/var/www/html/cpndb/fasta_results/b13501.fasta# /data/www/cpndb/fasta35 -E 200 -Q -m 6 -b 20 -d 20 -z 2 -H /data/www/cpndb/fasta_results/b13501 /data/www/cpndb/blastDBs/reference_a_nut
<pre>
FASTA searches a protein or DNA sequence data bank
 version 35.03 Feb. 18, 2008
Please cite:
 W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

</pre>
Query: /data/www/cpndb/fasta_results/b13501
<pre>
  1>>>b13501 555 nt - 555 nt
Library: /data/www/cpndb/blastDBs/reference_a_nut 10433008 residues in 18820 sequences

10433008 residues in 18820 sequences
Statistics: MLE_cen statistics: Lambda= 0.0031;  K=4.385e-05 (cen=941)
Algorithm: FASTA (3.5 Sept 2006) [optimized]
Parameters: +5/-4 matrix (5:-4) ktup: 6
 join: 51, opt: 36, open/ext: -12/-4, width:  16
 Scan time:  2.170
</pre>
<p>
<hr>
<p>
<p><pre>

The best scores are:                                      opt bits E(18820)
<a onClick="window.open('getRecord.php?id=b23453',
                                'cpndb_record'); return false;" href="getRecord.php?id=b23453" target=_"blank">b23453</a> AOGG01000010 Salmonella enterica subsp. ( 555) [f] 2766 26.8      51 <A HREF="#b23453">align</A>
<a onClick="window.open('getRecord.php?id=b18497',
                                'cpndb_record'); return false;" href="getRecord.php?id=b18497" target=_"blank">b18497</a> FR775246 Salmonella enterica subsp. ent ( 555) [f] 2766 26.8      51 <A HREF="#b18497">align</A>
<a onClick="window.open('getRecord.php?id=b23683',
                                'cpndb_record'); return false;" href="getRecord.php?id=b23683" target=_"blank">b23683</a> NZ_ALPN01000009 Salmonella enterica sub ( 555) [f] 2766 26.8      51 <A HREF="#b23683">align</A>
<a onClick="window.open('getRecord.php?id=b1255',
                                'cpndb_record'); return false;" href="getRecord.php?id=b1255" target=_"blank">b1255</a> AY044105 Salmonella typhimurium          ( 555) [f] 2757 26.7      53 <A HREF="#b1255">align</A>
<a onClick="window.open('getRecord.php?id=b21807',
                                'cpndb_record'); return false;" href="getRecord.php?id=b21807" target=_"blank">b21807</a> AMEG01000241 Salmonella enterica subsp. ( 555) [f] 2757 26.7      53 <A HREF="#b21807">align</A>
<a onClick="window.open('getRecord.php?id=b21828',
                                'cpndb_record'); return false;" href="getRecord.php?id=b21828" target=_"blank">b21828</a> NZ_AMDY01000212 Salmonella enterica sub ( 555) [f] 2757 26.7      53 <A HREF="#b21828">align</A>
<a onClick="window.open('getRecord.php?id=b422',
                                'cpndb_record'); return false;" href="getRecord.php?id=b422" target=_"blank">b422</a> AB033231.1 Salmonella typhimurium x3306   ( 555) [f] 2757 26.7      53 <A HREF="#b422">align</A>
<a onClick="window.open('getRecord.php?id=b20512',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20512" target=_"blank">b20512</a> NC_016860 Salmonella enterica subsp. en ( 555) [f] 2757 26.7      53 <A HREF="#b20512">align</A>
<a onClick="window.open('getRecord.php?id=b19049',
                                'cpndb_record'); return false;" href="getRecord.php?id=b19049" target=_"blank">b19049</a> CP002614 Salmonella enterica subsp. ent ( 555) [f] 2757 26.7      53 <A HREF="#b19049">align</A>
<a onClick="window.open('getRecord.php?id=b21829',
                                'cpndb_record'); return false;" href="getRecord.php?id=b21829" target=_"blank">b21829</a> NZ_AMDX01000200 Salmonella enterica sub ( 555) [f] 2757 26.7      53 <A HREF="#b21829">align</A>
<a onClick="window.open('getRecord.php?id=b21810',
                                'cpndb_record'); return false;" href="getRecord.php?id=b21810" target=_"blank">b21810</a> AMED01000225 Salmonella enterica subsp. ( 555) [f] 2757 26.7      53 <A HREF="#b21810">align</A>
<a onClick="window.open('getRecord.php?id=b21924',
                                'cpndb_record'); return false;" href="getRecord.php?id=b21924" target=_"blank">b21924</a> NZ_AMDZ01000198 Salmonella enterica sub ( 555) [f] 2757 26.7      53 <A HREF="#b21924">align</A>
<a onClick="window.open('getRecord.php?id=b1337',
                                'cpndb_record'); return false;" href="getRecord.php?id=b1337" target=_"blank">b1337</a> NC_003197 Salmonella typhimurium LT2, SG ( 555) [f] 2757 26.7      53 <A HREF="#b1337">align</A>
<a onClick="window.open('getRecord.php?id=b21808',
                                'cpndb_record'); return false;" href="getRecord.php?id=b21808" target=_"blank">b21808</a> AMEF01000246 Salmonella enterica subsp. ( 555) [f] 2757 26.7      53 <A HREF="#b21808">align</A>
<a onClick="window.open('getRecord.php?id=b21922',
                                'cpndb_record'); return false;" href="getRecord.php?id=b21922" target=_"blank">b21922</a> NZ_AMEB01000192 Salmonella enterica sub ( 555) [f] 2757 26.7      53 <A HREF="#b21922">align</A>
<a onClick="window.open('getRecord.php?id=b20569',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20569" target=_"blank">b20569</a> NC_016857 Salmonella enterica subsp. en ( 555) [f] 2757 26.7      53 <A HREF="#b20569">align</A>
<a onClick="window.open('getRecord.php?id=b21923',
                                'cpndb_record'); return false;" href="getRecord.php?id=b21923" target=_"blank">b21923</a> NZ_AMEA01000187 Salmonella enterica sub ( 555) [f] 2757 26.7      53 <A HREF="#b21923">align</A>
<a onClick="window.open('getRecord.php?id=b21809',
                                'cpndb_record'); return false;" href="getRecord.php?id=b21809" target=_"blank">b21809</a> AMEE01000185 Salmonella enterica subsp. ( 555) [f] 2757 26.7      53 <A HREF="#b21809">align</A>
<a onClick="window.open('getRecord.php?id=b18575',
                                'cpndb_record'); return false;" href="getRecord.php?id=b18575" target=_"blank">b18575</a> CP002487 Salmonella enterica subsp. ent ( 555) [f] 2757 26.7      53 <A HREF="#b18575">align</A>
<a onClick="window.open('getRecord.php?id=b21921',
                                'cpndb_record'); return false;" href="getRecord.php?id=b21921" target=_"blank">b21921</a> NZ_AMEC01000233 Salmonella enterica sub ( 555) [f] 2757 26.7      53 <A HREF="#b21921">align</A>
</pre><p><hr><p>

>>>b13501, 555 nt vs /data/www/cpndb/blastDBs/reference_a_nut library

<A name=b23453>
<pre>
>><a onClick="window.open('getRecord.php?id=b23453',
                                'cpndb_record'); return false;" href="getRecord.php?id=b23453" target=_"blank">b23453</a> AOGG01000010 Salmonella enterica subsp. enteric  (555 nt)
 initn: 2766 init1: 2766 opt: 2766  Z-score: 91.6  bits: 26.8 E():   51
banded Smith-Waterman score: 2766; 99.8% identity (99.8% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13501 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCCTGAAAGCCGTTGCTGCGGGCATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23453 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCCTGAAAGCCGTTGCTGCGGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13501 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23453 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13501 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23453 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13501 GCTAACTCCGACGAAACTGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
       ::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::
b23453 GCTAACTCCGACGAAACCGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b13501 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23453 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13501 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23453 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13501 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23453 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
              370       380       390       400       410       420

              430       440       450       460       470       480
b13501 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23453 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13501 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23453 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
              490       500       510       520       530       540

              550     
b13501 AAAGTGGCTGCTGTT
       :::::::::::::::
b23453 AAAGTGGCTGCTGTT
              550     

</pre>
<hr>
<A name=b18497>
<pre>
>><a onClick="window.open('getRecord.php?id=b18497',
                                'cpndb_record'); return false;" href="getRecord.php?id=b18497" target=_"blank">b18497</a> FR775246 Salmonella enterica subsp. enterica se  (555 nt)
 initn: 2766 init1: 2766 opt: 2766  Z-score: 91.6  bits: 26.8 E():   51
banded Smith-Waterman score: 2766; 99.8% identity (99.8% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13501 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCCTGAAAGCCGTTGCTGCGGGCATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18497 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCCTGAAAGCCGTTGCTGCGGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13501 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18497 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13501 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18497 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13501 GCTAACTCCGACGAAACTGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
       ::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::
b18497 GCTAACTCCGACGAAACCGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b13501 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18497 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13501 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18497 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13501 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18497 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
              370       380       390       400       410       420

              430       440       450       460       470       480
b13501 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18497 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13501 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18497 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
              490       500       510       520       530       540

              550     
b13501 AAAGTGGCTGCTGTT
       :::::::::::::::
b18497 AAAGTGGCTGCTGTT
              550     

</pre>
<hr>
<A name=b23683>
<pre>
>><a onClick="window.open('getRecord.php?id=b23683',
                                'cpndb_record'); return false;" href="getRecord.php?id=b23683" target=_"blank">b23683</a> NZ_ALPN01000009 Salmonella enterica subsp. ente  (555 nt)
 initn: 2766 init1: 2766 opt: 2766  Z-score: 91.6  bits: 26.8 E():   51
banded Smith-Waterman score: 2766; 99.8% identity (99.8% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13501 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCCTGAAAGCCGTTGCTGCGGGCATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23683 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCCTGAAAGCCGTTGCTGCGGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13501 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23683 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13501 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23683 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13501 GCTAACTCCGACGAAACTGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
       ::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::
b23683 GCTAACTCCGACGAAACCGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b13501 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23683 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13501 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23683 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13501 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23683 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
              370       380       390       400       410       420

              430       440       450       460       470       480
b13501 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23683 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13501 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23683 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
              490       500       510       520       530       540

              550     
b13501 AAAGTGGCTGCTGTT
       :::::::::::::::
b23683 AAAGTGGCTGCTGTT
              550     

</pre>
<hr>
<A name=b1255>
<pre>
>><a onClick="window.open('getRecord.php?id=b1255',
                                'cpndb_record'); return false;" href="getRecord.php?id=b1255" target=_"blank">b1255</a> AY044105 Salmonella typhimurium                   (555 nt)
 initn: 2757 init1: 2757 opt: 2757  Z-score: 91.3  bits: 26.7 E():   53
banded Smith-Waterman score: 2757; 99.6% identity (99.6% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13501 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCCTGAAAGCCGTTGCTGCGGGCATG
       :::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
b1255  GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCTTGAAAGCCGTTGCTGCGGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13501 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1255  AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13501 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1255  AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13501 GCTAACTCCGACGAAACTGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
       ::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::
b1255  GCTAACTCCGACGAAACCGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b13501 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1255  GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13501 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1255  GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13501 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1255  GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
              370       380       390       400       410       420

              430       440       450       460       470       480
b13501 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1255  GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13501 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1255  GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
              490       500       510       520       530       540

              550     
b13501 AAAGTGGCTGCTGTT
       :::::::::::::::
b1255  AAAGTGGCTGCTGTT
              550     

</pre>
<hr>
<A name=b21807>
<pre>
>><a onClick="window.open('getRecord.php?id=b21807',
                                'cpndb_record'); return false;" href="getRecord.php?id=b21807" target=_"blank">b21807</a> AMEG01000241 Salmonella enterica subsp. enteric  (555 nt)
 initn: 2757 init1: 2757 opt: 2757  Z-score: 91.3  bits: 26.7 E():   53
banded Smith-Waterman score: 2757; 99.6% identity (99.6% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13501 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCCTGAAAGCCGTTGCTGCGGGCATG
       :::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
b21807 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCTTGAAAGCCGTTGCTGCGGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13501 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21807 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13501 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21807 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13501 GCTAACTCCGACGAAACTGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
       ::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::
b21807 GCTAACTCCGACGAAACCGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b13501 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21807 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13501 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21807 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13501 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21807 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
              370       380       390       400       410       420

              430       440       450       460       470       480
b13501 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21807 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13501 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21807 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
              490       500       510       520       530       540

              550     
b13501 AAAGTGGCTGCTGTT
       :::::::::::::::
b21807 AAAGTGGCTGCTGTT
              550     

</pre>
<hr>
<A name=b21828>
<pre>
>><a onClick="window.open('getRecord.php?id=b21828',
                                'cpndb_record'); return false;" href="getRecord.php?id=b21828" target=_"blank">b21828</a> NZ_AMDY01000212 Salmonella enterica subsp. ente  (555 nt)
 initn: 2757 init1: 2757 opt: 2757  Z-score: 91.3  bits: 26.7 E():   53
banded Smith-Waterman score: 2757; 99.6% identity (99.6% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13501 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCCTGAAAGCCGTTGCTGCGGGCATG
       :::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
b21828 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCTTGAAAGCCGTTGCTGCGGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13501 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21828 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13501 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21828 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13501 GCTAACTCCGACGAAACTGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
       ::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::
b21828 GCTAACTCCGACGAAACCGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b13501 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21828 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13501 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21828 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13501 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21828 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
              370       380       390       400       410       420

              430       440       450       460       470       480
b13501 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21828 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13501 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21828 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
              490       500       510       520       530       540

              550     
b13501 AAAGTGGCTGCTGTT
       :::::::::::::::
b21828 AAAGTGGCTGCTGTT
              550     

</pre>
<hr>
<A name=b422>
<pre>
>><a onClick="window.open('getRecord.php?id=b422',
                                'cpndb_record'); return false;" href="getRecord.php?id=b422" target=_"blank">b422</a> AB033231.1 Salmonella typhimurium x3306            (555 nt)
 initn: 2757 init1: 2757 opt: 2757  Z-score: 91.3  bits: 26.7 E():   53
banded Smith-Waterman score: 2757; 99.6% identity (99.6% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13501 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCCTGAAAGCCGTTGCTGCGGGCATG
       :::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
b422   GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCTTGAAAGCCGTTGCTGCGGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13501 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b422   AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13501 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b422   AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13501 GCTAACTCCGACGAAACTGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
       ::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::
b422   GCTAACTCCGACGAAACCGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b13501 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b422   GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13501 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b422   GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13501 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b422   GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
              370       380       390       400       410       420

              430       440       450       460       470       480
b13501 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b422   GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13501 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b422   GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
              490       500       510       520       530       540

              550     
b13501 AAAGTGGCTGCTGTT
       :::::::::::::::
b422   AAAGTGGCTGCTGTT
              550     

</pre>
<hr>
<A name=b20512>
<pre>
>><a onClick="window.open('getRecord.php?id=b20512',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20512" target=_"blank">b20512</a> NC_016860 Salmonella enterica subsp. enterica s  (555 nt)
 initn: 2757 init1: 2757 opt: 2757  Z-score: 91.3  bits: 26.7 E():   53
banded Smith-Waterman score: 2757; 99.6% identity (99.6% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13501 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCCTGAAAGCCGTTGCTGCGGGCATG
       :::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
b20512 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCTTGAAAGCCGTTGCTGCGGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13501 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20512 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13501 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20512 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13501 GCTAACTCCGACGAAACTGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
       ::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::
b20512 GCTAACTCCGACGAAACCGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b13501 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20512 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13501 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20512 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13501 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20512 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
              370       380       390       400       410       420

              430       440       450       460       470       480
b13501 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20512 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13501 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20512 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
              490       500       510       520       530       540

              550     
b13501 AAAGTGGCTGCTGTT
       :::::::::::::::
b20512 AAAGTGGCTGCTGTT
              550     

</pre>
<hr>
<A name=b19049>
<pre>
>><a onClick="window.open('getRecord.php?id=b19049',
                                'cpndb_record'); return false;" href="getRecord.php?id=b19049" target=_"blank">b19049</a> CP002614 Salmonella enterica subsp. enterica se  (555 nt)
 initn: 2757 init1: 2757 opt: 2757  Z-score: 91.3  bits: 26.7 E():   53
banded Smith-Waterman score: 2757; 99.6% identity (99.6% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13501 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCCTGAAAGCCGTTGCTGCGGGCATG
       :::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
b19049 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCTTGAAAGCCGTTGCTGCGGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13501 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19049 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13501 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19049 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13501 GCTAACTCCGACGAAACTGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
       ::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::
b19049 GCTAACTCCGACGAAACCGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b13501 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19049 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13501 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19049 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13501 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19049 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
              370       380       390       400       410       420

              430       440       450       460       470       480
b13501 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19049 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13501 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b19049 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
              490       500       510       520       530       540

              550     
b13501 AAAGTGGCTGCTGTT
       :::::::::::::::
b19049 AAAGTGGCTGCTGTT
              550     

</pre>
<hr>
<A name=b21829>
<pre>
>><a onClick="window.open('getRecord.php?id=b21829',
                                'cpndb_record'); return false;" href="getRecord.php?id=b21829" target=_"blank">b21829</a> NZ_AMDX01000200 Salmonella enterica subsp. ente  (555 nt)
 initn: 2757 init1: 2757 opt: 2757  Z-score: 91.3  bits: 26.7 E():   53
banded Smith-Waterman score: 2757; 99.6% identity (99.6% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13501 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCCTGAAAGCCGTTGCTGCGGGCATG
       :::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
b21829 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCTTGAAAGCCGTTGCTGCGGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13501 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21829 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13501 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21829 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13501 GCTAACTCCGACGAAACTGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
       ::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::
b21829 GCTAACTCCGACGAAACCGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b13501 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21829 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13501 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21829 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13501 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21829 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
              370       380       390       400       410       420

              430       440       450       460       470       480
b13501 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21829 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13501 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21829 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
              490       500       510       520       530       540

              550     
b13501 AAAGTGGCTGCTGTT
       :::::::::::::::
b21829 AAAGTGGCTGCTGTT
              550     

</pre>
<hr>
<A name=b21810>
<pre>
>><a onClick="window.open('getRecord.php?id=b21810',
                                'cpndb_record'); return false;" href="getRecord.php?id=b21810" target=_"blank">b21810</a> AMED01000225 Salmonella enterica subsp. enteric  (555 nt)
 initn: 2757 init1: 2757 opt: 2757  Z-score: 91.3  bits: 26.7 E():   53
banded Smith-Waterman score: 2757; 99.6% identity (99.6% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13501 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCCTGAAAGCCGTTGCTGCGGGCATG
       :::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
b21810 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCTTGAAAGCCGTTGCTGCGGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13501 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21810 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13501 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21810 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13501 GCTAACTCCGACGAAACTGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
       ::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::
b21810 GCTAACTCCGACGAAACCGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b13501 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21810 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13501 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21810 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13501 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21810 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
              370       380       390       400       410       420

              430       440       450       460       470       480
b13501 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21810 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13501 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21810 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
              490       500       510       520       530       540

              550     
b13501 AAAGTGGCTGCTGTT
       :::::::::::::::
b21810 AAAGTGGCTGCTGTT
              550     

</pre>
<hr>
<A name=b21924>
<pre>
>><a onClick="window.open('getRecord.php?id=b21924',
                                'cpndb_record'); return false;" href="getRecord.php?id=b21924" target=_"blank">b21924</a> NZ_AMDZ01000198 Salmonella enterica subsp. ente  (555 nt)
 initn: 2757 init1: 2757 opt: 2757  Z-score: 91.3  bits: 26.7 E():   53
banded Smith-Waterman score: 2757; 99.6% identity (99.6% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13501 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCCTGAAAGCCGTTGCTGCGGGCATG
       :::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
b21924 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCTTGAAAGCCGTTGCTGCGGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13501 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21924 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13501 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21924 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13501 GCTAACTCCGACGAAACTGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
       ::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::
b21924 GCTAACTCCGACGAAACCGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b13501 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21924 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13501 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21924 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13501 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21924 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
              370       380       390       400       410       420

              430       440       450       460       470       480
b13501 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21924 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13501 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21924 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
              490       500       510       520       530       540

              550     
b13501 AAAGTGGCTGCTGTT
       :::::::::::::::
b21924 AAAGTGGCTGCTGTT
              550     

</pre>
<hr>
<A name=b1337>
<pre>
>><a onClick="window.open('getRecord.php?id=b1337',
                                'cpndb_record'); return false;" href="getRecord.php?id=b1337" target=_"blank">b1337</a> NC_003197 Salmonella typhimurium LT2, SGSC 1412   (555 nt)
 initn: 2757 init1: 2757 opt: 2757  Z-score: 91.3  bits: 26.7 E():   53
banded Smith-Waterman score: 2757; 99.6% identity (99.6% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13501 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCCTGAAAGCCGTTGCTGCGGGCATG
       :::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
b1337  GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCTTGAAAGCCGTTGCTGCGGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13501 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1337  AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13501 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1337  AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13501 GCTAACTCCGACGAAACTGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
       ::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::
b1337  GCTAACTCCGACGAAACCGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b13501 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1337  GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13501 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1337  GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13501 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1337  GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
              370       380       390       400       410       420

              430       440       450       460       470       480
b13501 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1337  GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13501 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b1337  GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
              490       500       510       520       530       540

              550     
b13501 AAAGTGGCTGCTGTT
       :::::::::::::::
b1337  AAAGTGGCTGCTGTT
              550     

</pre>
<hr>
<A name=b21808>
<pre>
>><a onClick="window.open('getRecord.php?id=b21808',
                                'cpndb_record'); return false;" href="getRecord.php?id=b21808" target=_"blank">b21808</a> AMEF01000246 Salmonella enterica subsp. enteric  (555 nt)
 initn: 2757 init1: 2757 opt: 2757  Z-score: 91.3  bits: 26.7 E():   53
banded Smith-Waterman score: 2757; 99.6% identity (99.6% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13501 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCCTGAAAGCCGTTGCTGCGGGCATG
       :::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
b21808 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCTTGAAAGCCGTTGCTGCGGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13501 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21808 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13501 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21808 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13501 GCTAACTCCGACGAAACTGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
       ::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::
b21808 GCTAACTCCGACGAAACCGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b13501 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21808 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13501 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21808 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13501 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21808 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
              370       380       390       400       410       420

              430       440       450       460       470       480
b13501 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21808 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13501 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21808 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
              490       500       510       520       530       540

              550     
b13501 AAAGTGGCTGCTGTT
       :::::::::::::::
b21808 AAAGTGGCTGCTGTT
              550     

</pre>
<hr>
<A name=b21922>
<pre>
>><a onClick="window.open('getRecord.php?id=b21922',
                                'cpndb_record'); return false;" href="getRecord.php?id=b21922" target=_"blank">b21922</a> NZ_AMEB01000192 Salmonella enterica subsp. ente  (555 nt)
 initn: 2757 init1: 2757 opt: 2757  Z-score: 91.3  bits: 26.7 E():   53
banded Smith-Waterman score: 2757; 99.6% identity (99.6% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13501 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCCTGAAAGCCGTTGCTGCGGGCATG
       :::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
b21922 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCTTGAAAGCCGTTGCTGCGGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13501 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21922 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13501 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21922 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13501 GCTAACTCCGACGAAACTGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
       ::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::
b21922 GCTAACTCCGACGAAACCGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b13501 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21922 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13501 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21922 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13501 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21922 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
              370       380       390       400       410       420

              430       440       450       460       470       480
b13501 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21922 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13501 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21922 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
              490       500       510       520       530       540

              550     
b13501 AAAGTGGCTGCTGTT
       :::::::::::::::
b21922 AAAGTGGCTGCTGTT
              550     

</pre>
<hr>
<A name=b20569>
<pre>
>><a onClick="window.open('getRecord.php?id=b20569',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20569" target=_"blank">b20569</a> NC_016857 Salmonella enterica subsp. enterica s  (555 nt)
 initn: 2757 init1: 2757 opt: 2757  Z-score: 91.3  bits: 26.7 E():   53
banded Smith-Waterman score: 2757; 99.6% identity (99.6% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13501 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCCTGAAAGCCGTTGCTGCGGGCATG
       :::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
b20569 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCTTGAAAGCCGTTGCTGCGGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13501 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20569 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13501 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20569 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13501 GCTAACTCCGACGAAACTGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
       ::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::
b20569 GCTAACTCCGACGAAACCGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b13501 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20569 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13501 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20569 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13501 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20569 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
              370       380       390       400       410       420

              430       440       450       460       470       480
b13501 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20569 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13501 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20569 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
              490       500       510       520       530       540

              550     
b13501 AAAGTGGCTGCTGTT
       :::::::::::::::
b20569 AAAGTGGCTGCTGTT
              550     

</pre>
<hr>
<A name=b21923>
<pre>
>><a onClick="window.open('getRecord.php?id=b21923',
                                'cpndb_record'); return false;" href="getRecord.php?id=b21923" target=_"blank">b21923</a> NZ_AMEA01000187 Salmonella enterica subsp. ente  (555 nt)
 initn: 2757 init1: 2757 opt: 2757  Z-score: 91.3  bits: 26.7 E():   53
banded Smith-Waterman score: 2757; 99.6% identity (99.6% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13501 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCCTGAAAGCCGTTGCTGCGGGCATG
       :::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
b21923 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCTTGAAAGCCGTTGCTGCGGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13501 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21923 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13501 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21923 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13501 GCTAACTCCGACGAAACTGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
       ::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::
b21923 GCTAACTCCGACGAAACCGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b13501 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21923 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13501 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21923 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13501 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21923 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
              370       380       390       400       410       420

              430       440       450       460       470       480
b13501 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21923 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13501 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21923 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
              490       500       510       520       530       540

              550     
b13501 AAAGTGGCTGCTGTT
       :::::::::::::::
b21923 AAAGTGGCTGCTGTT
              550     

</pre>
<hr>
<A name=b21809>
<pre>
>><a onClick="window.open('getRecord.php?id=b21809',
                                'cpndb_record'); return false;" href="getRecord.php?id=b21809" target=_"blank">b21809</a> AMEE01000185 Salmonella enterica subsp. enteric  (555 nt)
 initn: 2757 init1: 2757 opt: 2757  Z-score: 91.3  bits: 26.7 E():   53
banded Smith-Waterman score: 2757; 99.6% identity (99.6% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13501 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCCTGAAAGCCGTTGCTGCGGGCATG
       :::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
b21809 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCTTGAAAGCCGTTGCTGCGGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13501 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21809 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13501 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21809 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13501 GCTAACTCCGACGAAACTGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
       ::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::
b21809 GCTAACTCCGACGAAACCGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b13501 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21809 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13501 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21809 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13501 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21809 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
              370       380       390       400       410       420

              430       440       450       460       470       480
b13501 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21809 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13501 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21809 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
              490       500       510       520       530       540

              550     
b13501 AAAGTGGCTGCTGTT
       :::::::::::::::
b21809 AAAGTGGCTGCTGTT
              550     

</pre>
<hr>
<A name=b18575>
<pre>
>><a onClick="window.open('getRecord.php?id=b18575',
                                'cpndb_record'); return false;" href="getRecord.php?id=b18575" target=_"blank">b18575</a> CP002487 Salmonella enterica subsp. enterica se  (555 nt)
 initn: 2757 init1: 2757 opt: 2757  Z-score: 91.3  bits: 26.7 E():   53
banded Smith-Waterman score: 2757; 99.6% identity (99.6% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13501 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCCTGAAAGCCGTTGCTGCGGGCATG
       :::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
b18575 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCTTGAAAGCCGTTGCTGCGGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13501 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18575 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13501 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18575 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13501 GCTAACTCCGACGAAACTGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
       ::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::
b18575 GCTAACTCCGACGAAACCGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b13501 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18575 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13501 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18575 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13501 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18575 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
              370       380       390       400       410       420

              430       440       450       460       470       480
b13501 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18575 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13501 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18575 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
              490       500       510       520       530       540

              550     
b13501 AAAGTGGCTGCTGTT
       :::::::::::::::
b18575 AAAGTGGCTGCTGTT
              550     

</pre>
<hr>
<A name=b21921>
<pre>
>><a onClick="window.open('getRecord.php?id=b21921',
                                'cpndb_record'); return false;" href="getRecord.php?id=b21921" target=_"blank">b21921</a> NZ_AMEC01000233 Salmonella enterica subsp. ente  (555 nt)
 initn: 2757 init1: 2757 opt: 2757  Z-score: 91.3  bits: 26.7 E():   53
banded Smith-Waterman score: 2757; 99.6% identity (99.6% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b13501 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCCTGAAAGCCGTTGCTGCGGGCATG
       :::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
b21921 GCGACCGTACTGGCGCAGTCCATCATTACCGAAGGCTTGAAAGCCGTTGCTGCGGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b13501 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21921 AACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTGCTGCGGCGGTTGAAGAGCTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b13501 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21921 AAAGCCCTGTCCGTACCGTGCTCCGACTCTAAAGCGATTGCTCAGGTAGGTACTATCTCC
              130       140       150       160       170       180

              190       200       210       220       230       240
b13501 GCTAACTCCGACGAAACTGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
       ::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::
b21921 GCTAACTCCGACGAAACCGTAGGTAAACTGATCGCGGAAGCGATGGATAAAGTCGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b13501 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21921 GAAGGCGTCATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b13501 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21921 GGTATGCAGTTTGACCGCGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC
              310       320       330       340       350       360

              370       380       390       400       410       420
b13501 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21921 GCAGTAGAGCTGGAAAGCCCGTTCATCCTGCTGGCTGATAAGAAAATCTCCAACATCCGC
              370       380       390       400       410       420

              430       440       450       460       470       480
b13501 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21921 GAAATGCTGCCGGTTCTGGAAGCCGTTGCAAAAGCAGGCAAACCGCTGCTGATCATCGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b13501 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b21921 GAAGATGTTGAAGGCGAAGCGCTGGCTACCCTGGTTGTTAACACCATGCGTGGCATCGTG
              490       500       510       520       530       540

              550     
b13501 AAAGTGGCTGCTGTT
       :::::::::::::::
b21921 AAAGTGGCTGCTGTT
              550     

</pre>
<hr>
<p><pre>


555 residues in 1 query   sequences
10433008 residues in 18820 library sequences
 Scomplib [35.03]
 start: Mon Jul 22 02:41:17 2024 done: Mon Jul 22 02:41:19 2024
 Total Scan time:  2.170 Total Display time:  0.000

Function used was FASTA [version 35.03 Feb. 18, 2008]
</pre>