/var/www/html/cpndb/fasta_results/b12829.fasta# /data/www/cpndb/fasta35 -E 200 -Q -m 6 -b 20 -d 20 -z 2 -H /data/www/cpndb/fasta_results/b12829 /data/www/cpndb/blastDBs/reference_a_nut
<pre>
FASTA searches a protein or DNA sequence data bank
 version 35.03 Feb. 18, 2008
Please cite:
 W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

</pre>
Query: /data/www/cpndb/fasta_results/b12829
<pre>
  1>>>b12829 555 nt - 555 nt
Library: /data/www/cpndb/blastDBs/reference_a_nut 10433008 residues in 18820 sequences

10433008 residues in 18820 sequences
Statistics: MLE_cen statistics: Lambda= 0.0027;  K=1.736e-05 (cen=941)
Algorithm: FASTA (3.5 Sept 2006) [optimized]
Parameters: +5/-4 matrix (5:-4) ktup: 6
 join: 51, opt: 36, open/ext: -12/-4, width:  16
 Scan time:  2.440
</pre>
<p>
<hr>
<p>
<p><pre>

The best scores are:                                      opt bits E(18820)
<a onClick="window.open('getRecord.php?id=b27731',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27731" target=_"blank">b27731</a> NC_018139 Legionella  pneumophila  subs ( 555) [f] 2775 26.6      59 <A HREF="#b27731">align</A>
<a onClick="window.open('getRecord.php?id=b27843',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27843" target=_"blank">b27843</a> AVOV01000008 Legionella  pneumophila  s ( 555) [f] 2775 26.6      59 <A HREF="#b27843">align</A>
<a onClick="window.open('getRecord.php?id=b6873',
                                'cpndb_record'); return false;" href="getRecord.php?id=b6873" target=_"blank">b6873</a> NC_006368 Legionella pneumophila Paris   ( 555) [f] 2775 26.6      59 <A HREF="#b6873">align</A>
<a onClick="window.open('getRecord.php?id=b27844',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27844" target=_"blank">b27844</a> AVOW01000055 Legionella  pneumophila  s ( 555) [f] 2775 26.6      59 <A HREF="#b27844">align</A>
<a onClick="window.open('getRecord.php?id=b20453',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20453" target=_"blank">b20453</a> CP003192 Legionella pneumophila subsp.  ( 555) [f] 2766 26.5      60 <A HREF="#b20453">align</A>
<a onClick="window.open('getRecord.php?id=b10196',
                                'cpndb_record'); return false;" href="getRecord.php?id=b10196" target=_"blank">b10196</a> NC_009494 Legionella pneumophila str. C ( 555) [f] 2766 26.5      60 <A HREF="#b10196">align</A>
<a onClick="window.open('getRecord.php?id=b27730',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27730" target=_"blank">b27730</a> NC_018140 Legionella  pneumophila  subs ( 555) [f] 2766 26.5      60 <A HREF="#b27730">align</A>
<a onClick="window.open('getRecord.php?id=b20514',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20514" target=_"blank">b20514</a> NC_016811 Legionella pneumophila subsp. ( 555) [f] 2766 26.5      60 <A HREF="#b20514">align</A>
<a onClick="window.open('getRecord.php?id=b6863',
                                'cpndb_record'); return false;" href="getRecord.php?id=b6863" target=_"blank">b6863</a> NC_002942 Legionella pneumophila subsp.  ( 555) [f] 2730 26.4      66 <A HREF="#b6863">align</A>
<a onClick="window.open('getRecord.php?id=b120',
                                'cpndb_record'); return false;" href="getRecord.php?id=b120" target=_"blank">b120</a> M31918 Legionella pneumophila SVir        ( 555) [f] 2730 26.4      66 <A HREF="#b120">align</A>
<a onClick="window.open('getRecord.php?id=v71',
                                'cpndb_record'); return false;" href="getRecord.php?id=v71" target=_"blank">v71</a> 660 Legionella pneumophila                 ( 555) [f] 2703 26.3      71 <A HREF="#v71">align</A>
<a onClick="window.open('getRecord.php?id=b6872',
                                'cpndb_record'); return false;" href="getRecord.php?id=b6872" target=_"blank">b6872</a> NC_006369 Legionella pneumophila Lens    ( 555) [f] 2703 26.3      71 <A HREF="#b6872">align</A>
<a onClick="window.open('getRecord.php?id=b34829',
                                'cpndb_record'); return false;" href="getRecord.php?id=b34829" target=_"blank">b34829</a> NZ_CAAAIM010000011 Legionella  rowbotha ( 555) [f] 2176 24.2 2.9e+02 <A HREF="#b34829">align</A>
<a onClick="window.open('getRecord.php?id=b34826',
                                'cpndb_record'); return false;" href="getRecord.php?id=b34826" target=_"blank">b34826</a> NZ_CAAAIQ010000012 Legionella  waltersi ( 555) [f] 2140 24.1 3.2e+02 <A HREF="#b34826">align</A>
<a onClick="window.open('getRecord.php?id=b34832',
                                'cpndb_record'); return false;" href="getRecord.php?id=b34832" target=_"blank">b34832</a> NZ_CAAAIH010000002 Legionella  santicru ( 555) [f] 2095 23.9 3.6e+02 <A HREF="#b34832">align</A>
<a onClick="window.open('getRecord.php?id=b34824',
                                'cpndb_record'); return false;" href="getRecord.php?id=b34824" target=_"blank">b34824</a> NZ_CAAAJG010000017 Legionella  moravica ( 555) [f] 2095 23.9 3.6e+02 <A HREF="#b34824">align</A>
<a onClick="window.open('getRecord.php?id=b33760',
                                'cpndb_record'); return false;" href="getRecord.php?id=b33760" target=_"blank">b33760</a> NZ_UGPA01000001 Legionella  worsleiensi ( 555) [f] 2086 23.9 3.7e+02 <A HREF="#b33760">align</A>
<a onClick="window.open('getRecord.php?id=b34835',
                                'cpndb_record'); return false;" href="getRecord.php?id=b34835" target=_"blank">b34835</a> NZ_CAAAIO010000027 Legionella  steigerw ( 555) [f] 2086 23.9 3.7e+02 <A HREF="#b34835">align</A>
<a onClick="window.open('getRecord.php?id=b33744',
                                'cpndb_record'); return false;" href="getRecord.php?id=b33744" target=_"blank">b33744</a> NZ_UGNY01000001 Legionella  feeleii  NC ( 555) [f] 2086 23.9 3.7e+02 <A HREF="#b33744">align</A>
<a onClick="window.open('getRecord.php?id=b34530',
                                'cpndb_record'); return false;" href="getRecord.php?id=b34530" target=_"blank">b34530</a> NZ_LR134173  Legionella  cherrii NCTC11 ( 555) [f] 2077 23.9 3.8e+02 <A HREF="#b34530">align</A>
</pre><p><hr><p>

>>>b12829, 555 nt vs /data/www/cpndb/blastDBs/reference_a_nut library

<A name=b27731>
<pre>
>><a onClick="window.open('getRecord.php?id=b27731',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27731" target=_"blank">b27731</a> NC_018139 Legionella  pneumophila  subsp. pneum  (555 nt)
 initn: 2775 init1: 2775 opt: 2775  Z-score: 90.5  bits: 26.6 E():   59
banded Smith-Waterman score: 2775; 100.0% identity (100.0% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b12829 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27731 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12829 AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27731 AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b12829 CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27731 CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b12829 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27731 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12829 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27731 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12829 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27731 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12829 AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27731 AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12829 GAAATGTTGTCCGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCTTTATTGATCATCGCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27731 GAAATGTTGTCCGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCTTTATTGATCATCGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b12829 GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27731 GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
              490       500       510       520       530       540

              550     
b12829 AAAGTATGTGCTGTC
       :::::::::::::::
b27731 AAAGTATGTGCTGTC
              550     

</pre>
<hr>
<A name=b27843>
<pre>
>><a onClick="window.open('getRecord.php?id=b27843',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27843" target=_"blank">b27843</a> AVOV01000008 Legionella  pneumophila  str. Leg0  (555 nt)
 initn: 2775 init1: 2775 opt: 2775  Z-score: 90.5  bits: 26.6 E():   59
banded Smith-Waterman score: 2775; 100.0% identity (100.0% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b12829 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27843 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12829 AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27843 AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b12829 CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27843 CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b12829 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27843 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12829 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27843 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12829 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27843 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12829 AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27843 AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12829 GAAATGTTGTCCGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCTTTATTGATCATCGCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27843 GAAATGTTGTCCGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCTTTATTGATCATCGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b12829 GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27843 GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
              490       500       510       520       530       540

              550     
b12829 AAAGTATGTGCTGTC
       :::::::::::::::
b27843 AAAGTATGTGCTGTC
              550     

</pre>
<hr>
<A name=b6873>
<pre>
>><a onClick="window.open('getRecord.php?id=b6873',
                                'cpndb_record'); return false;" href="getRecord.php?id=b6873" target=_"blank">b6873</a> NC_006368 Legionella pneumophila Paris            (555 nt)
 initn: 2775 init1: 2775 opt: 2775  Z-score: 90.5  bits: 26.6 E():   59
banded Smith-Waterman score: 2775; 100.0% identity (100.0% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b12829 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b6873  GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12829 AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b6873  AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b12829 CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b6873  CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b12829 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b6873  GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12829 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b6873  GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12829 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b6873  GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12829 AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b6873  AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12829 GAAATGTTGTCCGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCTTTATTGATCATCGCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b6873  GAAATGTTGTCCGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCTTTATTGATCATCGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b12829 GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b6873  GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
              490       500       510       520       530       540

              550     
b12829 AAAGTATGTGCTGTC
       :::::::::::::::
b6873  AAAGTATGTGCTGTC
              550     

</pre>
<hr>
<A name=b27844>
<pre>
>><a onClick="window.open('getRecord.php?id=b27844',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27844" target=_"blank">b27844</a> AVOW01000055 Legionella  pneumophila  str. Leg0  (555 nt)
 initn: 2775 init1: 2775 opt: 2775  Z-score: 90.5  bits: 26.6 E():   59
banded Smith-Waterman score: 2775; 100.0% identity (100.0% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b12829 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27844 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12829 AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27844 AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b12829 CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27844 CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b12829 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27844 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12829 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27844 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12829 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27844 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12829 AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27844 AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12829 GAAATGTTGTCCGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCTTTATTGATCATCGCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27844 GAAATGTTGTCCGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCTTTATTGATCATCGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b12829 GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27844 GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
              490       500       510       520       530       540

              550     
b12829 AAAGTATGTGCTGTC
       :::::::::::::::
b27844 AAAGTATGTGCTGTC
              550     

</pre>
<hr>
<A name=b20453>
<pre>
>><a onClick="window.open('getRecord.php?id=b20453',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20453" target=_"blank">b20453</a> CP003192 Legionella pneumophila subsp. pneumoph  (555 nt)
 initn: 2766 init1: 2766 opt: 2766  Z-score: 90.3  bits: 26.5 E():   60
banded Smith-Waterman score: 2766; 99.8% identity (99.8% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b12829 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20453 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12829 AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20453 AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b12829 CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20453 CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b12829 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20453 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12829 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20453 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12829 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20453 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12829 AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20453 AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12829 GAAATGTTGTCCGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCTTTATTGATCATCGCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20453 GAAATGTTGTCCGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCTTTATTGATCATCGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b12829 GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20453 GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
              490       500       510       520       530       540

              550     
b12829 AAAGTATGTGCTGTC
       ::: :::::::::::
b20453 AAAATATGTGCTGTC
              550     

</pre>
<hr>
<A name=b10196>
<pre>
>><a onClick="window.open('getRecord.php?id=b10196',
                                'cpndb_record'); return false;" href="getRecord.php?id=b10196" target=_"blank">b10196</a> NC_009494 Legionella pneumophila str. Corby      (555 nt)
 initn: 2766 init1: 2766 opt: 2766  Z-score: 90.3  bits: 26.5 E():   60
banded Smith-Waterman score: 2766; 99.8% identity (99.8% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b12829 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10196 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12829 AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10196 AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b12829 CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10196 CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b12829 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       :::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::
b10196 GCTAATTCTGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12829 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10196 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12829 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10196 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12829 AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10196 AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12829 GAAATGTTGTCCGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCTTTATTGATCATCGCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10196 GAAATGTTGTCCGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCTTTATTGATCATCGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b12829 GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10196 GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
              490       500       510       520       530       540

              550     
b12829 AAAGTATGTGCTGTC
       :::::::::::::::
b10196 AAAGTATGTGCTGTC
              550     

</pre>
<hr>
<A name=b27730>
<pre>
>><a onClick="window.open('getRecord.php?id=b27730',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27730" target=_"blank">b27730</a> NC_018140 Legionella  pneumophila  subsp. pneum  (555 nt)
 initn: 2766 init1: 2766 opt: 2766  Z-score: 90.3  bits: 26.5 E():   60
banded Smith-Waterman score: 2766; 99.8% identity (99.8% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b12829 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27730 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12829 AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27730 AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b12829 CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27730 CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b12829 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27730 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12829 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27730 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12829 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27730 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12829 AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27730 AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12829 GAAATGTTGTCCGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCTTTATTGATCATCGCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27730 GAAATGTTGTCCGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCTTTATTGATCATCGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b12829 GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
       :::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::
b27730 GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTCAACAACATGCGCGGTATTGTA
              490       500       510       520       530       540

              550     
b12829 AAAGTATGTGCTGTC
       :::::::::::::::
b27730 AAAGTATGTGCTGTC
              550     

</pre>
<hr>
<A name=b20514>
<pre>
>><a onClick="window.open('getRecord.php?id=b20514',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20514" target=_"blank">b20514</a> NC_016811 Legionella pneumophila subsp. pneumop  (555 nt)
 initn: 2766 init1: 2766 opt: 2766  Z-score: 90.3  bits: 26.5 E():   60
banded Smith-Waterman score: 2766; 99.8% identity (99.8% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b12829 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20514 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12829 AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20514 AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b12829 CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20514 CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b12829 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20514 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12829 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20514 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12829 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20514 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12829 AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20514 AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12829 GAAATGTTGTCCGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCTTTATTGATCATCGCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20514 GAAATGTTGTCCGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCTTTATTGATCATCGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b12829 GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20514 GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
              490       500       510       520       530       540

              550     
b12829 AAAGTATGTGCTGTC
       ::: :::::::::::
b20514 AAAATATGTGCTGTC
              550     

</pre>
<hr>
<A name=b6863>
<pre>
>><a onClick="window.open('getRecord.php?id=b6863',
                                'cpndb_record'); return false;" href="getRecord.php?id=b6863" target=_"blank">b6863</a> NC_002942 Legionella pneumophila subsp. pneumoph  (555 nt)
 initn: 2730 init1: 2730 opt: 2730  Z-score: 89.5  bits: 26.4 E():   66
banded Smith-Waterman score: 2730; 99.1% identity (99.1% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b12829 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b6863  GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12829 AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b6863  AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b12829 CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b6863  CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b12829 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b6863  GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12829 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b6863  GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12829 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
       :::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::
b6863  GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTTATCAACAACCAGCAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12829 AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b6863  AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12829 GAAATGTTGTCCGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCTTTATTGATCATCGCA
       ::::::::::::::::::::::::::::: :::::::: ::::::::::::::::: :::
b6863  GAAATGTTGTCCGTATTGGAAGGTGTTGCCAAATCTGGTCGTCCTTTATTGATCATTGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b12829 GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
       :::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::
b6863  GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTCAACAACATGCGCGGTATTGTA
              490       500       510       520       530       540

              550     
b12829 AAAGTATGTGCTGTC
       :::::::::::::::
b6863  AAAGTATGTGCTGTC
              550     

</pre>
<hr>
<A name=b120>
<pre>
>><a onClick="window.open('getRecord.php?id=b120',
                                'cpndb_record'); return false;" href="getRecord.php?id=b120" target=_"blank">b120</a> M31918 Legionella pneumophila SVir                 (555 nt)
 initn: 2730 init1: 2730 opt: 2730  Z-score: 89.5  bits: 26.4 E():   66
banded Smith-Waterman score: 2730; 99.1% identity (99.1% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b12829 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b120   GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12829 AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b120   AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b12829 CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
       ::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::
b120   CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCCATTGCTCAAGTTGGAACTATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b12829 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b120   GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12829 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::
b120   GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTATGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12829 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b120   GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12829 AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b120   AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12829 GAAATGTTGTCCGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCTTTATTGATCATCGCA
       ::::::::::::::::::::::::::::: ::::::::::::::::: ::::::::::::
b120   GAAATGTTGTCCGTATTGGAAGGTGTTGCTAAATCTGGCCGTCCTTTGTTGATCATCGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b12829 GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
       :::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::
b120   GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTCAACAACATGCGCGGTATTGTA
              490       500       510       520       530       540

              550     
b12829 AAAGTATGTGCTGTC
       :::::::::::::::
b120   AAAGTATGTGCTGTC
              550     

</pre>
<hr>
<A name=v71>
<pre>
>><a onClick="window.open('getRecord.php?id=v71',
                                'cpndb_record'); return false;" href="getRecord.php?id=v71" target=_"blank">v71</a> 660 Legionella pneumophila                          (555 nt)
 initn: 2703 init1: 2703 opt: 2703  Z-score: 89.0  bits: 26.3 E():   71
banded Smith-Waterman score: 2703; 98.6% identity (98.6% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b12829 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
v71    GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCCGGTATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12829 AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
       ::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::
v71    AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTGGCAGTTACCAAAAAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b12829 CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
v71    CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b12829 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
v71    GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12829 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       ::::::::::: :: :::::::::::::::::::::::::::::::::::::::::::::
v71    GAGGGTGTTATCACTGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12829 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
v71    GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12829 AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
v71    AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12829 GAAATGTTGTCCGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCTTTATTGATCATCGCA
       ::::::::::::::::: ::::::::::: :::::::: :::::::::::::: ::::::
v71    GAAATGTTGTCCGTATTAGAAGGTGTTGCCAAATCTGGACGTCCTTTATTGATTATCGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b12829 GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
v71    GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
              490       500       510       520       530       540

              550     
b12829 AAAGTATGTGCTGTC
       :::::::::::::::
v71    AAAGTATGTGCTGTC
              550     

</pre>
<hr>
<A name=b6872>
<pre>
>><a onClick="window.open('getRecord.php?id=b6872',
                                'cpndb_record'); return false;" href="getRecord.php?id=b6872" target=_"blank">b6872</a> NC_006369 Legionella pneumophila Lens             (555 nt)
 initn: 2703 init1: 2703 opt: 2703  Z-score: 89.0  bits: 26.3 E():   71
banded Smith-Waterman score: 2703; 98.6% identity (98.6% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b12829 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
b6872  GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCCGGTATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12829 AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
       ::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::
b6872  AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTGGCAGTTACCAAAAAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b12829 CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b6872  CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b12829 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b6872  GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12829 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       ::::::::::: :: :::::::::::::::::::::::::::::::::::::::::::::
b6872  GAGGGTGTTATCACTGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12829 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b6872  GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12829 AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b6872  AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12829 GAAATGTTGTCCGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCTTTATTGATCATCGCA
       ::::::::::::::::: ::::::::::: :::::::: :::::::::::::: ::::::
b6872  GAAATGTTGTCCGTATTAGAAGGTGTTGCCAAATCTGGACGTCCTTTATTGATTATCGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b12829 GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b6872  GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
              490       500       510       520       530       540

              550     
b12829 AAAGTATGTGCTGTC
       :::::::::::::::
b6872  AAAGTATGTGCTGTC
              550     

</pre>
<hr>
<A name=b34829>
<pre>
>><a onClick="window.open('getRecord.php?id=b34829',
                                'cpndb_record'); return false;" href="getRecord.php?id=b34829" target=_"blank">b34829</a> NZ_CAAAIM010000011 Legionella  rowbothamii  LLA  (555 nt)
 initn: 2122 init1: 2122 opt: 2176  Z-score: 77.9  bits: 24.2 E(): 2.9e+02
banded Smith-Waterman score: 2176; 88.1% identity (88.1% similar) in 554 nt overlap (1-554:1-554)
<p>

               10        20        30        40        50        60
b12829 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
       :: :: ::::: ::::: :::::::::::::::::: ::::::::::::::::::: :::
b34829 GCTACTGTATTAGCTCGCTCTATTCTTGTTGAAGGTAACAAAGCAGTTGCTGCTGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12829 AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
       :: :: :::::::: :::::::::::::::::::: ::  : :::::::: :: ::::::
b34829 AACCCCATGGATCTGAAACGCGGTATTGATAAAGCGGTTCTGGCAGTTACTAAGAAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b12829 CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
       ::: :::::::::::::::::::::::: :::::: :: ::::::::::: :::::::::
b34829 CAATCTATGTCTAAGCCATGCAAAGACAACAAAGCAATCGCTCAAGTTGGTACTATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b12829 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       ::::: :: :: ::::: :::::: :::::::::::   :: ::::::::::::::::::
b34829 GCTAACTCTGACGAAGCAATTGGTTCTATCATTGCTAGCGCTATGGAAAAAGTTGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12829 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       :: :::::::: :: :: ::::::::::::::::: :: :::::  : :: :::::::::
b34829 GAAGGTGTTATCACTGTCGAAGATGGTAATGGATTAGAGAATGAATTATCAGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12829 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
       ::::::::::::::::: :: ::::::::::::::::::::::::::::: :::::::::
b34829 GGTATGCAATTTGATCGTGGATACATTTCTCCATACTTCATCAACAACCAACAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12829 AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
       ::::: ::: : ::::: ::::::::: : :: :::::::: ::: : :: :: :: :::
b34829 AGCTGCGAATTAGAGCACCCATTCATTCTGTTAGTTGACAAGAAAATCTCTAGCATCCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12829 GAAATGTTGTCCGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCTTTATTGATCATCGCA
       :: ::::: :: :::::::::::::::::::::::::::::::: :::::::: ::::: 
b34829 GATATGTTATCTGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCATTATTGATTATCGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b12829 GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
       :::::::::::::: ::::::::::::::::: :: :::::::::::::: :::::::: 
b34829 GAAGATGTTGAAGGTGAAGCTTTAGCTACTCTAGTTGTTAACAACATGCGTGGTATTGTT
              490       500       510       520       530       540

              550     
b12829 AAAGTATGTGCTGTC
       :::::::::::::: 
b34829 AAAGTATGTGCTGTT
              550     

</pre>
<hr>
<A name=b34826>
<pre>
>><a onClick="window.open('getRecord.php?id=b34826',
                                'cpndb_record'); return false;" href="getRecord.php?id=b34826" target=_"blank">b34826</a> NZ_CAAAIQ010000012 Legionella  waltersii  2074-  (555 nt)
 initn: 2128 init1: 2128 opt: 2140  Z-score: 77.2  bits: 24.1 E(): 3.2e+02
banded Smith-Waterman score: 2140; 87.4% identity (87.4% similar) in 554 nt overlap (1-554:1-554)
<p>

               10        20        30        40        50        60
b12829 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
       :: :: :::::::: ::::::::::::::::::::::: :::::::::::::::::::::
b34826 GCTACTGTATTGGCACGTTCTATTCTTGTTGAAGGTCATAAAGCAGTTGCTGCTGGTATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12829 AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
       :: ::::::::::: ::::: ::::: :: ::::::::::::::::: :: :: ::: : 
b34826 AACCCAATGGATCTAAAACGTGGTATCGACAAAGCAGTATTAGCAGTCACTAAGAAACTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b12829 CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
       ::: : :::::::::::::::::::::: :::::: ::::::::::: :: :::::::::
b34826 CAATCCATGTCTAAGCCATGCAAAGACAACAAAGCAATTGCTCAAGTGGGCACTATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b12829 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       ::::: :: ::::::::: :::: :: :::::::::::::::::::: ::::: ::::::
b34826 GCTAACTCTGATGAAGCGGTTGGAGCAATCATTGCTGAAGCAATGGAGAAAGTAGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12829 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       :: :: :: ::::: :::::::: ::::::::  : ::::::::  : :: :::::::::
b34826 GAAGGCGTCATTACTGTTGAAGACGGTAATGGTCTTGAAAATGAATTGTCGGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12829 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
       :::::::::::::: :: :: :::::::::::::::::::: :::::::: :::::::::
b34826 GGTATGCAATTTGACCGTGGATACATTTCTCCATACTTCATTAACAACCAACAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12829 AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
          ::::::::::: :: :::::: : ::::::::::: :::::::: :: :: ::::::
b34826 TCTTGTGAACTTGAACACCCATTCGTGTTATTGGTTGATAAAAAAGTATCAAGCATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12829 GAAATGTTGTCCGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCTTTATTGATCATCGCA
       :: :::::::: ::::::::::: ::::: :::::::: ::::: :: ::::::::::::
b34826 GAGATGTTGTCTGTATTGGAAGGCGTTGCTAAATCTGGTCGTCCATTGTTGATCATCGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b12829 GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
       :::::  ::::::::::::: ::::: ::::: :: :::::::::::::: :::::::: 
b34826 GAAGACATTGAAGGCGAAGCCTTAGCAACTCTAGTTGTTAACAACATGCGTGGTATTGTC
              490       500       510       520       530       540

              550     
b12829 AAAGTATGTGCTGTC
       :::::::::::::: 
b34826 AAAGTATGTGCTGTT
              550     

</pre>
<hr>
<A name=b34832>
<pre>
>><a onClick="window.open('getRecord.php?id=b34832',
                                'cpndb_record'); return false;" href="getRecord.php?id=b34832" target=_"blank">b34832</a> NZ_CAAAIH010000002 Legionella  santicrucis  SC-  (555 nt)
 initn: 2083 init1: 2083 opt: 2095  Z-score: 76.2  bits: 23.9 E(): 3.6e+02
banded Smith-Waterman score: 2095; 86.5% identity (86.5% similar) in 554 nt overlap (1-554:1-554)
<p>

               10        20        30        40        50        60
b12829 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
       :: :: :::::::::::: ::::: : ::::::::  : :::::: :::: ::::: :::
b34832 GCTACTGTATTGGCTCGTGCTATTGTGGTTGAAGGCTATAAAGCAATTGCAGCTGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12829 AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
       ::::: :::::: : :: :: ::::::::::::::::: :  ::: : ::::::::::::
b34832 AATCCTATGGATTTGAAGCGTGGTATTGATAAAGCAGTTTCTGCAATCACCAAAAAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b12829 CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
       ::: : ::::::::::: :::::::::: :::::: ::::: ::::: :: :::::::::
b34832 CAAACCATGTCTAAGCCTTGCAAAGACAACAAAGCAATTGCACAAGTAGGTACTATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b12829 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       ::::: :: :::::::: :::::: : :: ::::::   :::::::: ::::: ::::::
b34832 GCTAACTCTGATGAAGCAATTGGTTCAATTATTGCTAGTGCAATGGATAAAGTAGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12829 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       :: ::::::::::: :::::::: ::::::::::::::::::::  : ::::::::::::
b34832 GAAGGTGTTATTACTGTTGAAGACGGTAATGGATTGGAAAATGAATTATCTGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12829 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
       :: ::::: :::::::: :: :: ::::::::::::::::::::::: :: :::: ::::
b34832 GGGATGCAGTTTGATCGTGGATATATTTCTCCATACTTCATCAACAATCAACAAAGCATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12829 AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
       :  ::::: :::::::::::::::::: : :: ::::: :: ::: :::: :: ::::::
b34832 ACTTGTGAGCTTGAGCATCCATTCATTCTGTTAGTTGATAAGAAAATTTCTAGCATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12829 GAAATGTTGTCCGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCTTTATTGATCATCGCA
       :: :::::::: :::::::::::::::::::::::::::::::: :::::::: :: :: 
b34832 GATATGTTGTCTGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCATTATTGATTATTGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b12829 GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
       :::::::::::::: ::::::::::::::: : :::::::::::::::::::::::::: 
b34832 GAAGATGTTGAAGGTGAAGCTTTAGCTACTTTAGTAGTTAACAACATGCGCGGTATTGTT
              490       500       510       520       530       540

              550     
b12829 AAAGTATGTGCTGTC
       :::::::::::::: 
b34832 AAAGTATGTGCTGTT
              550     

</pre>
<hr>
<A name=b34824>
<pre>
>><a onClick="window.open('getRecord.php?id=b34824',
                                'cpndb_record'); return false;" href="getRecord.php?id=b34824" target=_"blank">b34824</a> NZ_CAAAJG010000017 Legionella  moravica  316-86  (555 nt)
 initn: 2065 init1: 2065 opt: 2095  Z-score: 76.2  bits: 23.9 E(): 3.6e+02
banded Smith-Waterman score: 2095; 86.5% identity (86.5% similar) in 554 nt overlap (1-554:1-554)
<p>

               10        20        30        40        50        60
b12829 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
       :: :: :: :: :: ::::::::::::::::::::  : ::::: :::::::: ::::::
b34824 GCTACTGTTTTAGCACGTTCTATTCTTGTTGAAGGAAATAAAGCGGTTGCTGCCGGTATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12829 AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
       :::::::::::::: ::::::::::: :: ::::::::::: :: ::::: :::: ::::
b34824 AATCCAATGGATCTGAAACGCGGTATAGACAAAGCAGTATTGGCTGTTACTAAAAGATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b12829 CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
       ::::  ::::: ::::: :: ::::: : :::::: ::::: :::::::: :::::::: 
b34824 CAAGAGATGTCCAAGCCTTGTAAAGATACCAAAGCAATTGCACAAGTTGGTACTATTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b12829 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       ::::: :: :: ::::: :::::: :::: :::::::::::::::::::: ::::: :::
b34824 GCTAACTCTGACGAAGCTATTGGTTCTATTATTGCTGAAGCAATGGAAAAGGTTGGCAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12829 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       :: :: :: :: :: :::::::: :: :::::  : :: :::::  : ::::::::::::
b34824 GAAGGCGTGATCACTGTTGAAGACGGCAATGGTCTTGAGAATGAATTATCTGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12829 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
       :: :::::::::::::::::::::::::::::::::::::::::::: :: :::::::::
b34824 GGAATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAATCAACAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12829 AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
       :  :::::::: ::::::::::::::: : :: :::::::: ::::::::::: ::::::
b34824 ACTTGTGAACTGGAGCATCCATTCATTCTGTTAGTTGACAAGAAAGTTTCCAGCATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12829 GAAATGTTGTCCGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCTTTATTGATCATCGCA
       :: :::::::: ::  : ::::: ::::::::::: ::::::::::::::::: :: :::
b34824 GACATGTTGTCAGTTCTTGAAGGCGTTGCAAAATCAGGCCGTCCTTTATTGATTATTGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b12829 GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
       ::::::::::::::::::::::: :: ::::::::::: :: ::::::::::::::::: 
b34824 GAAGATGTTGAAGGCGAAGCTTTGGCAACTCTGGTAGTGAATAACATGCGCGGTATTGTT
              490       500       510       520       530       540

              550     
b12829 AAAGTATGTGCTGTC
       :::::::::::::: 
b34824 AAAGTATGTGCTGTT
              550     

</pre>
<hr>
<A name=b33760>
<pre>
>><a onClick="window.open('getRecord.php?id=b33760',
                                'cpndb_record'); return false;" href="getRecord.php?id=b33760" target=_"blank">b33760</a> NZ_UGPA01000001 Legionella  worsleiensis  NCTC1  (555 nt)
 initn: 2057 init1: 2057 opt: 2086  Z-score: 76.1  bits: 23.9 E(): 3.7e+02
banded Smith-Waterman score: 2086; 86.3% identity (86.3% similar) in 554 nt overlap (1-554:1-554)
<p>

               10        20        30        40        50        60
b12829 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
       :: :: ::: :::::::::: ::::::::::::::  :::: ::::::::::::::::::
b33760 GCGACTGTACTGGCTCGTTCCATTCTTGTTGAAGGAAACAAGGCAGTTGCTGCTGGTATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12829 AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
       ::::: :::::: : ::::::::::: :: ::::: ::: : :: :: :: :::::::::
b33760 AATCCTATGGATTTAAAACGCGGTATAGACAAAGCGGTACTGGCTGTAACTAAAAAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b12829 CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
       ::::  ::::: ::::::::::::::::  ::::: ::::: :::::::: :: ::::: 
b33760 CAAGAAATGTCCAAGCCATGCAAAGACACTAAAGCAATTGCACAAGTTGGTACGATTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b12829 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       :: :: :: :: ::::: :::::: :::: ::::::::::::::::::::::: ::::::
b33760 GCCAACTCTGACGAAGCAATTGGTTCTATTATTGCTGAAGCAATGGAAAAAGTAGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12829 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       :: :: ::::::::::::::::: :: :::::  : :::::::: :: ::::::::::::
b33760 GAAGGCGTTATTACCGTTGAAGACGGCAATGGTCTTGAAAATGAACTGTCTGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12829 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
       :: :::::::::::::: :: :::::::::::::::::::::::::::::::::::::::
b33760 GGAATGCAATTTGATCGTGGATACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12829 AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
       : ::::::::: :: :::::::::::  : :: :::::::: ::: :::::::::: :::
b33760 ACCTGTGAACTGGAACATCCATTCATCCTGTTAGTTGACAAGAAAATTTCCAGTATCCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12829 GAAATGTTGTCCGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCTTTATTGATCATCGCA
       :: ::: :::: ::  ::::::::::::: ::::: :: :::::::: ::::: ::::: 
b33760 GACATGCTGTCTGTTCTGGAAGGTGTTGCCAAATCCGGTCGTCCTTTGTTGATTATCGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b12829 GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
       :::::::::::::: :: :: :::::::::::::: :::::::::::::: :::::::: 
b33760 GAAGATGTTGAAGGAGAGGCGTTAGCTACTCTGGTTGTTAACAACATGCGTGGTATTGTC
              490       500       510       520       530       540

              550     
b12829 AAAGTATGTGCTGTC
       ::::::::::: :: 
b33760 AAAGTATGTGCGGTT
              550     

</pre>
<hr>
<A name=b34835>
<pre>
>><a onClick="window.open('getRecord.php?id=b34835',
                                'cpndb_record'); return false;" href="getRecord.php?id=b34835" target=_"blank">b34835</a> NZ_CAAAIO010000027 Legionella  steigerwaltii  S  (555 nt)
 initn: 2068 init1: 2068 opt: 2086  Z-score: 76.1  bits: 23.9 E(): 3.7e+02
banded Smith-Waterman score: 2086; 86.3% identity (86.3% similar) in 554 nt overlap (1-554:1-554)
<p>

               10        20        30        40        50        60
b12829 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
       :: :: :::::::::::: : ::: ::::::::::  :::::::: ::::::: ::::::
b34835 GCTACTGTATTGGCTCGTGCGATTGTTGTTGAAGGGTACAAAGCAATTGCTGCGGGTATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12829 AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
       ::::: :::::::: :: :::::::: :: ::::: ::    ::: : ::::::::::: 
b34835 AATCCTATGGATCTGAAGCGCGGTATCGACAAAGCTGTTACTGCAATCACCAAAAAATTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b12829 CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
       ::: ::::::::::::: ::::::::::  ::::: ::::::::::: :: :::::::::
b34835 CAATCTATGTCTAAGCCTTGCAAAGACAATAAAGCAATTGCTCAAGTAGGTACTATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b12829 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       ::::: :: :::::::: :::::: :::: ::::::   :::::::: ::::: ::::::
b34835 GCTAACTCTGATGAAGCAATTGGTTCTATTATTGCTAGTGCAATGGATAAAGTGGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12829 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       :: ::::::::::: :::::::: ::::::::  : ::::::::  : ::::::::::::
b34835 GAAGGTGTTATTACTGTTGAAGACGGTAATGGGCTTGAAAATGAATTGTCTGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12829 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
       :::::::: :::::::::::::: ::::::::::::::::::::::: :: :::::::::
b34835 GGTATGCAGTTTGATCGCGGTTATATTTCTCCATACTTCATCAACAATCAACAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12829 AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
       :  ::::: :::::::::::::::::: : ::::::::::: ::: : ::::::::::::
b34835 ACTTGTGAGCTTGAGCATCCATTCATTCTGTTGGTTGACAAGAAAATCTCCAGTATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12829 GAAATGTTGTCCGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCTTTATTGATCATCGCA
       :: :::::::: ::::::::::: ::::::::::: :: ::::: :: ::::: ::::: 
b34835 GACATGTTGTCTGTATTGGAAGGGGTTGCAAAATCAGGACGTCCATTGTTGATTATCGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b12829 GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
       :::::::: ::::::::::::::::: ::::: :: :::::::::::::: :::::::: 
b34835 GAAGATGTCGAAGGCGAAGCTTTAGCAACTCTAGTTGTTAACAACATGCGTGGTATTGTT
              490       500       510       520       530       540

              550     
b12829 AAAGTATGTGCTGTC
       ::::::::::: :: 
b34835 AAAGTATGTGCAGTT
              550     

</pre>
<hr>
<A name=b33744>
<pre>
>><a onClick="window.open('getRecord.php?id=b33744',
                                'cpndb_record'); return false;" href="getRecord.php?id=b33744" target=_"blank">b33744</a> NZ_UGNY01000001 Legionella  feeleii  NCTC11978   (555 nt)
 initn: 2053 init1: 2053 opt: 2086  Z-score: 76.1  bits: 23.9 E(): 3.7e+02
banded Smith-Waterman score: 2086; 86.3% identity (86.3% similar) in 554 nt overlap (1-554:1-554)
<p>

               10        20        30        40        50        60
b12829 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
       ::::: ::: : :::::: : ::::: :: :::::::: ::::::::::::::::: :::
b33744 GCAACTGTACTTGCTCGTGCGATTCTGGTGGAAGGTCATAAAGCAGTTGCTGCTGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12829 AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
       ::::: :::::::: :: :: ::::::::::::::::::  :::::: :::::  :::: 
b33744 AATCCTATGGATCTTAAGCGTGGTATTGATAAAGCAGTAACAGCAGTAACCAAGCAATTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b12829 CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
       ::: : ::::::::::: ::::::::  ::::::: ::::: ::::: :: :::::::::
b33744 CAATCAATGTCTAAGCCTTGCAAAGATGGCAAAGCGATTGCACAAGTAGGTACTATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b12829 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       ::::: :: ::: :::: :: ::: :::::::::::::::::::::::::::: ::::::
b33744 GCTAACTCTGATCAAGCCATCGGTTCTATCATTGCTGAAGCAATGGAAAAAGTAGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12829 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       :: :: :::::::: :: :::::::::::  :  ::::::::::  : ::::: ::::::
b33744 GAAGGCGTTATTACTGTCGAAGATGGTAACAGCCTGGAAAATGAATTATCTGTGGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12829 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
       :::::::::::::: :::::::: :::::::: :::::::::::::::::::::::::::
b33744 GGTATGCAATTTGACCGCGGTTATATTTCTCCGTACTTCATCAACAACCAGCAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12829 AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
       ::   ::: ::::: :: ::::::::: ::::::::::::: ::: : :: :::::::::
b33744 AGTGCTGAGCTTGAACACCCATTCATTCTATTGGTTGACAAGAAAATCTCTAGTATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12829 GAAATGTTGTCCGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCTTTATTGATCATCGCA
       :: :::::::: :::::::::: :::::: :::::::::::::::::: :::: ::::: 
b33744 GATATGTTGTCTGTATTGGAAGCTGTTGCTAAATCTGGCCGTCCTTTACTGATTATCGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b12829 GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
       :::::::::::::: ::::: :: ::::: ::::: ::::::::::::::::: :: :: 
b33744 GAAGATGTTGAAGGTGAAGCGTTGGCTACACTGGTTGTTAACAACATGCGCGGCATCGTT
              490       500       510       520       530       540

              550     
b12829 AAAGTATGTGCTGTC
       :::::::::::::: 
b33744 AAAGTATGTGCTGTT
              550     

</pre>
<hr>
<A name=b34530>
<pre>
>><a onClick="window.open('getRecord.php?id=b34530',
                                'cpndb_record'); return false;" href="getRecord.php?id=b34530" target=_"blank">b34530</a> NZ_LR134173  Legionella  cherrii NCTC11976       (555 nt)
 initn: 2042 init1: 2042 opt: 2077  Z-score: 75.9  bits: 23.9 E(): 3.8e+02
banded Smith-Waterman score: 2077; 86.1% identity (86.1% similar) in 554 nt overlap (1-554:1-554)
<p>

               10        20        30        40        50        60
b12829 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
       :: :: ::: :::::::: : ::: ::::::::::  :::: ::: ::::::: ::::::
b34530 GCTACTGTACTGGCTCGTGCGATTGTTGTTGAAGGGTACAAGGCAATTGCTGCGGGTATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12829 AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
       ::::: :::::::: :: :::::::: :: ::::: ::    ::: : ::::::::::: 
b34530 AATCCTATGGATCTGAAGCGCGGTATCGACAAAGCGGTTGCTGCAATCACCAAAAAATTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b12829 CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
       ::: ::::::::::::: ::::::::::  ::::: ::::::::::: :: :::::::::
b34530 CAATCTATGTCTAAGCCTTGCAAAGACAATAAAGCAATTGCTCAAGTAGGTACTATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b12829 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       ::::: :: :::::::: :::::: :::: ::::::   :::::::: ::::: ::::::
b34530 GCTAACTCTGATGAAGCAATTGGTTCTATTATTGCTAGTGCAATGGATAAAGTAGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12829 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       :: ::::::::::: :::::::: ::::::::: : ::::::::  : ::::::::::::
b34530 GAAGGTGTTATTACTGTTGAAGACGGTAATGGACTTGAAAATGAATTATCTGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12829 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
       :::::::: :::::::: ::::: ::::::::::::::::::::::: :: :::::::::
b34530 GGTATGCAGTTTGATCGTGGTTATATTTCTCCATACTTCATCAACAATCAACAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12829 AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
       :  ::::: :::::::::::::::::: : ::::::::::: ::: : ::::::::::::
b34530 ACTTGTGAGCTTGAGCATCCATTCATTCTGTTGGTTGACAAGAAAATCTCCAGTATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12829 GAAATGTTGTCCGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCTTTATTGATCATCGCA
       :: :::::::: ::::::::::: ::::::::::: :::::::: :::::::: ::::: 
b34530 GACATGTTGTCTGTATTGGAAGGCGTTGCAAAATCAGGCCGTCCATTATTGATTATCGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b12829 GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
       :::::::::::::::::::::::::: ::::: :: :: ::::::::::: :::::::: 
b34530 GAAGATGTTGAAGGCGAAGCTTTAGCAACTCTAGTTGTAAACAACATGCGTGGTATTGTT
              490       500       510       520       530       540

              550     
b12829 AAAGTATGTGCTGTC
       :::::::: :: :: 
b34530 AAAGTATGCGCAGTT
              550     

</pre>
<hr>
<p><pre>


555 residues in 1 query   sequences
10433008 residues in 18820 library sequences
 Scomplib [35.03]
 start: Mon Jul 22 02:12:06 2024 done: Mon Jul 22 02:12:09 2024
 Total Scan time:  2.440 Total Display time:  0.010

Function used was FASTA [version 35.03 Feb. 18, 2008]
</pre>