/var/www/html/cpndb/fasta_results/b12785.fasta# /data/www/cpndb/fasta35 -E 200 -Q -m 6 -b 20 -d 20 -z 2 -H /data/www/cpndb/fasta_results/b12785 /data/www/cpndb/blastDBs/reference_a_nut
<pre>
FASTA searches a protein or DNA sequence data bank
 version 35.03 Feb. 18, 2008
Please cite:
 W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

</pre>
Query: /data/www/cpndb/fasta_results/b12785
<pre>
  1>>>b12785 555 nt - 555 nt
Library: /data/www/cpndb/blastDBs/reference_a_nut 10433008 residues in 18820 sequences

10433008 residues in 18820 sequences
Statistics: MLE_cen statistics: Lambda= 0.0027;  K=1.799e-05 (cen=941)
Algorithm: FASTA (3.5 Sept 2006) [optimized]
Parameters: +5/-4 matrix (5:-4) ktup: 6
 join: 51, opt: 36, open/ext: -12/-4, width:  16
 Scan time:  2.340
</pre>
<p>
<hr>
<p>
<p><pre>

The best scores are:                                      opt bits E(18820)
<a onClick="window.open('getRecord.php?id=b6863',
                                'cpndb_record'); return false;" href="getRecord.php?id=b6863" target=_"blank">b6863</a> NC_002942 Legionella pneumophila subsp.  ( 555) [f] 2604 26.0      88 <A HREF="#b6863">align</A>
<a onClick="window.open('getRecord.php?id=b27730',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27730" target=_"blank">b27730</a> NC_018140 Legionella  pneumophila  subs ( 555) [f] 2595 25.9      90 <A HREF="#b27730">align</A>
<a onClick="window.open('getRecord.php?id=b27843',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27843" target=_"blank">b27843</a> AVOV01000008 Legionella  pneumophila  s ( 555) [f] 2586 25.9      93 <A HREF="#b27843">align</A>
<a onClick="window.open('getRecord.php?id=b27731',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27731" target=_"blank">b27731</a> NC_018139 Legionella  pneumophila  subs ( 555) [f] 2586 25.9      93 <A HREF="#b27731">align</A>
<a onClick="window.open('getRecord.php?id=b6873',
                                'cpndb_record'); return false;" href="getRecord.php?id=b6873" target=_"blank">b6873</a> NC_006368 Legionella pneumophila Paris   ( 555) [f] 2586 25.9      93 <A HREF="#b6873">align</A>
<a onClick="window.open('getRecord.php?id=b27844',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27844" target=_"blank">b27844</a> AVOW01000055 Legionella  pneumophila  s ( 555) [f] 2586 25.9      93 <A HREF="#b27844">align</A>
<a onClick="window.open('getRecord.php?id=b20453',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20453" target=_"blank">b20453</a> CP003192 Legionella pneumophila subsp.  ( 555) [f] 2577 25.9      95 <A HREF="#b20453">align</A>
<a onClick="window.open('getRecord.php?id=b10196',
                                'cpndb_record'); return false;" href="getRecord.php?id=b10196" target=_"blank">b10196</a> NC_009494 Legionella pneumophila str. C ( 555) [f] 2577 25.9      95 <A HREF="#b10196">align</A>
<a onClick="window.open('getRecord.php?id=b20514',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20514" target=_"blank">b20514</a> NC_016811 Legionella pneumophila subsp. ( 555) [f] 2577 25.9      95 <A HREF="#b20514">align</A>
<a onClick="window.open('getRecord.php?id=b6872',
                                'cpndb_record'); return false;" href="getRecord.php?id=b6872" target=_"blank">b6872</a> NC_006369 Legionella pneumophila Lens    ( 555) [f] 2577 25.9      95 <A HREF="#b6872">align</A>
<a onClick="window.open('getRecord.php?id=v71',
                                'cpndb_record'); return false;" href="getRecord.php?id=v71" target=_"blank">v71</a> 660 Legionella pneumophila                 ( 555) [f] 2577 25.9      95 <A HREF="#v71">align</A>
<a onClick="window.open('getRecord.php?id=b120',
                                'cpndb_record'); return false;" href="getRecord.php?id=b120" target=_"blank">b120</a> M31918 Legionella pneumophila SVir        ( 555) [f] 2568 25.8      97 <A HREF="#b120">align</A>
<a onClick="window.open('getRecord.php?id=b34829',
                                'cpndb_record'); return false;" href="getRecord.php?id=b34829" target=_"blank">b34829</a> NZ_CAAAIM010000011 Legionella  rowbotha ( 555) [f] 2113 24.0 3.3e+02 <A HREF="#b34829">align</A>
<a onClick="window.open('getRecord.php?id=b34824',
                                'cpndb_record'); return false;" href="getRecord.php?id=b34824" target=_"blank">b34824</a> NZ_CAAAJG010000017 Legionella  moravica ( 555) [f] 2086 23.9 3.6e+02 <A HREF="#b34824">align</A>
<a onClick="window.open('getRecord.php?id=b34826',
                                'cpndb_record'); return false;" href="getRecord.php?id=b34826" target=_"blank">b34826</a> NZ_CAAAIQ010000012 Legionella  waltersi ( 555) [f] 2077 23.9 3.7e+02 <A HREF="#b34826">align</A>
<a onClick="window.open('getRecord.php?id=b33760',
                                'cpndb_record'); return false;" href="getRecord.php?id=b33760" target=_"blank">b33760</a> NZ_UGPA01000001 Legionella  worsleiensi ( 555) [f] 2068 23.9 3.7e+02 <A HREF="#b33760">align</A>
<a onClick="window.open('getRecord.php?id=b33755',
                                'cpndb_record'); return false;" href="getRecord.php?id=b33755" target=_"blank">b33755</a> NZ_UGOW01000001 Legionella quateirensis ( 555) [f] 2068 23.9 3.7e+02 <A HREF="#b33755">align</A>
<a onClick="window.open('getRecord.php?id=b34825',
                                'cpndb_record'); return false;" href="getRecord.php?id=b34825" target=_"blank">b34825</a> NZ_CAAAIL010000001 Legionella  quateire ( 555) [f] 2068 23.9 3.7e+02 <A HREF="#b34825">align</A>
<a onClick="window.open('getRecord.php?id=b34832',
                                'cpndb_record'); return false;" href="getRecord.php?id=b34832" target=_"blank">b34832</a> NZ_CAAAIH010000002 Legionella  santicru ( 555) [f] 2005 23.6 4.4e+02 <A HREF="#b34832">align</A>
<a onClick="window.open('getRecord.php?id=b15810',
                                'cpndb_record'); return false;" href="getRecord.php?id=b15810" target=_"blank">b15810</a> NZ_ACZG01000001 Legionella longbeachae  ( 555) [f] 1996 23.6 4.5e+02 <A HREF="#b15810">align</A>
</pre><p><hr><p>

>>>b12785, 555 nt vs /data/www/cpndb/blastDBs/reference_a_nut library

<A name=b6863>
<pre>
>><a onClick="window.open('getRecord.php?id=b6863',
                                'cpndb_record'); return false;" href="getRecord.php?id=b6863" target=_"blank">b6863</a> NC_002942 Legionella pneumophila subsp. pneumoph  (555 nt)
 initn: 2604 init1: 2604 opt: 2604  Z-score: 87.3  bits: 26.0 E():   88
banded Smith-Waterman score: 2604; 96.6% identity (96.6% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b12785 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAGGCAGTTGCTGCTGGAATG
       ::::::::::::::::::::::::::::::::::::::::: :::::::::::::: :::
b6863  GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12785 AACCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTGGCAGTTACTAAAAAATTA
       :: :::::::::::::::::::::::::::::::::::::: :::::::: :::::::::
b6863  AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b12785 CAAGCCATGTCCAAGCCATGCAAAGACAGCAAGGCTATTGCTCAAGTTGGAACGATTTCT
       ::::: ::::: :::::::::::::::::::: :::::::::::::::::::: ::::::
b6863  CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b12785 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b6863  GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12785 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b6863  GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12785 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAACAAAACATG
       :::::::::::::::::::::::::::::::::::::: ::::::::::: :::::::::
b6863  GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTTATCAACAACCAGCAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12785 AGCTGCGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGCATTCGT
       ::::: ::::::::::::::::::::::::::::::::::::::::::::::: ::::::
b6863  AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12785 GAAATGTTGTCAGTACTTGAGGGTGTTGCCAAATCTGGACGTCCTTTATTGATCATTGCA
       ::::::::::: ::: : :: ::::::::::::::::: :::::::::::::::::::::
b6863  GAAATGTTGTCCGTATTGGAAGGTGTTGCCAAATCTGGTCGTCCTTTATTGATCATTGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b12785 GAAGATGTTGAAGGCGAAGCGTTAGCTACTCTGGTAGTCAACAACATGCGCGGTATTGTA
       :::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::
b6863  GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTCAACAACATGCGCGGTATTGTA
              490       500       510       520       530       540

              550     
b12785 AAAGTATGTGCTGTC
       :::::::::::::::
b6863  AAAGTATGTGCTGTC
              550     

</pre>
<hr>
<A name=b27730>
<pre>
>><a onClick="window.open('getRecord.php?id=b27730',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27730" target=_"blank">b27730</a> NC_018140 Legionella  pneumophila  subsp. pneum  (555 nt)
 initn: 2595 init1: 2595 opt: 2595  Z-score: 87.1  bits: 25.9 E():   90
banded Smith-Waterman score: 2595; 96.4% identity (96.4% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b12785 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAGGCAGTTGCTGCTGGAATG
       ::::::::::::::::::::::::::::::::::::::::: :::::::::::::: :::
b27730 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12785 AACCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTGGCAGTTACTAAAAAATTA
       :: :::::::::::::::::::::::::::::::::::::: :::::::: :::::::::
b27730 AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b12785 CAAGCCATGTCCAAGCCATGCAAAGACAGCAAGGCTATTGCTCAAGTTGGAACGATTTCT
       ::::: ::::: :::::::::::::::::::: :::::::::::::::::::: ::::::
b27730 CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b12785 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27730 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12785 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27730 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12785 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAACAAAACATG
       :::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::
b27730 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12785 AGCTGCGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGCATTCGT
       ::::: ::::::::::::::::::::::::::::::::::::::::::::::: ::::::
b27730 AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12785 GAAATGTTGTCAGTACTTGAGGGTGTTGCCAAATCTGGACGTCCTTTATTGATCATTGCA
       ::::::::::: ::: : :: :::::::: :::::::: ::::::::::::::::: :::
b27730 GAAATGTTGTCCGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCTTTATTGATCATCGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b12785 GAAGATGTTGAAGGCGAAGCGTTAGCTACTCTGGTAGTCAACAACATGCGCGGTATTGTA
       :::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::
b27730 GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTCAACAACATGCGCGGTATTGTA
              490       500       510       520       530       540

              550     
b12785 AAAGTATGTGCTGTC
       :::::::::::::::
b27730 AAAGTATGTGCTGTC
              550     

</pre>
<hr>
<A name=b27843>
<pre>
>><a onClick="window.open('getRecord.php?id=b27843',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27843" target=_"blank">b27843</a> AVOV01000008 Legionella  pneumophila  str. Leg0  (555 nt)
 initn: 2586 init1: 2586 opt: 2586  Z-score: 86.9  bits: 25.9 E():   93
banded Smith-Waterman score: 2586; 96.2% identity (96.2% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b12785 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAGGCAGTTGCTGCTGGAATG
       ::::::::::::::::::::::::::::::::::::::::: :::::::::::::: :::
b27843 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12785 AACCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTGGCAGTTACTAAAAAATTA
       :: :::::::::::::::::::::::::::::::::::::: :::::::: :::::::::
b27843 AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b12785 CAAGCCATGTCCAAGCCATGCAAAGACAGCAAGGCTATTGCTCAAGTTGGAACGATTTCT
       ::::: ::::: :::::::::::::::::::: :::::::::::::::::::: ::::::
b27843 CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b12785 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27843 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12785 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27843 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12785 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAACAAAACATG
       :::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::
b27843 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12785 AGCTGCGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGCATTCGT
       ::::: ::::::::::::::::::::::::::::::::::::::::::::::: ::::::
b27843 AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12785 GAAATGTTGTCAGTACTTGAGGGTGTTGCCAAATCTGGACGTCCTTTATTGATCATTGCA
       ::::::::::: ::: : :: :::::::: :::::::: ::::::::::::::::: :::
b27843 GAAATGTTGTCCGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCTTTATTGATCATCGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b12785 GAAGATGTTGAAGGCGAAGCGTTAGCTACTCTGGTAGTCAACAACATGCGCGGTATTGTA
       :::::::::::::::::::: ::::::::::::::::: :::::::::::::::::::::
b27843 GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
              490       500       510       520       530       540

              550     
b12785 AAAGTATGTGCTGTC
       :::::::::::::::
b27843 AAAGTATGTGCTGTC
              550     

</pre>
<hr>
<A name=b27731>
<pre>
>><a onClick="window.open('getRecord.php?id=b27731',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27731" target=_"blank">b27731</a> NC_018139 Legionella  pneumophila  subsp. pneum  (555 nt)
 initn: 2586 init1: 2586 opt: 2586  Z-score: 86.9  bits: 25.9 E():   93
banded Smith-Waterman score: 2586; 96.2% identity (96.2% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b12785 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAGGCAGTTGCTGCTGGAATG
       ::::::::::::::::::::::::::::::::::::::::: :::::::::::::: :::
b27731 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12785 AACCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTGGCAGTTACTAAAAAATTA
       :: :::::::::::::::::::::::::::::::::::::: :::::::: :::::::::
b27731 AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b12785 CAAGCCATGTCCAAGCCATGCAAAGACAGCAAGGCTATTGCTCAAGTTGGAACGATTTCT
       ::::: ::::: :::::::::::::::::::: :::::::::::::::::::: ::::::
b27731 CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b12785 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27731 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12785 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27731 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12785 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAACAAAACATG
       :::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::
b27731 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12785 AGCTGCGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGCATTCGT
       ::::: ::::::::::::::::::::::::::::::::::::::::::::::: ::::::
b27731 AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12785 GAAATGTTGTCAGTACTTGAGGGTGTTGCCAAATCTGGACGTCCTTTATTGATCATTGCA
       ::::::::::: ::: : :: :::::::: :::::::: ::::::::::::::::: :::
b27731 GAAATGTTGTCCGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCTTTATTGATCATCGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b12785 GAAGATGTTGAAGGCGAAGCGTTAGCTACTCTGGTAGTCAACAACATGCGCGGTATTGTA
       :::::::::::::::::::: ::::::::::::::::: :::::::::::::::::::::
b27731 GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
              490       500       510       520       530       540

              550     
b12785 AAAGTATGTGCTGTC
       :::::::::::::::
b27731 AAAGTATGTGCTGTC
              550     

</pre>
<hr>
<A name=b6873>
<pre>
>><a onClick="window.open('getRecord.php?id=b6873',
                                'cpndb_record'); return false;" href="getRecord.php?id=b6873" target=_"blank">b6873</a> NC_006368 Legionella pneumophila Paris            (555 nt)
 initn: 2586 init1: 2586 opt: 2586  Z-score: 86.9  bits: 25.9 E():   93
banded Smith-Waterman score: 2586; 96.2% identity (96.2% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b12785 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAGGCAGTTGCTGCTGGAATG
       ::::::::::::::::::::::::::::::::::::::::: :::::::::::::: :::
b6873  GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12785 AACCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTGGCAGTTACTAAAAAATTA
       :: :::::::::::::::::::::::::::::::::::::: :::::::: :::::::::
b6873  AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b12785 CAAGCCATGTCCAAGCCATGCAAAGACAGCAAGGCTATTGCTCAAGTTGGAACGATTTCT
       ::::: ::::: :::::::::::::::::::: :::::::::::::::::::: ::::::
b6873  CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b12785 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b6873  GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12785 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b6873  GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12785 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAACAAAACATG
       :::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::
b6873  GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12785 AGCTGCGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGCATTCGT
       ::::: ::::::::::::::::::::::::::::::::::::::::::::::: ::::::
b6873  AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12785 GAAATGTTGTCAGTACTTGAGGGTGTTGCCAAATCTGGACGTCCTTTATTGATCATTGCA
       ::::::::::: ::: : :: :::::::: :::::::: ::::::::::::::::: :::
b6873  GAAATGTTGTCCGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCTTTATTGATCATCGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b12785 GAAGATGTTGAAGGCGAAGCGTTAGCTACTCTGGTAGTCAACAACATGCGCGGTATTGTA
       :::::::::::::::::::: ::::::::::::::::: :::::::::::::::::::::
b6873  GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
              490       500       510       520       530       540

              550     
b12785 AAAGTATGTGCTGTC
       :::::::::::::::
b6873  AAAGTATGTGCTGTC
              550     

</pre>
<hr>
<A name=b27844>
<pre>
>><a onClick="window.open('getRecord.php?id=b27844',
                                'cpndb_record'); return false;" href="getRecord.php?id=b27844" target=_"blank">b27844</a> AVOW01000055 Legionella  pneumophila  str. Leg0  (555 nt)
 initn: 2586 init1: 2586 opt: 2586  Z-score: 86.9  bits: 25.9 E():   93
banded Smith-Waterman score: 2586; 96.2% identity (96.2% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b12785 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAGGCAGTTGCTGCTGGAATG
       ::::::::::::::::::::::::::::::::::::::::: :::::::::::::: :::
b27844 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12785 AACCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTGGCAGTTACTAAAAAATTA
       :: :::::::::::::::::::::::::::::::::::::: :::::::: :::::::::
b27844 AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b12785 CAAGCCATGTCCAAGCCATGCAAAGACAGCAAGGCTATTGCTCAAGTTGGAACGATTTCT
       ::::: ::::: :::::::::::::::::::: :::::::::::::::::::: ::::::
b27844 CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b12785 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27844 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12785 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b27844 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12785 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAACAAAACATG
       :::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::
b27844 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12785 AGCTGCGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGCATTCGT
       ::::: ::::::::::::::::::::::::::::::::::::::::::::::: ::::::
b27844 AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12785 GAAATGTTGTCAGTACTTGAGGGTGTTGCCAAATCTGGACGTCCTTTATTGATCATTGCA
       ::::::::::: ::: : :: :::::::: :::::::: ::::::::::::::::: :::
b27844 GAAATGTTGTCCGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCTTTATTGATCATCGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b12785 GAAGATGTTGAAGGCGAAGCGTTAGCTACTCTGGTAGTCAACAACATGCGCGGTATTGTA
       :::::::::::::::::::: ::::::::::::::::: :::::::::::::::::::::
b27844 GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
              490       500       510       520       530       540

              550     
b12785 AAAGTATGTGCTGTC
       :::::::::::::::
b27844 AAAGTATGTGCTGTC
              550     

</pre>
<hr>
<A name=b20453>
<pre>
>><a onClick="window.open('getRecord.php?id=b20453',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20453" target=_"blank">b20453</a> CP003192 Legionella pneumophila subsp. pneumoph  (555 nt)
 initn: 2577 init1: 2577 opt: 2577  Z-score: 86.7  bits: 25.9 E():   95
banded Smith-Waterman score: 2577; 96.0% identity (96.0% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b12785 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAGGCAGTTGCTGCTGGAATG
       ::::::::::::::::::::::::::::::::::::::::: :::::::::::::: :::
b20453 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12785 AACCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTGGCAGTTACTAAAAAATTA
       :: :::::::::::::::::::::::::::::::::::::: :::::::: :::::::::
b20453 AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b12785 CAAGCCATGTCCAAGCCATGCAAAGACAGCAAGGCTATTGCTCAAGTTGGAACGATTTCT
       ::::: ::::: :::::::::::::::::::: :::::::::::::::::::: ::::::
b20453 CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b12785 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20453 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12785 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20453 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12785 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAACAAAACATG
       :::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::
b20453 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12785 AGCTGCGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGCATTCGT
       ::::: ::::::::::::::::::::::::::::::::::::::::::::::: ::::::
b20453 AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12785 GAAATGTTGTCAGTACTTGAGGGTGTTGCCAAATCTGGACGTCCTTTATTGATCATTGCA
       ::::::::::: ::: : :: :::::::: :::::::: ::::::::::::::::: :::
b20453 GAAATGTTGTCCGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCTTTATTGATCATCGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b12785 GAAGATGTTGAAGGCGAAGCGTTAGCTACTCTGGTAGTCAACAACATGCGCGGTATTGTA
       :::::::::::::::::::: ::::::::::::::::: :::::::::::::::::::::
b20453 GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
              490       500       510       520       530       540

              550     
b12785 AAAGTATGTGCTGTC
       ::: :::::::::::
b20453 AAAATATGTGCTGTC
              550     

</pre>
<hr>
<A name=b10196>
<pre>
>><a onClick="window.open('getRecord.php?id=b10196',
                                'cpndb_record'); return false;" href="getRecord.php?id=b10196" target=_"blank">b10196</a> NC_009494 Legionella pneumophila str. Corby      (555 nt)
 initn: 2577 init1: 2577 opt: 2577  Z-score: 86.7  bits: 25.9 E():   95
banded Smith-Waterman score: 2577; 96.0% identity (96.0% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b12785 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAGGCAGTTGCTGCTGGAATG
       ::::::::::::::::::::::::::::::::::::::::: :::::::::::::: :::
b10196 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12785 AACCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTGGCAGTTACTAAAAAATTA
       :: :::::::::::::::::::::::::::::::::::::: :::::::: :::::::::
b10196 AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b12785 CAAGCCATGTCCAAGCCATGCAAAGACAGCAAGGCTATTGCTCAAGTTGGAACGATTTCT
       ::::: ::::: :::::::::::::::::::: :::::::::::::::::::: ::::::
b10196 CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b12785 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       :::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::
b10196 GCTAATTCTGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12785 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b10196 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12785 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAACAAAACATG
       :::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::
b10196 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12785 AGCTGCGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGCATTCGT
       ::::: ::::::::::::::::::::::::::::::::::::::::::::::: ::::::
b10196 AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12785 GAAATGTTGTCAGTACTTGAGGGTGTTGCCAAATCTGGACGTCCTTTATTGATCATTGCA
       ::::::::::: ::: : :: :::::::: :::::::: ::::::::::::::::: :::
b10196 GAAATGTTGTCCGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCTTTATTGATCATCGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b12785 GAAGATGTTGAAGGCGAAGCGTTAGCTACTCTGGTAGTCAACAACATGCGCGGTATTGTA
       :::::::::::::::::::: ::::::::::::::::: :::::::::::::::::::::
b10196 GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
              490       500       510       520       530       540

              550     
b12785 AAAGTATGTGCTGTC
       :::::::::::::::
b10196 AAAGTATGTGCTGTC
              550     

</pre>
<hr>
<A name=b20514>
<pre>
>><a onClick="window.open('getRecord.php?id=b20514',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20514" target=_"blank">b20514</a> NC_016811 Legionella pneumophila subsp. pneumop  (555 nt)
 initn: 2577 init1: 2577 opt: 2577  Z-score: 86.7  bits: 25.9 E():   95
banded Smith-Waterman score: 2577; 96.0% identity (96.0% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b12785 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAGGCAGTTGCTGCTGGAATG
       ::::::::::::::::::::::::::::::::::::::::: :::::::::::::: :::
b20514 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12785 AACCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTGGCAGTTACTAAAAAATTA
       :: :::::::::::::::::::::::::::::::::::::: :::::::: :::::::::
b20514 AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b12785 CAAGCCATGTCCAAGCCATGCAAAGACAGCAAGGCTATTGCTCAAGTTGGAACGATTTCT
       ::::: ::::: :::::::::::::::::::: :::::::::::::::::::: ::::::
b20514 CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b12785 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20514 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12785 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20514 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12785 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAACAAAACATG
       :::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::
b20514 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12785 AGCTGCGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGCATTCGT
       ::::: ::::::::::::::::::::::::::::::::::::::::::::::: ::::::
b20514 AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12785 GAAATGTTGTCAGTACTTGAGGGTGTTGCCAAATCTGGACGTCCTTTATTGATCATTGCA
       ::::::::::: ::: : :: :::::::: :::::::: ::::::::::::::::: :::
b20514 GAAATGTTGTCCGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCTTTATTGATCATCGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b12785 GAAGATGTTGAAGGCGAAGCGTTAGCTACTCTGGTAGTCAACAACATGCGCGGTATTGTA
       :::::::::::::::::::: ::::::::::::::::: :::::::::::::::::::::
b20514 GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
              490       500       510       520       530       540

              550     
b12785 AAAGTATGTGCTGTC
       ::: :::::::::::
b20514 AAAATATGTGCTGTC
              550     

</pre>
<hr>
<A name=b6872>
<pre>
>><a onClick="window.open('getRecord.php?id=b6872',
                                'cpndb_record'); return false;" href="getRecord.php?id=b6872" target=_"blank">b6872</a> NC_006369 Legionella pneumophila Lens             (555 nt)
 initn: 2577 init1: 2577 opt: 2577  Z-score: 86.7  bits: 25.9 E():   95
banded Smith-Waterman score: 2577; 96.0% identity (96.0% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b12785 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAGGCAGTTGCTGCTGGAATG
       ::::::::::::::::::::::::::::::::::::::::: ::::::::::: :: :::
b6872  GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCCGGTATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12785 AACCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTGGCAGTTACTAAAAAATTA
       :: ::::::::::::::::::::::::::::::::::::::::::::::: :::::::::
b6872  AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTGGCAGTTACCAAAAAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b12785 CAAGCCATGTCCAAGCCATGCAAAGACAGCAAGGCTATTGCTCAAGTTGGAACGATTTCT
       ::::: ::::: :::::::::::::::::::: :::::::::::::::::::: ::::::
b6872  CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b12785 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b6872  GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12785 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       ::::::::::: :: :::::::::::::::::::::::::::::::::::::::::::::
b6872  GAGGGTGTTATCACTGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12785 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAACAAAACATG
       :::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::
b6872  GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12785 AGCTGCGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGCATTCGT
       ::::: ::::::::::::::::::::::::::::::::::::::::::::::: ::::::
b6872  AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12785 GAAATGTTGTCAGTACTTGAGGGTGTTGCCAAATCTGGACGTCCTTTATTGATCATTGCA
       ::::::::::: ::: : :: :::::::::::::::::::::::::::::::: :: :::
b6872  GAAATGTTGTCCGTATTAGAAGGTGTTGCCAAATCTGGACGTCCTTTATTGATTATCGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b12785 GAAGATGTTGAAGGCGAAGCGTTAGCTACTCTGGTAGTCAACAACATGCGCGGTATTGTA
       :::::::::::::::::::: ::::::::::::::::: :::::::::::::::::::::
b6872  GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
              490       500       510       520       530       540

              550     
b12785 AAAGTATGTGCTGTC
       :::::::::::::::
b6872  AAAGTATGTGCTGTC
              550     

</pre>
<hr>
<A name=v71>
<pre>
>><a onClick="window.open('getRecord.php?id=v71',
                                'cpndb_record'); return false;" href="getRecord.php?id=v71" target=_"blank">v71</a> 660 Legionella pneumophila                          (555 nt)
 initn: 2577 init1: 2577 opt: 2577  Z-score: 86.7  bits: 25.9 E():   95
banded Smith-Waterman score: 2577; 96.0% identity (96.0% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b12785 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAGGCAGTTGCTGCTGGAATG
       ::::::::::::::::::::::::::::::::::::::::: ::::::::::: :: :::
v71    GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCCGGTATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12785 AACCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTGGCAGTTACTAAAAAATTA
       :: ::::::::::::::::::::::::::::::::::::::::::::::: :::::::::
v71    AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTGGCAGTTACCAAAAAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b12785 CAAGCCATGTCCAAGCCATGCAAAGACAGCAAGGCTATTGCTCAAGTTGGAACGATTTCT
       ::::: ::::: :::::::::::::::::::: :::::::::::::::::::: ::::::
v71    CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCTATTGCTCAAGTTGGAACTATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b12785 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
v71    GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12785 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       ::::::::::: :: :::::::::::::::::::::::::::::::::::::::::::::
v71    GAGGGTGTTATCACTGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12785 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAACAAAACATG
       :::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::
v71    GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12785 AGCTGCGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGCATTCGT
       ::::: ::::::::::::::::::::::::::::::::::::::::::::::: ::::::
v71    AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12785 GAAATGTTGTCAGTACTTGAGGGTGTTGCCAAATCTGGACGTCCTTTATTGATCATTGCA
       ::::::::::: ::: : :: :::::::::::::::::::::::::::::::: :: :::
v71    GAAATGTTGTCCGTATTAGAAGGTGTTGCCAAATCTGGACGTCCTTTATTGATTATCGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b12785 GAAGATGTTGAAGGCGAAGCGTTAGCTACTCTGGTAGTCAACAACATGCGCGGTATTGTA
       :::::::::::::::::::: ::::::::::::::::: :::::::::::::::::::::
v71    GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTTAACAACATGCGCGGTATTGTA
              490       500       510       520       530       540

              550     
b12785 AAAGTATGTGCTGTC
       :::::::::::::::
v71    AAAGTATGTGCTGTC
              550     

</pre>
<hr>
<A name=b120>
<pre>
>><a onClick="window.open('getRecord.php?id=b120',
                                'cpndb_record'); return false;" href="getRecord.php?id=b120" target=_"blank">b120</a> M31918 Legionella pneumophila SVir                 (555 nt)
 initn: 2568 init1: 2568 opt: 2568  Z-score: 86.5  bits: 25.8 E():   97
banded Smith-Waterman score: 2568; 95.9% identity (95.9% similar) in 555 nt overlap (1-555:1-555)
<p>

               10        20        30        40        50        60
b12785 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAGGCAGTTGCTGCTGGAATG
       ::::::::::::::::::::::::::::::::::::::::: :::::::::::::: :::
b120   GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAAGCAGTTGCTGCTGGTATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12785 AACCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTGGCAGTTACTAAAAAATTA
       :: :::::::::::::::::::::::::::::::::::::: :::::::: :::::::::
b120   AATCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTAGCAGTTACCAAAAAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b12785 CAAGCCATGTCCAAGCCATGCAAAGACAGCAAGGCTATTGCTCAAGTTGGAACGATTTCT
       ::::: ::::: :::::::::::::::::::: :: ::::::::::::::::: ::::::
b120   CAAGCTATGTCTAAGCCATGCAAAGACAGCAAAGCCATTGCTCAAGTTGGAACTATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b12785 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b120   GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12785 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::
b120   GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTATGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12785 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAACAAAACATG
       :::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::
b120   GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12785 AGCTGCGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGCATTCGT
       ::::: ::::::::::::::::::::::::::::::::::::::::::::::: ::::::
b120   AGCTGTGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGTATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12785 GAAATGTTGTCAGTACTTGAGGGTGTTGCCAAATCTGGACGTCCTTTATTGATCATTGCA
       ::::::::::: ::: : :: :::::::: :::::::: :::::::: :::::::: :::
b120   GAAATGTTGTCCGTATTGGAAGGTGTTGCTAAATCTGGCCGTCCTTTGTTGATCATCGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b12785 GAAGATGTTGAAGGCGAAGCGTTAGCTACTCTGGTAGTCAACAACATGCGCGGTATTGTA
       :::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::
b120   GAAGATGTTGAAGGCGAAGCTTTAGCTACTCTGGTAGTCAACAACATGCGCGGTATTGTA
              490       500       510       520       530       540

              550     
b12785 AAAGTATGTGCTGTC
       :::::::::::::::
b120   AAAGTATGTGCTGTC
              550     

</pre>
<hr>
<A name=b34829>
<pre>
>><a onClick="window.open('getRecord.php?id=b34829',
                                'cpndb_record'); return false;" href="getRecord.php?id=b34829" target=_"blank">b34829</a> NZ_CAAAIM010000011 Legionella  rowbothamii  LLA  (555 nt)
 initn: 2059 init1: 2059 opt: 2113  Z-score: 76.9  bits: 24.0 E(): 3.3e+02
banded Smith-Waterman score: 2113; 86.8% identity (86.8% similar) in 554 nt overlap (1-554:1-554)
<p>

               10        20        30        40        50        60
b12785 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAGGCAGTTGCTGCTGGAATG
       :: :: ::::: ::::: :::::::::::::::::: :::: :::::::::::::: :::
b34829 GCTACTGTATTAGCTCGCTCTATTCTTGTTGAAGGTAACAAAGCAGTTGCTGCTGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12785 AACCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTGGCAGTTACTAAAAAATTA
       ::::: :::::::: :::::::::::::::::::: ::  ::::::::::::: ::::::
b34829 AACCCCATGGATCTGAAACGCGGTATTGATAAAGCGGTTCTGGCAGTTACTAAGAAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b12785 CAAGCCATGTCCAAGCCATGCAAAGACAGCAAGGCTATTGCTCAAGTTGGAACGATTTCT
       ::: : ::::: :::::::::::::::: ::: :: :: ::::::::::: :: ::::::
b34829 CAATCTATGTCTAAGCCATGCAAAGACAACAAAGCAATCGCTCAAGTTGGTACTATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b12785 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       ::::: :: :: ::::: :::::: :::::::::::   :: ::::::::::::::::::
b34829 GCTAACTCTGACGAAGCAATTGGTTCTATCATTGCTAGCGCTATGGAAAAAGTTGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12785 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       :: :::::::: :: :: ::::::::::::::::: :: :::::  : :: :::::::::
b34829 GAAGGTGTTATCACTGTCGAAGATGGTAATGGATTAGAGAATGAATTATCAGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12785 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAACAAAACATG
       ::::::::::::::::: :: :::::::::::::::::::::::::::::::::::::::
b34829 GGTATGCAATTTGATCGTGGATACATTTCTCCATACTTCATCAACAACCAACAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12785 AGCTGCGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGCATTCGT
       ::::::::: : ::::: ::::::::: : :: :::::::: ::: : :: ::::: :::
b34829 AGCTGCGAATTAGAGCACCCATTCATTCTGTTAGTTGACAAGAAAATCTCTAGCATCCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12785 GAAATGTTGTCAGTACTTGAGGGTGTTGCCAAATCTGGACGTCCTTTATTGATCATTGCA
       :: ::::: :: ::: : :: :::::::: :::::::: ::::: :::::::: :: :: 
b34829 GATATGTTATCTGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCATTATTGATTATCGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b12785 GAAGATGTTGAAGGCGAAGCGTTAGCTACTCTGGTAGTCAACAACATGCGCGGTATTGTA
       :::::::::::::: ::::: ::::::::::: :: :: ::::::::::: :::::::: 
b34829 GAAGATGTTGAAGGTGAAGCTTTAGCTACTCTAGTTGTTAACAACATGCGTGGTATTGTT
              490       500       510       520       530       540

              550     
b12785 AAAGTATGTGCTGTC
       :::::::::::::: 
b34829 AAAGTATGTGCTGTT
              550     

</pre>
<hr>
<A name=b34824>
<pre>
>><a onClick="window.open('getRecord.php?id=b34824',
                                'cpndb_record'); return false;" href="getRecord.php?id=b34824" target=_"blank">b34824</a> NZ_CAAAJG010000017 Legionella  moravica  316-86  (555 nt)
 initn: 2056 init1: 2056 opt: 2086  Z-score: 76.3  bits: 23.9 E(): 3.6e+02
banded Smith-Waterman score: 2086; 86.3% identity (86.3% similar) in 554 nt overlap (1-554:1-554)
<p>

               10        20        30        40        50        60
b12785 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAGGCAGTTGCTGCTGGAATG
       :: :: :: :: :: ::::::::::::::::::::  : :: :: :::::::: :: :::
b34824 GCTACTGTTTTAGCACGTTCTATTCTTGTTGAAGGAAATAAAGCGGTTGCTGCCGGTATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12785 AACCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTGGCAGTTACTAAAAAATTA
       :: ::::::::::: ::::::::::: :: :::::::::::::: :::::::::: ::::
b34824 AATCCAATGGATCTGAAACGCGGTATAGACAAAGCAGTATTGGCTGTTACTAAAAGATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b12785 CAAGCCATGTCCAAGCCATGCAAAGACAGCAAGGCTATTGCTCAAGTTGGAACGATTTCT
       ::::  ::::::::::: :: ::::: : ::: :: ::::: :::::::: :: ::::: 
b34824 CAAGAGATGTCCAAGCCTTGTAAAGATACCAAAGCAATTGCACAAGTTGGTACTATTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b12785 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       ::::: :: :: ::::: :::::: :::: :::::::::::::::::::: ::::: :::
b34824 GCTAACTCTGACGAAGCTATTGGTTCTATTATTGCTGAAGCAATGGAAAAGGTTGGCAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12785 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       :: :: :: :: :: :::::::: :: :::::  : :: :::::  : ::::::::::::
b34824 GAAGGCGTGATCACTGTTGAAGACGGCAATGGTCTTGAGAATGAATTATCTGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12785 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAACAAAACATG
       :: :::::::::::::::::::::::::::::::::::::::::::: ::::::::::::
b34824 GGAATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAATCAACAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12785 AGCTGCGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGCATTCGT
       :  :: ::::: ::::::::::::::: : :: :::::::: ::::::::::::::::::
b34824 ACTTGTGAACTGGAGCATCCATTCATTCTGTTAGTTGACAAGAAAGTTTCCAGCATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12785 GAAATGTTGTCAGTACTTGAGGGTGTTGCCAAATCTGGACGTCCTTTATTGATCATTGCA
       :: ::::::::::: ::::: :: ::::: ::::: :: :::::::::::::: ::::::
b34824 GACATGTTGTCAGTTCTTGAAGGCGTTGCAAAATCAGGCCGTCCTTTATTGATTATTGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b12785 GAAGATGTTGAAGGCGAAGCGTTAGCTACTCTGGTAGTCAACAACATGCGCGGTATTGTA
       :::::::::::::::::::: :: :: ::::::::::: :: ::::::::::::::::: 
b34824 GAAGATGTTGAAGGCGAAGCTTTGGCAACTCTGGTAGTGAATAACATGCGCGGTATTGTT
              490       500       510       520       530       540

              550     
b12785 AAAGTATGTGCTGTC
       :::::::::::::: 
b34824 AAAGTATGTGCTGTT
              550     

</pre>
<hr>
<A name=b34826>
<pre>
>><a onClick="window.open('getRecord.php?id=b34826',
                                'cpndb_record'); return false;" href="getRecord.php?id=b34826" target=_"blank">b34826</a> NZ_CAAAIQ010000012 Legionella  waltersii  2074-  (555 nt)
 initn: 2065 init1: 2065 opt: 2077  Z-score: 76.1  bits: 23.9 E(): 3.7e+02
banded Smith-Waterman score: 2077; 86.1% identity (86.1% similar) in 554 nt overlap (1-554:1-554)
<p>

               10        20        30        40        50        60
b12785 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAGGCAGTTGCTGCTGGAATG
       :: :: :::::::: ::::::::::::::::::::::: :: :::::::::::::: :::
b34826 GCTACTGTATTGGCACGTTCTATTCTTGTTGAAGGTCATAAAGCAGTTGCTGCTGGTATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12785 AACCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTGGCAGTTACTAAAAAATTA
       :::::::::::::: ::::: ::::: :: ::::::::::: ::::: ::::: ::: : 
b34826 AACCCAATGGATCTAAAACGTGGTATCGACAAAGCAGTATTAGCAGTCACTAAGAAACTG
               70        80        90       100       110       120

              130       140       150       160       170       180
b12785 CAAGCCATGTCCAAGCCATGCAAAGACAGCAAGGCTATTGCTCAAGTTGGAACGATTTCT
       ::: ::::::: :::::::::::::::: ::: :: ::::::::::: :: :: ::::::
b34826 CAATCCATGTCTAAGCCATGCAAAGACAACAAAGCAATTGCTCAAGTGGGCACTATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b12785 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       ::::: :: ::::::::: :::: :: :::::::::::::::::::: ::::: ::::::
b34826 GCTAACTCTGATGAAGCGGTTGGAGCAATCATTGCTGAAGCAATGGAGAAAGTAGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12785 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       :: :: :: ::::: :::::::: ::::::::  : ::::::::  : :: :::::::::
b34826 GAAGGCGTCATTACTGTTGAAGACGGTAATGGTCTTGAAAATGAATTGTCGGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12785 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAACAAAACATG
       :::::::::::::: :: :: :::::::::::::::::::: ::::::::::::::::::
b34826 GGTATGCAATTTGACCGTGGATACATTTCTCCATACTTCATTAACAACCAACAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12785 AGCTGCGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGCATTCGT
          :: :::::::: :: :::::: : ::::::::::: :::::::: :: :::::::::
b34826 TCTTGTGAACTTGAACACCCATTCGTGTTATTGGTTGATAAAAAAGTATCAAGCATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12785 GAAATGTTGTCAGTACTTGAGGGTGTTGCCAAATCTGGACGTCCTTTATTGATCATTGCA
       :: :::::::: ::: : :: :: ::::: :::::::: ::::: :: :::::::: :::
b34826 GAGATGTTGTCTGTATTGGAAGGCGTTGCTAAATCTGGTCGTCCATTGTTGATCATCGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b12785 GAAGATGTTGAAGGCGAAGCGTTAGCTACTCTGGTAGTCAACAACATGCGCGGTATTGTA
       :::::  ::::::::::::: ::::: ::::: :: :: ::::::::::: :::::::: 
b34826 GAAGACATTGAAGGCGAAGCCTTAGCAACTCTAGTTGTTAACAACATGCGTGGTATTGTC
              490       500       510       520       530       540

              550     
b12785 AAAGTATGTGCTGTC
       :::::::::::::: 
b34826 AAAGTATGTGCTGTT
              550     

</pre>
<hr>
<A name=b33760>
<pre>
>><a onClick="window.open('getRecord.php?id=b33760',
                                'cpndb_record'); return false;" href="getRecord.php?id=b33760" target=_"blank">b33760</a> NZ_UGPA01000001 Legionella  worsleiensis  NCTC1  (555 nt)
 initn: 2039 init1: 2039 opt: 2068  Z-score: 75.9  bits: 23.9 E(): 3.7e+02
banded Smith-Waterman score: 2068; 85.9% identity (85.9% similar) in 554 nt overlap (1-554:1-554)
<p>

               10        20        30        40        50        60
b12785 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAGGCAGTTGCTGCTGGAATG
       :: :: ::: :::::::::: ::::::::::::::  ::::::::::::::::::: :::
b33760 GCGACTGTACTGGCTCGTTCCATTCTTGTTGAAGGAAACAAGGCAGTTGCTGCTGGTATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12785 AACCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTGGCAGTTACTAAAAAATTA
       :: :: :::::: : ::::::::::: :: ::::: ::: :::: :: ::::::::::::
b33760 AATCCTATGGATTTAAAACGCGGTATAGACAAAGCGGTACTGGCTGTAACTAAAAAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b12785 CAAGCCATGTCCAAGCCATGCAAAGACAGCAAGGCTATTGCTCAAGTTGGAACGATTTCT
       ::::  ::::::::::::::::::::::  :: :: ::::: :::::::: :::::::: 
b33760 CAAGAAATGTCCAAGCCATGCAAAGACACTAAAGCAATTGCACAAGTTGGTACGATTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b12785 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       :: :: :: :: ::::: :::::: :::: ::::::::::::::::::::::: ::::::
b33760 GCCAACTCTGACGAAGCAATTGGTTCTATTATTGCTGAAGCAATGGAAAAAGTAGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12785 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       :: :: ::::::::::::::::: :: :::::  : :::::::: :: ::::::::::::
b33760 GAAGGCGTTATTACCGTTGAAGACGGCAATGGTCTTGAAAATGAACTGTCTGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12785 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAACAAAACATG
       :: :::::::::::::: :: ::::::::::::::::::::::::::::: :::::::::
b33760 GGAATGCAATTTGATCGTGGATACATTTCTCCATACTTCATCAACAACCAGCAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12785 AGCTGCGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGCATTCGT
       : ::: ::::: :: :::::::::::  : :: :::::::: ::: ::::::: :: :::
b33760 ACCTGTGAACTGGAACATCCATTCATCCTGTTAGTTGACAAGAAAATTTCCAGTATCCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12785 GAAATGTTGTCAGTACTTGAGGGTGTTGCCAAATCTGGACGTCCTTTATTGATCATTGCA
       :: ::: :::: :: :: :: :::::::::::::: :: :::::::: ::::: :: :: 
b33760 GACATGCTGTCTGTTCTGGAAGGTGTTGCCAAATCCGGTCGTCCTTTGTTGATTATCGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b12785 GAAGATGTTGAAGGCGAAGCGTTAGCTACTCTGGTAGTCAACAACATGCGCGGTATTGTA
       :::::::::::::: :: ::::::::::::::::: :: ::::::::::: :::::::: 
b33760 GAAGATGTTGAAGGAGAGGCGTTAGCTACTCTGGTTGTTAACAACATGCGTGGTATTGTC
              490       500       510       520       530       540

              550     
b12785 AAAGTATGTGCTGTC
       ::::::::::: :: 
b33760 AAAGTATGTGCGGTT
              550     

</pre>
<hr>
<A name=b33755>
<pre>
>><a onClick="window.open('getRecord.php?id=b33755',
                                'cpndb_record'); return false;" href="getRecord.php?id=b33755" target=_"blank">b33755</a> NZ_UGOW01000001 Legionella quateirensis NCTC123  (555 nt)
 initn: 2056 init1: 2056 opt: 2068  Z-score: 75.9  bits: 23.9 E(): 3.7e+02
banded Smith-Waterman score: 2068; 85.9% identity (85.9% similar) in 554 nt overlap (1-554:1-554)
<p>

               10        20        30        40        50        60
b12785 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAGGCAGTTGCTGCTGGAATG
       :: :: :::::::::::::::::::::::::::::  :::: :: :::::::: :: :::
b33755 GCTACTGTATTGGCTCGTTCTATTCTTGTTGAAGGGAACAAAGCTGTTGCTGCCGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12785 AACCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTGGCAGTTACTAAAAAATTA
       :: ::::::::::: ::::::::::: :: ::::: :::::::: ::::: :::::::::
b33755 AATCCAATGGATCTGAAACGCGGTATCGACAAAGCGGTATTGGCTGTTACCAAAAAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b12785 CAAGCCATGTCCAAGCCATGCAAAGACAGCAAGGCTATTGCTCAAGTTGGAACGATTTCT
       ::::: ::::::::::: :::::::: :  :: :: :: :: :::::::: :: ::::: 
b33755 CAAGCAATGTCCAAGCCTTGCAAAGATACTAAAGCAATCGCACAAGTTGGTACTATTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b12785 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       ::::: :: :: ::::: :::::: :::: ::::::::::::::::::::::: ::::::
b33755 GCTAACTCTGACGAAGCTATTGGTTCTATTATTGCTGAAGCAATGGAAAAAGTAGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12785 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       :: ::::: :: :: :::::::: :: :::::  : ::::::::  : :: :::::::::
b33755 GAAGGTGTGATCACTGTTGAAGACGGCAATGGTCTTGAAAATGAATTATCAGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12785 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAACAAAACATG
       :: ::::::::::: :: ::::: :::::::: :::::::::::::: ::::::::::::
b33755 GGGATGCAATTTGACCGTGGTTATATTTCTCCTTACTTCATCAACAATCAACAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12785 AGCTGCGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGCATTCGT
       :  :: ::::: :: :::::::: ::: : :: :::::::: :::::::: ::::: :::
b33755 ACTTGTGAACTGGAACATCCATTTATTCTGTTAGTTGACAAGAAAGTTTCAAGCATCCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12785 GAAATGTTGTCAGTACTTGAGGGTGTTGCCAAATCTGGACGTCCTTTATTGATCATTGCA
       :: ::::::::::::::::: :::::::: ::::: :: ::::: :::::::: ::::::
b33755 GACATGTTGTCAGTACTTGAAGGTGTTGCTAAATCAGGTCGTCCATTATTGATTATTGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b12785 GAAGATGTTGAAGGCGAAGCGTTAGCTACTCTGGTAGTCAACAACATGCGCGGTATTGTA
       :::::::::::::::::::: :: :: ::::::::::: ::::::::::: :::::::: 
b33755 GAAGATGTTGAAGGCGAAGCTTTGGCAACTCTGGTAGTTAACAACATGCGTGGTATTGTT
              490       500       510       520       530       540

              550     
b12785 AAAGTATGTGCTGTC
       :::::::::::::: 
b33755 AAAGTATGTGCTGTT
              550     

</pre>
<hr>
<A name=b34825>
<pre>
>><a onClick="window.open('getRecord.php?id=b34825',
                                'cpndb_record'); return false;" href="getRecord.php?id=b34825" target=_"blank">b34825</a> NZ_CAAAIL010000001 Legionella  quateirensis  Th  (555 nt)
 initn: 2056 init1: 2056 opt: 2068  Z-score: 75.9  bits: 23.9 E(): 3.7e+02
banded Smith-Waterman score: 2068; 85.9% identity (85.9% similar) in 554 nt overlap (1-554:1-554)
<p>

               10        20        30        40        50        60
b12785 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAGGCAGTTGCTGCTGGAATG
       :: :: :::::::::::::::::::::::::::::  :::: :: :::::::: :: :::
b34825 GCTACTGTATTGGCTCGTTCTATTCTTGTTGAAGGGAACAAAGCTGTTGCTGCCGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12785 AACCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTGGCAGTTACTAAAAAATTA
       :: ::::::::::: ::::::::::: :: ::::: :::::::: ::::: :::::::::
b34825 AATCCAATGGATCTGAAACGCGGTATCGACAAAGCGGTATTGGCTGTTACCAAAAAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b12785 CAAGCCATGTCCAAGCCATGCAAAGACAGCAAGGCTATTGCTCAAGTTGGAACGATTTCT
       ::::: ::::::::::: :::::::: :  :: :: :: :: :::::::: :: ::::: 
b34825 CAAGCAATGTCCAAGCCTTGCAAAGATACTAAAGCAATCGCACAAGTTGGTACTATTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b12785 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       ::::: :: :: ::::: :::::: :::: ::::::::::::::::::::::: ::::::
b34825 GCTAACTCTGACGAAGCTATTGGTTCTATTATTGCTGAAGCAATGGAAAAAGTAGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12785 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       :: ::::: :: :: :::::::: :: :::::  : ::::::::  : :: :::::::::
b34825 GAAGGTGTGATCACTGTTGAAGACGGCAATGGTCTTGAAAATGAATTATCAGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12785 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAACAAAACATG
       :: ::::::::::: :: ::::: :::::::: :::::::::::::: ::::::::::::
b34825 GGGATGCAATTTGACCGTGGTTATATTTCTCCTTACTTCATCAACAATCAACAAAACATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12785 AGCTGCGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGCATTCGT
       :  :: ::::: :: :::::::: ::: : :: :::::::: :::::::: ::::: :::
b34825 ACTTGTGAACTGGAACATCCATTTATTCTGTTAGTTGACAAGAAAGTTTCAAGCATCCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12785 GAAATGTTGTCAGTACTTGAGGGTGTTGCCAAATCTGGACGTCCTTTATTGATCATTGCA
       :: ::::::::::::::::: :::::::: ::::: :: ::::: :::::::: ::::::
b34825 GACATGTTGTCAGTACTTGAAGGTGTTGCTAAATCAGGTCGTCCATTATTGATTATTGCA
              430       440       450       460       470       480

              490       500       510       520       530       540
b12785 GAAGATGTTGAAGGCGAAGCGTTAGCTACTCTGGTAGTCAACAACATGCGCGGTATTGTA
       :::::::::::::::::::: :: :: ::::::::::: ::::::::::: :::::::: 
b34825 GAAGATGTTGAAGGCGAAGCTTTGGCAACTCTGGTAGTTAACAACATGCGTGGTATTGTT
              490       500       510       520       530       540

              550     
b12785 AAAGTATGTGCTGTC
       :::::::::::::: 
b34825 AAAGTATGTGCTGTT
              550     

</pre>
<hr>
<A name=b34832>
<pre>
>><a onClick="window.open('getRecord.php?id=b34832',
                                'cpndb_record'); return false;" href="getRecord.php?id=b34832" target=_"blank">b34832</a> NZ_CAAAIH010000002 Legionella  santicrucis  SC-  (555 nt)
 initn: 1993 init1: 1993 opt: 2005  Z-score: 74.6  bits: 23.6 E(): 4.4e+02
banded Smith-Waterman score: 2005; 84.7% identity (84.7% similar) in 554 nt overlap (1-554:1-554)
<p>

               10        20        30        40        50        60
b12785 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAGGCAGTTGCTGCTGGAATG
       :: :: :::::::::::: ::::: : ::::::::  : :: ::: :::: ::::: :::
b34832 GCTACTGTATTGGCTCGTGCTATTGTGGTTGAAGGCTATAAAGCAATTGCAGCTGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12785 AACCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTGGCAGTTACTAAAAAATTA
       :: :: :::::: : :: :: ::::::::::::::::: :  ::: : :: :::::::::
b34832 AATCCTATGGATTTGAAGCGTGGTATTGATAAAGCAGTTTCTGCAATCACCAAAAAATTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b12785 CAAGCCATGTCCAAGCCATGCAAAGACAGCAAGGCTATTGCTCAAGTTGGAACGATTTCT
       ::: ::::::: ::::: :::::::::: ::: :: ::::: ::::: :: :: ::::::
b34832 CAAACCATGTCTAAGCCTTGCAAAGACAACAAAGCAATTGCACAAGTAGGTACTATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b12785 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       ::::: :: :::::::: :::::: : :: ::::::   :::::::: ::::: ::::::
b34832 GCTAACTCTGATGAAGCAATTGGTTCAATTATTGCTAGTGCAATGGATAAAGTAGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12785 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       :: ::::::::::: :::::::: ::::::::::::::::::::  : ::::::::::::
b34832 GAAGGTGTTATTACTGTTGAAGACGGTAATGGATTGGAAAATGAATTATCTGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12785 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAACAAAACATG
       :: ::::: :::::::: :: :: ::::::::::::::::::::::: ::::::: ::::
b34832 GGGATGCAGTTTGATCGTGGATATATTTCTCCATACTTCATCAACAATCAACAAAGCATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12785 AGCTGCGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGCATTCGT
       :  :: :: :::::::::::::::::: : :: ::::: :: ::: :::: :::::::::
b34832 ACTTGTGAGCTTGAGCATCCATTCATTCTGTTAGTTGATAAGAAAATTTCTAGCATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12785 GAAATGTTGTCAGTACTTGAGGGTGTTGCCAAATCTGGACGTCCTTTATTGATCATTGCA
       :: :::::::: ::: : :: :::::::: :::::::: ::::: :::::::: ::::: 
b34832 GATATGTTGTCTGTATTGGAAGGTGTTGCAAAATCTGGCCGTCCATTATTGATTATTGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b12785 GAAGATGTTGAAGGCGAAGCGTTAGCTACTCTGGTAGTCAACAACATGCGCGGTATTGTA
       :::::::::::::: ::::: ::::::::: : ::::: :::::::::::::::::::: 
b34832 GAAGATGTTGAAGGTGAAGCTTTAGCTACTTTAGTAGTTAACAACATGCGCGGTATTGTT
              490       500       510       520       530       540

              550     
b12785 AAAGTATGTGCTGTC
       :::::::::::::: 
b34832 AAAGTATGTGCTGTT
              550     

</pre>
<hr>
<A name=b15810>
<pre>
>><a onClick="window.open('getRecord.php?id=b15810',
                                'cpndb_record'); return false;" href="getRecord.php?id=b15810" target=_"blank">b15810</a> NZ_ACZG01000001 Legionella longbeachae D-4968    (555 nt)
 initn: 1984 init1: 1984 opt: 1996  Z-score: 74.4  bits: 23.6 E(): 4.5e+02
banded Smith-Waterman score: 1996; 84.5% identity (84.5% similar) in 554 nt overlap (1-554:1-554)
<p>

               10        20        30        40        50        60
b12785 GCAACAGTATTGGCTCGTTCTATTCTTGTTGAAGGTCACAAGGCAGTTGCTGCTGGAATG
       :: :: :::::::::::::::::: : ::::::::  : :: ::: :::::::::: :::
b15810 GCGACTGTATTGGCTCGTTCTATTGTGGTTGAAGGCTATAAAGCAATTGCTGCTGGCATG
               10        20        30        40        50        60

               70        80        90       100       110       120
b12785 AACCCAATGGATCTCAAACGCGGTATTGATAAAGCAGTATTGGCAGTTACTAAAAAATTA
       ::::: :::::::: :: :: ::::::::::::::::::   ::: : :: :::::: ::
b15810 AACCCTATGGATCTGAAGCGTGGTATTGATAAAGCAGTAGCTGCAATCACCAAAAAACTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b12785 CAAGCCATGTCCAAGCCATGCAAAGACAGCAAGGCTATTGCTCAAGTTGGAACGATTTCT
       :::  :::::: ::::: ::::::::::  :: :: ::::: ::::: :: :: ::::::
b15810 CAAATCATGTCTAAGCCTTGCAAAGACAATAAAGCAATTGCACAAGTAGGTACTATTTCT
              130       140       150       160       170       180

              190       200       210       220       230       240
b12785 GCTAATTCCGATGAAGCGATTGGTGCTATCATTGCTGAAGCAATGGAAAAAGTTGGTAAA
       ::::: :: :::::::: :::::: : :: :::::    :::::::: ::::: ::::::
b15810 GCTAACTCTGATGAAGCAATTGGTTCAATTATTGCCAGTGCAATGGATAAAGTAGGTAAA
              190       200       210       220       230       240

              250       260       270       280       290       300
b12785 GAGGGTGTTATTACCGTTGAAGATGGTAATGGATTGGAAAATGAGCTTTCTGTTGTTGAA
       :: :: :::::::: :::::::: ::::::::::::::::::::  : ::::::::::::
b15810 GAAGGCGTTATTACTGTTGAAGACGGTAATGGATTGGAAAATGAATTATCTGTTGTTGAA
              250       260       270       280       290       300

              310       320       330       340       350       360
b12785 GGTATGCAATTTGATCGCGGTTACATTTCTCCATACTTCATCAACAACCAACAAAACATG
       :: ::::: :::::::: :: :: ::::::::::::::::::::::: ::::::: ::::
b15810 GGGATGCAGTTTGATCGTGGATATATTTCTCCATACTTCATCAACAATCAACAAAGCATG
              310       320       330       340       350       360

              370       380       390       400       410       420
b12785 AGCTGCGAACTTGAGCATCCATTCATTTTATTGGTTGACAAAAAAGTTTCCAGCATTCGT
       :  :: :: :::::::::::::::::: : :::::::: :: ::: ::::::::::::::
b15810 ACATGTGAGCTTGAGCATCCATTCATTCTGTTGGTTGATAAGAAAATTTCCAGCATTCGT
              370       380       390       400       410       420

              430       440       450       460       470       480
b12785 GAAATGTTGTCAGTACTTGAGGGTGTTGCCAAATCTGGACGTCCTTTATTGATCATTGCA
       :: :::::::: ::: : :: :::::::: ::::: :: ::::: :::::::: ::::: 
b15810 GATATGTTGTCTGTATTGGAAGGTGTTGCAAAATCAGGCCGTCCATTATTGATTATTGCT
              430       440       450       460       470       480

              490       500       510       520       530       540
b12785 GAAGATGTTGAAGGCGAAGCGTTAGCTACTCTGGTAGTCAACAACATGCGCGGTATTGTA
       ::::::::::: :::::::: ::::::::  : ::::: :::::::::::::::::::: 
b15810 GAAGATGTTGAGGGCGAAGCTTTAGCTACCTTAGTAGTGAACAACATGCGCGGTATTGTT
              490       500       510       520       530       540

              550     
b12785 AAAGTATGTGCTGTC
       :::::::::::::: 
b15810 AAAGTATGTGCTGTT
              550     

</pre>
<hr>
<p><pre>


555 residues in 1 query   sequences
10433008 residues in 18820 library sequences
 Scomplib [35.03]
 start: Mon Jul 22 02:09:40 2024 done: Mon Jul 22 02:09:42 2024
 Total Scan time:  2.340 Total Display time:  0.010

Function used was FASTA [version 35.03 Feb. 18, 2008]
</pre>