/var/www/html/cpndb/blastp_results/b15769.blastp
BLAST Search Results
BLASTP 2.2.26 [Sep-21-2011]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= b15769
(184 letters)
Database: reference_a_ut
18,818 sequences; 3,477,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
b28490 AAD18915 Chlamydophila pneumoniae CWL029 370 e-134
b28374 ETR79526 Chlamydia pneumoniae B21 370 e-134
b4182 NP_877077 Chlamydophila pneumoniae TW-183 ATCC VR-2282 370 e-134
b1335 NP_445632 Chlamydophila pneumoniae AR39 370 e-134
b1323 NP_224972 Chlamydophila pneumoniae CWL029 370 e-134
b1277 NP_300834 Chlamydophila pneumoniae J138 370 e-134
b31401 WP_100934374 Candidatus Chlamydia corallus G3/2742-324 305 e-108
b4032 NP_829841 Chlamydophila caviae GPIC ATCC VR-813 171 4e-55
b21033 AFS25323 Chlamydia psittaci M56 167 2e-53
b8483 BAE80805 Chlamydophila felis Fe/C-56 165 8e-53
b23022 YP_007438707 Chlamydophila psittaci Mat116 164 1e-52
b21712 YP_006974848 Chlamydia psittaci 01DC12 164 1e-52
b21045 AFS21115 Chlamydia psittaci GR9 164 1e-52
b21042 AFS21694 Chlamydia psittaci MN 164 1e-52
b21039 AFS23255 Chlamydia psittaci VS225 164 1e-52
b21036 AFS24269 Chlamydia psittaci WS/RT/E30 164 1e-52
b21027 AFS27500 Chlamydia psittaci CP3 ATCC VR-574 164 1e-52
b21024 AFS28547 Chlamydia psittaci NJ1 164 1e-52
b21048 AFS20070 Chlamydia psittaci 84/55 164 2e-52
b19089 AEG86004 Chlamydophila psittaci C19/98 164 2e-52
>b28490 AAD18915 Chlamydophila pneumoniae CWL029
Length = 184
Score = 370 bits (951), Expect = e-134, Method: Compositional matrix adjust.
Identities = 184/184 (100%), Positives = 184/184 (100%)
Query: 1 ALVVIDALFTQGLKGIAAGLDPQEIKAGILLSVEMVYQQLQRQAIELQSPKDVLHVAMVA 60
ALVVIDALFTQGLKGIAAGLDPQEIKAGILLSVEMVYQQLQRQAIELQSPKDVLHVAMVA
Sbjct: 1 ALVVIDALFTQGLKGIAAGLDPQEIKAGILLSVEMVYQQLQRQAIELQSPKDVLHVAMVA 60
Query: 61 ANHDVTLGTVVATVISQADLKGVFSSKDSGISKTRGLGKRVKSGYLSPYFVTRPETMDVV 120
ANHDVTLGTVVATVISQADLKGVFSSKDSGISKTRGLGKRVKSGYLSPYFVTRPETMDVV
Sbjct: 61 ANHDVTLGTVVATVISQADLKGVFSSKDSGISKTRGLGKRVKSGYLSPYFVTRPETMDVV 120
Query: 121 WEEALVLILSHSLVSLSEELIRYLELISEQNTHPLVIIAEDFDQNVLRTLILNKLRNGLP 180
WEEALVLILSHSLVSLSEELIRYLELISEQNTHPLVIIAEDFDQNVLRTLILNKLRNGLP
Sbjct: 121 WEEALVLILSHSLVSLSEELIRYLELISEQNTHPLVIIAEDFDQNVLRTLILNKLRNGLP 180
Query: 181 VCAV 184
VCAV
Sbjct: 181 VCAV 184
>b28374 ETR79526 Chlamydia pneumoniae B21
Length = 184
Score = 370 bits (951), Expect = e-134, Method: Compositional matrix adjust.
Identities = 184/184 (100%), Positives = 184/184 (100%)
Query: 1 ALVVIDALFTQGLKGIAAGLDPQEIKAGILLSVEMVYQQLQRQAIELQSPKDVLHVAMVA 60
ALVVIDALFTQGLKGIAAGLDPQEIKAGILLSVEMVYQQLQRQAIELQSPKDVLHVAMVA
Sbjct: 1 ALVVIDALFTQGLKGIAAGLDPQEIKAGILLSVEMVYQQLQRQAIELQSPKDVLHVAMVA 60
Query: 61 ANHDVTLGTVVATVISQADLKGVFSSKDSGISKTRGLGKRVKSGYLSPYFVTRPETMDVV 120
ANHDVTLGTVVATVISQADLKGVFSSKDSGISKTRGLGKRVKSGYLSPYFVTRPETMDVV
Sbjct: 61 ANHDVTLGTVVATVISQADLKGVFSSKDSGISKTRGLGKRVKSGYLSPYFVTRPETMDVV 120
Query: 121 WEEALVLILSHSLVSLSEELIRYLELISEQNTHPLVIIAEDFDQNVLRTLILNKLRNGLP 180
WEEALVLILSHSLVSLSEELIRYLELISEQNTHPLVIIAEDFDQNVLRTLILNKLRNGLP
Sbjct: 121 WEEALVLILSHSLVSLSEELIRYLELISEQNTHPLVIIAEDFDQNVLRTLILNKLRNGLP 180
Query: 181 VCAV 184
VCAV
Sbjct: 181 VCAV 184
>b4182 NP_877077 Chlamydophila pneumoniae TW-183 ATCC VR-2282
Length = 184
Score = 370 bits (951), Expect = e-134, Method: Compositional matrix adjust.
Identities = 184/184 (100%), Positives = 184/184 (100%)
Query: 1 ALVVIDALFTQGLKGIAAGLDPQEIKAGILLSVEMVYQQLQRQAIELQSPKDVLHVAMVA 60
ALVVIDALFTQGLKGIAAGLDPQEIKAGILLSVEMVYQQLQRQAIELQSPKDVLHVAMVA
Sbjct: 1 ALVVIDALFTQGLKGIAAGLDPQEIKAGILLSVEMVYQQLQRQAIELQSPKDVLHVAMVA 60
Query: 61 ANHDVTLGTVVATVISQADLKGVFSSKDSGISKTRGLGKRVKSGYLSPYFVTRPETMDVV 120
ANHDVTLGTVVATVISQADLKGVFSSKDSGISKTRGLGKRVKSGYLSPYFVTRPETMDVV
Sbjct: 61 ANHDVTLGTVVATVISQADLKGVFSSKDSGISKTRGLGKRVKSGYLSPYFVTRPETMDVV 120
Query: 121 WEEALVLILSHSLVSLSEELIRYLELISEQNTHPLVIIAEDFDQNVLRTLILNKLRNGLP 180
WEEALVLILSHSLVSLSEELIRYLELISEQNTHPLVIIAEDFDQNVLRTLILNKLRNGLP
Sbjct: 121 WEEALVLILSHSLVSLSEELIRYLELISEQNTHPLVIIAEDFDQNVLRTLILNKLRNGLP 180
Query: 181 VCAV 184
VCAV
Sbjct: 181 VCAV 184
>b1335 NP_445632 Chlamydophila pneumoniae AR39
Length = 184
Score = 370 bits (951), Expect = e-134, Method: Compositional matrix adjust.
Identities = 184/184 (100%), Positives = 184/184 (100%)
Query: 1 ALVVIDALFTQGLKGIAAGLDPQEIKAGILLSVEMVYQQLQRQAIELQSPKDVLHVAMVA 60
ALVVIDALFTQGLKGIAAGLDPQEIKAGILLSVEMVYQQLQRQAIELQSPKDVLHVAMVA
Sbjct: 1 ALVVIDALFTQGLKGIAAGLDPQEIKAGILLSVEMVYQQLQRQAIELQSPKDVLHVAMVA 60
Query: 61 ANHDVTLGTVVATVISQADLKGVFSSKDSGISKTRGLGKRVKSGYLSPYFVTRPETMDVV 120
ANHDVTLGTVVATVISQADLKGVFSSKDSGISKTRGLGKRVKSGYLSPYFVTRPETMDVV
Sbjct: 61 ANHDVTLGTVVATVISQADLKGVFSSKDSGISKTRGLGKRVKSGYLSPYFVTRPETMDVV 120
Query: 121 WEEALVLILSHSLVSLSEELIRYLELISEQNTHPLVIIAEDFDQNVLRTLILNKLRNGLP 180
WEEALVLILSHSLVSLSEELIRYLELISEQNTHPLVIIAEDFDQNVLRTLILNKLRNGLP
Sbjct: 121 WEEALVLILSHSLVSLSEELIRYLELISEQNTHPLVIIAEDFDQNVLRTLILNKLRNGLP 180
Query: 181 VCAV 184
VCAV
Sbjct: 181 VCAV 184
>b1323 NP_224972 Chlamydophila pneumoniae CWL029
Length = 184
Score = 370 bits (951), Expect = e-134, Method: Compositional matrix adjust.
Identities = 184/184 (100%), Positives = 184/184 (100%)
Query: 1 ALVVIDALFTQGLKGIAAGLDPQEIKAGILLSVEMVYQQLQRQAIELQSPKDVLHVAMVA 60
ALVVIDALFTQGLKGIAAGLDPQEIKAGILLSVEMVYQQLQRQAIELQSPKDVLHVAMVA
Sbjct: 1 ALVVIDALFTQGLKGIAAGLDPQEIKAGILLSVEMVYQQLQRQAIELQSPKDVLHVAMVA 60
Query: 61 ANHDVTLGTVVATVISQADLKGVFSSKDSGISKTRGLGKRVKSGYLSPYFVTRPETMDVV 120
ANHDVTLGTVVATVISQADLKGVFSSKDSGISKTRGLGKRVKSGYLSPYFVTRPETMDVV
Sbjct: 61 ANHDVTLGTVVATVISQADLKGVFSSKDSGISKTRGLGKRVKSGYLSPYFVTRPETMDVV 120
Query: 121 WEEALVLILSHSLVSLSEELIRYLELISEQNTHPLVIIAEDFDQNVLRTLILNKLRNGLP 180
WEEALVLILSHSLVSLSEELIRYLELISEQNTHPLVIIAEDFDQNVLRTLILNKLRNGLP
Sbjct: 121 WEEALVLILSHSLVSLSEELIRYLELISEQNTHPLVIIAEDFDQNVLRTLILNKLRNGLP 180
Query: 181 VCAV 184
VCAV
Sbjct: 181 VCAV 184
>b1277 NP_300834 Chlamydophila pneumoniae J138
Length = 184
Score = 370 bits (951), Expect = e-134, Method: Compositional matrix adjust.
Identities = 184/184 (100%), Positives = 184/184 (100%)
Query: 1 ALVVIDALFTQGLKGIAAGLDPQEIKAGILLSVEMVYQQLQRQAIELQSPKDVLHVAMVA 60
ALVVIDALFTQGLKGIAAGLDPQEIKAGILLSVEMVYQQLQRQAIELQSPKDVLHVAMVA
Sbjct: 1 ALVVIDALFTQGLKGIAAGLDPQEIKAGILLSVEMVYQQLQRQAIELQSPKDVLHVAMVA 60
Query: 61 ANHDVTLGTVVATVISQADLKGVFSSKDSGISKTRGLGKRVKSGYLSPYFVTRPETMDVV 120
ANHDVTLGTVVATVISQADLKGVFSSKDSGISKTRGLGKRVKSGYLSPYFVTRPETMDVV
Sbjct: 61 ANHDVTLGTVVATVISQADLKGVFSSKDSGISKTRGLGKRVKSGYLSPYFVTRPETMDVV 120
Query: 121 WEEALVLILSHSLVSLSEELIRYLELISEQNTHPLVIIAEDFDQNVLRTLILNKLRNGLP 180
WEEALVLILSHSLVSLSEELIRYLELISEQNTHPLVIIAEDFDQNVLRTLILNKLRNGLP
Sbjct: 121 WEEALVLILSHSLVSLSEELIRYLELISEQNTHPLVIIAEDFDQNVLRTLILNKLRNGLP 180
Query: 181 VCAV 184
VCAV
Sbjct: 181 VCAV 184
>b31401 WP_100934374 Candidatus Chlamydia corallus G3/2742-324
Length = 183
Score = 305 bits (780), Expect = e-108, Method: Compositional matrix adjust.
Identities = 150/183 (81%), Positives = 167/183 (91%), Gaps = 1/183 (0%)
Query: 2 LVVIDALFTQGLKGIAAGLDPQEIKAGILLSVEMVYQQLQRQAIELQSPKDVLHVAMVAA 61
LV+IDALFT GLKGIAAGLDPQEIKAGILLSVEMV+Q+LQ+QAI+LQS +DVLHVA ++A
Sbjct: 2 LVLIDALFTHGLKGIAAGLDPQEIKAGILLSVEMVHQKLQKQAIKLQSLEDVLHVAKISA 61
Query: 62 NHDVTLGTVVATVISQADLKGVFSSKDSGISKTRGLGKRVKSGYLSPYFVTRPETMDVVW 121
NHDV+LG +VAT + QAD KGVFSS++ + K LGKRVKSGYLSPYFVTRPETMDVVW
Sbjct: 62 NHDVSLGKMVATAVFQADPKGVFSSEERELKKF-ALGKRVKSGYLSPYFVTRPETMDVVW 120
Query: 122 EEALVLILSHSLVSLSEELIRYLELISEQNTHPLVIIAEDFDQNVLRTLILNKLRNGLPV 181
EEA VLILSHSLVSL+EELI+YLELISEQN HPL+IIAEDFDQNVLRTLILNKLRNG PV
Sbjct: 121 EEAFVLILSHSLVSLNEELIQYLELISEQNAHPLIIIAEDFDQNVLRTLILNKLRNGFPV 180
Query: 182 CAV 184
CAV
Sbjct: 181 CAV 183
>b4032 NP_829841 Chlamydophila caviae GPIC ATCC VR-813
Length = 187
Score = 171 bits (433), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 127/189 (67%), Gaps = 7/189 (3%)
Query: 1 ALVVIDALFTQGLKGIAAGLDPQEIKAGILLSVEMVYQQLQRQAIELQSPKDVLHVAMVA 60
A+V+ DALF GLKG+A GLDP EIK GI L+ M+ ++L + +++ +D+ H+A +
Sbjct: 1 AIVLTDALFASGLKGVAVGLDPLEIKQGIQLAGAMLDEELAKLVVKISESEDIFHIATSS 60
Query: 61 ANHDVTLGTVVATVISQADLKGVFSSKD-----SGISKTRGLGKRVKSGYLSPYFVTRPE 115
ANHD +G ++A I+Q ++GV S K+ + + TR +G + SGYLS YFVT PE
Sbjct: 61 ANHDAAIGKILADAIAQIGIEGVLSIKEGRGTETTLQATRHVG--LNSGYLSSYFVTHPE 118
Query: 116 TMDVVWEEALVLILSHSLVSLSEELIRYLELISEQNTHPLVIIAEDFDQNVLRTLILNKL 175
TM+V++E+A +L+ + +L L++ I +LE + N PL+IIAEDFD +L LI+NKL
Sbjct: 119 TMEVIYEDASILLCNQALSCLNQSFIHFLEQTFQTNRKPLIIIAEDFDPELLSILIVNKL 178
Query: 176 RNGLPVCAV 184
+ LPVCA+
Sbjct: 179 KGNLPVCAI 187
>b21033 AFS25323 Chlamydia psittaci M56
Length = 187
Score = 167 bits (422), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 130/189 (68%), Gaps = 7/189 (3%)
Query: 1 ALVVIDALFTQGLKGIAAGLDPQEIKAGILLSVEMVYQQLQRQAIELQSPKDVLHVAMVA 60
A+V+IDALF+ GLKG+A GLDP EIK GI L+ EM+ Q+L + IE +DVL +A ++
Sbjct: 1 AVVLIDALFSSGLKGVAVGLDPLEIKQGIHLAGEMLDQELTKLVIEADPKEDVLQIATIS 60
Query: 61 ANHDVTLGTVVATVISQADLKGVFS-----SKDSGISKTRGLGKRVKSGYLSPYFVTRPE 115
AN+D +G +++ I+ ++GV S +K++ + T +G + +GYLSPYFVT PE
Sbjct: 61 ANNDPLIGRLISDAIATVGIEGVISIKEGTNKETTLKATTDVG--LNAGYLSPYFVTHPE 118
Query: 116 TMDVVWEEALVLILSHSLVSLSEELIRYLELISEQNTHPLVIIAEDFDQNVLRTLILNKL 175
TM+VV+E A +L+ + +L L++ I +L+ + + +PL+IIAEDFD +L LI+NKL
Sbjct: 119 TMEVVYENASILLCNQTLSCLNQAFIHFLDQTFQTSKNPLIIIAEDFDPQLLSILIVNKL 178
Query: 176 RNGLPVCAV 184
+ LP+CA+
Sbjct: 179 KGELPICAI 187
>b8483 BAE80805 Chlamydophila felis Fe/C-56
Length = 187
Score = 165 bits (417), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 83/187 (44%), Positives = 125/187 (66%), Gaps = 3/187 (1%)
Query: 1 ALVVIDALFTQGLKGIAAGLDPQEIKAGILLSVEMVYQQLQRQAIELQSPKDVLHVAMVA 60
A+++ DALF+ GLKG+A GLDP EIK GI L+ EM+ ++L + A++ + +D H+A +
Sbjct: 1 AVILTDALFSSGLKGVAVGLDPLEIKQGIHLAGEMLDKELTKLAVKRKPAEDSFHIATTS 60
Query: 61 ANHDVTLGTVVATVISQADLKGVFSSK-DSGISKTRGLGKRV--KSGYLSPYFVTRPETM 117
AN+D +G +++ I+ ++GVFS K +G T V SGYLSPYFVT PETM
Sbjct: 61 ANNDPAIGKIISDAIAAVGVEGVFSIKLGTGEETTLEASSHVGFNSGYLSPYFVTHPETM 120
Query: 118 DVVWEEALVLILSHSLVSLSEELIRYLELISEQNTHPLVIIAEDFDQNVLRTLILNKLRN 177
+V++E+A +L+ + L L++ I +L+ + + PL+IIAEDFD +L LI+NKLR
Sbjct: 121 EVIYEDASILLCNQKLSCLNQSFIHFLDQTFQTSRAPLIIIAEDFDPQLLSILIVNKLRA 180
Query: 178 GLPVCAV 184
LPVCA+
Sbjct: 181 NLPVCAI 187
>b23022 YP_007438707 Chlamydophila psittaci Mat116
Length = 187
Score = 164 bits (416), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 129/189 (68%), Gaps = 7/189 (3%)
Query: 1 ALVVIDALFTQGLKGIAAGLDPQEIKAGILLSVEMVYQQLQRQAIELQSPKDVLHVAMVA 60
A+V+IDALF+ GLKG+A GLDP EIK GI L+ EM+ ++L + IE +DVL +A +
Sbjct: 1 AVVLIDALFSSGLKGVAVGLDPLEIKQGIHLAGEMLDKELTKLVIEADPKEDVLQIATTS 60
Query: 61 ANHDVTLGTVVATVISQADLKGVFS-----SKDSGISKTRGLGKRVKSGYLSPYFVTRPE 115
AN+D +G +++ I+ ++GV S +K++ + T +G + +GYLSPYFVT PE
Sbjct: 61 ANNDPLIGRLISDAIATVGIEGVISIKEGTNKETTLKATTDVG--LNAGYLSPYFVTHPE 118
Query: 116 TMDVVWEEALVLILSHSLVSLSEELIRYLELISEQNTHPLVIIAEDFDQNVLRTLILNKL 175
TM+VV+E A +L+ + +L L++ I +L+ + + +PL+IIAEDFD +L LI+NKL
Sbjct: 119 TMEVVYENASILLCNQTLSCLNQAFIHFLDQTFQTSKNPLIIIAEDFDPQLLSILIVNKL 178
Query: 176 RNGLPVCAV 184
+ LP+CA+
Sbjct: 179 KGELPICAI 187
>b21712 YP_006974848 Chlamydia psittaci 01DC12
Length = 187
Score = 164 bits (416), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 129/189 (68%), Gaps = 7/189 (3%)
Query: 1 ALVVIDALFTQGLKGIAAGLDPQEIKAGILLSVEMVYQQLQRQAIELQSPKDVLHVAMVA 60
A+V+IDALF+ GLKG+A GLDP EIK GI L+ EM+ ++L + IE +DVL +A +
Sbjct: 1 AVVLIDALFSSGLKGVAVGLDPLEIKQGIHLAGEMLDKELTKLVIEADPKEDVLQIATTS 60
Query: 61 ANHDVTLGTVVATVISQADLKGVFS-----SKDSGISKTRGLGKRVKSGYLSPYFVTRPE 115
AN+D +G +++ I+ ++GV S +K++ + T +G + +GYLSPYFVT PE
Sbjct: 61 ANNDPLIGRLISDAIATVGIEGVISIKEGTNKETTLKATTDVG--LNAGYLSPYFVTHPE 118
Query: 116 TMDVVWEEALVLILSHSLVSLSEELIRYLELISEQNTHPLVIIAEDFDQNVLRTLILNKL 175
TM+VV+E A +L+ + +L L++ I +L+ + + +PL+IIAEDFD +L LI+NKL
Sbjct: 119 TMEVVYENASILLCNQTLSCLNQAFIHFLDQTFQTSKNPLIIIAEDFDPQLLSILIVNKL 178
Query: 176 RNGLPVCAV 184
+ LP+CA+
Sbjct: 179 KGELPICAI 187
>b21045 AFS21115 Chlamydia psittaci GR9
Length = 187
Score = 164 bits (416), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 129/189 (68%), Gaps = 7/189 (3%)
Query: 1 ALVVIDALFTQGLKGIAAGLDPQEIKAGILLSVEMVYQQLQRQAIELQSPKDVLHVAMVA 60
A+V+IDALF+ GLKG+A GLDP EIK GI L+ EM+ ++L + IE +DVL +A +
Sbjct: 1 AVVLIDALFSSGLKGVAVGLDPLEIKQGIHLAGEMLDKELTKLVIEADPKEDVLQIATTS 60
Query: 61 ANHDVTLGTVVATVISQADLKGVFS-----SKDSGISKTRGLGKRVKSGYLSPYFVTRPE 115
AN+D +G +++ I+ ++GV S +K++ + T +G + +GYLSPYFVT PE
Sbjct: 61 ANNDPLIGRLISDAIATVGIEGVISIKEGTNKETTLKATTDVG--LNAGYLSPYFVTHPE 118
Query: 116 TMDVVWEEALVLILSHSLVSLSEELIRYLELISEQNTHPLVIIAEDFDQNVLRTLILNKL 175
TM+VV+E A +L+ + +L L++ I +L+ + + +PL+IIAEDFD +L LI+NKL
Sbjct: 119 TMEVVYENASILLCNQTLSCLNQAFIHFLDQTFQTSKNPLIIIAEDFDPQLLSILIVNKL 178
Query: 176 RNGLPVCAV 184
+ LP+CA+
Sbjct: 179 KGELPICAI 187
>b21042 AFS21694 Chlamydia psittaci MN
Length = 187
Score = 164 bits (416), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 129/189 (68%), Gaps = 7/189 (3%)
Query: 1 ALVVIDALFTQGLKGIAAGLDPQEIKAGILLSVEMVYQQLQRQAIELQSPKDVLHVAMVA 60
A+V+IDALF+ GLKG+A GLDP EIK GI L+ EM+ ++L + IE +DVL +A +
Sbjct: 1 AVVLIDALFSSGLKGVAVGLDPLEIKQGIHLAGEMLDKELTKLVIEADPKEDVLQIATTS 60
Query: 61 ANHDVTLGTVVATVISQADLKGVFS-----SKDSGISKTRGLGKRVKSGYLSPYFVTRPE 115
AN+D +G +++ I+ ++GV S +K++ + T +G + +GYLSPYFVT PE
Sbjct: 61 ANNDPLIGRLISDAIATVGIEGVISIKEGTNKETTLKATTDVG--LNAGYLSPYFVTHPE 118
Query: 116 TMDVVWEEALVLILSHSLVSLSEELIRYLELISEQNTHPLVIIAEDFDQNVLRTLILNKL 175
TM+VV+E A +L+ + +L L++ I +L+ + + +PL+IIAEDFD +L LI+NKL
Sbjct: 119 TMEVVYENASILLCNQTLSCLNQAFIHFLDQTFQTSKNPLIIIAEDFDPQLLSILIVNKL 178
Query: 176 RNGLPVCAV 184
+ LP+CA+
Sbjct: 179 KGELPICAI 187
>b21039 AFS23255 Chlamydia psittaci VS225
Length = 187
Score = 164 bits (416), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 129/189 (68%), Gaps = 7/189 (3%)
Query: 1 ALVVIDALFTQGLKGIAAGLDPQEIKAGILLSVEMVYQQLQRQAIELQSPKDVLHVAMVA 60
A+V+IDALF+ GLKG+A GLDP EIK GI L+ EM+ ++L + IE +DVL +A +
Sbjct: 1 AVVLIDALFSSGLKGVAVGLDPLEIKQGIHLAGEMLDKELTKLVIEADPKEDVLQIATTS 60
Query: 61 ANHDVTLGTVVATVISQADLKGVFS-----SKDSGISKTRGLGKRVKSGYLSPYFVTRPE 115
AN+D +G +++ I+ ++GV S +K++ + T +G + +GYLSPYFVT PE
Sbjct: 61 ANNDPLIGRLISDAIATVGIEGVISIKEGTNKETTLKATTDVG--LNAGYLSPYFVTHPE 118
Query: 116 TMDVVWEEALVLILSHSLVSLSEELIRYLELISEQNTHPLVIIAEDFDQNVLRTLILNKL 175
TM+VV+E A +L+ + +L L++ I +L+ + + +PL+IIAEDFD +L LI+NKL
Sbjct: 119 TMEVVYENASILLCNQTLSCLNQAFIHFLDQTFQTSKNPLIIIAEDFDPQLLSILIVNKL 178
Query: 176 RNGLPVCAV 184
+ LP+CA+
Sbjct: 179 KGELPICAI 187
>b21036 AFS24269 Chlamydia psittaci WS/RT/E30
Length = 187
Score = 164 bits (416), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 129/189 (68%), Gaps = 7/189 (3%)
Query: 1 ALVVIDALFTQGLKGIAAGLDPQEIKAGILLSVEMVYQQLQRQAIELQSPKDVLHVAMVA 60
A+V+IDALF+ GLKG+A GLDP EIK GI L+ EM+ ++L + IE +DVL +A +
Sbjct: 1 AVVLIDALFSSGLKGVAVGLDPLEIKQGIHLAGEMLDKELTKLVIEADPKEDVLQIATTS 60
Query: 61 ANHDVTLGTVVATVISQADLKGVFS-----SKDSGISKTRGLGKRVKSGYLSPYFVTRPE 115
AN+D +G +++ I+ ++GV S +K++ + T +G + +GYLSPYFVT PE
Sbjct: 61 ANNDPLIGRLISDAIATVGIEGVISIKEGTNKETTLKATTDVG--LNAGYLSPYFVTHPE 118
Query: 116 TMDVVWEEALVLILSHSLVSLSEELIRYLELISEQNTHPLVIIAEDFDQNVLRTLILNKL 175
TM+VV+E A +L+ + +L L++ I +L+ + + +PL+IIAEDFD +L LI+NKL
Sbjct: 119 TMEVVYENASILLCNQTLSCLNQAFIHFLDQTFQTSKNPLIIIAEDFDPQLLSILIVNKL 178
Query: 176 RNGLPVCAV 184
+ LP+CA+
Sbjct: 179 KGELPICAI 187
>b21027 AFS27500 Chlamydia psittaci CP3 ATCC VR-574
Length = 187
Score = 164 bits (416), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 129/189 (68%), Gaps = 7/189 (3%)
Query: 1 ALVVIDALFTQGLKGIAAGLDPQEIKAGILLSVEMVYQQLQRQAIELQSPKDVLHVAMVA 60
A+V+IDALF+ GLKG+A GLDP EIK GI L+ EM+ ++L + IE +DVL +A +
Sbjct: 1 AVVLIDALFSSGLKGVAVGLDPLEIKQGIHLAGEMLDKELTKLVIEADPKEDVLQIATTS 60
Query: 61 ANHDVTLGTVVATVISQADLKGVFS-----SKDSGISKTRGLGKRVKSGYLSPYFVTRPE 115
AN+D +G +++ I+ ++GV S +K++ + T +G + +GYLSPYFVT PE
Sbjct: 61 ANNDPLIGRLISDAIATVGIEGVISIKEGTNKETTLKATTDVG--LNAGYLSPYFVTHPE 118
Query: 116 TMDVVWEEALVLILSHSLVSLSEELIRYLELISEQNTHPLVIIAEDFDQNVLRTLILNKL 175
TM+VV+E A +L+ + +L L++ I +L+ + + +PL+IIAEDFD +L LI+NKL
Sbjct: 119 TMEVVYENASILLCNQTLSCLNQAFIHFLDQTFQTSKNPLIIIAEDFDPQLLSILIVNKL 178
Query: 176 RNGLPVCAV 184
+ LP+CA+
Sbjct: 179 KGELPICAI 187
>b21024 AFS28547 Chlamydia psittaci NJ1
Length = 187
Score = 164 bits (416), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 129/189 (68%), Gaps = 7/189 (3%)
Query: 1 ALVVIDALFTQGLKGIAAGLDPQEIKAGILLSVEMVYQQLQRQAIELQSPKDVLHVAMVA 60
A+V+IDALF+ GLKG+A GLDP EIK GI L+ EM+ ++L + IE +DVL +A +
Sbjct: 1 AVVLIDALFSSGLKGVAVGLDPLEIKQGIHLAGEMLDKELTKLVIEADPKEDVLQIATTS 60
Query: 61 ANHDVTLGTVVATVISQADLKGVFS-----SKDSGISKTRGLGKRVKSGYLSPYFVTRPE 115
AN+D +G +++ I+ ++GV S +K++ + T +G + +GYLSPYFVT PE
Sbjct: 61 ANNDPLIGRLISDAIATVGIEGVISIKEGTNKETTLKATTDVG--LNAGYLSPYFVTHPE 118
Query: 116 TMDVVWEEALVLILSHSLVSLSEELIRYLELISEQNTHPLVIIAEDFDQNVLRTLILNKL 175
TM+VV+E A +L+ + +L L++ I +L+ + + +PL+IIAEDFD +L LI+NKL
Sbjct: 119 TMEVVYENASILLCNQTLSCLNQAFIHFLDQTFQTSKNPLIIIAEDFDPQLLSILIVNKL 178
Query: 176 RNGLPVCAV 184
+ LP+CA+
Sbjct: 179 KGELPICAI 187
>b21048 AFS20070 Chlamydia psittaci 84/55
Length = 187
Score = 164 bits (415), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 129/189 (68%), Gaps = 7/189 (3%)
Query: 1 ALVVIDALFTQGLKGIAAGLDPQEIKAGILLSVEMVYQQLQRQAIELQSPKDVLHVAMVA 60
A+V+IDALF+ GLKG+A GLDP EIK GI L+ EM+ ++L + IE +DVL +A +
Sbjct: 1 AVVLIDALFSSGLKGVAVGLDPLEIKQGIHLAGEMLDKELTKLVIEADPKEDVLQIATTS 60
Query: 61 ANHDVTLGTVVATVISQADLKGVFS-----SKDSGISKTRGLGKRVKSGYLSPYFVTRPE 115
AN+D +G +++ I+ ++GV S +K++ + T +G + +GYLSPYFVT PE
Sbjct: 61 ANNDPLIGRLISDAIATVGIEGVISIKEGTNKETTLKATTDVG--LNAGYLSPYFVTHPE 118
Query: 116 TMDVVWEEALVLILSHSLVSLSEELIRYLELISEQNTHPLVIIAEDFDQNVLRTLILNKL 175
TM+V++E A +L+ + +L L++ I +L+ + + +PL+IIAEDFD +L LI+NKL
Sbjct: 119 TMEVIYENASILLCNQTLSCLNQAFIHFLDQTFQTSKNPLIIIAEDFDPQLLSILIVNKL 178
Query: 176 RNGLPVCAV 184
+ LP+CA+
Sbjct: 179 KGELPICAI 187
>b19089 AEG86004 Chlamydophila psittaci C19/98
Length = 187
Score = 164 bits (415), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 129/189 (68%), Gaps = 7/189 (3%)
Query: 1 ALVVIDALFTQGLKGIAAGLDPQEIKAGILLSVEMVYQQLQRQAIELQSPKDVLHVAMVA 60
A+V+IDALF+ GLKG+A GLDP EIK GI L+ EM+ ++L + IE +DVL +A +
Sbjct: 1 AVVLIDALFSSGLKGVAVGLDPLEIKQGIHLAGEMLDKELTKLVIEADPKEDVLQIATTS 60
Query: 61 ANHDVTLGTVVATVISQADLKGVFS-----SKDSGISKTRGLGKRVKSGYLSPYFVTRPE 115
AN+D +G +++ I+ ++GV S +K++ + T +G + +GYLSPYFVT PE
Sbjct: 61 ANNDPLIGRLISDAIATVGIEGVISIKEGTNKETTLKATTDVG--LNAGYLSPYFVTHPE 118
Query: 116 TMDVVWEEALVLILSHSLVSLSEELIRYLELISEQNTHPLVIIAEDFDQNVLRTLILNKL 175
TM+V++E A +L+ + +L L++ I +L+ + + +PL+IIAEDFD +L LI+NKL
Sbjct: 119 TMEVIYENASILLCNQTLSCLNQAFIHFLDQTFQTSKNPLIIIAEDFDPQLLSILIVNKL 178
Query: 176 RNGLPVCAV 184
+ LP+CA+
Sbjct: 179 KGELPICAI 187
Database: reference_a_ut
Posted date: Jul 22, 2024 1:00 AM
Number of letters in database: 3,477,153
Number of sequences in database: 18,818
Lambda K H
0.319 0.136 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 18818
Number of Hits to DB: 1,541,697
Number of extensions: 102819
Number of successful extensions: 51610
Number of sequences better than 10.0: 18734
Number of HSP's gapped: 18776
Number of HSP's successfully gapped: 18739
Length of query: 184
Length of database: 3,477,153
Length adjustment: 83
Effective length of query: 101
Effective length of database: 1,915,259
Effective search space: 193441159
Effective search space used: 193441159
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)