTAAGGCTGTTACTGAGCACATT
       :: :: :::::: ::::::::::::::::::::::::: ::    :::   ::   ::::
b21143 AATCCAATGGACTTGAAGCGTGGTATCGACAAGGCTGTCAATAAAGTTGTAGACTTCATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b16820 GCTAAGAGCGCCGAGCAGGTTGGCGACAACTACGATAAGATCGAGCAGGTAGCTACCGTA
           : :: ::::::   ::::::::::::::::: :: :: :: :::::::: ::::::
b21143 AAGGAAAGTGCCGAGATTGTTGGCGACAACTACGACAAAATAGAACAGGTAGCAACCGTA
              130       140       150       160       170       180

              190       200       210       220       230       240
b16820 TCTGCCAACAACGATAAGGAGATTGGTGAGCTGCTGGCCGAGGCTATGCGTAAGGTATCT
         ::::::::::::    :: :::::: :: :::: :: :: :::::::: :::::::: 
b21143 AGTGCCAACAACGACCCTGAAATTGGTAAGTTGCTTGCTGACGCTATGCGCAAGGTATCG
              190       200       210       220       230       240

              250       260       270       280       290       300
b16820 AAGGATGGTGTGATCACTATCGAGGAGAGCAAGAGCCGCGACACACACATTGGTGTAGTT
       :: :: ::::: ::::: ::::: :::::::::: :::::::::  :::: :  :: :::
b21143 AAAGACGGTGTTATCACCATCGAAGAGAGCAAGACCCGCGACACCAACATCGACGTTGTT
              250       260       270       280       290       300

              310       320       330       340       350       360
b16820 GAGGGTATGCAGTTCGATCGTGGTTACCTGTCAGCTTACTTCATCACCGATAGCGAGAAG
       :: ::::::::::::::::::::::: :: :::   :: ::: : :: :::: ::: :::
b21143 GAAGGTATGCAGTTCGATCGTGGTTATCTTTCAAGCTATTTCGTAACAGATACCGATAAG
              310       320       330       340       350       360

              370       380       390       400       410       420
b16820 ATGGAGTGCGTGATGGAGAACCCATACATCCTGATTTACGATAAGAAGATTTCAAACATC
       :::::     : :::::::::::::: ::::: :::::::: :::::::: :: ::: : 
b21143 ATGGAAGTTCTTATGGAGAACCCATATATCCTTATTTACGAGAAGAAGATATCTAACGTA
              370       380       390       400       410       420

              430       440       450       460       470       480
b16820 AAGGATTTCCTGCCTATTTTGCAGCCTGCTGCCGAGAGCGGACGCCCCTTGCTGGTAATC
       ::::::::: ::::::: ::::: :::::::: :: ::::: ::::: ::: :::: :: 
b21143 AAGGATTTCTTGCCTATCTTGCAACCTGCTGCTGAAAGCGGTCGCCCATTGTTGGTTATT
              430       440       450       460       470       480

              490       500       510       520       530       540
b16820 GCCGAGGATGTTGATTCTGAGGCTCTTACCACACTGGTAGTAAACCGTCTGCGTGGTGGT
       :: :: ::::::::::: :: ::: : :::::: :::::::::::::: :::::::::: 
b21143 GCAGAAGATGTTGATTCAGAAGCTTTGACCACATTGGTAGTAAACCGTTTGCGTGGTGGC
              490       500       510       520       530       540

              550        
b16820 CTGAAGATCTGTGCTGTT
        ::::::: :: ::::: 
b21143 TTGAAGATTTGCGCTGTC
              550        

</pre>
<hr>
<A name=b30104>
<pre>
>><a onClick="window.open('getRecord.php?id=b30104',
                                'cpndb_record'); return false;" href="getRecord.php?id=b30104" target=_"blank">b30104</a> NZ_FZNZ01000022  Prevotella  jejuni  DSM 26989   (558 nt)
 initn: 1665 init1: 1665 opt: 1746  Z-score: 79.6  bits: 24.6 E(): 2.3e+02
banded Smith-Waterman score: 1746; 79.2% identity (79.2% similar) in 558 nt overlap (1-558:1-558)
<p>

               10        20        30        40        50        60
b16820 GCTACCATCCTGGCTCAGGCTATCGTATCAGAGGGCTTGAAGAACGTTACCGCTGGTGCT
       :: :: :::::  : ::::: :::::  : :: :: :::::::::::::: :: ::::: 
b30104 GCAACTATCCTTACCCAGGCAATCGTTACTGAAGGATTGAAGAACGTTACAGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b16820 AACCCCATGGACCTGAAGCGTGGTATCGACAAGGCTGTTAAGGCTGTTACTGAGCACATT
       ::::: :::::::: :: :::::::: :: ::::: :::      ::   ::: :: :: 
b30104 AACCCAATGGACCTCAAACGTGGTATTGATAAGGCCGTTGCTAAGGTGGTTGACCATATC
               70        80        90       100       110       120

              130       140       150       160       170       180
b16820 GCTAAGAGCGCCGAGCAGGTTGGCGACAACTACGATAAGATCGAGCAGGTAGCTACCGTA
             :  :: :::   ::::: :::::::: :: ::::: :::::::::::::: :::
b30104 AAGGCAACAGCAGAGGTCGTTGGTGACAACTATGACAAGATAGAGCAGGTAGCTACTGTA
              130       140       150       160       170       180

              190       200       210       220       230       240
b16820 TCTGCCAACAACGATAAGGAGATTGGTGAGCTGCTGGCCGAGGCTATGCGTAAGGTATCT
         ::: ::::::::    :: :::::: :: :::: :: :: :: ::::::::::: :::
b30104 AGTGCTAACAACGACCCAGAAATTGGTAAGTTGCTTGCAGATGCAATGCGTAAGGTGTCT
              190       200       210       220       230       240

              250       260       270       280       290       300
b16820 AAGGATGGTGTGATCACTATCGAGGAGAGCAAGAGCCGCGACACACACATTGGTGTAGTT
       ::::::::::: ::::::::::: :::::::::: ::: :: :::  ::: :: :: :::
b30104 AAGGATGGTGTTATCACTATCGAAGAGAGCAAGACCCGTGAGACAAGCATCGGCGTTGTT
              250       260       270       280       290       300

              310       320       330       340       350       360
b16820 GAGGGTATGCAGTTCGATCGTGGTTACCTGTCAGCTTACTTCATCACCGATAGCGAGAAG
       ::::::::::::::::::::::::::::: :: : ::::::: : :: ::::  :: :::
b30104 GAGGGTATGCAGTTCGATCGTGGTTACCTCTCTGGTTACTTCGTAACAGATACAGACAAG
              310       320       330       340       350       360

              370       380       390       400       410       420
b16820 ATGGAGTGCGTGATGGAGAACCCATACATCCTGATTTACGATAAGAAGATTTCAAACATC
       :::::::: :  :::::::::::::::::::: :: ::::::::::::::::::::: : 
b30104 ATGGAGTGTGATATGGAGAACCCATACATCCTCATCTACGATAAGAAGATTTCAAACGTT
              370       380       390       400       410       420

              430       440       450       460       470       480
b16820 AAGGATTTCCTGCCTATTTTGCAGCCTGCTGCCGAGAGCGGACGCCCCTTGCTGGTAATC
       ::::: ::::: :: ::: : ::::: ::::: ::::: :: :: :: ::: ::::::: 
b30104 AAGGACTTCCTTCCAATTCTCCAGCCAGCTGCAGAGAGTGGTCGTCCATTGTTGGTAATT
              430       440       450       460       470       480

              490       500       510       520       530       540
b16820 GCCGAGGATGTTGATTCTGAGGCTCTTACCACACTGGTAGTAAACCGTCTGCGTGGTGGT
       :: ::::::::::: :: :::::  : :: ::: :::::::::::::::: ::::  :::
b30104 GCAGAGGATGTTGACTCAGAGGCATTGACAACATTGGTAGTAAACCGTCTTCGTGCAGGT
              490       500       510       520       530       540

              550        
b16820 CTGAAGATCTGTGCTGTT
        ::::::: :::::::::
b30104 TTGAAGATTTGTGCTGTT
              550        

</pre>
<hr>
<A name=b31098>
<pre>
>><a onClick="window.open('getRecord.php?id=b31098',
                                'cpndb_record'); return false;" href="getRecord.php?id=b31098" target=_"blank">b31098</a> NSLZ01000010 Prevotella intermedia WW855         (558 nt)
 initn: 1675 init1: 1675 opt: 1741  Z-score: 79.5  bits: 24.5 E(): 2.4e+02
banded Smith-Waterman score: 1741; 79.2% identity (79.2% similar) in 557 nt overlap (1-557:1-557)
<p>

               10        20        30        40        50        60
b16820 GCTACCATCCTGGCTCAGGCTATCGTATCAGAGGGCTTGAAGAACGTTACCGCTGGTGCT
       :: ::::: ::: : :::::::::::  :::: ::::::::::: ::  : :: ::::: 
b31098 GCAACCATTCTGACACAGGCTATCGTTACAGAAGGCTTGAAGAATGTGGCTGCCGGTGCC
               10        20        30        40        50        60

               70        80        90       100       110       120
b16820 AACCCCATGGACCTGAAGCGTGGTATCGACAAGGCTGTTAAGGCTGTTACTGAGCACATT
       :: :: :::::  ::::::::::::::::::::::::: ::    :::   ::   ::::
b31098 AATCCAATGGATTTGAAGCGTGGTATCGACAAGGCTGTCAATAAAGTTGTAGACTTCATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b16820 GCTAAGAGCGCCGAGCAGGTTGGCGACAACTACGATAAGATCGAGCAGGTAGCTACCGTA
           : :: ::::::   ::::::::::::::::: ::::: :: :: ::::: ::::::
b31098 AAGGAAAGTGCCGAGATAGTTGGCGACAACTACGACAAGATAGAACAAGTAGCAACCGTA
              130       140       150       160       170       180

              190       200       210       220       230       240
b16820 TCTGCCAACAACGATAAGGAGATTGGTGAGCTGCTGGCCGAGGCTATGCGTAAGGTATCT
         ::::::::::::    :: :::::: :: :::: :: :: :::::::: :::::::: 
b31098 AGTGCCAACAACGACCCTGAAATTGGTAAGTTGCTTGCTGACGCTATGCGCAAGGTATCG
              190       200       210       220       230       240

              250       260       270       280       290       300
b16820 AAGGATGGTGTGATCACTATCGAGGAGAGCAAGAGCCGCGACACACACATTGGTGTAGTT
       :: :: ::::: ::::: ::::: :::::::: : :::::::::  :::: :  :: :::
b31098 AAAGACGGTGTTATCACCATCGAAGAGAGCAAAACCCGCGACACCAACATCGACGTTGTT
              250       260       270       280       290       300

              310       320       330       340       350       360
b16820 GAGGGTATGCAGTTCGATCGTGGTTACCTGTCAGCTTACTTCATCACCGATAGCGAGAAG
       :: :::::::::::::: :::::::: :: :::   :: ::: : :: :::: ::: :::
b31098 GAAGGTATGCAGTTCGACCGTGGTTATCTTTCAAGCTATTTCGTAACAGATACCGATAAG
              310       320       330       340       350       360

              370       380       390       400       410       420
b16820 ATGGAGTGCGTGATGGAGAACCCATACATCCTGATTTACGATAAGAAGATTTCAAACATC
       :::::     : :::::::::::::: ::::: :::::::: :::::::: :: ::: : 
b31098 ATGGAAGTTCTTATGGAGAACCCATATATCCTTATTTACGAGAAGAAGATATCTAACGTA
              370       380       390       400       410       420

              430       440       450       460       470       480
b16820 AAGGATTTCCTGCCTATTTTGCAGCCTGCTGCCGAGAGCGGACGCCCCTTGCTGGTAATC
       ::::::::: ::::::: ::::: :::::::: :: ::::: ::::: ::: :::: :: 
b31098 AAGGATTTCTTGCCTATCTTGCAACCTGCTGCTGAAAGCGGTCGCCCATTGTTGGTTATT
              430       440       450       460       470       480

              490       500       510       520       530       540
b16820 GCCGAGGATGTTGATTCTGAGGCTCTTACCACACTGGTAGTAAACCGTCTGCGTGGTGGT
       :: :: ::::::::::: :::::: : ::::::::::::::::::::: ::::::: :: 
b31098 GCAGAAGATGTTGATTCAGAGGCTTTGACCACACTGGTAGTAAACCGTTTGCGTGGCGGC
              490       500       510       520       530       540

              550        
b16820 CTGAAGATCTGTGCTGTT
        ::::::: :: ::::: 
b31098 TTGAAGATTTGCGCTGTC
              550        

</pre>
<hr>
<A name=b13603>
<pre>
>><a onClick="window.open('getRecord.php?id=b13603',
                                'cpndb_record'); return false;" href="getRecord.php?id=b13603" target=_"blank">b13603</a> AB480537 Prevotella falsenii JCM 15124           (558 nt)
 initn: 1675 init1: 1675 opt: 1741  Z-score: 79.5  bits: 24.5 E(): 2.4e+02
banded Smith-Waterman score: 1741; 79.2% identity (79.2% similar) in 557 nt overlap (1-557:1-557)
<p>

               10        20        30        40        50        60
b16820 GCTACCATCCTGGCTCAGGCTATCGTATCAGAGGGCTTGAAGAACGTTACCGCTGGTGCT
       :: ::::: ::: : :::::::::::  : :: ::::::::::: ::  : :: ::::: 
b13603 GCAACCATTCTGACACAGGCTATCGTTACCGAAGGCTTGAAGAATGTGGCTGCCGGTGCC
               10        20        30        40        50        60

               70        80        90       100       110       120
b16820 AACCCCATGGACCTGAAGCGTGGTATCGACAAGGCTGTTAAGGCTGTTACTGAGCACATT
       :: :: :::::: ::::::: ::::::::::::::::: ::    :::   :::  ::::
b13603 AATCCGATGGACTTGAAGCGCGGTATCGACAAGGCTGTCAATAAAGTTGTAGAGTTCATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b16820 GCTAAGAGCGCCGAGCAGGTTGGCGACAACTACGATAAGATCGAGCAGGTAGCTACCGTA
           : :: :::::    ::::::::::::::::: ::::: :: ::::: :: ::::::
b13603 AAGGAAAGTGCCGAAATTGTTGGCGACAACTACGACAAGATAGAACAGGTGGCAACCGTA
              130       140       150       160       170       180

              190       200       210       220       230       240
b16820 TCTGCCAACAACGATAAGGAGATTGGTGAGCTGCTGGCCGAGGCTATGCGTAAGGTATCT
         ::::::::::::    :: :::::  : ::::: ::::: :::::::: :::::::: 
b13603 AGTGCCAACAACGACCCTGAAATTGGCAAACTGCTTGCCGACGCTATGCGCAAGGTATCG
              190       200       210       220       230       240

              250       260       270       280       290       300
b16820 AAGGATGGTGTGATCACTATCGAGGAGAGCAAGAGCCGCGACACACACATTGGTGTAGTT
       :: :: ::::: ::::: ::::: :: ::::::: ::::::::::  ::: : ::: :::
b13603 AAAGACGGTGTTATCACCATCGAAGAAAGCAAGACCCGCGACACAACCATCGATGTTGTT
              250       260       270       280       290       300

              310       320       330       340       350       360
b16820 GAGGGTATGCAGTTCGATCGTGGTTACCTGTCAGCTTACTTCATCACCGATAGCGAGAAG
       :: :::::::::::::: ::::: :: :: :::   :: ::: : :: :::: :::::::
b13603 GAAGGTATGCAGTTCGACCGTGGCTATCTTTCAAGCTATTTCGTAACAGATACCGAGAAG
              310       320       330       340       350       360

              370       380       390       400       410       420
b16820 ATGGAGTGCGTGATGGAGAACCCATACATCCTGATTTACGATAAGAAGATTTCAAACATC
       :::::     : :::::::::::::: ::::: :::::::: :: :::::::: ::  : 
b13603 ATGGAAGTTCTTATGGAGAACCCATATATCCTTATTTACGACAAAAAGATTTCCAATGTA
              370       380       390       400       410       420

              430       440       450       460       470       480
b16820 AAGGATTTCCTGCCTATTTTGCAGCCTGCTGCCGAGAGCGGACGCCCCTTGCTGGTAATC
       ::::::::::::::::: :::::::::::::: :: ::::: ::::: ::: :::: :: 
b13603 AAGGATTTCCTGCCTATCTTGCAGCCTGCTGCTGAAAGCGGTCGCCCATTGTTGGTTATT
              430       440       450       460       470       480

              490       500       510       520       530       540
b16820 GCCGAGGATGTTGATTCTGAGGCTCTTACCACACTGGTAGTAAACCGTCTGCGTGGTGGT
       :: :: ::::: :::::::: ::::: :: ::: :::::::::::::: :::::::::: 
b13603 GCAGAAGATGTCGATTCTGAAGCTCTGACAACATTGGTAGTAAACCGTTTGCGTGGTGGA
              490       500       510       520       530       540

              550        
b16820 CTGAAGATCTGTGCTGTT
        ::::::: :: ::::: 
b13603 TTGAAGATTTGCGCTGTC
              550        

</pre>
<hr>
<A name=b28068>
<pre>
>><a onClick="window.open('getRecord.php?id=b28068',
                                'cpndb_record'); return false;" href="getRecord.php?id=b28068" target=_"blank">b28068</a> NZ_AWXC01000011 Prevotella  sp.  BV3P1           (558 nt)
 initn: 1708 init1: 1708 opt: 1737  Z-score: 79.4  bits: 24.5 E(): 2.4e+02
banded Smith-Waterman score: 1737; 79.0% identity (79.0% similar) in 558 nt overlap (1-558:1-558)
<p>

               10        20        30        40        50        60
b16820 GCTACCATCCTGGCTCAGGCTATCGTATCAGAGGGCTTGAAGAACGTTACCGCTGGTGCT
       :: :::::: :: : ::::: :: :: :: :: :: :::::::: :: ::::::::::: 
b28068 GCAACCATCTTGACACAGGCCATTGTGTCTGAAGGTTTGAAGAATGTGACCGCTGGTGCC
               10        20        30        40        50        60

               70        80        90       100       110       120
b16820 AACCCCATGGACCTGAAGCGTGGTATCGACAAGGCTGTTAAGGCTGTTACTGAGCACATT
       :::::::::::  :::::::::::::::::::::::::::  :: ::   :::  : :: 
b28068 AACCCCATGGATTTGAAGCGTGGTATCGACAAGGCTGTTAGTGCAGTGGTTGAATATATC
               70        80        90       100       110       120

              130       140       150       160       170       180
b16820 GCTAAGAGCGCCGAGCAGGTTGGCGACAACTACGATAAGATCGAGCAGGTAGCTACCGTA
            :  ::: :: :: :: ::  :::: ::::::::::: :: :: :: :::::::: 
b28068 AAGGCGCACGCAGAACAAGTGGGTAACAATTACGATAAGATAGAACAAGTGGCTACCGTG
              130       140       150       160       170       180

              190       200       210       220       230       240
b16820 TCTGCCAACAACGATAAGGAGATTGGTGAGCTGCTGGCCGAGGCTATGCGTAAGGTATCT
       ::::: :::::::::   ::::::::: ::::  ::::::: ::::::::::::::    
b28068 TCTGCTAACAACGATCCAGAGATTGGTAAGCTCTTGGCCGACGCTATGCGTAAGGTGAGC
              190       200       210       220       230       240

              250       260       270       280       290       300
b16820 AAGGATGGTGTGATCACTATCGAGGAGAGCAAGAGCCGCGACACACACATTGGTGTAGTT
       ::: : ::::::::::: ::::::::::: ::::::::::::::  ::::::: :: :: 
b28068 AAGAACGGTGTGATCACCATCGAGGAGAGTAAGAGCCGCGACACCAACATTGGCGTGGTA
              250       260       270       280       290       300

              310       320       330       340       350       360
b16820 GAGGGTATGCAGTTCGATCGTGGTTACCTGTCAGCTTACTTCATCACCGATAGCGAGAAG
       :::::::::::::: :: :: :: :: ::::::  ::::::: : :: :: :  :: :::
b28068 GAGGGTATGCAGTTTGACCGCGGATATCTGTCAAGTTACTTCGTAACTGACACGGACAAG
              310       320       330       340       350       360

              370       380       390       400       410       420
b16820 ATGGAGTGCGTGATGGAGAACCCATACATCCTGATTTACGATAAGAAGATTTCAAACATC
       :::::: : :::::::: :: :: :::::: :::::::::: :::::::: :: ::::::
b28068 ATGGAGAGTGTGATGGAAAATCCTTACATCTTGATTTACGAAAAGAAGATATCCAACATC
              370       380       390       400       410       420

              430       440       450       460       470       480
b16820 AAGGATTTCCTGCCTATTTTGCAGCCTGCTGCCGAGAGCGGACGCCCCTTGCTGGTAATC
       :: :: ::: : ::::: ::::::  ::: ::::: :: :: ::::: ::: :::: :::
b28068 AAAGAATTCTTACCTATCTTGCAGAATGCAGCCGAAAGTGGCCGCCCATTGTTGGTCATC
              430       440       450       460       470       480

              490       500       510       520       530       540
b16820 GCCGAGGATGTTGATTCTGAGGCTCTTACCACACTGGTAGTAAACCGTCTGCGTGGTGGT
       :: :::::::::::::: :::::: : :: ::  ::::::: ::::: :::::::  :::
b28068 GCAGAGGATGTTGATTCAGAGGCTTTGACAACGTTGGTAGTGAACCGCCTGCGTGCCGGT
              490       500       510       520       530       540

              550        
b16820 CTGAAGATCTGTGCTGTT
        ::::::: :: :: :::
b28068 TTGAAGATATGCGCCGTT
              550        

</pre>
<hr>
<A name=b16438>
<pre>
>><a onClick="window.open('getRecord.php?id=b16438',
                                'cpndb_record'); return false;" href="getRecord.php?id=b16438" target=_"blank">b16438</a> GG740022 Prevotella melaninogenica Oral Taxon 4  (558 nt)
 initn: 1638 init1: 1638 opt: 1728  Z-score: 79.1  bits: 24.5 E(): 2.5e+02
banded Smith-Waterman score: 1728; 79.1% identity (79.1% similar) in 561 nt overlap (1-558:1-558)
<p>

               10        20        30        40        50        60
b16820 GCTACCATCCTGGCTCAGGCTATCGTATCAGAGGGCTTGAAGAACGTTACCGCTGGTGCT
       ::::: :::::  : ::::: :: ::  : :: :: :::::::: ::::: :: ::::: 
b16438 GCTACTATCCTCACACAGGCAATTGTTACTGAAGGATTGAAGAATGTTACAGCAGGTGCA
               10        20        30        40        50        60

               70        80        90          100       110       
b16820 AACCCCATGGACCTGAAGCGTGGTATCGACAAGGCTGT---TAAGGCTGTTACTGAGCAC
       ::::: :::::::: :::::::::::::::::::::::   ::::: :::   ::: :: 
b16438 AACCCAATGGACCTTAAGCGTGGTATCGACAAGGCTGTAGCTAAGGTTGT---TGATCAT
               70        80        90       100       110          

       120       130       140       150       160       170       
b16820 ATTGCTAAGAGCGCCGAGCAGGTTGGCGACAACTACGATAAGATCGAGCAGGTAGCTACC
       :::         :: :::   ::::: :::::::: :: ::::: :::::::::::::: 
b16438 ATTAAGGCTTCTGCAGAGGTAGTTGGTGACAACTATGACAAGATAGAGCAGGTAGCTACT
       120       130       140       150       160       170       

       180       190       200       210       220       230       
b16820 GTATCTGCCAACAACGATAAGGAGATTGGTGAGCTGCTGGCCGAGGCTATGCGTAAGGTA
       :::  ::: ::::::::    :: :: ::: :: :::: :: :: :::::::::::::: 
b16438 GTAAGTGCTAACAACGACCCTGAAATAGGTAAGTTGCTCGCAGATGCTATGCGTAAGGTG
       180       190       200       210       220       230       

       240       250       260       270       280       290       
b16820 TCTAAGGATGGTGTGATCACTATCGAGGAGAGCAAGAGCCGCGACACACACATTGGTGTA
       :::::::::::::: ::::::::::: ::::::::::  :: :: :::   :: ::::: 
b16438 TCTAAGGATGGTGTTATCACTATCGAAGAGAGCAAGACTCGTGAGACAAGTATCGGTGTT
       240       250       260       270       280       290       

       300       310       320       330       340       350       
b16820 GTTGAGGGTATGCAGTTCGATCGTGGTTACCTGTCAGCTTACTTCATCACCGATAGCGAG
       ::::::::::::::::: :::::::::::::: :: : ::::::: : :: ::::  :: 
b16438 GTTGAGGGTATGCAGTTTGATCGTGGTTACCTCTCTGGTTACTTCGTAACAGATACAGAT
       300       310       320       330       340       350       

       360       370       380       390       400       410       
b16820 AAGATGGAGTGCGTGATGGAGAACCCATACATCCTGATTTACGATAAGAAGATTTCAAAC
       ::::::::::: :  :::::::::::::: ::::: :: :: ::::::::::::::::::
b16438 AAGATGGAGTGTGATATGGAGAACCCATATATCCTCATCTATGATAAGAAGATTTCAAAC
       360       370       380       390       400       410       

       420       430       440       450       460       470       
b16820 ATCAAGGATTTCCTGCCTATTTTGCAGCCTGCTGCCGAGAGCGGACGCCCCTTGCTGGTA
        : ::::: ::::: :: ::: : ::::: ::::: ::::: :: :: :: ::: :::: 
b16438 GTTAAGGACTTCCTTCCAATTCTCCAGCCAGCTGCTGAGAGTGGTCGTCCATTGTTGGTC
       420       430       440       450       460       470       

       480       490       500       510       520       530       
b16820 ATCGCCGAGGATGTTGATTCTGAGGCTCTTACCACACTGGTAGTAAACCGTCTGCGTGGT
       :: :: ::::::::::: :: :::::  : :: ::: :::: ::::::::::: ::::  
b16438 ATTGCAGAGGATGTTGACTCAGAGGCATTGACAACATTGGTTGTAAACCGTCTTCGTGCA
       480       490       500       510       520       530       

       540       550        
b16820 GGTCTGAAGATCTGTGCTGTT
       ::: ::::::: :::::::::
b16438 GGTTTGAAGATTTGTGCTGTT
       540       550        

</pre>
<hr>
<A name=b17607>
<pre>
>><a onClick="window.open('getRecord.php?id=b17607',
                                'cpndb_record'); return false;" href="getRecord.php?id=b17607" target=_"blank">b17607</a> AB547616 Prevotella melaninogenica JCM 6321      (558 nt)
 initn: 1638 init1: 1638 opt: 1728  Z-score: 79.1  bits: 24.5 E(): 2.5e+02
banded Smith-Waterman score: 1728; 79.1% identity (79.1% similar) in 561 nt overlap (1-558:1-558)
<p>

               10        20        30        40        50        60
b16820 GCTACCATCCTGGCTCAGGCTATCGTATCAGAGGGCTTGAAGAACGTTACCGCTGGTGCT
       ::::: :::::  : ::::: :: ::  : :: :: :::::::: ::::: :: ::::: 
b17607 GCTACTATCCTCACACAGGCAATTGTTACTGAAGGATTGAAGAATGTTACAGCAGGTGCA
               10        20        30        40        50        60

               70        80        90          100       110       
b16820 AACCCCATGGACCTGAAGCGTGGTATCGACAAGGCTGT---TAAGGCTGTTACTGAGCAC
       ::::: :::::::: :::::::::::::::::::::::   ::::: :::   ::: :: 
b17607 AACCCAATGGACCTTAAGCGTGGTATCGACAAGGCTGTAGCTAAGGTTGT---TGATCAT
               70        80        90       100       110          

       120       130       140       150       160       170       
b16820 ATTGCTAAGAGCGCCGAGCAGGTTGGCGACAACTACGATAAGATCGAGCAGGTAGCTACC
       :::         :: :::   ::::: :::::::: :: ::::: :::::::::::::: 
b17607 ATTAAGGCTTCTGCAGAGGTAGTTGGTGACAACTATGACAAGATAGAGCAGGTAGCTACT
       120       130       140       150       160       170       

       180       190       200       210       220       230       
b16820 GTATCTGCCAACAACGATAAGGAGATTGGTGAGCTGCTGGCCGAGGCTATGCGTAAGGTA
       :::  ::: :::::::::   :: :: ::: :: :::: :: :: :::::::::::::::
b17607 GTAAGTGCTAACAACGATCCTGAAATAGGTAAGTTGCTTGCAGATGCTATGCGTAAGGTA
       180       190       200       210       220       230       

       240       250       260       270       280       290       
b16820 TCTAAGGATGGTGTGATCACTATCGAGGAGAGCAAGAGCCGCGACACACACATTGGTGTA
       :::::::::::::: :::::::: :: ::::::::::  :: :: :::   :: ::::: 
b17607 TCTAAGGATGGTGTTATCACTATTGAAGAGAGCAAGACTCGTGAGACAAGTATCGGTGTT
       240       250       260       270       280       290       

       300       310       320       330       340       350       
b16820 GTTGAGGGTATGCAGTTCGATCGTGGTTACCTGTCAGCTTACTTCATCACCGATAGCGAG
       ::::::::::::::::: :::::::::::::: :: : ::::::: : :: ::::  :: 
b17607 GTTGAGGGTATGCAGTTTGATCGTGGTTACCTCTCTGGTTACTTCGTAACAGATACAGAT
       300       310       320       330       340       350       

       360       370       380       390       400       410       
b16820 AAGATGGAGTGCGTGATGGAGAACCCATACATCCTGATTTACGATAAGAAGATTTCAAAC
       ::::::::::: :  :::::::::::::: ::::: :: :::::::::::::::::::::
b17607 AAGATGGAGTGTGATATGGAGAACCCATATATCCTCATCTACGATAAGAAGATTTCAAAC
       360       370       380       390       400       410       

       420       430       440       450       460       470       
b16820 ATCAAGGATTTCCTGCCTATTTTGCAGCCTGCTGCCGAGAGCGGACGCCCCTTGCTGGTA
        : ::::: ::::: :: ::  : ::::: ::::: ::::: :: :: :: ::  :::: 
b17607 GTTAAGGACTTCCTTCCAATCCTACAGCCAGCTGCTGAGAGTGGTCGTCCATTATTGGTC
       420       430       440       450       460       470       

       480       490       500       510       520       530       
b16820 ATCGCCGAGGATGTTGATTCTGAGGCTCTTACCACACTGGTAGTAAACCGTCTGCGTGGT
       :: :: ::::::::::: :: :::::  : :: ::: :::: ::::::::::: ::::  
b17607 ATTGCAGAGGATGTTGACTCAGAGGCATTGACAACATTGGTTGTAAACCGTCTTCGTGCA
       480       490       500       510       520       530       

       540       550        
b16820 GGTCTGAAGATCTGTGCTGTT
       ::: ::::::: :::::::::
b17607 GGTTTGAAGATTTGTGCTGTT
       540       550        

</pre>
<hr>
<A name=b28410>
<pre>
>><a onClick="window.open('getRecord.php?id=b28410',
                                'cpndb_record'); return false;" href="getRecord.php?id=b28410" target=_"blank">b28410</a> JACD01000105 Prevotella  sp.  ICM33              (558 nt)
 initn: 1638 init1: 1638 opt: 1728  Z-score: 79.1  bits: 24.5 E(): 2.5e+02
banded Smith-Waterman score: 1728; 79.1% identity (79.1% similar) in 561 nt overlap (1-558:1-558)
<p>

               10        20        30        40        50        60
b16820 GCTACCATCCTGGCTCAGGCTATCGTATCAGAGGGCTTGAAGAACGTTACCGCTGGTGCT
       ::::: :::::  : ::::: :: ::  : :: :: :::::::: ::::: :: ::::: 
b28410 GCTACTATCCTCACACAGGCAATTGTTACTGAAGGATTGAAGAATGTTACAGCAGGTGCA
               10        20        30        40        50        60

               70        80        90          100       110       
b16820 AACCCCATGGACCTGAAGCGTGGTATCGACAAGGCTGT---TAAGGCTGTTACTGAGCAC
       ::::: :::::::: :::::::::::::::::::::::   ::::: :::   ::: :: 
b28410 AACCCAATGGACCTTAAGCGTGGTATCGACAAGGCTGTAGCTAAGGTTGT---TGATCAT
               70        80        90       100       110          

       120       130       140       150       160       170       
b16820 ATTGCTAAGAGCGCCGAGCAGGTTGGCGACAACTACGATAAGATCGAGCAGGTAGCTACC
       :::         :: :::   ::::: :::::::: :: ::::: :::::::::::::: 
b28410 ATTAAGGCTTCTGCAGAGGTAGTTGGTGACAACTATGACAAGATAGAGCAGGTAGCTACT
       120       130       140       150       160       170       

       180       190       200       210       220       230       
b16820 GTATCTGCCAACAACGATAAGGAGATTGGTGAGCTGCTGGCCGAGGCTATGCGTAAGGTA
       :::  ::: ::::::::    :: :: ::: :: :::: :: :: :::::::::::::: 
b28410 GTAAGTGCTAACAACGACCCTGAAATAGGTAAGTTGCTCGCAGATGCTATGCGTAAGGTG
       180       190       200       210       220       230       

       240       250       260       270       280       290       
b16820 TCTAAGGATGGTGTGATCACTATCGAGGAGAGCAAGAGCCGCGACACACACATTGGTGTA
       :::::::::::::: ::::::::::: ::::::::::  :: :: :::   :: ::::: 
b28410 TCTAAGGATGGTGTTATCACTATCGAAGAGAGCAAGACTCGTGAGACAAGTATCGGTGTT
       240       250       260       270       280       290       

       300       310       320       330       340       350       
b16820 GTTGAGGGTATGCAGTTCGATCGTGGTTACCTGTCAGCTTACTTCATCACCGATAGCGAG
       :::::::::::::::::::::::::::::::: :: : ::::::: : :: ::::  :: 
b28410 GTTGAGGGTATGCAGTTCGATCGTGGTTACCTCTCTGGTTACTTCGTAACAGATACAGAT
       300       310       320       330       340       350       

       360       370       380       390       400       410       
b16820 AAGATGGAGTGCGTGATGGAGAACCCATACATCCTGATTTACGATAAGAAGATTTCAAAC
       ::::::::::: :  :::::::::::::: ::::: :: :::::::::::::::::::: 
b28410 AAGATGGAGTGTGATATGGAGAACCCATATATCCTCATCTACGATAAGAAGATTTCAAAT
       360       370       380       390       400       410       

       420       430       440       450       460       470       
b16820 ATCAAGGATTTCCTGCCTATTTTGCAGCCTGCTGCCGAGAGCGGACGCCCCTTGCTGGTA
        : ::::: :: :: :: ::: : ::::: ::::: ::::: :: :: :: ::: :::: 
b28410 GTTAAGGACTTTCTTCCAATTCTCCAGCCAGCTGCAGAGAGTGGTCGTCCATTGTTGGTC
       420       430       440       450       460       470       

       480       490       500       510       520       530       
b16820 ATCGCCGAGGATGTTGATTCTGAGGCTCTTACCACACTGGTAGTAAACCGTCTGCGTGGT
       :: :: ::::::::::: :: :::::  : :: ::: :::: ::::::::::: ::::  
b28410 ATTGCAGAGGATGTTGACTCAGAGGCATTGACAACATTGGTTGTAAACCGTCTTCGTGCA
       480       490       500       510       520       530       

       540       550        
b16820 GGTCTGAAGATCTGTGCTGTT
       ::: ::::::: :::::::::
b28410 GGTTTGAAGATTTGTGCTGTT
       540       550        

</pre>
<hr>
<A name=b14417>
<pre>
>><a onClick="window.open('getRecord.php?id=b14417',
                                'cpndb_record'); return false;" href="getRecord.php?id=b14417" target=_"blank">b14417</a> CP002122 Prevotella melaninogenica ATCC 25845    (558 nt)
 initn: 1638 init1: 1638 opt: 1728  Z-score: 79.1  bits: 24.5 E(): 2.5e+02
banded Smith-Waterman score: 1728; 79.1% identity (79.1% similar) in 561 nt overlap (1-558:1-558)
<p>

               10        20        30        40        50        60
b16820 GCTACCATCCTGGCTCAGGCTATCGTATCAGAGGGCTTGAAGAACGTTACCGCTGGTGCT
       ::::: :::::  : ::::: :: ::  : :: :: :::::::: ::::: :: ::::: 
b14417 GCTACTATCCTCACACAGGCAATTGTTACTGAAGGATTGAAGAATGTTACAGCAGGTGCA
               10        20        30        40        50        60

               70        80        90          100       110       
b16820 AACCCCATGGACCTGAAGCGTGGTATCGACAAGGCTGT---TAAGGCTGTTACTGAGCAC
       ::::: :::::::: :::::::::::::::::::::::   ::::: :::   ::: :: 
b14417 AACCCAATGGACCTTAAGCGTGGTATCGACAAGGCTGTAGCTAAGGTTGT---TGATCAT
               70        80        90       100       110          

       120       130       140       150       160       170       
b16820 ATTGCTAAGAGCGCCGAGCAGGTTGGCGACAACTACGATAAGATCGAGCAGGTAGCTACC
       :::         :: :::   ::::: :::::::: :: ::::: :::::::::::::: 
b14417 ATTAAGGCTTCTGCAGAGGTAGTTGGTGACAACTATGACAAGATAGAGCAGGTAGCTACT
       120       130       140       150       160       170       

       180       190       200       210       220       230       
b16820 GTATCTGCCAACAACGATAAGGAGATTGGTGAGCTGCTGGCCGAGGCTATGCGTAAGGTA
       :::  ::: :::::::::   :: :: ::: :: :::: :: :: :::::::::::::::
b14417 GTAAGTGCTAACAACGATCCTGAAATAGGTAAGTTGCTTGCAGATGCTATGCGTAAGGTA
       180       190       200       210       220       230       

       240       250       260       270       280       290       
b16820 TCTAAGGATGGTGTGATCACTATCGAGGAGAGCAAGAGCCGCGACACACACATTGGTGTA
       :::::::::::::: :::::::: :: ::::::::::  :: :: :::   :: ::::: 
b14417 TCTAAGGATGGTGTTATCACTATTGAAGAGAGCAAGACTCGTGAGACAAGTATCGGTGTT
       240       250       260       270       280       290       

       300       310       320       330       340       350       
b16820 GTTGAGGGTATGCAGTTCGATCGTGGTTACCTGTCAGCTTACTTCATCACCGATAGCGAG
       ::::::::::::::::: :::::::::::::: :: : ::::::: : :: ::::  :: 
b14417 GTTGAGGGTATGCAGTTTGATCGTGGTTACCTCTCTGGTTACTTCGTAACAGATACAGAT
       300       310       320       330       340       350       

       360       370       380       390       400       410       
b16820 AAGATGGAGTGCGTGATGGAGAACCCATACATCCTGATTTACGATAAGAAGATTTCAAAC
       ::::::::::: :  :::::::::::::: ::::: :: :::::::::::::::::::::
b14417 AAGATGGAGTGTGATATGGAGAACCCATATATCCTCATCTACGATAAGAAGATTTCAAAC
       360       370       380       390       400       410       

       420       430       440       450       460       470       
b16820 ATCAAGGATTTCCTGCCTATTTTGCAGCCTGCTGCCGAGAGCGGACGCCCCTTGCTGGTA
        : ::::: ::::: :: ::  : ::::: ::::: ::::: :: :: :: ::  :::: 
b14417 GTTAAGGACTTCCTTCCAATCCTACAGCCAGCTGCTGAGAGTGGTCGTCCATTATTGGTC
       420       430       440       450       460       470       

       480       490       500       510       520       530       
b16820 ATCGCCGAGGATGTTGATTCTGAGGCTCTTACCACACTGGTAGTAAACCGTCTGCGTGGT
       :: :: ::::::::::: :: :::::  : :: ::: :::: ::::::::::: ::::  
b14417 ATTGCAGAGGATGTTGACTCAGAGGCATTGACAACATTGGTTGTAAACCGTCTTCGTGCA
       480       490       500       510       520       530       

       540       550        
b16820 GGTCTGAAGATCTGTGCTGTT
       ::: ::::::: :::::::::
b14417 GGTTTGAAGATTTGTGCTGTT
       540       550        

</pre>
<hr>
<p><pre>


558 residues in 1 query   sequences
10433008 residues in 18820 library sequences
 Scomplib [35.03]
 start: Mon Jun 24 02:58:56 2024 done: Mon Jun 24 02:58:57 2024
 Total Scan time:  1.510 Total Display time:  0.010

Function used was FASTA [version 35.03 Feb. 18, 2008]
</pre>