/var/www/html/cpndb/fasta_results/b15893.fasta# /data/www/cpndb/fasta35 -E 200 -Q -m 6 -b 20 -d 20 -z 2 -H /data/www/cpndb/fasta_results/b15893 /data/www/cpndb/blastDBs/reference_a_nut
<pre>
FASTA searches a protein or DNA sequence data bank
 version 35.03 Feb. 18, 2008
Please cite:
 W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

</pre>
Query: /data/www/cpndb/fasta_results/b15893
<pre>
  1>>>b15893 552 nt - 552 nt
Library: /data/www/cpndb/blastDBs/reference_a_nut 10433008 residues in 18820 sequences

10433008 residues in 18820 sequences
Statistics: MLE_cen statistics: Lambda= 0.0028;  K=1.045e-05 (cen=941)
Algorithm: FASTA (3.5 Sept 2006) [optimized]
Parameters: +5/-4 matrix (5:-4) ktup: 6
 join: 51, opt: 36, open/ext: -12/-4, width:  16
 Scan time:  2.110
</pre>
<p>
<hr>
<p>
<p><pre>

The best scores are:                                      opt bits E(18820)
<a onClick="window.open('getRecord.php?id=b27772',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27772" target=_"blank">b27772</a> ATBD01000093 Lactococcus  lactis  subsp ( 552) [f] 2742 27.7      26 <A HREF="#b27772">align</A>
<a onClick="window.open('getRecord.php?id=b28255',
                                'cpndb_record'); return false;" href="getRecord.php?id=b28255" target=_"blank">b28255</a> NC_022593 Lactococcus  lactis  subsp. l ( 552) [f] 2742 27.7      26 <A HREF="#b28255">align</A>
<a onClick="window.open('getRecord.php?id=b28417',
                                'cpndb_record'); return false;" href="getRecord.php?id=b28417" target=_"blank">b28417</a> CP006766 Lactococcus  lactis  subsp. la ( 552) [f] 2742 27.7      26 <A HREF="#b28417">align</A>
<a onClick="window.open('getRecord.php?id=b18690',
                                'cpndb_record'); return false;" href="getRecord.php?id=b18690" target=_"blank">b18690</a> CP002365 Lactococcus lactis subsp. lact ( 552) [f] 2742 27.7      26 <A HREF="#b18690">align</A>
<a onClick="window.open('getRecord.php?id=b434',
                                'cpndb_record'); return false;" href="getRecord.php?id=b434" target=_"blank">b434</a> X71132 Lactococcus lactis subsp. lactis i ( 552) [f] 2742 27.7      26 <A HREF="#b434">align</A>
<a onClick="window.open('getRecord.php?id=b27771',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27771" target=_"blank">b27771</a> ATBF01000005 Lactococcus  lactis  subsp ( 552) [f] 2742 27.7      26 <A HREF="#b27771">align</A>
<a onClick="window.open('getRecord.php?id=b28276',
                                'cpndb_record'); return false;" href="getRecord.php?id=b28276" target=_"blank">b28276</a> NZ_CBLU010000005 Lactococcus  lactis  s ( 552) [f] 2742 27.7      26 <A HREF="#b28276">align</A>
<a onClick="window.open('getRecord.php?id=b1330',
                                'cpndb_record'); return false;" href="getRecord.php?id=b1330" target=_"blank">b1330</a> NC_002662 Lactococcus lactis subsp. lact ( 552) [f] 2742 27.7      26 <A HREF="#b1330">align</A>
<a onClick="window.open('getRecord.php?id=b831',
                                'cpndb_record'); return false;" href="getRecord.php?id=b831" target=_"blank">b831</a> AF245673 Lactococcus lactis ATCC 19435    ( 552) [f] 2733 27.7      27 <A HREF="#b831">align</A>
<a onClick="window.open('getRecord.php?id=b28080',
                                'cpndb_record'); return false;" href="getRecord.php?id=b28080" target=_"blank">b28080</a> CBUJ010000016 Lactococcus lactis  subsp ( 552) [f] 2733 27.7      27 <A HREF="#b28080">align</A>
<a onClick="window.open('getRecord.php?id=b20557',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20557" target=_"blank">b20557</a> AP012281 Lactococcus lactis subsp. lact ( 552) [f] 2715 27.6      28 <A HREF="#b20557">align</A>
<a onClick="window.open('getRecord.php?id=b27777',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27777" target=_"blank">b27777</a> ATBC01000278 Lactobacillus  lactis  sub ( 552) [f] 2391 26.3      70 <A HREF="#b27777">align</A>
<a onClick="window.open('getRecord.php?id=b1090',
                                'cpndb_record'); return false;" href="getRecord.php?id=b1090" target=_"blank">b1090</a> AY029215 Lactococcus lactis subsp. cremo ( 552) [f] 2391 26.3      70 <A HREF="#b1090">align</A>
<a onClick="window.open('getRecord.php?id=b27775',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27775" target=_"blank">b27775</a> ASXF01000176 Lactococcus lactis  subsp. ( 552) [f] 2391 26.3      70 <A HREF="#b27775">align</A>
<a onClick="window.open('getRecord.php?id=b17517',
                                'cpndb_record'); return false;" href="getRecord.php?id=b17517" target=_"blank">b17517</a> CP002094 Lactococcus lactis subsp. crem ( 552) [f] 2391 26.3      70 <A HREF="#b17517">align</A>
<a onClick="window.open('getRecord.php?id=b27902',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27902" target=_"blank">b27902</a> NC_022369 Lactococcus  lactis  subsp. c ( 552) [f] 2391 26.3      70 <A HREF="#b27902">align</A>
<a onClick="window.open('getRecord.php?id=b21805',
                                'cpndb_record'); return false;" href="getRecord.php?id=b21805" target=_"blank">b21805</a> NC_019435 Lactococcus lactis subsp. cre ( 552) [f] 2382 26.3      72 <A HREF="#b21805">align</A>
<a onClick="window.open('getRecord.php?id=b20086',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20086" target=_"blank">b20086</a> CP003132 Lactococcus lactis subsp. crem ( 552) [f] 2382 26.3      72 <A HREF="#b20086">align</A>
<a onClick="window.open('getRecord.php?id=b27773',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27773" target=_"blank">b27773</a> ATBA01000157 Lactococcus  lactis  subsp ( 552) [f] 2382 26.3      72 <A HREF="#b27773">align</A>
<a onClick="window.open('getRecord.php?id=b7507',
                                'cpndb_record'); return false;" href="getRecord.php?id=b7507" target=_"blank">b7507</a> CP000425 Lactococcus lactis subsp. cremo ( 552) [f] 2382 26.3      72 <A HREF="#b7507">align</A>
</pre><p><hr><p>

>>>b15893, 552 nt vs /data/www/cpndb/blastDBs/reference_a_nut library

<A name=b27772>
<pre>
>><a onClick="window.open('getRecord.php?id=b27772',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27772" target=_"blank">b27772</a> ATBD01000093 Lactococcus  lactis  subsp. lactis  (552 nt)
 initn: 2742 init1: 2742 opt: 2742  Z-score: 96.9  bits: 27.7 E():   26
banded Smith-Waterman score: 2742; 99.6% identity (99.6% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15893 GCGACAGTTTTGACACAAGCTATTGTTCGTGAAGGTTTAAAAAATGTTACCGCAGGTGCA
       ::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::
b27772 GCGACAGTTTTGACACAAGCTATCGTTCGTGAAGGTTTAAAAAATGTTACCGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b15893 AATCCAGTTGGTATTCGCCGAGGAATTGAACTTGCTGCTGAAACAGCTGTTTCGTCAATT
       ::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::
b27772 AATCCAGTTGGTATTCGCCGAGGAATTGAACTTGCTGCTGAAACAGCTGTTGCGTCAATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b15893 AAAGAGATGGCAATTCCTGTCCACGATAAATCAGCAATTGCGCAAGTAGCTACCGTTTCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27772 AAAGAGATGGCAATTCCTGTCCACGATAAATCAGCAATTGCGCAAGTAGCTACCGTTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b15893 TCACGTAGTGAAAAAGTGGGTGAGTATATTTCTGATGCAATGGAACGTGTAGGTTCTGAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27772 TCACGTAGTGAAAAAGTGGGTGAGTATATTTCTGATGCAATGGAACGTGTAGGTTCTGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b15893 GGAGTTATCACCATTGAAGAATCAAAAGGGATGCAAACTGAACTCGATGTTGTTGAAGGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27772 GGAGTTATCACCATTGAAGAATCAAAAGGGATGCAAACTGAACTCGATGTTGTTGAAGGA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15893 ATGCAATTTGACCGTGGATATTTGAGTCAATATATGGTTTCTAATACAGAAAAAATGGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27772 ATGCAATTTGACCGTGGATATTTGAGTCAATATATGGTTTCTAATACAGAAAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b15893 GCTGAATTAGATAATCCTTATATTCTTATTACCGACAAAAAAATCTCAAACATTCAAGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27772 GCTGAATTAGATAATCCTTATATTCTTATTACCGACAAAAAAATCTCAAACATTCAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15893 ATTTTACCGCTCCTTGAACAAATCTTGAAAACAAATCGTCCACTTCTTATTGTAGCTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27772 ATTTTACCGCTCCTTGAACAAATCTTGAAAACAAATCGTCCACTTCTTATTGTAGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b15893 GATGTTGATGGAGAAGCATTGCCAACGCTTGTTCTTAATAAGATTAAAGGTGTCTTCAAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27772 GATGTTGATGGAGAAGCATTGCCAACGCTTGTTCTTAATAAGATTAAAGGTGTCTTCAAT
              490       500       510       520       530       540

              550  
b15893 GTTGTAGCTGTA
       ::::::::::::
b27772 GTTGTAGCTGTA
              550  

</pre>
<hr>
<A name=b28255>
<pre>
>><a onClick="window.open('getRecord.php?id=b28255',
                                'cpndb_record'); return false;" href="getRecord.php?id=b28255" target=_"blank">b28255</a> NC_022593 Lactococcus  lactis  subsp. lactis KL  (552 nt)
 initn: 2742 init1: 2742 opt: 2742  Z-score: 96.9  bits: 27.7 E():   26
banded Smith-Waterman score: 2742; 99.6% identity (99.6% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15893 GCGACAGTTTTGACACAAGCTATTGTTCGTGAAGGTTTAAAAAATGTTACCGCAGGTGCA
       ::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::
b28255 GCGACAGTTTTGACACAAGCTATCGTTCGTGAAGGTTTAAAAAATGTTACCGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b15893 AATCCAGTTGGTATTCGCCGAGGAATTGAACTTGCTGCTGAAACAGCTGTTTCGTCAATT
       ::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::
b28255 AATCCAGTTGGTATTCGCCGAGGAATTGAACTTGCTGCTGAAACAGCTGTTGCGTCAATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b15893 AAAGAGATGGCAATTCCTGTCCACGATAAATCAGCAATTGCGCAAGTAGCTACCGTTTCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28255 AAAGAGATGGCAATTCCTGTCCACGATAAATCAGCAATTGCGCAAGTAGCTACCGTTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b15893 TCACGTAGTGAAAAAGTGGGTGAGTATATTTCTGATGCAATGGAACGTGTAGGTTCTGAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28255 TCACGTAGTGAAAAAGTGGGTGAGTATATTTCTGATGCAATGGAACGTGTAGGTTCTGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b15893 GGAGTTATCACCATTGAAGAATCAAAAGGGATGCAAACTGAACTCGATGTTGTTGAAGGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28255 GGAGTTATCACCATTGAAGAATCAAAAGGGATGCAAACTGAACTCGATGTTGTTGAAGGA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15893 ATGCAATTTGACCGTGGATATTTGAGTCAATATATGGTTTCTAATACAGAAAAAATGGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28255 ATGCAATTTGACCGTGGATATTTGAGTCAATATATGGTTTCTAATACAGAAAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b15893 GCTGAATTAGATAATCCTTATATTCTTATTACCGACAAAAAAATCTCAAACATTCAAGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28255 GCTGAATTAGATAATCCTTATATTCTTATTACCGACAAAAAAATCTCAAACATTCAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15893 ATTTTACCGCTCCTTGAACAAATCTTGAAAACAAATCGTCCACTTCTTATTGTAGCTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28255 ATTTTACCGCTCCTTGAACAAATCTTGAAAACAAATCGTCCACTTCTTATTGTAGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b15893 GATGTTGATGGAGAAGCATTGCCAACGCTTGTTCTTAATAAGATTAAAGGTGTCTTCAAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28255 GATGTTGATGGAGAAGCATTGCCAACGCTTGTTCTTAATAAGATTAAAGGTGTCTTCAAT
              490       500       510       520       530       540

              550  
b15893 GTTGTAGCTGTA
       ::::::::::::
b28255 GTTGTAGCTGTA
              550  

</pre>
<hr>
<A name=b28417>
<pre>
>><a onClick="window.open('getRecord.php?id=b28417',
                                'cpndb_record'); return false;" href="getRecord.php?id=b28417" target=_"blank">b28417</a> CP006766 Lactococcus  lactis  subsp. lactis KLD  (552 nt)
 initn: 2742 init1: 2742 opt: 2742  Z-score: 96.9  bits: 27.7 E():   26
banded Smith-Waterman score: 2742; 99.6% identity (99.6% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15893 GCGACAGTTTTGACACAAGCTATTGTTCGTGAAGGTTTAAAAAATGTTACCGCAGGTGCA
       ::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::
b28417 GCGACAGTTTTGACACAAGCTATCGTTCGTGAAGGTTTAAAAAATGTTACCGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b15893 AATCCAGTTGGTATTCGCCGAGGAATTGAACTTGCTGCTGAAACAGCTGTTTCGTCAATT
       ::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::
b28417 AATCCAGTTGGTATTCGCCGAGGAATTGAACTTGCTGCTGAAACAGCTGTTGCGTCAATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b15893 AAAGAGATGGCAATTCCTGTCCACGATAAATCAGCAATTGCGCAAGTAGCTACCGTTTCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28417 AAAGAGATGGCAATTCCTGTCCACGATAAATCAGCAATTGCGCAAGTAGCTACCGTTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b15893 TCACGTAGTGAAAAAGTGGGTGAGTATATTTCTGATGCAATGGAACGTGTAGGTTCTGAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28417 TCACGTAGTGAAAAAGTGGGTGAGTATATTTCTGATGCAATGGAACGTGTAGGTTCTGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b15893 GGAGTTATCACCATTGAAGAATCAAAAGGGATGCAAACTGAACTCGATGTTGTTGAAGGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28417 GGAGTTATCACCATTGAAGAATCAAAAGGGATGCAAACTGAACTCGATGTTGTTGAAGGA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15893 ATGCAATTTGACCGTGGATATTTGAGTCAATATATGGTTTCTAATACAGAAAAAATGGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28417 ATGCAATTTGACCGTGGATATTTGAGTCAATATATGGTTTCTAATACAGAAAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b15893 GCTGAATTAGATAATCCTTATATTCTTATTACCGACAAAAAAATCTCAAACATTCAAGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28417 GCTGAATTAGATAATCCTTATATTCTTATTACCGACAAAAAAATCTCAAACATTCAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15893 ATTTTACCGCTCCTTGAACAAATCTTGAAAACAAATCGTCCACTTCTTATTGTAGCTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28417 ATTTTACCGCTCCTTGAACAAATCTTGAAAACAAATCGTCCACTTCTTATTGTAGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b15893 GATGTTGATGGAGAAGCATTGCCAACGCTTGTTCTTAATAAGATTAAAGGTGTCTTCAAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28417 GATGTTGATGGAGAAGCATTGCCAACGCTTGTTCTTAATAAGATTAAAGGTGTCTTCAAT
              490       500       510       520       530       540

              550  
b15893 GTTGTAGCTGTA
       ::::::::::::
b28417 GTTGTAGCTGTA
              550  

</pre>
<hr>
<A name=b18690>
<pre>
>><a onClick="window.open('getRecord.php?id=b18690',
                                'cpndb_record'); return false;" href="getRecord.php?id=b18690" target=_"blank">b18690</a> CP002365 Lactococcus lactis subsp. lactis CV56   (552 nt)
 initn: 2742 init1: 2742 opt: 2742  Z-score: 96.9  bits: 27.7 E():   26
banded Smith-Waterman score: 2742; 99.6% identity (99.6% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15893 GCGACAGTTTTGACACAAGCTATTGTTCGTGAAGGTTTAAAAAATGTTACCGCAGGTGCA
       ::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::
b18690 GCGACAGTTTTGACACAAGCTATCGTTCGTGAAGGTTTAAAAAATGTTACCGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b15893 AATCCAGTTGGTATTCGCCGAGGAATTGAACTTGCTGCTGAAACAGCTGTTTCGTCAATT
       ::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::
b18690 AATCCAGTTGGTATTCGCCGAGGAATTGAACTTGCTGCTGAAACAGCTGTTGCGTCAATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b15893 AAAGAGATGGCAATTCCTGTCCACGATAAATCAGCAATTGCGCAAGTAGCTACCGTTTCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18690 AAAGAGATGGCAATTCCTGTCCACGATAAATCAGCAATTGCGCAAGTAGCTACCGTTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b15893 TCACGTAGTGAAAAAGTGGGTGAGTATATTTCTGATGCAATGGAACGTGTAGGTTCTGAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18690 TCACGTAGTGAAAAAGTGGGTGAGTATATTTCTGATGCAATGGAACGTGTAGGTTCTGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b15893 GGAGTTATCACCATTGAAGAATCAAAAGGGATGCAAACTGAACTCGATGTTGTTGAAGGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18690 GGAGTTATCACCATTGAAGAATCAAAAGGGATGCAAACTGAACTCGATGTTGTTGAAGGA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15893 ATGCAATTTGACCGTGGATATTTGAGTCAATATATGGTTTCTAATACAGAAAAAATGGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18690 ATGCAATTTGACCGTGGATATTTGAGTCAATATATGGTTTCTAATACAGAAAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b15893 GCTGAATTAGATAATCCTTATATTCTTATTACCGACAAAAAAATCTCAAACATTCAAGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18690 GCTGAATTAGATAATCCTTATATTCTTATTACCGACAAAAAAATCTCAAACATTCAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15893 ATTTTACCGCTCCTTGAACAAATCTTGAAAACAAATCGTCCACTTCTTATTGTAGCTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18690 ATTTTACCGCTCCTTGAACAAATCTTGAAAACAAATCGTCCACTTCTTATTGTAGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b15893 GATGTTGATGGAGAAGCATTGCCAACGCTTGTTCTTAATAAGATTAAAGGTGTCTTCAAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18690 GATGTTGATGGAGAAGCATTGCCAACGCTTGTTCTTAATAAGATTAAAGGTGTCTTCAAT
              490       500       510       520       530       540

              550  
b15893 GTTGTAGCTGTA
       ::::::::::::
b18690 GTTGTAGCTGTA
              550  

</pre>
<hr>
<A name=b434>
<pre>
>><a onClick="window.open('getRecord.php?id=b434',
                                'cpndb_record'); return false;" href="getRecord.php?id=b434" target=_"blank">b434</a> X71132 Lactococcus lactis subsp. lactis isolate C  (552 nt)
 initn: 2742 init1: 2742 opt: 2742  Z-score: 96.9  bits: 27.7 E():   26
banded Smith-Waterman score: 2742; 99.6% identity (99.6% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15893 GCGACAGTTTTGACACAAGCTATTGTTCGTGAAGGTTTAAAAAATGTTACCGCAGGTGCA
       ::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::
b434   GCGACAGTTTTGACACAAGCTATCGTTCGTGAAGGTTTAAAAAATGTTACCGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b15893 AATCCAGTTGGTATTCGCCGAGGAATTGAACTTGCTGCTGAAACAGCTGTTTCGTCAATT
       ::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::
b434   AATCCAGTTGGTATTCGCCGAGGAATTGAACTTGCTGCTGAAACAGCTGTTGCGTCAATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b15893 AAAGAGATGGCAATTCCTGTCCACGATAAATCAGCAATTGCGCAAGTAGCTACCGTTTCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b434   AAAGAGATGGCAATTCCTGTCCACGATAAATCAGCAATTGCGCAAGTAGCTACCGTTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b15893 TCACGTAGTGAAAAAGTGGGTGAGTATATTTCTGATGCAATGGAACGTGTAGGTTCTGAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b434   TCACGTAGTGAAAAAGTGGGTGAGTATATTTCTGATGCAATGGAACGTGTAGGTTCTGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b15893 GGAGTTATCACCATTGAAGAATCAAAAGGGATGCAAACTGAACTCGATGTTGTTGAAGGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b434   GGAGTTATCACCATTGAAGAATCAAAAGGGATGCAAACTGAACTCGATGTTGTTGAAGGA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15893 ATGCAATTTGACCGTGGATATTTGAGTCAATATATGGTTTCTAATACAGAAAAAATGGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b434   ATGCAATTTGACCGTGGATATTTGAGTCAATATATGGTTTCTAATACAGAAAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b15893 GCTGAATTAGATAATCCTTATATTCTTATTACCGACAAAAAAATCTCAAACATTCAAGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b434   GCTGAATTAGATAATCCTTATATTCTTATTACCGACAAAAAAATCTCAAACATTCAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15893 ATTTTACCGCTCCTTGAACAAATCTTGAAAACAAATCGTCCACTTCTTATTGTAGCTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b434   ATTTTACCGCTCCTTGAACAAATCTTGAAAACAAATCGTCCACTTCTTATTGTAGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b15893 GATGTTGATGGAGAAGCATTGCCAACGCTTGTTCTTAATAAGATTAAAGGTGTCTTCAAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b434   GATGTTGATGGAGAAGCATTGCCAACGCTTGTTCTTAATAAGATTAAAGGTGTCTTCAAT
              490       500       510       520       530       540

              550  
b15893 GTTGTAGCTGTA
       ::::::::::::
b434   GTTGTAGCTGTA
              550  

</pre>
<hr>
<A name=b27771>
<pre>
>><a onClick="window.open('getRecord.php?id=b27771',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27771" target=_"blank">b27771</a> ATBF01000005 Lactococcus  lactis  subsp. lactis  (552 nt)
 initn: 2742 init1: 2742 opt: 2742  Z-score: 96.9  bits: 27.7 E():   26
banded Smith-Waterman score: 2742; 99.6% identity (99.6% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15893 GCGACAGTTTTGACACAAGCTATTGTTCGTGAAGGTTTAAAAAATGTTACCGCAGGTGCA
       ::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::
b27771 GCGACAGTTTTGACACAAGCTATCGTTCGTGAAGGTTTAAAAAATGTTACCGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b15893 AATCCAGTTGGTATTCGCCGAGGAATTGAACTTGCTGCTGAAACAGCTGTTTCGTCAATT
       ::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::
b27771 AATCCAGTTGGTATTCGCCGAGGAATTGAACTTGCTGCTGAAACAGCTGTTGCGTCAATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b15893 AAAGAGATGGCAATTCCTGTCCACGATAAATCAGCAATTGCGCAAGTAGCTACCGTTTCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27771 AAAGAGATGGCAATTCCTGTCCACGATAAATCAGCAATTGCGCAAGTAGCTACCGTTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b15893 TCACGTAGTGAAAAAGTGGGTGAGTATATTTCTGATGCAATGGAACGTGTAGGTTCTGAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27771 TCACGTAGTGAAAAAGTGGGTGAGTATATTTCTGATGCAATGGAACGTGTAGGTTCTGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b15893 GGAGTTATCACCATTGAAGAATCAAAAGGGATGCAAACTGAACTCGATGTTGTTGAAGGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27771 GGAGTTATCACCATTGAAGAATCAAAAGGGATGCAAACTGAACTCGATGTTGTTGAAGGA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15893 ATGCAATTTGACCGTGGATATTTGAGTCAATATATGGTTTCTAATACAGAAAAAATGGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27771 ATGCAATTTGACCGTGGATATTTGAGTCAATATATGGTTTCTAATACAGAAAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b15893 GCTGAATTAGATAATCCTTATATTCTTATTACCGACAAAAAAATCTCAAACATTCAAGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27771 GCTGAATTAGATAATCCTTATATTCTTATTACCGACAAAAAAATCTCAAACATTCAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15893 ATTTTACCGCTCCTTGAACAAATCTTGAAAACAAATCGTCCACTTCTTATTGTAGCTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27771 ATTTTACCGCTCCTTGAACAAATCTTGAAAACAAATCGTCCACTTCTTATTGTAGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b15893 GATGTTGATGGAGAAGCATTGCCAACGCTTGTTCTTAATAAGATTAAAGGTGTCTTCAAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27771 GATGTTGATGGAGAAGCATTGCCAACGCTTGTTCTTAATAAGATTAAAGGTGTCTTCAAT
              490       500       510       520       530       540

              550  
b15893 GTTGTAGCTGTA
       ::::::::::::
b27771 GTTGTAGCTGTA
              550  

</pre>
<hr>
<A name=b28276>
<pre>
>><a onClick="window.open('getRecord.php?id=b28276',
                                'cpndb_record'); return false;" href="getRecord.php?id=b28276" target=_"blank">b28276</a> NZ_CBLU010000005 Lactococcus  lactis  subsp. la  (552 nt)
 initn: 2742 init1: 2742 opt: 2742  Z-score: 96.9  bits: 27.7 E():   26
banded Smith-Waterman score: 2742; 99.6% identity (99.6% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15893 GCGACAGTTTTGACACAAGCTATTGTTCGTGAAGGTTTAAAAAATGTTACCGCAGGTGCA
       ::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::
b28276 GCGACAGTTTTGACACAAGCTATCGTTCGTGAAGGTTTAAAAAATGTTACCGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b15893 AATCCAGTTGGTATTCGCCGAGGAATTGAACTTGCTGCTGAAACAGCTGTTTCGTCAATT
       ::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::
b28276 AATCCAGTTGGTATTCGCCGAGGAATTGAACTTGCTGCTGAAACAGCTGTTGCGTCAATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b15893 AAAGAGATGGCAATTCCTGTCCACGATAAATCAGCAATTGCGCAAGTAGCTACCGTTTCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28276 AAAGAGATGGCAATTCCTGTCCACGATAAATCAGCAATTGCGCAAGTAGCTACCGTTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b15893 TCACGTAGTGAAAAAGTGGGTGAGTATATTTCTGATGCAATGGAACGTGTAGGTTCTGAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28276 TCACGTAGTGAAAAAGTGGGTGAGTATATTTCTGATGCAATGGAACGTGTAGGTTCTGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b15893 GGAGTTATCACCATTGAAGAATCAAAAGGGATGCAAACTGAACTCGATGTTGTTGAAGGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28276 GGAGTTATCACCATTGAAGAATCAAAAGGGATGCAAACTGAACTCGATGTTGTTGAAGGA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15893 ATGCAATTTGACCGTGGATATTTGAGTCAATATATGGTTTCTAATACAGAAAAAATGGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28276 ATGCAATTTGACCGTGGATATTTGAGTCAATATATGGTTTCTAATACAGAAAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b15893 GCTGAATTAGATAATCCTTATATTCTTATTACCGACAAAAAAATCTCAAACATTCAAGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28276 GCTGAATTAGATAATCCTTATATTCTTATTACCGACAAAAAAATCTCAAACATTCAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15893 ATTTTACCGCTCCTTGAACAAATCTTGAAAACAAATCGTCCACTTCTTATTGTAGCTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28276 ATTTTACCGCTCCTTGAACAAATCTTGAAAACAAATCGTCCACTTCTTATTGTAGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b15893 GATGTTGATGGAGAAGCATTGCCAACGCTTGTTCTTAATAAGATTAAAGGTGTCTTCAAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28276 GATGTTGATGGAGAAGCATTGCCAACGCTTGTTCTTAATAAGATTAAAGGTGTCTTCAAT
              490       500       510       520       530       540

              550  
b15893 GTTGTAGCTGTA
       ::::::::::::
b28276 GTTGTAGCTGTA
              550  

</pre>
<hr>
<A name=b1330>
<pre>
>><a onClick="window.open('getRecord.php?id=b1330',
                                'cpndb_record'); return false;" href="getRecord.php?id=b1330" target=_"blank">b1330</a> NC_002662 Lactococcus lactis subsp. lactis IL140  (552 nt)
 initn: 2742 init1: 2742 opt: 2742  Z-score: 96.9  bits: 27.7 E():   26
banded Smith-Waterman score: 2742; 99.6% identity (99.6% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15893 GCGACAGTTTTGACACAAGCTATTGTTCGTGAAGGTTTAAAAAATGTTACCGCAGGTGCA
       ::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::
b1330  GCGACAGTTTTGACACAAGCTATCGTTCGTGAAGGTTTAAAAAATGTTACCGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b15893 AATCCAGTTGGTATTCGCCGAGGAATTGAACTTGCTGCTGAAACAGCTGTTTCGTCAATT
       ::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::
b1330  AATCCAGTTGGTATTCGCCGAGGAATTGAACTTGCTGCTGAAACAGCTGTTGCGTCAATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b15893 AAAGAGATGGCAATTCCTGTCCACGATAAATCAGCAATTGCGCAAGTAGCTACCGTTTCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1330  AAAGAGATGGCAATTCCTGTCCACGATAAATCAGCAATTGCGCAAGTAGCTACCGTTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b15893 TCACGTAGTGAAAAAGTGGGTGAGTATATTTCTGATGCAATGGAACGTGTAGGTTCTGAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1330  TCACGTAGTGAAAAAGTGGGTGAGTATATTTCTGATGCAATGGAACGTGTAGGTTCTGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b15893 GGAGTTATCACCATTGAAGAATCAAAAGGGATGCAAACTGAACTCGATGTTGTTGAAGGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1330  GGAGTTATCACCATTGAAGAATCAAAAGGGATGCAAACTGAACTCGATGTTGTTGAAGGA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15893 ATGCAATTTGACCGTGGATATTTGAGTCAATATATGGTTTCTAATACAGAAAAAATGGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1330  ATGCAATTTGACCGTGGATATTTGAGTCAATATATGGTTTCTAATACAGAAAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b15893 GCTGAATTAGATAATCCTTATATTCTTATTACCGACAAAAAAATCTCAAACATTCAAGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1330  GCTGAATTAGATAATCCTTATATTCTTATTACCGACAAAAAAATCTCAAACATTCAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15893 ATTTTACCGCTCCTTGAACAAATCTTGAAAACAAATCGTCCACTTCTTATTGTAGCTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1330  ATTTTACCGCTCCTTGAACAAATCTTGAAAACAAATCGTCCACTTCTTATTGTAGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b15893 GATGTTGATGGAGAAGCATTGCCAACGCTTGTTCTTAATAAGATTAAAGGTGTCTTCAAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1330  GATGTTGATGGAGAAGCATTGCCAACGCTTGTTCTTAATAAGATTAAAGGTGTCTTCAAT
              490       500       510       520       530       540

              550  
b15893 GTTGTAGCTGTA
       ::::::::::::
b1330  GTTGTAGCTGTA
              550  

</pre>
<hr>
<A name=b831>
<pre>
>><a onClick="window.open('getRecord.php?id=b831',
                                'cpndb_record'); return false;" href="getRecord.php?id=b831" target=_"blank">b831</a> AF245673 Lactococcus lactis ATCC 19435             (552 nt)
 initn: 2733 init1: 2733 opt: 2733  Z-score: 96.7  bits: 27.7 E():   27
banded Smith-Waterman score: 2733; 99.5% identity (99.5% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15893 GCGACAGTTTTGACACAAGCTATTGTTCGTGAAGGTTTAAAAAATGTTACCGCAGGTGCA
       ::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::
b831   GCGACAGTTTTGACACAAGCTATCGTTCGTGAAGGTTTAAAAAATGTTACCGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b15893 AATCCAGTTGGTATTCGCCGAGGAATTGAACTTGCTGCTGAAACAGCTGTTTCGTCAATT
       ::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::
b831   AATCCAGTTGGTATTCGCCGAGGAATTGAACTTGCTGCTGAAACAGCTGTTGCGTCAATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b15893 AAAGAGATGGCAATTCCTGTCCACGATAAATCAGCAATTGCGCAAGTAGCTACCGTTTCA
       :::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::
b831   AAAGAGATAGCAATTCCTGTCCACGATAAATCAGCAATTGCGCAAGTAGCTACCGTTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b15893 TCACGTAGTGAAAAAGTGGGTGAGTATATTTCTGATGCAATGGAACGTGTAGGTTCTGAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b831   TCACGTAGTGAAAAAGTGGGTGAGTATATTTCTGATGCAATGGAACGTGTAGGTTCTGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b15893 GGAGTTATCACCATTGAAGAATCAAAAGGGATGCAAACTGAACTCGATGTTGTTGAAGGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b831   GGAGTTATCACCATTGAAGAATCAAAAGGGATGCAAACTGAACTCGATGTTGTTGAAGGA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15893 ATGCAATTTGACCGTGGATATTTGAGTCAATATATGGTTTCTAATACAGAAAAAATGGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b831   ATGCAATTTGACCGTGGATATTTGAGTCAATATATGGTTTCTAATACAGAAAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b15893 GCTGAATTAGATAATCCTTATATTCTTATTACCGACAAAAAAATCTCAAACATTCAAGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b831   GCTGAATTAGATAATCCTTATATTCTTATTACCGACAAAAAAATCTCAAACATTCAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15893 ATTTTACCGCTCCTTGAACAAATCTTGAAAACAAATCGTCCACTTCTTATTGTAGCTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b831   ATTTTACCGCTCCTTGAACAAATCTTGAAAACAAATCGTCCACTTCTTATTGTAGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b15893 GATGTTGATGGAGAAGCATTGCCAACGCTTGTTCTTAATAAGATTAAAGGTGTCTTCAAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b831   GATGTTGATGGAGAAGCATTGCCAACGCTTGTTCTTAATAAGATTAAAGGTGTCTTCAAT
              490       500       510       520       530       540

              550  
b15893 GTTGTAGCTGTA
       ::::::::::::
b831   GTTGTAGCTGTA
              550  

</pre>
<hr>
<A name=b28080>
<pre>
>><a onClick="window.open('getRecord.php?id=b28080',
                                'cpndb_record'); return false;" href="getRecord.php?id=b28080" target=_"blank">b28080</a> CBUJ010000016 Lactococcus lactis  subsp. lactis  (552 nt)
 initn: 2733 init1: 2733 opt: 2733  Z-score: 96.7  bits: 27.7 E():   27
banded Smith-Waterman score: 2733; 99.5% identity (99.5% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15893 GCGACAGTTTTGACACAAGCTATTGTTCGTGAAGGTTTAAAAAATGTTACCGCAGGTGCA
       ::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::
b28080 GCGACAGTTTTGACACAAGCTATCGTTCGTGAAGGTTTAAAAAATGTTACCGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b15893 AATCCAGTTGGTATTCGCCGAGGAATTGAACTTGCTGCTGAAACAGCTGTTTCGTCAATT
       ::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::
b28080 AATCCAGTTGGTATTCGCCGAGGAATTGAACTTGCTGCTGAAACAGCTGTTGCGTCAATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b15893 AAAGAGATGGCAATTCCTGTCCACGATAAATCAGCAATTGCGCAAGTAGCTACCGTTTCA
       :::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::
b28080 AAAGAGATAGCAATTCCTGTCCACGATAAATCAGCAATTGCGCAAGTAGCTACCGTTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b15893 TCACGTAGTGAAAAAGTGGGTGAGTATATTTCTGATGCAATGGAACGTGTAGGTTCTGAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28080 TCACGTAGTGAAAAAGTGGGTGAGTATATTTCTGATGCAATGGAACGTGTAGGTTCTGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b15893 GGAGTTATCACCATTGAAGAATCAAAAGGGATGCAAACTGAACTCGATGTTGTTGAAGGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28080 GGAGTTATCACCATTGAAGAATCAAAAGGGATGCAAACTGAACTCGATGTTGTTGAAGGA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15893 ATGCAATTTGACCGTGGATATTTGAGTCAATATATGGTTTCTAATACAGAAAAAATGGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28080 ATGCAATTTGACCGTGGATATTTGAGTCAATATATGGTTTCTAATACAGAAAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b15893 GCTGAATTAGATAATCCTTATATTCTTATTACCGACAAAAAAATCTCAAACATTCAAGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28080 GCTGAATTAGATAATCCTTATATTCTTATTACCGACAAAAAAATCTCAAACATTCAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15893 ATTTTACCGCTCCTTGAACAAATCTTGAAAACAAATCGTCCACTTCTTATTGTAGCTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28080 ATTTTACCGCTCCTTGAACAAATCTTGAAAACAAATCGTCCACTTCTTATTGTAGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b15893 GATGTTGATGGAGAAGCATTGCCAACGCTTGTTCTTAATAAGATTAAAGGTGTCTTCAAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28080 GATGTTGATGGAGAAGCATTGCCAACGCTTGTTCTTAATAAGATTAAAGGTGTCTTCAAT
              490       500       510       520       530       540

              550  
b15893 GTTGTAGCTGTA
       ::::::::::::
b28080 GTTGTAGCTGTA
              550  

</pre>
<hr>
<A name=b20557>
<pre>
>><a onClick="window.open('getRecord.php?id=b20557',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20557" target=_"blank">b20557</a> AP012281 Lactococcus lactis subsp. lactis IO-1   (552 nt)
 initn: 2715 init1: 2715 opt: 2715  Z-score: 96.3  bits: 27.6 E():   28
banded Smith-Waterman score: 2715; 99.1% identity (99.1% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15893 GCGACAGTTTTGACACAAGCTATTGTTCGTGAAGGTTTAAAAAATGTTACCGCAGGTGCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20557 GCGACAGTTTTGACACAAGCTATTGTTCGTGAAGGTTTAAAAAATGTTACCGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b15893 AATCCAGTTGGTATTCGCCGAGGAATTGAACTTGCTGCTGAAACAGCTGTTTCGTCAATT
       ::::::::::::::::::::::::::::: ::::::::::: ::::::::: ::::::::
b20557 AATCCAGTTGGTATTCGCCGAGGAATTGAGCTTGCTGCTGAGACAGCTGTTGCGTCAATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b15893 AAAGAGATGGCAATTCCTGTCCACGATAAATCAGCAATTGCGCAAGTAGCTACCGTTTCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20557 AAAGAGATGGCAATTCCTGTCCACGATAAATCAGCAATTGCGCAAGTAGCTACCGTTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b15893 TCACGTAGTGAAAAAGTGGGTGAGTATATTTCTGATGCAATGGAACGTGTAGGTTCTGAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20557 TCACGTAGTGAAAAAGTGGGTGAGTATATTTCTGATGCAATGGAACGTGTAGGTTCTGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b15893 GGAGTTATCACCATTGAAGAATCAAAAGGGATGCAAACTGAACTCGATGTTGTTGAAGGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20557 GGAGTTATCACCATTGAAGAATCAAAAGGGATGCAAACTGAACTCGATGTTGTTGAAGGA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15893 ATGCAATTTGACCGTGGATATTTGAGTCAATATATGGTTTCTAATACAGAAAAAATGGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20557 ATGCAATTTGACCGTGGATATTTGAGTCAATATATGGTTTCTAATACAGAAAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b15893 GCTGAATTAGATAATCCTTATATTCTTATTACCGACAAAAAAATCTCAAACATTCAAGAA
       ::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20557 GCTGAGTTAGATAATCCTTATATTCTTATTACCGACAAAAAAATCTCAAACATTCAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15893 ATTTTACCGCTCCTTGAACAAATCTTGAAAACAAATCGTCCACTTCTTATTGTAGCTGAT
       :::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::
b20557 ATTTTACCTCTCCTTGAACAAATCTTGAAAACAAATCGTCCACTTCTTATTGTAGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b15893 GATGTTGATGGAGAAGCATTGCCAACGCTTGTTCTTAATAAGATTAAAGGTGTCTTCAAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20557 GATGTTGATGGAGAAGCATTGCCAACGCTTGTTCTTAATAAGATTAAAGGTGTCTTCAAT
              490       500       510       520       530       540

              550  
b15893 GTTGTAGCTGTA
       ::::::::::::
b20557 GTTGTAGCTGTA
              550  

</pre>
<hr>
<A name=b27777>
<pre>
>><a onClick="window.open('getRecord.php?id=b27777',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27777" target=_"blank">b27777</a> ATBC01000278 Lactobacillus  lactis  subsp. crem  (552 nt)
 initn: 2391 init1: 2391 opt: 2391  Z-score: 89.2  bits: 26.3 E():   70
banded Smith-Waterman score: 2391; 92.6% identity (92.6% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15893 GCGACAGTTTTGACACAAGCTATTGTTCGTGAAGGTTTAAAAAATGTTACCGCAGGTGCA
       ::::::::::::::::::::::::::::::::::: :: ::::::::::: :::::::::
b27777 GCGACAGTTTTGACACAAGCTATTGTTCGTGAAGGATTGAAAAATGTTACTGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b15893 AATCCAGTTGGTATTCGCCGAGGAATTGAACTTGCTGCTGAAACAGCTGTTTCGTCAATT
       :::::::::::::::::::::::::::::::: :: ::::::::::: ::: : ::::::
b27777 AATCCAGTTGGTATTCGCCGAGGAATTGAACTCGCAGCTGAAACAGCAGTTGCTTCAATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b15893 AAAGAGATGGCAATTCCTGTCCACGATAAATCAGCAATTGCGCAAGTAGCTACCGTTTCA
       ::::: :::::::::::::: :: :::::::::::::: :: ::::: ::::::::::::
b27777 AAAGAAATGGCAATTCCTGTTCATGATAAATCAGCAATCGCTCAAGTTGCTACCGTTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b15893 TCACGTAGTGAAAAAGTGGGTGAGTATATTTCTGATGCAATGGAACGTGTAGGTTCTGAC
       ::::::::::::::::: :: :: ::::::::::: :::::::: :::::::::::::::
b27777 TCACGTAGTGAAAAAGTTGGGGAATATATTTCTGACGCAATGGAGCGTGTAGGTTCTGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b15893 GGAGTTATCACCATTGAAGAATCAAAAGGGATGCAAACTGAACTCGATGTTGTTGAAGGA
       ::::::::::: :: :::::::::::::: :::::::: :: :: :::::::::::::::
b27777 GGAGTTATCACAATCGAAGAATCAAAAGGAATGCAAACAGAGCTTGATGTTGTTGAAGGA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15893 ATGCAATTTGACCGTGGATATTTGAGTCAATATATGGTTTCTAATACAGAAAAAATGGTT
       :::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::
b27777 ATGCAATTTGACCGTGGATACTTGAGTCAATATATGGTTTCTAATACAGAAAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b15893 GCTGAATTAGATAATCCTTATATTCTTATTACCGACAAAAAAATCTCAAACATTCAAGAA
       ::::: :::::::::::::::::::: ::::: :: :::::::::::::: :::::::::
b27777 GCTGAGTTAGATAATCCTTATATTCTGATTACGGATAAAAAAATCTCAAATATTCAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15893 ATTTTACCGCTCCTTGAACAAATCTTGAAAACAAATCGTCCACTTCTTATTGTAGCTGAT
       ::::::::::: ::::::::::: ::::::::::::::::::::: : ::::: ::::::
b27777 ATTTTACCGCTTCTTGAACAAATTTTGAAAACAAATCGTCCACTTTTAATTGTTGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b15893 GATGTTGATGGAGAAGCATTGCCAACGCTTGTTCTTAATAAGATTAAAGGTGTCTTCAAT
       :::::::::::::::::::::::::: ::::::::::::::::::::::: :::::::: 
b27777 GATGTTGATGGAGAAGCATTGCCAACTCTTGTTCTTAATAAGATTAAAGGGGTCTTCAAC
              490       500       510       520       530       540

              550  
b15893 GTTGTAGCTGTA
       :: :: ::::::
b27777 GTAGTCGCTGTA
              550  

</pre>
<hr>
<A name=b1090>
<pre>
>><a onClick="window.open('getRecord.php?id=b1090',
                                'cpndb_record'); return false;" href="getRecord.php?id=b1090" target=_"blank">b1090</a> AY029215 Lactococcus lactis subsp. cremoris stra  (552 nt)
 initn: 2391 init1: 2391 opt: 2391  Z-score: 89.2  bits: 26.3 E():   70
banded Smith-Waterman score: 2391; 92.6% identity (92.6% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15893 GCGACAGTTTTGACACAAGCTATTGTTCGTGAAGGTTTAAAAAATGTTACCGCAGGTGCA
       ::::::::::::::::::::::::::::::::::: :: ::::::::::: :::::::::
b1090  GCGACAGTTTTGACACAAGCTATTGTTCGTGAAGGATTGAAAAATGTTACTGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b15893 AATCCAGTTGGTATTCGCCGAGGAATTGAACTTGCTGCTGAAACAGCTGTTTCGTCAATT
       :::::::::::::::::::::::::::::::: :: ::::::::::: ::: : ::::::
b1090  AATCCAGTTGGTATTCGCCGAGGAATTGAACTCGCAGCTGAAACAGCAGTTGCTTCAATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b15893 AAAGAGATGGCAATTCCTGTCCACGATAAATCAGCAATTGCGCAAGTAGCTACCGTTTCA
       ::::: :::::::::::::: ::::::::::::::::: :: ::::: ::::::::::::
b1090  AAAGAAATGGCAATTCCTGTTCACGATAAATCAGCAATCGCTCAAGTTGCTACCGTTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b15893 TCACGTAGTGAAAAAGTGGGTGAGTATATTTCTGATGCAATGGAACGTGTAGGTTCTGAC
       ::::::::::::::::: :: :: ::::::::::: :::::::: :::::::::::::::
b1090  TCACGTAGTGAAAAAGTTGGGGAATATATTTCTGACGCAATGGAGCGTGTAGGTTCTGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b15893 GGAGTTATCACCATTGAAGAATCAAAAGGGATGCAAACTGAACTCGATGTTGTTGAAGGA
       ::::::::::: :: :::::::::::::: :::::::: :: :: :::::::::::::::
b1090  GGAGTTATCACAATCGAAGAATCAAAAGGAATGCAAACAGAGCTTGATGTTGTTGAAGGA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15893 ATGCAATTTGACCGTGGATATTTGAGTCAATATATGGTTTCTAATACAGAAAAAATGGTT
       :::::::::::::::::::: ::::::::::::::::::::::::::::: :::::::::
b1090  ATGCAATTTGACCGTGGATACTTGAGTCAATATATGGTTTCTAATACAGAGAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b15893 GCTGAATTAGATAATCCTTATATTCTTATTACCGACAAAAAAATCTCAAACATTCAAGAA
       ::::: :::::::::::::::::::: ::::: :: :::::::::::::: :::::::::
b1090  GCTGAGTTAGATAATCCTTATATTCTGATTACGGATAAAAAAATCTCAAATATTCAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15893 ATTTTACCGCTCCTTGAACAAATCTTGAAAACAAATCGTCCACTTCTTATTGTAGCTGAT
       ::::::::::: ::::::::::: ::::::::::::::::::::: : ::::: ::::::
b1090  ATTTTACCGCTTCTTGAACAAATTTTGAAAACAAATCGTCCACTTTTAATTGTTGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b15893 GATGTTGATGGAGAAGCATTGCCAACGCTTGTTCTTAATAAGATTAAAGGTGTCTTCAAT
       :::::::::::::::::::::::::: ::::::::::::::::::::::: :::::::: 
b1090  GATGTTGATGGAGAAGCATTGCCAACTCTTGTTCTTAATAAGATTAAAGGGGTCTTCAAC
              490       500       510       520       530       540

              550  
b15893 GTTGTAGCTGTA
       :: :: ::::::
b1090  GTAGTCGCTGTA
              550  

</pre>
<hr>
<A name=b27775>
<pre>
>><a onClick="window.open('getRecord.php?id=b27775',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27775" target=_"blank">b27775</a> ASXF01000176 Lactococcus lactis  subsp. cremori  (552 nt)
 initn: 2391 init1: 2391 opt: 2391  Z-score: 89.2  bits: 26.3 E():   70
banded Smith-Waterman score: 2391; 92.6% identity (92.6% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15893 GCGACAGTTTTGACACAAGCTATTGTTCGTGAAGGTTTAAAAAATGTTACCGCAGGTGCA
       ::::::::::::::::::::::::::::::::::: :: ::::::::::: :::::::::
b27775 GCGACAGTTTTGACACAAGCTATTGTTCGTGAAGGATTGAAAAATGTTACTGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b15893 AATCCAGTTGGTATTCGCCGAGGAATTGAACTTGCTGCTGAAACAGCTGTTTCGTCAATT
       :::::::::::::::::::::::::::::::: :: ::::::::::: ::: : ::::::
b27775 AATCCAGTTGGTATTCGCCGAGGAATTGAACTCGCAGCTGAAACAGCAGTTGCTTCAATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b15893 AAAGAGATGGCAATTCCTGTCCACGATAAATCAGCAATTGCGCAAGTAGCTACCGTTTCA
       ::::: :::::::::::::: :: :::::::::::::: :: ::::: ::::::::::::
b27775 AAAGAAATGGCAATTCCTGTTCATGATAAATCAGCAATCGCTCAAGTTGCTACCGTTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b15893 TCACGTAGTGAAAAAGTGGGTGAGTATATTTCTGATGCAATGGAACGTGTAGGTTCTGAC
       ::::::::::::::::: :: :: ::::::::::: :::::::: :::::::::::::::
b27775 TCACGTAGTGAAAAAGTTGGGGAATATATTTCTGACGCAATGGAGCGTGTAGGTTCTGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b15893 GGAGTTATCACCATTGAAGAATCAAAAGGGATGCAAACTGAACTCGATGTTGTTGAAGGA
       ::::::::::: :: :::::::::::::: :::::::: :: :: :::::::::::::::
b27775 GGAGTTATCACAATCGAAGAATCAAAAGGAATGCAAACAGAGCTTGATGTTGTTGAAGGA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15893 ATGCAATTTGACCGTGGATATTTGAGTCAATATATGGTTTCTAATACAGAAAAAATGGTT
       :::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::
b27775 ATGCAATTTGACCGTGGATACTTGAGTCAATATATGGTTTCTAATACAGAAAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b15893 GCTGAATTAGATAATCCTTATATTCTTATTACCGACAAAAAAATCTCAAACATTCAAGAA
       ::::: :::::::::::::::::::: ::::: :: :::::::::::::: :::::::::
b27775 GCTGAGTTAGATAATCCTTATATTCTGATTACGGATAAAAAAATCTCAAATATTCAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15893 ATTTTACCGCTCCTTGAACAAATCTTGAAAACAAATCGTCCACTTCTTATTGTAGCTGAT
       ::::::::::: ::::::::::: ::::::::::::::::::::: : ::::: ::::::
b27775 ATTTTACCGCTTCTTGAACAAATTTTGAAAACAAATCGTCCACTTTTAATTGTTGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b15893 GATGTTGATGGAGAAGCATTGCCAACGCTTGTTCTTAATAAGATTAAAGGTGTCTTCAAT
       :::::::::::::::::::::::::: ::::::::::::::::::::::: :::::::: 
b27775 GATGTTGATGGAGAAGCATTGCCAACTCTTGTTCTTAATAAGATTAAAGGGGTCTTCAAC
              490       500       510       520       530       540

              550  
b15893 GTTGTAGCTGTA
       :: :: ::::::
b27775 GTAGTCGCTGTA
              550  

</pre>
<hr>
<A name=b17517>
<pre>
>><a onClick="window.open('getRecord.php?id=b17517',
                                'cpndb_record'); return false;" href="getRecord.php?id=b17517" target=_"blank">b17517</a> CP002094 Lactococcus lactis subsp. cremoris NZ9  (552 nt)
 initn: 2391 init1: 2391 opt: 2391  Z-score: 89.2  bits: 26.3 E():   70
banded Smith-Waterman score: 2391; 92.6% identity (92.6% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15893 GCGACAGTTTTGACACAAGCTATTGTTCGTGAAGGTTTAAAAAATGTTACCGCAGGTGCA
       ::::::::::::::::::::::::::::::::::: :: ::::::::::: :::::::::
b17517 GCGACAGTTTTGACACAAGCTATTGTTCGTGAAGGATTGAAAAATGTTACTGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b15893 AATCCAGTTGGTATTCGCCGAGGAATTGAACTTGCTGCTGAAACAGCTGTTTCGTCAATT
       :::::::::::::::::::::::::::::::: :: ::::::::::: ::: : ::::::
b17517 AATCCAGTTGGTATTCGCCGAGGAATTGAACTCGCAGCTGAAACAGCAGTTGCTTCAATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b15893 AAAGAGATGGCAATTCCTGTCCACGATAAATCAGCAATTGCGCAAGTAGCTACCGTTTCA
       ::::: :::::::::::::: ::::::::::::::::: :: ::::: ::::::::::::
b17517 AAAGAAATGGCAATTCCTGTTCACGATAAATCAGCAATCGCTCAAGTTGCTACCGTTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b15893 TCACGTAGTGAAAAAGTGGGTGAGTATATTTCTGATGCAATGGAACGTGTAGGTTCTGAC
       ::::::::::::::::: :: :: ::::::::::: :::::::: :::::::::::::::
b17517 TCACGTAGTGAAAAAGTTGGGGAATATATTTCTGACGCAATGGAGCGTGTAGGTTCTGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b15893 GGAGTTATCACCATTGAAGAATCAAAAGGGATGCAAACTGAACTCGATGTTGTTGAAGGA
       ::::::::::: :: :::::::::::::: :::::::: :: :: :::::::::::::::
b17517 GGAGTTATCACAATCGAAGAATCAAAAGGAATGCAAACAGAGCTTGATGTTGTTGAAGGA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15893 ATGCAATTTGACCGTGGATATTTGAGTCAATATATGGTTTCTAATACAGAAAAAATGGTT
       :::::::::::::::::::: ::::::::::::::::::::::::::::: :::::::::
b17517 ATGCAATTTGACCGTGGATACTTGAGTCAATATATGGTTTCTAATACAGAGAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b15893 GCTGAATTAGATAATCCTTATATTCTTATTACCGACAAAAAAATCTCAAACATTCAAGAA
       ::::: :::::::::::::::::::: ::::: :: :::::::::::::: :::::::::
b17517 GCTGAGTTAGATAATCCTTATATTCTGATTACGGATAAAAAAATCTCAAATATTCAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15893 ATTTTACCGCTCCTTGAACAAATCTTGAAAACAAATCGTCCACTTCTTATTGTAGCTGAT
       ::::::::::: ::::::::::: ::::::::::::::::::::: : ::::: ::::::
b17517 ATTTTACCGCTTCTTGAACAAATTTTGAAAACAAATCGTCCACTTTTAATTGTTGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b15893 GATGTTGATGGAGAAGCATTGCCAACGCTTGTTCTTAATAAGATTAAAGGTGTCTTCAAT
       :::::::::::::::::::::::::: ::::::::::::::::::::::: :::::::: 
b17517 GATGTTGATGGAGAAGCATTGCCAACTCTTGTTCTTAATAAGATTAAAGGGGTCTTCAAC
              490       500       510       520       530       540

              550  
b15893 GTTGTAGCTGTA
       :: :: ::::::
b17517 GTAGTCGCTGTA
              550  

</pre>
<hr>
<A name=b27902>
<pre>
>><a onClick="window.open('getRecord.php?id=b27902',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27902" target=_"blank">b27902</a> NC_022369 Lactococcus  lactis  subsp. cremoris   (552 nt)
 initn: 2391 init1: 2391 opt: 2391  Z-score: 89.2  bits: 26.3 E():   70
banded Smith-Waterman score: 2391; 92.6% identity (92.6% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15893 GCGACAGTTTTGACACAAGCTATTGTTCGTGAAGGTTTAAAAAATGTTACCGCAGGTGCA
       ::::::::::::::::::::::::::::::::::: :: ::::::::::: :::::::::
b27902 GCGACAGTTTTGACACAAGCTATTGTTCGTGAAGGATTGAAAAATGTTACTGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b15893 AATCCAGTTGGTATTCGCCGAGGAATTGAACTTGCTGCTGAAACAGCTGTTTCGTCAATT
       :::::::::::::::::::::::::::::::: :: ::::::::::: ::: : ::::::
b27902 AATCCAGTTGGTATTCGCCGAGGAATTGAACTCGCAGCTGAAACAGCAGTTGCTTCAATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b15893 AAAGAGATGGCAATTCCTGTCCACGATAAATCAGCAATTGCGCAAGTAGCTACCGTTTCA
       ::::: :::::::::::::: ::::::::::::::::: :: ::::: ::::::::::::
b27902 AAAGAAATGGCAATTCCTGTTCACGATAAATCAGCAATCGCTCAAGTTGCTACCGTTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b15893 TCACGTAGTGAAAAAGTGGGTGAGTATATTTCTGATGCAATGGAACGTGTAGGTTCTGAC
       ::::::::::::::::: :: :: ::::::::::: :::::::: :::::::::::::::
b27902 TCACGTAGTGAAAAAGTTGGGGAATATATTTCTGACGCAATGGAGCGTGTAGGTTCTGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b15893 GGAGTTATCACCATTGAAGAATCAAAAGGGATGCAAACTGAACTCGATGTTGTTGAAGGA
       ::::::::::: :: :::::::::::::: :::::::: :: :: :::::::::::::::
b27902 GGAGTTATCACAATCGAAGAATCAAAAGGAATGCAAACAGAGCTTGATGTTGTTGAAGGA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15893 ATGCAATTTGACCGTGGATATTTGAGTCAATATATGGTTTCTAATACAGAAAAAATGGTT
       :::::::::::::::::::: ::::::::::::::::::::::::::::: :::::::::
b27902 ATGCAATTTGACCGTGGATACTTGAGTCAATATATGGTTTCTAATACAGAGAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b15893 GCTGAATTAGATAATCCTTATATTCTTATTACCGACAAAAAAATCTCAAACATTCAAGAA
       ::::: :::::::::::::::::::: ::::: :: :::::::::::::: :::::::::
b27902 GCTGAGTTAGATAATCCTTATATTCTGATTACGGATAAAAAAATCTCAAATATTCAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15893 ATTTTACCGCTCCTTGAACAAATCTTGAAAACAAATCGTCCACTTCTTATTGTAGCTGAT
       ::::::::::: ::::::::::: ::::::::::::::::::::: : ::::: ::::::
b27902 ATTTTACCGCTTCTTGAACAAATTTTGAAAACAAATCGTCCACTTTTAATTGTTGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b15893 GATGTTGATGGAGAAGCATTGCCAACGCTTGTTCTTAATAAGATTAAAGGTGTCTTCAAT
       :::::::::::::::::::::::::: ::::::::::::::::::::::: :::::::: 
b27902 GATGTTGATGGAGAAGCATTGCCAACTCTTGTTCTTAATAAGATTAAAGGGGTCTTCAAC
              490       500       510       520       530       540

              550  
b15893 GTTGTAGCTGTA
       :: :: ::::::
b27902 GTAGTCGCTGTA
              550  

</pre>
<hr>
<A name=b21805>
<pre>
>><a onClick="window.open('getRecord.php?id=b21805',
                                'cpndb_record'); return false;" href="getRecord.php?id=b21805" target=_"blank">b21805</a> NC_019435 Lactococcus lactis subsp. cremoris UC  (552 nt)
 initn: 2382 init1: 2382 opt: 2382  Z-score: 89.0  bits: 26.3 E():   72
banded Smith-Waterman score: 2382; 92.4% identity (92.4% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15893 GCGACAGTTTTGACACAAGCTATTGTTCGTGAAGGTTTAAAAAATGTTACCGCAGGTGCA
       ::::::::::::::::::::::::::::::::::: :: ::::::::::: :::::::::
b21805 GCGACAGTTTTGACACAAGCTATTGTTCGTGAAGGATTGAAAAATGTTACTGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b15893 AATCCAGTTGGTATTCGCCGAGGAATTGAACTTGCTGCTGAAACAGCTGTTTCGTCAATT
       :::::::::::::::::::::::::::::::: :: ::::::::::: ::: : ::::::
b21805 AATCCAGTTGGTATTCGCCGAGGAATTGAACTCGCAGCTGAAACAGCAGTTGCTTCAATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b15893 AAAGAGATGGCAATTCCTGTCCACGATAAATCAGCAATTGCGCAAGTAGCTACCGTTTCA
       ::::: :::::::::::::: :: :::::::::::::: :: ::::: ::::::::::::
b21805 AAAGAAATGGCAATTCCTGTTCATGATAAATCAGCAATCGCTCAAGTTGCTACCGTTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b15893 TCACGTAGTGAAAAAGTGGGTGAGTATATTTCTGATGCAATGGAACGTGTAGGTTCTGAC
       ::::::::::::::::: :: :: ::::::::::: :::::::: :::::::::::::::
b21805 TCACGTAGTGAAAAAGTTGGGGAATATATTTCTGACGCAATGGAGCGTGTAGGTTCTGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b15893 GGAGTTATCACCATTGAAGAATCAAAAGGGATGCAAACTGAACTCGATGTTGTTGAAGGA
       ::::::::::: :: :::::::::::::: :::::::: :: :: :::::::::::::::
b21805 GGAGTTATCACAATCGAAGAATCAAAAGGAATGCAAACAGAGCTTGATGTTGTTGAAGGA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15893 ATGCAATTTGACCGTGGATATTTGAGTCAATATATGGTTTCTAATACAGAAAAAATGGTT
       :::::::::::::::::::: ::::::::::::::::::::::::::::: :::::::::
b21805 ATGCAATTTGACCGTGGATACTTGAGTCAATATATGGTTTCTAATACAGAGAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b15893 GCTGAATTAGATAATCCTTATATTCTTATTACCGACAAAAAAATCTCAAACATTCAAGAA
       ::::: :::::::::::::::::::: ::::: :: :::::::::::::: :::::::::
b21805 GCTGAGTTAGATAATCCTTATATTCTGATTACGGATAAAAAAATCTCAAATATTCAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15893 ATTTTACCGCTCCTTGAACAAATCTTGAAAACAAATCGTCCACTTCTTATTGTAGCTGAT
       ::::::::::: ::::::::::: ::::::::::::::::::::: : ::::: ::::::
b21805 ATTTTACCGCTTCTTGAACAAATTTTGAAAACAAATCGTCCACTTTTAATTGTTGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b15893 GATGTTGATGGAGAAGCATTGCCAACGCTTGTTCTTAATAAGATTAAAGGTGTCTTCAAT
       :::::::::::::::::::::::::: ::::::::::::::::::::::: :::::::: 
b21805 GATGTTGATGGAGAAGCATTGCCAACTCTTGTTCTTAATAAGATTAAAGGGGTCTTCAAC
              490       500       510       520       530       540

              550  
b15893 GTTGTAGCTGTA
       :: :: ::::::
b21805 GTAGTCGCTGTA
              550  

</pre>
<hr>
<A name=b20086>
<pre>
>><a onClick="window.open('getRecord.php?id=b20086',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20086" target=_"blank">b20086</a> CP003132 Lactococcus lactis subsp. cremoris A76  (552 nt)
 initn: 2382 init1: 2382 opt: 2382  Z-score: 89.0  bits: 26.3 E():   72
banded Smith-Waterman score: 2382; 92.4% identity (92.4% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15893 GCGACAGTTTTGACACAAGCTATTGTTCGTGAAGGTTTAAAAAATGTTACCGCAGGTGCA
       ::::::::::::::::::::::::::::::::::: :: ::::::::::: :::::::::
b20086 GCGACAGTTTTGACACAAGCTATTGTTCGTGAAGGATTGAAAAATGTTACTGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b15893 AATCCAGTTGGTATTCGCCGAGGAATTGAACTTGCTGCTGAAACAGCTGTTTCGTCAATT
       :::::::::::::::::::::::::::::::: :: ::::::::::: ::: : ::::::
b20086 AATCCAGTTGGTATTCGCCGAGGAATTGAACTCGCAGCTGAAACAGCAGTTGCTTCAATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b15893 AAAGAGATGGCAATTCCTGTCCACGATAAATCAGCAATTGCGCAAGTAGCTACCGTTTCA
       ::::: :::::::::::::: :: :::::::::::::: :: ::::: ::::::::::::
b20086 AAAGAAATGGCAATTCCTGTTCATGATAAATCAGCAATCGCTCAAGTTGCTACCGTTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b15893 TCACGTAGTGAAAAAGTGGGTGAGTATATTTCTGATGCAATGGAACGTGTAGGTTCTGAC
       ::::::::::::::::: :: :: ::::::::::: :::::::: :::::::::::::::
b20086 TCACGTAGTGAAAAAGTTGGGGAATATATTTCTGACGCAATGGAGCGTGTAGGTTCTGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b15893 GGAGTTATCACCATTGAAGAATCAAAAGGGATGCAAACTGAACTCGATGTTGTTGAAGGA
       ::::::::::: :: :::::::::::::: :::::::: :: :: :::::::::::::::
b20086 GGAGTTATCACAATCGAAGAATCAAAAGGAATGCAAACAGAGCTTGATGTTGTTGAAGGA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15893 ATGCAATTTGACCGTGGATATTTGAGTCAATATATGGTTTCTAATACAGAAAAAATGGTT
       :::::::::::::::::::: ::::::::::::::::::::::::::::: :::::::::
b20086 ATGCAATTTGACCGTGGATACTTGAGTCAATATATGGTTTCTAATACAGAGAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b15893 GCTGAATTAGATAATCCTTATATTCTTATTACCGACAAAAAAATCTCAAACATTCAAGAA
       ::::: :::::::::::::::::::: ::::: :: :::::::::::::: :::::::::
b20086 GCTGAGTTAGATAATCCTTATATTCTGATTACGGATAAAAAAATCTCAAATATTCAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15893 ATTTTACCGCTCCTTGAACAAATCTTGAAAACAAATCGTCCACTTCTTATTGTAGCTGAT
       ::::::::::: ::::::::::: ::::::::::::::::::::: : ::::: ::::::
b20086 ATTTTACCGCTTCTTGAACAAATTTTGAAAACAAATCGTCCACTTTTAATTGTTGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b15893 GATGTTGATGGAGAAGCATTGCCAACGCTTGTTCTTAATAAGATTAAAGGTGTCTTCAAT
       :::::::::::::::::::::::::: ::::::::::::::::::::::: :::::::: 
b20086 GATGTTGATGGAGAAGCATTGCCAACTCTTGTTCTTAATAAGATTAAAGGGGTCTTCAAC
              490       500       510       520       530       540

              550  
b15893 GTTGTAGCTGTA
       :: :: ::::::
b20086 GTAGTCGCTGTA
              550  

</pre>
<hr>
<A name=b27773>
<pre>
>><a onClick="window.open('getRecord.php?id=b27773',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27773" target=_"blank">b27773</a> ATBA01000157 Lactococcus  lactis  subsp. cremor  (552 nt)
 initn: 2382 init1: 2382 opt: 2382  Z-score: 89.0  bits: 26.3 E():   72
banded Smith-Waterman score: 2382; 92.4% identity (92.4% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15893 GCGACAGTTTTGACACAAGCTATTGTTCGTGAAGGTTTAAAAAATGTTACCGCAGGTGCA
       ::::::::::::::::::::::::::::::::::: :: ::::::::::: :::::::::
b27773 GCGACAGTTTTGACACAAGCTATTGTTCGTGAAGGATTGAAAAATGTTACTGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b15893 AATCCAGTTGGTATTCGCCGAGGAATTGAACTTGCTGCTGAAACAGCTGTTTCGTCAATT
       :::::::::::::::::::::::::::::::: :: ::::::::::: ::: : ::::::
b27773 AATCCAGTTGGTATTCGCCGAGGAATTGAACTCGCAGCTGAAACAGCAGTTGCTTCAATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b15893 AAAGAGATGGCAATTCCTGTCCACGATAAATCAGCAATTGCGCAAGTAGCTACCGTTTCA
       ::::: :::::::::::::: :: :::::::::::::: :: ::::: ::::::::::::
b27773 AAAGAAATGGCAATTCCTGTTCATGATAAATCAGCAATCGCTCAAGTTGCTACCGTTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b15893 TCACGTAGTGAAAAAGTGGGTGAGTATATTTCTGATGCAATGGAACGTGTAGGTTCTGAC
       ::::::::::::::::: :: :: ::::::::::: :::::::: :::::::::::::::
b27773 TCACGTAGTGAAAAAGTTGGGGAATATATTTCTGACGCAATGGAGCGTGTAGGTTCTGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b15893 GGAGTTATCACCATTGAAGAATCAAAAGGGATGCAAACTGAACTCGATGTTGTTGAAGGA
       ::::::::::: :: :::::::::::::: :::::::: :: :: :::::::::::::::
b27773 GGAGTTATCACAATCGAAGAATCAAAAGGAATGCAAACAGAGCTTGATGTTGTTGAAGGA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15893 ATGCAATTTGACCGTGGATATTTGAGTCAATATATGGTTTCTAATACAGAAAAAATGGTT
       :::::::::::::::::::: ::::::::::::::::::::::::::::: :::::::::
b27773 ATGCAATTTGACCGTGGATACTTGAGTCAATATATGGTTTCTAATACAGAGAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b15893 GCTGAATTAGATAATCCTTATATTCTTATTACCGACAAAAAAATCTCAAACATTCAAGAA
       ::::: :::::::::::::::::::: ::::: :: :::::::::::::: :::::::::
b27773 GCTGAGTTAGATAATCCTTATATTCTGATTACGGATAAAAAAATCTCAAATATTCAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15893 ATTTTACCGCTCCTTGAACAAATCTTGAAAACAAATCGTCCACTTCTTATTGTAGCTGAT
       ::::::::::: ::::::::::: ::::::::::::::::::::: : ::::: ::::::
b27773 ATTTTACCGCTTCTTGAACAAATTTTGAAAACAAATCGTCCACTTTTAATTGTTGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b15893 GATGTTGATGGAGAAGCATTGCCAACGCTTGTTCTTAATAAGATTAAAGGTGTCTTCAAT
       :::::::::::::::::::::::::: ::::::::::::::::::::::: :::::::: 
b27773 GATGTTGATGGAGAAGCATTGCCAACTCTTGTTCTTAATAAGATTAAAGGGGTCTTCAAC
              490       500       510       520       530       540

              550  
b15893 GTTGTAGCTGTA
       :: :: ::::::
b27773 GTAGTCGCTGTA
              550  

</pre>
<hr>
<A name=b7507>
<pre>
>><a onClick="window.open('getRecord.php?id=b7507',
                                'cpndb_record'); return false;" href="getRecord.php?id=b7507" target=_"blank">b7507</a> CP000425 Lactococcus lactis subsp. cremoris SK11  (552 nt)
 initn: 2382 init1: 2382 opt: 2382  Z-score: 89.0  bits: 26.3 E():   72
banded Smith-Waterman score: 2382; 92.4% identity (92.4% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b15893 GCGACAGTTTTGACACAAGCTATTGTTCGTGAAGGTTTAAAAAATGTTACCGCAGGTGCA
       ::::::::::::::::::::::::::::::::::: :: ::::::::::: :::::::::
b7507  GCGACAGTTTTGACACAAGCTATTGTTCGTGAAGGATTGAAAAATGTTACTGCAGGTGCA
               10        20        30        40        50        60

               70        80        90       100       110       120
b15893 AATCCAGTTGGTATTCGCCGAGGAATTGAACTTGCTGCTGAAACAGCTGTTTCGTCAATT
       :::::::::::::::::::::::::::::::: :: ::::::::::: ::: : ::::::
b7507  AATCCAGTTGGTATTCGCCGAGGAATTGAACTCGCAGCTGAAACAGCAGTTGCTTCAATT
               70        80        90       100       110       120

              130       140       150       160       170       180
b15893 AAAGAGATGGCAATTCCTGTCCACGATAAATCAGCAATTGCGCAAGTAGCTACCGTTTCA
       ::::: :::::::::::::: :: :::::::::::::: :: ::::: ::::::::::::
b7507  AAAGAAATGGCAATTCCTGTTCATGATAAATCAGCAATCGCTCAAGTTGCTACCGTTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b15893 TCACGTAGTGAAAAAGTGGGTGAGTATATTTCTGATGCAATGGAACGTGTAGGTTCTGAC
       ::::::::::::::::: :: :: ::::::::::: :::::::: :::::::::::::::
b7507  TCACGTAGTGAAAAAGTTGGGGAATATATTTCTGACGCAATGGAGCGTGTAGGTTCTGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b15893 GGAGTTATCACCATTGAAGAATCAAAAGGGATGCAAACTGAACTCGATGTTGTTGAAGGA
       ::::::::::: :: :::::::::::::: :::::::: :: :: :::::::::::::::
b7507  GGAGTTATCACAATCGAAGAATCAAAAGGAATGCAAACAGAGCTTGATGTTGTTGAAGGA
              250       260       270       280       290       300

              310       320       330       340       350       360
b15893 ATGCAATTTGACCGTGGATATTTGAGTCAATATATGGTTTCTAATACAGAAAAAATGGTT
       :::::::::::::::::::: ::::::::::::::::::::::::::::: :::::::::
b7507  ATGCAATTTGACCGTGGATACTTGAGTCAATATATGGTTTCTAATACAGAGAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b15893 GCTGAATTAGATAATCCTTATATTCTTATTACCGACAAAAAAATCTCAAACATTCAAGAA
       ::::: :::::::::::::::::::: ::::: :: :::::::::::::: :::::::::
b7507  GCTGAGTTAGATAATCCTTATATTCTGATTACGGATAAAAAAATCTCAAATATTCAAGAA
              370       380       390       400       410       420

              430       440       450       460       470       480
b15893 ATTTTACCGCTCCTTGAACAAATCTTGAAAACAAATCGTCCACTTCTTATTGTAGCTGAT
       ::::::::::: ::::::::::: ::::::::::::::::::::: : ::::: ::::::
b7507  ATTTTACCGCTTCTTGAACAAATTTTGAAAACAAATCGTCCACTTTTAATTGTTGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b15893 GATGTTGATGGAGAAGCATTGCCAACGCTTGTTCTTAATAAGATTAAAGGTGTCTTCAAT
       :::::::::::::::::::::::::: ::::::::::::::::::::::: :::::::: 
b7507  GATGTTGATGGAGAAGCATTGCCAACTCTTGTTCTTAATAAGATTAAAGGAGTCTTCAAC
              490       500       510       520       530       540

              550  
b15893 GTTGTAGCTGTA
       :: :: ::::::
b7507  GTAGTCGCTGTA
              550  

</pre>
<hr>
<p><pre>


552 residues in 1 query   sequences
10433008 residues in 18820 library sequences
 Scomplib [35.03]
 start: Mon Jul 22 03:23:18 2024 done: Mon Jul 22 03:23:21 2024
 Total Scan time:  2.110 Total Display time:  0.020

Function used was FASTA [version 35.03 Feb. 18, 2008]
</pre>