/var/www/html/cpndb/fasta_results/b14421.fasta# /data/www/cpndb/fasta35 -E 200 -Q -m 6 -b 20 -d 20 -z 2 -H /data/www/cpndb/fasta_results/b14421 /data/www/cpndb/blastDBs/reference_a_nut
<pre>
FASTA searches a protein or DNA sequence data bank
 version 35.03 Feb. 18, 2008
Please cite:
 W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

</pre>
Query: /data/www/cpndb/fasta_results/b14421
<pre>
  1>>>b14421 552 nt - 552 nt
Library: /data/www/cpndb/blastDBs/reference_a_nut 10433008 residues in 18820 sequences

10433008 residues in 18820 sequences
Statistics: MLE_cen statistics: Lambda= 0.0033;  K=2.509e-05 (cen=941)
Algorithm: FASTA (3.5 Sept 2006) [optimized]
Parameters: +5/-4 matrix (5:-4) ktup: 6
 join: 51, opt: 36, open/ext: -12/-4, width:  16
 Scan time:  2.230
</pre>
<p>
<hr>
<p>
<p><pre>

The best scores are:                                      opt bits E(18820)
<a onClick="window.open('getRecord.php?id=b317',
                                'cpndb_record'); return false;" href="getRecord.php?id=b317" target=_"blank">b317</a> AF237424 Streptococcus suis sero2 735     ( 552) [f] 2760 28.6      15 <A HREF="#b317">align</A>
<a onClick="window.open('getRecord.php?id=b330',
                                'cpndb_record'); return false;" href="getRecord.php?id=b330" target=_"blank">b330</a> AF237437 Streptococcus suis sero15 NCTC10 ( 552) [f] 2760 28.6      15 <A HREF="#b330">align</A>
<a onClick="window.open('getRecord.php?id=b22893',
                                'cpndb_record'); return false;" href="getRecord.php?id=b22893" target=_"blank">b22893</a> NC_018526 Streptococcus suis S735       ( 552) [f] 2760 28.6      15 <A HREF="#b22893">align</A>
<a onClick="window.open('getRecord.php?id=v5172',
                                'cpndb_record'); return false;" href="getRecord.php?id=v5172" target=_"blank">v5172</a> 3909 Streptococcus suis ATCC 43765       ( 552) [f] 2760 28.6      15 <A HREF="#v5172">align</A>
<a onClick="window.open('getRecord.php?id=b329',
                                'cpndb_record'); return false;" href="getRecord.php?id=b329" target=_"blank">b329</a> AF237436 Streptococcus suis sero14 13730  ( 552) [f] 2760 28.6      15 <A HREF="#b329">align</A>
<a onClick="window.open('getRecord.php?id=b19864',
                                'cpndb_record'); return false;" href="getRecord.php?id=b19864" target=_"blank">b19864</a> CP002640 Streptococcus suis SS12        ( 552) [f] 2760 28.6      15 <A HREF="#b19864">align</A>
<a onClick="window.open('getRecord.php?id=b19874',
                                'cpndb_record'); return false;" href="getRecord.php?id=b19874" target=_"blank">b19874</a> CP002570  Streptococcus suis A7         ( 552) [f] 2760 28.6      15 <A HREF="#b19874">align</A>
<a onClick="window.open('getRecord.php?id=b18453',
                                'cpndb_record'); return false;" href="getRecord.php?id=b18453" target=_"blank">b18453</a> CP002465 Streptococcus suis JS14        ( 552) [f] 2760 28.6      15 <A HREF="#b18453">align</A>
<a onClick="window.open('getRecord.php?id=b323',
                                'cpndb_record'); return false;" href="getRecord.php?id=b323" target=_"blank">b323</a> AF237430 Streptococcus suis sero8 14636   ( 552) [f] 2679 28.2      19 <A HREF="#b323">align</A>
<a onClick="window.open('getRecord.php?id=b28243',
                                'cpndb_record'); return false;" href="getRecord.php?id=b28243" target=_"blank">b28243</a> NC_022665 Streptococcus  suis  T15      ( 552) [f] 2670 28.1      20 <A HREF="#b28243">align</A>
<a onClick="window.open('getRecord.php?id=b328',
                                'cpndb_record'); return false;" href="getRecord.php?id=b328" target=_"blank">b328</a> AF237435 Streptococcus suis sero13 10581  ( 552) [f] 2625 27.9      23 <A HREF="#b328">align</A>
<a onClick="window.open('getRecord.php?id=b325',
                                'cpndb_record'); return false;" href="getRecord.php?id=b325" target=_"blank">b325</a> AF237432 Streptococcus suis sero10 4417   ( 552) [f] 2575 27.7      27 <A HREF="#b325">align</A>
<a onClick="window.open('getRecord.php?id=b19862',
                                'cpndb_record'); return false;" href="getRecord.php?id=b19862" target=_"blank">b19862</a> CP002644 Streptococcus suis D12         ( 552) [f] 2575 27.7      27 <A HREF="#b19862">align</A>
<a onClick="window.open('getRecord.php?id=b320',
                                'cpndb_record'); return false;" href="getRecord.php?id=b320" target=_"blank">b320</a> AF237427 Streptococcus suis sero5 11538   ( 552) [f] 2557 27.6      29 <A HREF="#b320">align</A>
<a onClick="window.open('getRecord.php?id=b335',
                                'cpndb_record'); return false;" href="getRecord.php?id=b335" target=_"blank">b335</a> AF237442 Streptococcus suis sero1/2 2651  ( 552) [f] 2557 27.6      29 <A HREF="#b335">align</A>
<a onClick="window.open('getRecord.php?id=b319',
                                'cpndb_record'); return false;" href="getRecord.php?id=b319" target=_"blank">b319</a> AF237426 Streptococcus suis sero4 6407    ( 552) [f] 2548 27.5      29 <A HREF="#b319">align</A>
<a onClick="window.open('getRecord.php?id=b340',
                                'cpndb_record'); return false;" href="getRecord.php?id=b340" target=_"blank">b340</a> AF237447 Streptococcus suis sero24 88-529 ( 552) [f] 2535 27.5      31 <A HREF="#b340">align</A>
<a onClick="window.open('getRecord.php?id=b326',
                                'cpndb_record'); return false;" href="getRecord.php?id=b326" target=_"blank">b326</a> AF237433 Streptococcus suis sero11 12814  ( 552) [f] 2494 27.3      35 <A HREF="#b326">align</A>
<a onClick="window.open('getRecord.php?id=b332',
                                'cpndb_record'); return false;" href="getRecord.php?id=b332" target=_"blank">b332</a> AF237439 Streptococcus suis sero17 93A    ( 552) [f] 2481 27.2      37 <A HREF="#b332">align</A>
<a onClick="window.open('getRecord.php?id=b334',
                                'cpndb_record'); return false;" href="getRecord.php?id=b334" target=_"blank">b334</a> AF237441 Streptococcus suis sero19 42A    ( 552) [f] 2481 27.2      37 <A HREF="#b334">align</A>
</pre><p><hr><p>

>>>b14421, 552 nt vs /data/www/cpndb/blastDBs/reference_a_nut library

<A name=b317>
<pre>
>><a onClick="window.open('getRecord.php?id=b317',
                                'cpndb_record'); return false;" href="getRecord.php?id=b317" target=_"blank">b317</a> AF237424 Streptococcus suis sero2 735              (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 101.4  bits: 28.6 E():   15
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b14421 GCTACTGTCTTGACCCAAGCTATCGTACGTGAAGGCTTGAAAAACGTAACTGCAGGTGCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b317   GCTACTGTCTTGACCCAAGCTATCGTACGTGAAGGCTTGAAAAACGTAACTGCAGGTGCC
               10        20        30        40        50        60

               70        80        90       100       110       120
b14421 AACCCAATCGGAATTCGTCGCGGGATTGAAGCCGCGGTTGCGACTGCGGTTGAAGCCTTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b317   AACCCAATCGGAATTCGTCGCGGGATTGAAGCCGCGGTTGCGACTGCGGTTGAAGCCTTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b14421 AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCCGTGTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b317   AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCCGTGTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b14421 TCACGTTCTGAAAAAGTTGGTGAGTACATTTCAGAAGCTATGGAGCGCGTGGGAACAGAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b317   TCACGTTCTGAAAAAGTTGGTGAGTACATTTCAGAAGCTATGGAGCGCGTGGGAACAGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b14421 GGCGTTATTACTATCGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b317   GGCGTTATTACTATCGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b14421 ATGCAATTCGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAAAAGATGGTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b317   ATGCAATTCGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAAAAGATGGTA
              310       320       330       340       350       360

              370       380       390       400       410       420
b14421 GCTGAACTTGAAAATCCATTTATCTTGATTACAGATAAGAAGATTTCTCATATCCAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b317   GCTGAACTTGAAAATCCATTTATCTTGATTACAGATAAGAAGATTTCTCATATCCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b14421 ATTTTGCCACTCTTGGAAAGCATTCTTCAGGCCAACCGTCCGCTTTTGATTATTGCTGAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b317   ATTTTGCCACTCTTGGAAAGCATTCTTCAGGCCAACCGTCCGCTTTTGATTATTGCTGAC
              430       440       450       460       470       480

              490       500       510       520       530       540
b14421 GATGTGGATGGCGAAGCTCTTCCTACACTTGTTCTCAACAAGATTCGTGGTACATTCAAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b317   GATGTGGATGGCGAAGCTCTTCCTACACTTGTTCTCAACAAGATTCGTGGTACATTCAAC
              490       500       510       520       530       540

              550  
b14421 GTTGTTGCAGTC
       ::::::::::::
b317   GTTGTTGCAGTC
              550  

</pre>
<hr>
<A name=b330>
<pre>
>><a onClick="window.open('getRecord.php?id=b330',
                                'cpndb_record'); return false;" href="getRecord.php?id=b330" target=_"blank">b330</a> AF237437 Streptococcus suis sero15 NCTC1046        (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 101.4  bits: 28.6 E():   15
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b14421 GCTACTGTCTTGACCCAAGCTATCGTACGTGAAGGCTTGAAAAACGTAACTGCAGGTGCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b330   GCTACTGTCTTGACCCAAGCTATCGTACGTGAAGGCTTGAAAAACGTAACTGCAGGTGCC
               10        20        30        40        50        60

               70        80        90       100       110       120
b14421 AACCCAATCGGAATTCGTCGCGGGATTGAAGCCGCGGTTGCGACTGCGGTTGAAGCCTTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b330   AACCCAATCGGAATTCGTCGCGGGATTGAAGCCGCGGTTGCGACTGCGGTTGAAGCCTTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b14421 AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCCGTGTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b330   AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCCGTGTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b14421 TCACGTTCTGAAAAAGTTGGTGAGTACATTTCAGAAGCTATGGAGCGCGTGGGAACAGAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b330   TCACGTTCTGAAAAAGTTGGTGAGTACATTTCAGAAGCTATGGAGCGCGTGGGAACAGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b14421 GGCGTTATTACTATCGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b330   GGCGTTATTACTATCGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b14421 ATGCAATTCGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAAAAGATGGTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b330   ATGCAATTCGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAAAAGATGGTA
              310       320       330       340       350       360

              370       380       390       400       410       420
b14421 GCTGAACTTGAAAATCCATTTATCTTGATTACAGATAAGAAGATTTCTCATATCCAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b330   GCTGAACTTGAAAATCCATTTATCTTGATTACAGATAAGAAGATTTCTCATATCCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b14421 ATTTTGCCACTCTTGGAAAGCATTCTTCAGGCCAACCGTCCGCTTTTGATTATTGCTGAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b330   ATTTTGCCACTCTTGGAAAGCATTCTTCAGGCCAACCGTCCGCTTTTGATTATTGCTGAC
              430       440       450       460       470       480

              490       500       510       520       530       540
b14421 GATGTGGATGGCGAAGCTCTTCCTACACTTGTTCTCAACAAGATTCGTGGTACATTCAAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b330   GATGTGGATGGCGAAGCTCTTCCTACACTTGTTCTCAACAAGATTCGTGGTACATTCAAC
              490       500       510       520       530       540

              550  
b14421 GTTGTTGCAGTC
       ::::::::::::
b330   GTTGTTGCAGTC
              550  

</pre>
<hr>
<A name=b22893>
<pre>
>><a onClick="window.open('getRecord.php?id=b22893',
                                'cpndb_record'); return false;" href="getRecord.php?id=b22893" target=_"blank">b22893</a> NC_018526 Streptococcus suis S735                (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 101.4  bits: 28.6 E():   15
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b14421 GCTACTGTCTTGACCCAAGCTATCGTACGTGAAGGCTTGAAAAACGTAACTGCAGGTGCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b22893 GCTACTGTCTTGACCCAAGCTATCGTACGTGAAGGCTTGAAAAACGTAACTGCAGGTGCC
               10        20        30        40        50        60

               70        80        90       100       110       120
b14421 AACCCAATCGGAATTCGTCGCGGGATTGAAGCCGCGGTTGCGACTGCGGTTGAAGCCTTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b22893 AACCCAATCGGAATTCGTCGCGGGATTGAAGCCGCGGTTGCGACTGCGGTTGAAGCCTTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b14421 AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCCGTGTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b22893 AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCCGTGTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b14421 TCACGTTCTGAAAAAGTTGGTGAGTACATTTCAGAAGCTATGGAGCGCGTGGGAACAGAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b22893 TCACGTTCTGAAAAAGTTGGTGAGTACATTTCAGAAGCTATGGAGCGCGTGGGAACAGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b14421 GGCGTTATTACTATCGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b22893 GGCGTTATTACTATCGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b14421 ATGCAATTCGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAAAAGATGGTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b22893 ATGCAATTCGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAAAAGATGGTA
              310       320       330       340       350       360

              370       380       390       400       410       420
b14421 GCTGAACTTGAAAATCCATTTATCTTGATTACAGATAAGAAGATTTCTCATATCCAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b22893 GCTGAACTTGAAAATCCATTTATCTTGATTACAGATAAGAAGATTTCTCATATCCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b14421 ATTTTGCCACTCTTGGAAAGCATTCTTCAGGCCAACCGTCCGCTTTTGATTATTGCTGAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b22893 ATTTTGCCACTCTTGGAAAGCATTCTTCAGGCCAACCGTCCGCTTTTGATTATTGCTGAC
              430       440       450       460       470       480

              490       500       510       520       530       540
b14421 GATGTGGATGGCGAAGCTCTTCCTACACTTGTTCTCAACAAGATTCGTGGTACATTCAAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b22893 GATGTGGATGGCGAAGCTCTTCCTACACTTGTTCTCAACAAGATTCGTGGTACATTCAAC
              490       500       510       520       530       540

              550  
b14421 GTTGTTGCAGTC
       ::::::::::::
b22893 GTTGTTGCAGTC
              550  

</pre>
<hr>
<A name=v5172>
<pre>
>><a onClick="window.open('getRecord.php?id=v5172',
                                'cpndb_record'); return false;" href="getRecord.php?id=v5172" target=_"blank">v5172</a> 3909 Streptococcus suis ATCC 43765                (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 101.4  bits: 28.6 E():   15
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b14421 GCTACTGTCTTGACCCAAGCTATCGTACGTGAAGGCTTGAAAAACGTAACTGCAGGTGCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
v5172  GCTACTGTCTTGACCCAAGCTATCGTACGTGAAGGCTTGAAAAACGTAACTGCAGGTGCC
               10        20        30        40        50        60

               70        80        90       100       110       120
b14421 AACCCAATCGGAATTCGTCGCGGGATTGAAGCCGCGGTTGCGACTGCGGTTGAAGCCTTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
v5172  AACCCAATCGGAATTCGTCGCGGGATTGAAGCCGCGGTTGCGACTGCGGTTGAAGCCTTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b14421 AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCCGTGTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
v5172  AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCCGTGTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b14421 TCACGTTCTGAAAAAGTTGGTGAGTACATTTCAGAAGCTATGGAGCGCGTGGGAACAGAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
v5172  TCACGTTCTGAAAAAGTTGGTGAGTACATTTCAGAAGCTATGGAGCGCGTGGGAACAGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b14421 GGCGTTATTACTATCGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
v5172  GGCGTTATTACTATCGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b14421 ATGCAATTCGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAAAAGATGGTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
v5172  ATGCAATTCGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAAAAGATGGTA
              310       320       330       340       350       360

              370       380       390       400       410       420
b14421 GCTGAACTTGAAAATCCATTTATCTTGATTACAGATAAGAAGATTTCTCATATCCAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
v5172  GCTGAACTTGAAAATCCATTTATCTTGATTACAGATAAGAAGATTTCTCATATCCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b14421 ATTTTGCCACTCTTGGAAAGCATTCTTCAGGCCAACCGTCCGCTTTTGATTATTGCTGAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
v5172  ATTTTGCCACTCTTGGAAAGCATTCTTCAGGCCAACCGTCCGCTTTTGATTATTGCTGAC
              430       440       450       460       470       480

              490       500       510       520       530       540
b14421 GATGTGGATGGCGAAGCTCTTCCTACACTTGTTCTCAACAAGATTCGTGGTACATTCAAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
v5172  GATGTGGATGGCGAAGCTCTTCCTACACTTGTTCTCAACAAGATTCGTGGTACATTCAAC
              490       500       510       520       530       540

              550  
b14421 GTTGTTGCAGTC
       ::::::::::::
v5172  GTTGTTGCAGTC
              550  

</pre>
<hr>
<A name=b329>
<pre>
>><a onClick="window.open('getRecord.php?id=b329',
                                'cpndb_record'); return false;" href="getRecord.php?id=b329" target=_"blank">b329</a> AF237436 Streptococcus suis sero14 13730           (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 101.4  bits: 28.6 E():   15
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b14421 GCTACTGTCTTGACCCAAGCTATCGTACGTGAAGGCTTGAAAAACGTAACTGCAGGTGCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b329   GCTACTGTCTTGACCCAAGCTATCGTACGTGAAGGCTTGAAAAACGTAACTGCAGGTGCC
               10        20        30        40        50        60

               70        80        90       100       110       120
b14421 AACCCAATCGGAATTCGTCGCGGGATTGAAGCCGCGGTTGCGACTGCGGTTGAAGCCTTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b329   AACCCAATCGGAATTCGTCGCGGGATTGAAGCCGCGGTTGCGACTGCGGTTGAAGCCTTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b14421 AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCCGTGTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b329   AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCCGTGTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b14421 TCACGTTCTGAAAAAGTTGGTGAGTACATTTCAGAAGCTATGGAGCGCGTGGGAACAGAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b329   TCACGTTCTGAAAAAGTTGGTGAGTACATTTCAGAAGCTATGGAGCGCGTGGGAACAGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b14421 GGCGTTATTACTATCGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b329   GGCGTTATTACTATCGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b14421 ATGCAATTCGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAAAAGATGGTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b329   ATGCAATTCGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAAAAGATGGTA
              310       320       330       340       350       360

              370       380       390       400       410       420
b14421 GCTGAACTTGAAAATCCATTTATCTTGATTACAGATAAGAAGATTTCTCATATCCAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b329   GCTGAACTTGAAAATCCATTTATCTTGATTACAGATAAGAAGATTTCTCATATCCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b14421 ATTTTGCCACTCTTGGAAAGCATTCTTCAGGCCAACCGTCCGCTTTTGATTATTGCTGAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b329   ATTTTGCCACTCTTGGAAAGCATTCTTCAGGCCAACCGTCCGCTTTTGATTATTGCTGAC
              430       440       450       460       470       480

              490       500       510       520       530       540
b14421 GATGTGGATGGCGAAGCTCTTCCTACACTTGTTCTCAACAAGATTCGTGGTACATTCAAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b329   GATGTGGATGGCGAAGCTCTTCCTACACTTGTTCTCAACAAGATTCGTGGTACATTCAAC
              490       500       510       520       530       540

              550  
b14421 GTTGTTGCAGTC
       ::::::::::::
b329   GTTGTTGCAGTC
              550  

</pre>
<hr>
<A name=b19864>
<pre>
>><a onClick="window.open('getRecord.php?id=b19864',
                                'cpndb_record'); return false;" href="getRecord.php?id=b19864" target=_"blank">b19864</a> CP002640 Streptococcus suis SS12                 (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 101.4  bits: 28.6 E():   15
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b14421 GCTACTGTCTTGACCCAAGCTATCGTACGTGAAGGCTTGAAAAACGTAACTGCAGGTGCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19864 GCTACTGTCTTGACCCAAGCTATCGTACGTGAAGGCTTGAAAAACGTAACTGCAGGTGCC
               10        20        30        40        50        60

               70        80        90       100       110       120
b14421 AACCCAATCGGAATTCGTCGCGGGATTGAAGCCGCGGTTGCGACTGCGGTTGAAGCCTTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19864 AACCCAATCGGAATTCGTCGCGGGATTGAAGCCGCGGTTGCGACTGCGGTTGAAGCCTTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b14421 AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCCGTGTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19864 AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCCGTGTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b14421 TCACGTTCTGAAAAAGTTGGTGAGTACATTTCAGAAGCTATGGAGCGCGTGGGAACAGAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19864 TCACGTTCTGAAAAAGTTGGTGAGTACATTTCAGAAGCTATGGAGCGCGTGGGAACAGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b14421 GGCGTTATTACTATCGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19864 GGCGTTATTACTATCGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b14421 ATGCAATTCGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAAAAGATGGTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19864 ATGCAATTCGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAAAAGATGGTA
              310       320       330       340       350       360

              370       380       390       400       410       420
b14421 GCTGAACTTGAAAATCCATTTATCTTGATTACAGATAAGAAGATTTCTCATATCCAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19864 GCTGAACTTGAAAATCCATTTATCTTGATTACAGATAAGAAGATTTCTCATATCCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b14421 ATTTTGCCACTCTTGGAAAGCATTCTTCAGGCCAACCGTCCGCTTTTGATTATTGCTGAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19864 ATTTTGCCACTCTTGGAAAGCATTCTTCAGGCCAACCGTCCGCTTTTGATTATTGCTGAC
              430       440       450       460       470       480

              490       500       510       520       530       540
b14421 GATGTGGATGGCGAAGCTCTTCCTACACTTGTTCTCAACAAGATTCGTGGTACATTCAAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19864 GATGTGGATGGCGAAGCTCTTCCTACACTTGTTCTCAACAAGATTCGTGGTACATTCAAC
              490       500       510       520       530       540

              550  
b14421 GTTGTTGCAGTC
       ::::::::::::
b19864 GTTGTTGCAGTC
              550  

</pre>
<hr>
<A name=b19874>
<pre>
>><a onClick="window.open('getRecord.php?id=b19874',
                                'cpndb_record'); return false;" href="getRecord.php?id=b19874" target=_"blank">b19874</a> CP002570  Streptococcus suis A7                  (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 101.4  bits: 28.6 E():   15
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b14421 GCTACTGTCTTGACCCAAGCTATCGTACGTGAAGGCTTGAAAAACGTAACTGCAGGTGCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19874 GCTACTGTCTTGACCCAAGCTATCGTACGTGAAGGCTTGAAAAACGTAACTGCAGGTGCC
               10        20        30        40        50        60

               70        80        90       100       110       120
b14421 AACCCAATCGGAATTCGTCGCGGGATTGAAGCCGCGGTTGCGACTGCGGTTGAAGCCTTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19874 AACCCAATCGGAATTCGTCGCGGGATTGAAGCCGCGGTTGCGACTGCGGTTGAAGCCTTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b14421 AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCCGTGTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19874 AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCCGTGTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b14421 TCACGTTCTGAAAAAGTTGGTGAGTACATTTCAGAAGCTATGGAGCGCGTGGGAACAGAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19874 TCACGTTCTGAAAAAGTTGGTGAGTACATTTCAGAAGCTATGGAGCGCGTGGGAACAGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b14421 GGCGTTATTACTATCGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19874 GGCGTTATTACTATCGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b14421 ATGCAATTCGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAAAAGATGGTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19874 ATGCAATTCGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAAAAGATGGTA
              310       320       330       340       350       360

              370       380       390       400       410       420
b14421 GCTGAACTTGAAAATCCATTTATCTTGATTACAGATAAGAAGATTTCTCATATCCAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19874 GCTGAACTTGAAAATCCATTTATCTTGATTACAGATAAGAAGATTTCTCATATCCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b14421 ATTTTGCCACTCTTGGAAAGCATTCTTCAGGCCAACCGTCCGCTTTTGATTATTGCTGAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19874 ATTTTGCCACTCTTGGAAAGCATTCTTCAGGCCAACCGTCCGCTTTTGATTATTGCTGAC
              430       440       450       460       470       480

              490       500       510       520       530       540
b14421 GATGTGGATGGCGAAGCTCTTCCTACACTTGTTCTCAACAAGATTCGTGGTACATTCAAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19874 GATGTGGATGGCGAAGCTCTTCCTACACTTGTTCTCAACAAGATTCGTGGTACATTCAAC
              490       500       510       520       530       540

              550  
b14421 GTTGTTGCAGTC
       ::::::::::::
b19874 GTTGTTGCAGTC
              550  

</pre>
<hr>
<A name=b18453>
<pre>
>><a onClick="window.open('getRecord.php?id=b18453',
                                'cpndb_record'); return false;" href="getRecord.php?id=b18453" target=_"blank">b18453</a> CP002465 Streptococcus suis JS14                 (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 101.4  bits: 28.6 E():   15
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b14421 GCTACTGTCTTGACCCAAGCTATCGTACGTGAAGGCTTGAAAAACGTAACTGCAGGTGCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18453 GCTACTGTCTTGACCCAAGCTATCGTACGTGAAGGCTTGAAAAACGTAACTGCAGGTGCC
               10        20        30        40        50        60

               70        80        90       100       110       120
b14421 AACCCAATCGGAATTCGTCGCGGGATTGAAGCCGCGGTTGCGACTGCGGTTGAAGCCTTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18453 AACCCAATCGGAATTCGTCGCGGGATTGAAGCCGCGGTTGCGACTGCGGTTGAAGCCTTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b14421 AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCCGTGTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18453 AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCCGTGTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b14421 TCACGTTCTGAAAAAGTTGGTGAGTACATTTCAGAAGCTATGGAGCGCGTGGGAACAGAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18453 TCACGTTCTGAAAAAGTTGGTGAGTACATTTCAGAAGCTATGGAGCGCGTGGGAACAGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b14421 GGCGTTATTACTATCGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18453 GGCGTTATTACTATCGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b14421 ATGCAATTCGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAAAAGATGGTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18453 ATGCAATTCGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAAAAGATGGTA
              310       320       330       340       350       360

              370       380       390       400       410       420
b14421 GCTGAACTTGAAAATCCATTTATCTTGATTACAGATAAGAAGATTTCTCATATCCAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18453 GCTGAACTTGAAAATCCATTTATCTTGATTACAGATAAGAAGATTTCTCATATCCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b14421 ATTTTGCCACTCTTGGAAAGCATTCTTCAGGCCAACCGTCCGCTTTTGATTATTGCTGAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18453 ATTTTGCCACTCTTGGAAAGCATTCTTCAGGCCAACCGTCCGCTTTTGATTATTGCTGAC
              430       440       450       460       470       480

              490       500       510       520       530       540
b14421 GATGTGGATGGCGAAGCTCTTCCTACACTTGTTCTCAACAAGATTCGTGGTACATTCAAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18453 GATGTGGATGGCGAAGCTCTTCCTACACTTGTTCTCAACAAGATTCGTGGTACATTCAAC
              490       500       510       520       530       540

              550  
b14421 GTTGTTGCAGTC
       ::::::::::::
b18453 GTTGTTGCAGTC
              550  

</pre>
<hr>
<A name=b323>
<pre>
>><a onClick="window.open('getRecord.php?id=b323',
                                'cpndb_record'); return false;" href="getRecord.php?id=b323" target=_"blank">b323</a> AF237430 Streptococcus suis sero8 14636            (552 nt)
 initn: 2679 init1: 2679 opt: 2679  Z-score: 99.3  bits: 28.2 E():   19
banded Smith-Waterman score: 2679; 98.4% identity (98.4% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b14421 GCTACTGTCTTGACCCAAGCTATCGTACGTGAAGGCTTGAAAAACGTAACTGCAGGTGCC
       :::::::: ::::: :: ::::::::::::::::::::::::::::::::::::::::::
b323   GCTACTGTGTTGACTCAGGCTATCGTACGTGAAGGCTTGAAAAACGTAACTGCAGGTGCC
               10        20        30        40        50        60

               70        80        90       100       110       120
b14421 AACCCAATCGGAATTCGTCGCGGGATTGAAGCCGCGGTTGCGACTGCGGTTGAAGCCTTG
       :::::::: :: :: :::::::::::::::::::::::::::::::::::::::::::::
b323   AACCCAATTGGTATCCGTCGCGGGATTGAAGCCGCGGTTGCGACTGCGGTTGAAGCCTTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b14421 AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCCGTGTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::: :: :::
b323   AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCGGTATCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b14421 TCACGTTCTGAAAAAGTTGGTGAGTACATTTCAGAAGCTATGGAGCGCGTGGGAACAGAC
       :: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b323   TCCCGTTCTGAAAAAGTTGGTGAGTACATTTCAGAAGCTATGGAGCGCGTGGGAACAGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b14421 GGCGTTATTACTATCGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b323   GGCGTTATTACTATCGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b14421 ATGCAATTCGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAAAAGATGGTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b323   ATGCAATTCGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAAAAGATGGTA
              310       320       330       340       350       360

              370       380       390       400       410       420
b14421 GCTGAACTTGAAAATCCATTTATCTTGATTACAGATAAGAAGATTTCTCATATCCAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b323   GCTGAACTTGAAAATCCATTTATCTTGATTACAGATAAGAAGATTTCTCATATCCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b14421 ATTTTGCCACTCTTGGAAAGCATTCTTCAGGCCAACCGTCCGCTTTTGATTATTGCTGAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b323   ATTTTGCCACTCTTGGAAAGCATTCTTCAGGCCAACCGTCCGCTTTTGATTATTGCTGAC
              430       440       450       460       470       480

              490       500       510       520       530       540
b14421 GATGTGGATGGCGAAGCTCTTCCTACACTTGTTCTCAACAAGATTCGTGGTACATTCAAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b323   GATGTGGATGGCGAAGCTCTTCCTACACTTGTTCTCAACAAGATTCGTGGTACATTCAAC
              490       500       510       520       530       540

              550  
b14421 GTTGTTGCAGTC
       ::::::::::::
b323   GTTGTTGCAGTC
              550  

</pre>
<hr>
<A name=b28243>
<pre>
>><a onClick="window.open('getRecord.php?id=b28243',
                                'cpndb_record'); return false;" href="getRecord.php?id=b28243" target=_"blank">b28243</a> NC_022665 Streptococcus  suis  T15               (552 nt)
 initn: 2670 init1: 2670 opt: 2670  Z-score: 99.1  bits: 28.1 E():   20
banded Smith-Waterman score: 2670; 98.2% identity (98.2% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b14421 GCTACTGTCTTGACCCAAGCTATCGTACGTGAAGGCTTGAAAAACGTAACTGCAGGTGCC
       :::::::: ::::: :: ::::::::::::::::::::::::::::::::::::::::::
b28243 GCTACTGTGTTGACTCAGGCTATCGTACGTGAAGGCTTGAAAAACGTAACTGCAGGTGCC
               10        20        30        40        50        60

               70        80        90       100       110       120
b14421 AACCCAATCGGAATTCGTCGCGGGATTGAAGCCGCGGTTGCGACTGCGGTTGAAGCCTTG
       :::::::: :: :: :::::::::::::::::::::::::::::::::::::::::::::
b28243 AACCCAATTGGTATCCGTCGCGGGATTGAAGCCGCGGTTGCGACTGCGGTTGAAGCCTTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b14421 AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCCGTGTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::: :: :::
b28243 AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCGGTATCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b14421 TCACGTTCTGAAAAAGTTGGTGAGTACATTTCAGAAGCTATGGAGCGCGTGGGAACAGAC
       :: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28243 TCCCGTTCTGAAAAAGTTGGTGAGTACATTTCAGAAGCTATGGAGCGCGTGGGAACAGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b14421 GGCGTTATTACTATCGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28243 GGCGTTATTACTATCGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b14421 ATGCAATTCGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAAAAGATGGTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28243 ATGCAATTCGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAAAAGATGGTA
              310       320       330       340       350       360

              370       380       390       400       410       420
b14421 GCTGAACTTGAAAATCCATTTATCTTGATTACAGATAAGAAGATTTCTCATATCCAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28243 GCTGAACTTGAAAATCCATTTATCTTGATTACAGATAAGAAGATTTCTCATATCCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b14421 ATTTTGCCACTCTTGGAAAGCATTCTTCAGGCCAACCGTCCGCTTTTGATTATTGCTGAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
b28243 ATTTTGCCACTCTTGGAAAGCATTCTTCAGGCCAACCGTCCGCTTTTGATTATGGCTGAC
              430       440       450       460       470       480

              490       500       510       520       530       540
b14421 GATGTGGATGGCGAAGCTCTTCCTACACTTGTTCTCAACAAGATTCGTGGTACATTCAAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b28243 GATGTGGATGGCGAAGCTCTTCCTACACTTGTTCTCAACAAGATTCGTGGTACATTCAAC
              490       500       510       520       530       540

              550  
b14421 GTTGTTGCAGTC
       ::::::::::::
b28243 GTTGTTGCAGTC
              550  

</pre>
<hr>
<A name=b328>
<pre>
>><a onClick="window.open('getRecord.php?id=b328',
                                'cpndb_record'); return false;" href="getRecord.php?id=b328" target=_"blank">b328</a> AF237435 Streptococcus suis sero13 10581           (552 nt)
 initn: 2571 init1: 2571 opt: 2625  Z-score: 97.9  bits: 27.9 E():   23
banded Smith-Waterman score: 2625; 97.3% identity (97.3% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b14421 GCTACTGTCTTGACCCAAGCTATCGTACGTGAAGGCTTGAAAAACGTAACTGCAGGTGCC
       :: ::::: ::::: :: ::::::::::::::::::::::::::::::::::::::::::
b328   GCCACTGTGTTGACTCAGGCTATCGTACGTGAAGGCTTGAAAAACGTAACTGCAGGTGCC
               10        20        30        40        50        60

               70        80        90       100       110       120
b14421 AACCCAATCGGAATTCGTCGCGGGATTGAAGCCGCGGTTGCGACTGCGGTTGAAGCCTTG
       ::::::::::: :: :::::::::::::::::::::::::::::::::::::::::::::
b328   AACCCAATCGGTATCCGTCGCGGGATTGAAGCCGCGGTTGCGACTGCGGTTGAAGCCTTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b14421 AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCCGTGTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
b328   AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCGGTGTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b14421 TCACGTTCTGAAAAAGTTGGTGAGTACATTTCAGAAGCTATGGAGCGCGTGGGAACAGAC
       :: ::::::::::::::::::::::::::::: :: ::::::::::::::::::::::::
b328   TCGCGTTCTGAAAAAGTTGGTGAGTACATTTCTGAGGCTATGGAGCGCGTGGGAACAGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b14421 GGCGTTATTACTATCGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
       :::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::
b328   GGCGTTATCACTATCGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b14421 ATGCAATTCGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAAAAGATGGTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b328   ATGCAATTCGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAAAAGATGGTA
              310       320       330       340       350       360

              370       380       390       400       410       420
b14421 GCTGAACTTGAAAATCCATTTATCTTGATTACAGATAAGAAGATTTCTCATATCCAAGAT
       ::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::: 
b328   GCTGAACTTGAAAATCCATTTATCTTGATTACAGATAAGAAAATTTCTCATATCCAAGAC
              370       380       390       400       410       420

              430       440       450       460       470       480
b14421 ATTTTGCCACTCTTGGAAAGCATTCTTCAGGCCAACCGTCCGCTTTTGATTATTGCTGAC
       :::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::
b328   ATTTTGCCACTCTTGGAAAGCATTCTTCAGACCAACCGTCCGCTTTTGATTATTGCTGAC
              430       440       450       460       470       480

              490       500       510       520       530       540
b14421 GATGTGGATGGCGAAGCTCTTCCTACACTTGTTCTCAACAAGATTCGTGGTACATTCAAC
       :::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::
b328   GATGTGGATGGCGAAGCTCTTCCTACCCTTGTTCTCAACAAGATTCGTGGTACATTCAAC
              490       500       510       520       530       540

              550  
b14421 GTTGTTGCAGTC
       ::::::::::::
b328   GTTGTTGCAGTC
              550  

</pre>
<hr>
<A name=b325>
<pre>
>><a onClick="window.open('getRecord.php?id=b325',
                                'cpndb_record'); return false;" href="getRecord.php?id=b325" target=_"blank">b325</a> AF237432 Streptococcus suis sero10 4417            (552 nt)
 initn: 2551 init1: 2551 opt: 2575  Z-score: 96.6  bits: 27.7 E():   27
banded Smith-Waterman score: 2575; 96.4% identity (96.4% similar) in 551 nt overlap (1-551:1-551)
<p>

               10        20        30        40        50        60
b14421 GCTACTGTCTTGACCCAAGCTATCGTACGTGAAGGCTTGAAAAACGTAACTGCAGGTGCC
       :: :: :: :::::::: :::::::::::::::::::::::::::::::: :::::::::
b325   GCAACGGTTTTGACCCAGGCTATCGTACGTGAAGGCTTGAAAAACGTAACGGCAGGTGCC
               10        20        30        40        50        60

               70        80        90       100       110       120
b14421 AACCCAATCGGAATTCGTCGCGGGATTGAAGCCGCGGTTGCGACTGCGGTTGAAGCCTTG
       :::::::::::::::::::::::::::::::: ::::::::::: :: :::::::: :::
b325   AACCCAATCGGAATTCGTCGCGGGATTGAAGCTGCGGTTGCGACGGCAGTTGAAGCATTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b14421 AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCCGTGTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b325   AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCCGTGTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b14421 TCACGTTCTGAAAAAGTTGGTGAGTACATTTCAGAAGCTATGGAGCGCGTGGGAACAGAC
       :::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::
b325   TCACGTTCTGAAAAAGTTGGTGAGTACATTTCAGAAGCCATGGAGCGCGTGGGAACAGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b14421 GGCGTTATTACTATCGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
       :::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::
b325   GGCGTTATTACTATTGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b14421 ATGCAATTCGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAAAAGATGGTA
       :::::::::::::::::::::::::::::::::::::::::::::::::: :::::::: 
b325   ATGCAATTCGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAGAAGATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b14421 GCTGAACTTGAAAATCCATTTATCTTGATTACAGATAAGAAGATTTCTCATATCCAAGAT
       :: :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::
b325   GCGGAGCTTGAAAATCCATTTATCTTGATTACAGATAAGAAGATTTCTCATATCCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b14421 ATTTTGCCACTCTTGGAAAGCATTCTTCAGGCCAACCGTCCGCTTTTGATTATTGCTGAC
       :::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::
b325   ATTTTGCCACTCTTGGAAAGCATTCTTCAGACCAACCGTCCGCTTTTGATTATTGCTGAC
              430       440       450       460       470       480

              490       500       510       520       530       540
b14421 GATGTGGATGGCGAAGCTCTTCCTACACTTGTTCTCAACAAGATTCGTGGTACATTCAAC
       :::::::::::::: ::::::::::: :::::::::::::::::::::::::: ::::::
b325   GATGTGGATGGCGAGGCTCTTCCTACCCTTGTTCTCAACAAGATTCGTGGTACGTTCAAC
              490       500       510       520       530       540

              550  
b14421 GTTGTTGCAGTC
       :::::::: :: 
b325   GTTGTTGCTGTT
              550  

</pre>
<hr>
<A name=b19862>
<pre>
>><a onClick="window.open('getRecord.php?id=b19862',
                                'cpndb_record'); return false;" href="getRecord.php?id=b19862" target=_"blank">b19862</a> CP002644 Streptococcus suis D12                  (552 nt)
 initn: 2569 init1: 2569 opt: 2575  Z-score: 96.6  bits: 27.7 E():   27
banded Smith-Waterman score: 2575; 96.4% identity (96.4% similar) in 551 nt overlap (1-551:1-551)
<p>

               10        20        30        40        50        60
b14421 GCTACTGTCTTGACCCAAGCTATCGTACGTGAAGGCTTGAAAAACGTAACTGCAGGTGCC
       :::::::::::::: :: ::::: :: ::::::::::::::::::::::: :::::::::
b19862 GCTACTGTCTTGACTCAGGCTATTGTTCGTGAAGGCTTGAAAAACGTAACGGCAGGTGCC
               10        20        30        40        50        60

               70        80        90       100       110       120
b14421 AACCCAATCGGAATTCGTCGCGGGATTGAAGCCGCGGTTGCGACTGCGGTTGAAGCCTTG
       :::::::::::::::::::::::::::::::: ::::::::::: :: :::::::: :::
b19862 AACCCAATCGGAATTCGTCGCGGGATTGAAGCTGCGGTTGCGACGGCAGTTGAAGCATTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b14421 AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCCGTGTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19862 AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCCGTGTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b14421 TCACGTTCTGAAAAAGTTGGTGAGTACATTTCAGAAGCTATGGAGCGCGTGGGAACAGAC
       :::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::
b19862 TCACGTTCTGAAAAAGTTGGTGAGTACATTTCAGAAGCCATGGAGCGCGTGGGAACAGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b14421 GGCGTTATTACTATCGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
       :::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::
b19862 GGCGTTATTACTATTGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b14421 ATGCAATTCGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAAAAGATGGTA
       :::::::::::::::::::::::::::::::::::::::::::::::::: :::::::: 
b19862 ATGCAATTCGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAGAAGATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b14421 GCTGAACTTGAAAATCCATTTATCTTGATTACAGATAAGAAGATTTCTCATATCCAAGAT
       :: :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19862 GCGGAGCTTGAAAATCCATTTATCTTGATTACAGATAAGAAGATTTCTCATATCCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b14421 ATTTTGCCACTCTTGGAAAGCATTCTTCAGGCCAACCGTCCGCTTTTGATTATTGCTGAC
       :::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::
b19862 ATTTTGCCACTCTTGGAAAGCATTCTTCAGACCAACCGTCCGCTTTTGATTATTGCTGAC
              430       440       450       460       470       480

              490       500       510       520       530       540
b14421 GATGTGGATGGCGAAGCTCTTCCTACACTTGTTCTCAACAAGATTCGTGGTACATTCAAC
       :::::::::::::: ::::::::::: :::::::::::::::::::::::::: ::::::
b19862 GATGTGGATGGCGAGGCTCTTCCTACCCTTGTTCTCAACAAGATTCGTGGTACGTTCAAC
              490       500       510       520       530       540

              550  
b14421 GTTGTTGCAGTC
       :::::::: :: 
b19862 GTTGTTGCTGTT
              550  

</pre>
<hr>
<A name=b320>
<pre>
>><a onClick="window.open('getRecord.php?id=b320',
                                'cpndb_record'); return false;" href="getRecord.php?id=b320" target=_"blank">b320</a> AF237427 Streptococcus suis sero5 11538            (552 nt)
 initn: 2470 init1: 2470 opt: 2557  Z-score: 96.1  bits: 27.6 E():   29
banded Smith-Waterman score: 2557; 96.0% identity (96.0% similar) in 551 nt overlap (1-551:1-551)
<p>

               10        20        30        40        50        60
b14421 GCTACTGTCTTGACCCAAGCTATCGTACGTGAAGGCTTGAAAAACGTAACTGCAGGTGCC
       :: ::::: ::::: :: ::::: :: :::::::::::::::::::::::::::::::::
b320   GCAACTGTATTGACTCAGGCTATTGTTCGTGAAGGCTTGAAAAACGTAACTGCAGGTGCC
               10        20        30        40        50        60

               70        80        90       100       110       120
b14421 AACCCAATCGGAATTCGTCGCGGGATTGAAGCCGCGGTTGCGACTGCGGTTGAAGCCTTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b320   AACCCAATCGGAATTCGTCGCGGGATTGAAGCCGCGGTTGCGACTGCGGTTGAAGCCTTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b14421 AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCCGTGTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b320   AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCCGTGTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b14421 TCACGTTCTGAAAAAGTTGGTGAGTACATTTCAGAAGCTATGGAGCGCGTGGGAACAGAC
       :: ::::::::::::::::::::::::::::: :: ::::::::::::::::: ::::: 
b320   TCGCGTTCTGAAAAAGTTGGTGAGTACATTTCTGAGGCTATGGAGCGCGTGGGTACAGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b14421 GGCGTTATTACTATCGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
       :: ::::: :: :: :::::::::::::::::::::::::::::::::::::::::::::
b320   GGTGTTATCACCATTGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b14421 ATGCAATTCGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAAAAGATGGTA
       ::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::
b320   ATGCAATTCGACCGTGGTTATCTATCACAATACATGGTAACAGATAATGAAAAGATGGTA
              310       320       330       340       350       360

              370       380       390       400       410       420
b14421 GCTGAACTTGAAAATCCATTTATCTTGATTACAGATAAGAAGATTTCTCATATCCAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b320   GCTGAACTTGAAAATCCATTTATCTTGATTACAGATAAGAAGATTTCTCATATCCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b14421 ATTTTGCCACTCTTGGAAAGCATTCTTCAGGCCAACCGTCCGCTTTTGATTATTGCTGAC
       :::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::
b320   ATTTTGCCACTCTTGGAAAGCATTCTTCAGACCAACCGTCCGCTTTTGATTATTGCTGAC
              430       440       450       460       470       480

              490       500       510       520       530       540
b14421 GATGTGGATGGCGAAGCTCTTCCTACACTTGTTCTCAACAAGATTCGTGGTACATTCAAC
       :::::::::::::: ::::: ::::: :::::::::::::::::::::::::: ::::::
b320   GATGTGGATGGCGAGGCTCTCCCTACCCTTGTTCTCAACAAGATTCGTGGTACGTTCAAC
              490       500       510       520       530       540

              550  
b14421 GTTGTTGCAGTC
       :::::::: :: 
b320   GTTGTTGCTGTT
              550  

</pre>
<hr>
<A name=b335>
<pre>
>><a onClick="window.open('getRecord.php?id=b335',
                                'cpndb_record'); return false;" href="getRecord.php?id=b335" target=_"blank">b335</a> AF237442 Streptococcus suis sero1/2 2651           (552 nt)
 initn: 2524 init1: 2524 opt: 2557  Z-score: 96.1  bits: 27.6 E():   29
banded Smith-Waterman score: 2557; 96.0% identity (96.0% similar) in 551 nt overlap (1-551:1-551)
<p>

               10        20        30        40        50        60
b14421 GCTACTGTCTTGACCCAAGCTATCGTACGTGAAGGCTTGAAAAACGTAACTGCAGGTGCC
       :: ::::: :::::::::::::::::::: ::::::::::::::::::::::::::::::
b335   GCAACTGTTTTGACCCAAGCTATCGTACGCGAAGGCTTGAAAAACGTAACTGCAGGTGCC
               10        20        30        40        50        60

               70        80        90       100       110       120
b14421 AACCCAATCGGAATTCGTCGCGGGATTGAAGCCGCGGTTGCGACTGCGGTTGAAGCCTTG
       :::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::
b335   AACCCAATCGGAATTCGTCGCGGGATTGAAGCTGCGGTTGCGACTGCGGTTGAAGCCTTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b14421 AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCCGTGTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::: :: :::
b335   AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCGGTATCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b14421 TCACGTTCTGAAAAAGTTGGTGAGTACATTTCAGAAGCTATGGAGCGCGTGGGAACAGAC
       :: ::::::::::::::::::::::::::::: :: ::::::::::::::::::::::::
b335   TCCCGTTCTGAAAAAGTTGGTGAGTACATTTCTGAGGCTATGGAGCGCGTGGGAACAGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b14421 GGCGTTATTACTATCGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b335   GGCGTTATTACTATCGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b14421 ATGCAATTCGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAAAAGATGGTA
       :::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::
b335   ATGCGATTCGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAAAAGATGGTA
              310       320       330       340       350       360

              370       380       390       400       410       420
b14421 GCTGAACTTGAAAATCCATTTATCTTGATTACAGATAAGAAGATTTCTCATATCCAAGAT
       :::::::::::::::::::: :::::: :::: :::::::: ::::::::::::::::: 
b335   GCTGAACTTGAAAATCCATTCATCTTGCTTACCGATAAGAAAATTTCTCATATCCAAGAC
              370       380       390       400       410       420

              430       440       450       460       470       480
b14421 ATTTTGCCACTCTTGGAAAGCATTCTTCAGGCCAACCGTCCGCTTTTGATTATTGCTGAC
       :::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::
b335   ATTTTGCCACTCTTGGAAAGCATTCTTCAGACCAACCGTCCGCTTTTGATTATTGCTGAC
              430       440       450       460       470       480

              490       500       510       520       530       540
b14421 GATGTGGATGGCGAAGCTCTTCCTACACTTGTTCTCAACAAGATTCGTGGTACATTCAAC
       ::::::::::: ::::: :::::::: ::::::::: :::::::::::::::: ::::::
b335   GATGTGGATGGTGAAGCACTTCCTACCCTTGTTCTCCACAAGATTCGTGGTACGTTCAAC
              490       500       510       520       530       540

              550  
b14421 GTTGTTGCAGTC
       :::::::: :: 
b335   GTTGTTGCTGTT
              550  

</pre>
<hr>
<A name=b319>
<pre>
>><a onClick="window.open('getRecord.php?id=b319',
                                'cpndb_record'); return false;" href="getRecord.php?id=b319" target=_"blank">b319</a> AF237426 Streptococcus suis sero4 6407             (552 nt)
 initn: 2461 init1: 2461 opt: 2548  Z-score: 95.9  bits: 27.5 E():   29
banded Smith-Waterman score: 2548; 95.8% identity (95.8% similar) in 551 nt overlap (1-551:1-551)
<p>

               10        20        30        40        50        60
b14421 GCTACTGTCTTGACCCAAGCTATCGTACGTGAAGGCTTGAAAAACGTAACTGCAGGTGCC
       :: ::::: ::::: :: ::::: :: :::::::::::::::::::::::::::::::::
b319   GCAACTGTATTGACTCAGGCTATTGTTCGTGAAGGCTTGAAAAACGTAACTGCAGGTGCC
               10        20        30        40        50        60

               70        80        90       100       110       120
b14421 AACCCAATCGGAATTCGTCGCGGGATTGAAGCCGCGGTTGCGACTGCGGTTGAAGCCTTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b319   AACCCAATCGGAATTCGTCGCGGGATTGAAGCCGCGGTTGCGACTGCGGTTGAAGCCTTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b14421 AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCCGTGTCT
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :
b319   AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCCGTGTGT
              130       140       150       160       170       180

              190       200       210       220       230       240
b14421 TCACGTTCTGAAAAAGTTGGTGAGTACATTTCAGAAGCTATGGAGCGCGTGGGAACAGAC
       :: ::::::::::::::::::::::::::::: :: ::::::::::::::::: ::::: 
b319   TCGCGTTCTGAAAAAGTTGGTGAGTACATTTCTGAGGCTATGGAGCGCGTGGGTACAGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b14421 GGCGTTATTACTATCGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
       :: ::::: :: :: :::::::::::::::::::::::::::::::::::::::::::::
b319   GGTGTTATCACCATTGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b14421 ATGCAATTCGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAAAAGATGGTA
       ::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::
b319   ATGCAATTCGACCGTGGTTATCTATCACAATACATGGTAACAGATAATGAAAAGATGGTA
              310       320       330       340       350       360

              370       380       390       400       410       420
b14421 GCTGAACTTGAAAATCCATTTATCTTGATTACAGATAAGAAGATTTCTCATATCCAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b319   GCTGAACTTGAAAATCCATTTATCTTGATTACAGATAAGAAGATTTCTCATATCCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b14421 ATTTTGCCACTCTTGGAAAGCATTCTTCAGGCCAACCGTCCGCTTTTGATTATTGCTGAC
       :::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::
b319   ATTTTGCCACTCTTGGAAAGCATTCTTCAGACCAACCGTCCGCTTTTGATTATTGCTGAC
              430       440       450       460       470       480

              490       500       510       520       530       540
b14421 GATGTGGATGGCGAAGCTCTTCCTACACTTGTTCTCAACAAGATTCGTGGTACATTCAAC
       :::::::::::::: ::::: ::::: :::::::::::::::::::::::::: ::::::
b319   GATGTGGATGGCGAGGCTCTCCCTACCCTTGTTCTCAACAAGATTCGTGGTACGTTCAAC
              490       500       510       520       530       540

              550  
b14421 GTTGTTGCAGTC
       :::::::: :: 
b319   GTTGTTGCTGTT
              550  

</pre>
<hr>
<A name=b340>
<pre>
>><a onClick="window.open('getRecord.php?id=b340',
                                'cpndb_record'); return false;" href="getRecord.php?id=b340" target=_"blank">b340</a> AF237447 Streptococcus suis sero24 88-5299A        (552 nt)
 initn: 2535 init1: 2535 opt: 2535  Z-score: 95.6  bits: 27.5 E():   31
banded Smith-Waterman score: 2535; 95.5% identity (95.5% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b14421 GCTACTGTCTTGACCCAAGCTATCGTACGTGAAGGCTTGAAAAACGTAACTGCAGGTGCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b340   GCTACTGTCTTGACCCAAGCTATCGTACGTGAAGGCTTGAAAAACGTAACTGCAGGTGCC
               10        20        30        40        50        60

               70        80        90       100       110       120
b14421 AACCCAATCGGAATTCGTCGCGGGATTGAAGCCGCGGTTGCGACTGCGGTTGAAGCCTTG
       :::::::: :: :: ::::: :: :: ::::: ::::::::::: :::::::::::::::
b340   AACCCAATTGGTATCCGTCGTGGTATCGAAGCTGCGGTTGCGACGGCGGTTGAAGCCTTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b14421 AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCCGTGTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b340   AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCCGTGTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b14421 TCACGTTCTGAAAAAGTTGGTGAGTACATTTCAGAAGCTATGGAGCGCGTGGGAACAGAC
       :::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::
b340   TCACGTTCTGAAAAAGTTGGTGAGTACATTTCAGAAGCCATGGAGCGCGTGGGAACAGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b14421 GGCGTTATTACTATCGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
       :: ::::: :: :: :::::::::::::::::::::::::::::::::::::::::::::
b340   GGTGTTATCACCATTGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b14421 ATGCAATTCGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAAAAGATGGTA
       :::::::::::::::::::::::::::::::: :::::::::::::::::::::::::: 
b340   ATGCAATTCGACCGTGGTTATCTGTCACAATATATGGTAACAGATAATGAAAAGATGGTG
              310       320       330       340       350       360

              370       380       390       400       410       420
b14421 GCTGAACTTGAAAATCCATTTATCTTGATTACAGATAAGAAGATTTCTCATATCCAAGAT
       :: ::::::::::::::::: :::::::::::::::::::: ::::::::::::::::::
b340   GCAGAACTTGAAAATCCATTCATCTTGATTACAGATAAGAAAATTTCTCATATCCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b14421 ATTTTGCCACTCTTGGAAAGCATTCTTCAGGCCAACCGTCCGCTTTTGATTATTGCTGAC
       :::::::::::::::::::::::::::::: :::  ::::: :: :::::::::::::::
b340   ATTTTGCCACTCTTGGAAAGCATTCTTCAGACCAGTCGTCCTCTCTTGATTATTGCTGAC
              430       440       450       460       470       480

              490       500       510       520       530       540
b14421 GATGTGGATGGCGAAGCTCTTCCTACACTTGTTCTCAACAAGATTCGTGGTACATTCAAC
       :::::::::::::::::::::::::: :::::::::::::::::::::::::: ::::::
b340   GATGTGGATGGCGAAGCTCTTCCTACTCTTGTTCTCAACAAGATTCGTGGTACCTTCAAC
              490       500       510       520       530       540

              550  
b14421 GTTGTTGCAGTC
       ::::::::::::
b340   GTTGTTGCAGTC
              550  

</pre>
<hr>
<A name=b326>
<pre>
>><a onClick="window.open('getRecord.php?id=b326',
                                'cpndb_record'); return false;" href="getRecord.php?id=b326" target=_"blank">b326</a> AF237433 Streptococcus suis sero11 12814           (552 nt)
 initn: 2461 init1: 2461 opt: 2494  Z-score: 94.5  bits: 27.3 E():   35
banded Smith-Waterman score: 2494; 94.7% identity (94.7% similar) in 551 nt overlap (1-551:1-551)
<p>

               10        20        30        40        50        60
b14421 GCTACTGTCTTGACCCAAGCTATCGTACGTGAAGGCTTGAAAAACGTAACTGCAGGTGCC
       :: ::::: :::::::: ::::::::::::::::::::::::::::::::::::::::::
b326   GCAACTGTATTGACCCAGGCTATCGTACGTGAAGGCTTGAAAAACGTAACTGCAGGTGCC
               10        20        30        40        50        60

               70        80        90       100       110       120
b14421 AACCCAATCGGAATTCGTCGCGGGATTGAAGCCGCGGTTGCGACTGCGGTTGAAGCCTTG
       :::::::: :: :: ::::::::::::::::: ::::::::::: :: ::::::::::::
b326   AACCCAATTGGTATCCGTCGCGGGATTGAAGCAGCGGTTGCGACGGCAGTTGAAGCCTTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b14421 AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCCGTGTCT
       :::::::::::::: :: ::::::::::::::::::::::: ::::::::::: :: :::
b326   AAAGCACAAGCAAGCCCAGTATCCAATAAAGCTGAAATTGCCCAGGTAGCAGCGGTATCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b14421 TCACGTTCTGAAAAAGTTGGTGAGTACATTTCAGAAGCTATGGAGCGCGTGGGAACAGAC
       :: ::::::::::::::::::::::::::::::::::: :::::::::::::::::::::
b326   TCCCGTTCTGAAAAAGTTGGTGAGTACATTTCAGAAGCCATGGAGCGCGTGGGAACAGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b14421 GGCGTTATTACTATCGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
       :::::::::::::::::::::::::::::::::::::: ::  :::::::::::::::::
b326   GGCGTTATTACTATCGAAGAATCTCGCGGTATGGAAACTGAGCTGGATGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b14421 ATGCAATTCGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAAAAGATGGTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: 
b326   ATGCAATTCGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAAAAGATGGTG
              310       320       330       340       350       360

              370       380       390       400       410       420
b14421 GCTGAACTTGAAAATCCATTTATCTTGATTACAGATAAGAAGATTTCTCATATCCAAGAT
       :::::::::::::::::::: ::::::::::: :::::::::::::::::::::::::::
b326   GCTGAACTTGAAAATCCATTCATCTTGATTACCGATAAGAAGATTTCTCATATCCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b14421 ATTTTGCCACTCTTGGAAAGCATTCTTCAGGCCAACCGTCCGCTTTTGATTATTGCTGAC
       ::::::::::::::::::::::: :::::: :::::::::::::::::::::::::::::
b326   ATTTTGCCACTCTTGGAAAGCATCCTTCAGACCAACCGTCCGCTTTTGATTATTGCTGAC
              430       440       450       460       470       480

              490       500       510       520       530       540
b14421 GATGTGGATGGCGAAGCTCTTCCTACACTTGTTCTCAACAAGATTCGTGGTACATTCAAC
       ::::::::::: ::::: :::::::: :::::::::::::::::::::::::: ::::::
b326   GATGTGGATGGTGAAGCACTTCCTACCCTTGTTCTCAACAAGATTCGTGGTACGTTCAAC
              490       500       510       520       530       540

              550  
b14421 GTTGTTGCAGTC
       :::::::: :: 
b326   GTTGTTGCTGTT
              550  

</pre>
<hr>
<A name=b332>
<pre>
>><a onClick="window.open('getRecord.php?id=b332',
                                'cpndb_record'); return false;" href="getRecord.php?id=b332" target=_"blank">b332</a> AF237439 Streptococcus suis sero17 93A             (552 nt)
 initn: 2481 init1: 2481 opt: 2481  Z-score: 94.1  bits: 27.2 E():   37
banded Smith-Waterman score: 2481; 94.4% identity (94.4% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b14421 GCTACTGTCTTGACCCAAGCTATCGTACGTGAAGGCTTGAAAAACGTAACTGCAGGTGCC
       :::::::: ::::: ::::: :: :: :: ::::::::::::::::: ::::::::::::
b332   GCTACTGTTTTGACACAAGCGATTGTTCGCGAAGGCTTGAAAAACGTGACTGCAGGTGCC
               10        20        30        40        50        60

               70        80        90       100       110       120
b14421 AACCCAATCGGAATTCGTCGCGGGATTGAAGCCGCGGTTGCGACTGCGGTTGAAGCCTTG
       ::::::::::: :: ::::: :: :::::::::::::::::::: :::::::::::::::
b332   AACCCAATCGGTATCCGTCGTGGTATTGAAGCCGCGGTTGCGACGGCGGTTGAAGCCTTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b14421 AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCCGTGTCT
       :::::::::::::::::::::::::::::::::::::::::::: :: ::::: ::::::
b332   AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAAGTCGCAGCTGTGTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b14421 TCACGTTCTGAAAAAGTTGGTGAGTACATTTCAGAAGCTATGGAGCGCGTGGGAACAGAC
       :: :: :::::::::::::::::::::::::: :: ::::::::::::::::::::::::
b332   TCGCGCTCTGAAAAAGTTGGTGAGTACATTTCTGAGGCTATGGAGCGCGTGGGAACAGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b14421 GGCGTTATTACTATCGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
       :: ::::: ::::: ::::::::::::::::::::::: :: ::::::::::::::::::
b332   GGTGTTATCACTATTGAAGAATCTCGCGGTATGGAAACTGAGTTGGATGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b14421 ATGCAATTCGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAAAAGATGGTA
       :::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::
b332   ATGCAATTTGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAAAAGATGGTA
              310       320       330       340       350       360

              370       380       390       400       410       420
b14421 GCTGAACTTGAAAATCCATTTATCTTGATTACAGATAAGAAGATTTCTCATATCCAAGAT
       :::::::::::::::::::: ::::::::::: :::::::: ::::::::::::::::: 
b332   GCTGAACTTGAAAATCCATTCATCTTGATTACCGATAAGAAAATTTCTCATATCCAAGAC
              370       380       390       400       410       420

              430       440       450       460       470       480
b14421 ATTTTGCCACTCTTGGAAAGCATTCTTCAGGCCAACCGTCCGCTTTTGATTATTGCTGAC
       :::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::
b332   ATTTTGCCACTCTTGGAAAGCATTCTTCAGACCAACCGTCCGCTTTTGATTATTGCTGAC
              430       440       450       460       470       480

              490       500       510       520       530       540
b14421 GATGTGGATGGCGAAGCTCTTCCTACACTTGTTCTCAACAAGATTCGTGGTACATTCAAC
       :::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::
b332   GATGTGGATGGCGAAGCTCTTCCTACCCTTGTTCTCAACAAGATTCGTGGTACATTCAAC
              490       500       510       520       530       540

              550  
b14421 GTTGTTGCAGTC
       ::::::::::::
b332   GTTGTTGCAGTC
              550  

</pre>
<hr>
<A name=b334>
<pre>
>><a onClick="window.open('getRecord.php?id=b334',
                                'cpndb_record'); return false;" href="getRecord.php?id=b334" target=_"blank">b334</a> AF237441 Streptococcus suis sero19 42A             (552 nt)
 initn: 2481 init1: 2481 opt: 2481  Z-score: 94.1  bits: 27.2 E():   37
banded Smith-Waterman score: 2481; 94.4% identity (94.4% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b14421 GCTACTGTCTTGACCCAAGCTATCGTACGTGAAGGCTTGAAAAACGTAACTGCAGGTGCC
       :::::::: ::::: ::::: :: :: :: ::::::::::::::::: ::::::::::::
b334   GCTACTGTTTTGACACAAGCGATTGTTCGCGAAGGCTTGAAAAACGTGACTGCAGGTGCC
               10        20        30        40        50        60

               70        80        90       100       110       120
b14421 AACCCAATCGGAATTCGTCGCGGGATTGAAGCCGCGGTTGCGACTGCGGTTGAAGCCTTG
       ::::::::::: :: ::::: :: :::::::::::::::::::: :::::::::::::::
b334   AACCCAATCGGTATCCGTCGTGGTATTGAAGCCGCGGTTGCGACGGCGGTTGAAGCCTTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b14421 AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAGGTAGCAGCCGTGTCT
       :::::::::::::::::::::::::::::::::::::::::::: :: ::::: ::::::
b334   AAAGCACAAGCAAGTCCTGTATCCAATAAAGCTGAAATTGCTCAAGTCGCAGCTGTGTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b14421 TCACGTTCTGAAAAAGTTGGTGAGTACATTTCAGAAGCTATGGAGCGCGTGGGAACAGAC
       :: :: :::::::::::::::::::::::::: :: ::::::::::::::::::::::::
b334   TCGCGCTCTGAAAAAGTTGGTGAGTACATTTCTGAGGCTATGGAGCGCGTGGGAACAGAC
              190       200       210       220       230       240

              250       260       270       280       290       300
b14421 GGCGTTATTACTATCGAAGAATCTCGCGGTATGGAAACAGAATTGGATGTGGTTGAAGGT
       :: ::::: ::::: ::::::::::::::::::::::: :: ::::::::::::::::::
b334   GGTGTTATCACTATTGAAGAATCTCGCGGTATGGAAACTGAGTTGGATGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b14421 ATGCAATTCGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAAAAGATGGTA
       :::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::
b334   ATGCAATTTGACCGTGGTTATCTGTCACAATACATGGTAACAGATAATGAAAAGATGGTA
              310       320       330       340       350       360

              370       380       390       400       410       420
b14421 GCTGAACTTGAAAATCCATTTATCTTGATTACAGATAAGAAGATTTCTCATATCCAAGAT
       :::::::::::::::::::: ::::::::::: :::::::: ::::::::::::::::: 
b334   GCTGAACTTGAAAATCCATTCATCTTGATTACCGATAAGAAAATTTCTCATATCCAAGAC
              370       380       390       400       410       420

              430       440       450       460       470       480
b14421 ATTTTGCCACTCTTGGAAAGCATTCTTCAGGCCAACCGTCCGCTTTTGATTATTGCTGAC
       :::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::
b334   ATTTTGCCACTCTTGGAAAGCATTCTTCAGACCAACCGTCCGCTTTTGATTATTGCTGAC
              430       440       450       460       470       480

              490       500       510       520       530       540
b14421 GATGTGGATGGCGAAGCTCTTCCTACACTTGTTCTCAACAAGATTCGTGGTACATTCAAC
       :::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::
b334   GATGTGGATGGCGAAGCTCTTCCTACCCTTGTTCTCAACAAGATTCGTGGTACATTCAAC
              490       500       510       520       530       540

              550  
b14421 GTTGTTGCAGTC
       ::::::::::::
b334   GTTGTTGCAGTC
              550  

</pre>
<hr>
<p><pre>


552 residues in 1 query   sequences
10433008 residues in 18820 library sequences
 Scomplib [35.03]
 start: Mon Jul 22 03:10:14 2024 done: Mon Jul 22 03:10:16 2024
 Total Scan time:  2.230 Total Display time:  0.010

Function used was FASTA [version 35.03 Feb. 18, 2008]
</pre>