/var/www/html/cpndb/fasta_results/b10342.fasta# /data/www/cpndb/fasta35 -E 200 -Q -m 6 -b 20 -d 20 -z 2 -H /data/www/cpndb/fasta_results/b10342 /data/www/cpndb/blastDBs/reference_a_nut
<pre>
FASTA searches a protein or DNA sequence data bank
 version 35.03 Feb. 18, 2008
Please cite:
 W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

</pre>
Query: /data/www/cpndb/fasta_results/b10342
<pre>
  1>>>b10342 552 nt - 552 nt
Library: /data/www/cpndb/blastDBs/reference_a_nut 10433008 residues in 18820 sequences

10433008 residues in 18820 sequences
Statistics: MLE_cen statistics: Lambda= 0.0027;  K=1.146e-05 (cen=941)
Algorithm: FASTA (3.5 Sept 2006) [optimized]
Parameters: +5/-4 matrix (5:-4) ktup: 6
 join: 51, opt: 36, open/ext: -12/-4, width:  16
 Scan time:  2.290
</pre>
<p>
<hr>
<p>
<p><pre>

The best scores are:                                      opt bits E(18820)
<a onClick="window.open('getRecord.php?id=b23049',
                                'cpndb_record'); return false;" href="getRecord.php?id=b23049" target=_"blank">b23049</a> NZ_AOCP01000024 Staphylococcus aureus K ( 552) [f] 2760 27.3      36 <A HREF="#b23049">align</A>
<a onClick="window.open('getRecord.php?id=b20194',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20194" target=_"blank">b20194</a> AGTY01000024 Staphylococcus aureus subs ( 552) [f] 2760 27.3      36 <A HREF="#b20194">align</A>
<a onClick="window.open('getRecord.php?id=b260',
                                'cpndb_record'); return false;" href="getRecord.php?id=b260" target=_"blank">b260</a> AF060188 Staphylococcus aureus ATCC 13565 ( 552) [f] 2760 27.3      36 <A HREF="#b260">align</A>
<a onClick="window.open('getRecord.php?id=b20195',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20195" target=_"blank">b20195</a> AGTW01000003 Staphylococcus aureus subs ( 552) [f] 2760 27.3      36 <A HREF="#b20195">align</A>
<a onClick="window.open('getRecord.php?id=b261',
                                'cpndb_record'); return false;" href="getRecord.php?id=b261" target=_"blank">b261</a> AF060189 Staphylococcus aureus ATCC 14458 ( 552) [f] 2760 27.3      36 <A HREF="#b261">align</A>
<a onClick="window.open('getRecord.php?id=b16947',
                                'cpndb_record'); return false;" href="getRecord.php?id=b16947" target=_"blank">b16947</a> ADVP01000037 Staphylococcus aureus subs ( 552) [f] 2760 27.3      36 <A HREF="#b16947">align</A>
<a onClick="window.open('getRecord.php?id=b20338',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20338" target=_"blank">b20338</a> AIEQ01000009 Staphylococcus aureus subs ( 552) [f] 2760 27.3      36 <A HREF="#b20338">align</A>
<a onClick="window.open('getRecord.php?id=b20332',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20332" target=_"blank">b20332</a> AHVV01000013 Staphylococcus aureus subs ( 552) [f] 2760 27.3      36 <A HREF="#b20332">align</A>
<a onClick="window.open('getRecord.php?id=b255',
                                'cpndb_record'); return false;" href="getRecord.php?id=b255" target=_"blank">b255</a> AF036324 Staphylococcus aureus subsp. aur ( 552) [f] 2760 27.3      36 <A HREF="#b255">align</A>
<a onClick="window.open('getRecord.php?id=b20537',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20537" target=_"blank">b20537</a> CP003033 Staphylococcus aureus subsp. a ( 552) [f] 2760 27.3      36 <A HREF="#b20537">align</A>
<a onClick="window.open('getRecord.php?id=b22697',
                                'cpndb_record'); return false;" href="getRecord.php?id=b22697" target=_"blank">b22697</a> AMPF01000062 Staphylococcus aureus subs ( 552) [f] 2760 27.3      36 <A HREF="#b22697">align</A>
<a onClick="window.open('getRecord.php?id=b18491',
                                'cpndb_record'); return false;" href="getRecord.php?id=b18491" target=_"blank">b18491</a> AECP01000015 Staphylococcus aureus subs ( 552) [f] 2760 27.3      36 <A HREF="#b18491">align</A>
<a onClick="window.open('getRecord.php?id=b5717',
                                'cpndb_record'); return false;" href="getRecord.php?id=b5717" target=_"blank">b5717</a> BX571857 Staphylococcus aureus subsp. au ( 552) [f] 2760 27.3      36 <A HREF="#b5717">align</A>
<a onClick="window.open('getRecord.php?id=b18492',
                                'cpndb_record'); return false;" href="getRecord.php?id=b18492" target=_"blank">b18492</a> AECR01000039 Staphylococcus aureus subs ( 552) [f] 2760 27.3      36 <A HREF="#b18492">align</A>
<a onClick="window.open('getRecord.php?id=b23504',
                                'cpndb_record'); return false;" href="getRecord.php?id=b23504" target=_"blank">b23504</a> NZ_BAEA01000036 Staphylococcus aureus s ( 552) [f] 2760 27.3      36 <A HREF="#b23504">align</A>
<a onClick="window.open('getRecord.php?id=b2689',
                                'cpndb_record'); return false;" href="getRecord.php?id=b2689" target=_"blank">b2689</a> NC_003923 Staphylococcus aureus subsp. a ( 552) [f] 2760 27.3      36 <A HREF="#b2689">align</A>
<a onClick="window.open('getRecord.php?id=b20333',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20333" target=_"blank">b20333</a> AHVN01000010 Staphylococcus aureus subs ( 552) [f] 2760 27.3      36 <A HREF="#b20333">align</A>
<a onClick="window.open('getRecord.php?id=b22702',
                                'cpndb_record'); return false;" href="getRecord.php?id=b22702" target=_"blank">b22702</a> AMYL01000007 Staphylococcus aureus subs ( 552) [f] 2760 27.3      36 <A HREF="#b22702">align</A>
<a onClick="window.open('getRecord.php?id=b20530',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20530" target=_"blank">b20530</a> NC_016912  Staphylococcus aureus subsp. ( 552) [f] 2760 27.3      36 <A HREF="#b20530">align</A>
<a onClick="window.open('getRecord.php?id=b20328',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20328" target=_"blank">b20328</a> AHVY01000009 Staphylococcus aureus subs ( 552) [f] 2760 27.3      36 <A HREF="#b20328">align</A>
</pre><p><hr><p>

>>>b10342, 552 nt vs /data/www/cpndb/blastDBs/reference_a_nut library

<A name=b23049>
<pre>
>><a onClick="window.open('getRecord.php?id=b23049',
                                'cpndb_record'); return false;" href="getRecord.php?id=b23049" target=_"blank">b23049</a> NZ_AOCP01000024 Staphylococcus aureus KT/314250  (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 94.3  bits: 27.3 E():   36
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b10342 GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23049 GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
               10        20        30        40        50        60

               70        80        90       100       110       120
b10342 AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23049 AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b10342 CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23049 CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b10342 GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23049 GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b10342 GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23049 GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b10342 ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23049 ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b10342 GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23049 GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b10342 ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23049 ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b10342 GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23049 GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
              490       500       510       520       530       540

              550  
b10342 GCTGTTGCAGTA
       ::::::::::::
b23049 GCTGTTGCAGTA
              550  

</pre>
<hr>
<A name=b20194>
<pre>
>><a onClick="window.open('getRecord.php?id=b20194',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20194" target=_"blank">b20194</a> AGTY01000024 Staphylococcus aureus subsp. aureu  (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 94.3  bits: 27.3 E():   36
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b10342 GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20194 GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
               10        20        30        40        50        60

               70        80        90       100       110       120
b10342 AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20194 AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b10342 CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20194 CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b10342 GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20194 GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b10342 GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20194 GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b10342 ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20194 ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b10342 GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20194 GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b10342 ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20194 ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b10342 GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20194 GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
              490       500       510       520       530       540

              550  
b10342 GCTGTTGCAGTA
       ::::::::::::
b20194 GCTGTTGCAGTA
              550  

</pre>
<hr>
<A name=b260>
<pre>
>><a onClick="window.open('getRecord.php?id=b260',
                                'cpndb_record'); return false;" href="getRecord.php?id=b260" target=_"blank">b260</a> AF060188 Staphylococcus aureus ATCC 13565          (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 94.3  bits: 27.3 E():   36
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b10342 GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b260   GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
               10        20        30        40        50        60

               70        80        90       100       110       120
b10342 AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b260   AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b10342 CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b260   CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b10342 GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b260   GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b10342 GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b260   GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b10342 ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b260   ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b10342 GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b260   GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b10342 ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b260   ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b10342 GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b260   GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
              490       500       510       520       530       540

              550  
b10342 GCTGTTGCAGTA
       ::::::::::::
b260   GCTGTTGCAGTA
              550  

</pre>
<hr>
<A name=b20195>
<pre>
>><a onClick="window.open('getRecord.php?id=b20195',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20195" target=_"blank">b20195</a> AGTW01000003 Staphylococcus aureus subsp. aureu  (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 94.3  bits: 27.3 E():   36
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b10342 GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20195 GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
               10        20        30        40        50        60

               70        80        90       100       110       120
b10342 AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20195 AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b10342 CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20195 CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b10342 GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20195 GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b10342 GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20195 GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b10342 ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20195 ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b10342 GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20195 GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b10342 ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20195 ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b10342 GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20195 GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
              490       500       510       520       530       540

              550  
b10342 GCTGTTGCAGTA
       ::::::::::::
b20195 GCTGTTGCAGTA
              550  

</pre>
<hr>
<A name=b261>
<pre>
>><a onClick="window.open('getRecord.php?id=b261',
                                'cpndb_record'); return false;" href="getRecord.php?id=b261" target=_"blank">b261</a> AF060189 Staphylococcus aureus ATCC 14458          (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 94.3  bits: 27.3 E():   36
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b10342 GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b261   GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
               10        20        30        40        50        60

               70        80        90       100       110       120
b10342 AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b261   AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b10342 CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b261   CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b10342 GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b261   GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b10342 GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b261   GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b10342 ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b261   ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b10342 GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b261   GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b10342 ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b261   ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b10342 GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b261   GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
              490       500       510       520       530       540

              550  
b10342 GCTGTTGCAGTA
       ::::::::::::
b261   GCTGTTGCAGTA
              550  

</pre>
<hr>
<A name=b16947>
<pre>
>><a onClick="window.open('getRecord.php?id=b16947',
                                'cpndb_record'); return false;" href="getRecord.php?id=b16947" target=_"blank">b16947</a> ADVP01000037 Staphylococcus aureus subsp. aureu  (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 94.3  bits: 27.3 E():   36
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b10342 GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b16947 GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
               10        20        30        40        50        60

               70        80        90       100       110       120
b10342 AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b16947 AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b10342 CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b16947 CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b10342 GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b16947 GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b10342 GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b16947 GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b10342 ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b16947 ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b10342 GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b16947 GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b10342 ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b16947 ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b10342 GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b16947 GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
              490       500       510       520       530       540

              550  
b10342 GCTGTTGCAGTA
       ::::::::::::
b16947 GCTGTTGCAGTA
              550  

</pre>
<hr>
<A name=b20338>
<pre>
>><a onClick="window.open('getRecord.php?id=b20338',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20338" target=_"blank">b20338</a> AIEQ01000009 Staphylococcus aureus subsp. aureu  (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 94.3  bits: 27.3 E():   36
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b10342 GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20338 GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
               10        20        30        40        50        60

               70        80        90       100       110       120
b10342 AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20338 AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b10342 CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20338 CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b10342 GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20338 GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b10342 GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20338 GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b10342 ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20338 ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b10342 GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20338 GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b10342 ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20338 ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b10342 GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20338 GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
              490       500       510       520       530       540

              550  
b10342 GCTGTTGCAGTA
       ::::::::::::
b20338 GCTGTTGCAGTA
              550  

</pre>
<hr>
<A name=b20332>
<pre>
>><a onClick="window.open('getRecord.php?id=b20332',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20332" target=_"blank">b20332</a> AHVV01000013 Staphylococcus aureus subsp. aureu  (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 94.3  bits: 27.3 E():   36
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b10342 GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20332 GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
               10        20        30        40        50        60

               70        80        90       100       110       120
b10342 AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20332 AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b10342 CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20332 CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b10342 GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20332 GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b10342 GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20332 GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b10342 ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20332 ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b10342 GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20332 GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b10342 ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20332 ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b10342 GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20332 GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
              490       500       510       520       530       540

              550  
b10342 GCTGTTGCAGTA
       ::::::::::::
b20332 GCTGTTGCAGTA
              550  

</pre>
<hr>
<A name=b255>
<pre>
>><a onClick="window.open('getRecord.php?id=b255',
                                'cpndb_record'); return false;" href="getRecord.php?id=b255" target=_"blank">b255</a> AF036324 Staphylococcus aureus subsp. aureus ATCC  (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 94.3  bits: 27.3 E():   36
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b10342 GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b255   GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
               10        20        30        40        50        60

               70        80        90       100       110       120
b10342 AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b255   AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b10342 CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b255   CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b10342 GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b255   GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b10342 GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b255   GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b10342 ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b255   ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b10342 GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b255   GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b10342 ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b255   ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b10342 GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b255   GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
              490       500       510       520       530       540

              550  
b10342 GCTGTTGCAGTA
       ::::::::::::
b255   GCTGTTGCAGTA
              550  

</pre>
<hr>
<A name=b20537>
<pre>
>><a onClick="window.open('getRecord.php?id=b20537',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20537" target=_"blank">b20537</a> CP003033 Staphylococcus aureus subsp. aureus VC  (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 94.3  bits: 27.3 E():   36
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b10342 GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20537 GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
               10        20        30        40        50        60

               70        80        90       100       110       120
b10342 AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20537 AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b10342 CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20537 CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b10342 GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20537 GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b10342 GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20537 GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b10342 ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20537 ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b10342 GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20537 GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b10342 ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20537 ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b10342 GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20537 GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
              490       500       510       520       530       540

              550  
b10342 GCTGTTGCAGTA
       ::::::::::::
b20537 GCTGTTGCAGTA
              550  

</pre>
<hr>
<A name=b22697>
<pre>
>><a onClick="window.open('getRecord.php?id=b22697',
                                'cpndb_record'); return false;" href="getRecord.php?id=b22697" target=_"blank">b22697</a> AMPF01000062 Staphylococcus aureus subsp. aureu  (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 94.3  bits: 27.3 E():   36
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b10342 GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b22697 GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
               10        20        30        40        50        60

               70        80        90       100       110       120
b10342 AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b22697 AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b10342 CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b22697 CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b10342 GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b22697 GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b10342 GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b22697 GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b10342 ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b22697 ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b10342 GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b22697 GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b10342 ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b22697 ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b10342 GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b22697 GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
              490       500       510       520       530       540

              550  
b10342 GCTGTTGCAGTA
       ::::::::::::
b22697 GCTGTTGCAGTA
              550  

</pre>
<hr>
<A name=b18491>
<pre>
>><a onClick="window.open('getRecord.php?id=b18491',
                                'cpndb_record'); return false;" href="getRecord.php?id=b18491" target=_"blank">b18491</a> AECP01000015 Staphylococcus aureus subsp. aureu  (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 94.3  bits: 27.3 E():   36
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b10342 GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18491 GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
               10        20        30        40        50        60

               70        80        90       100       110       120
b10342 AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18491 AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b10342 CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18491 CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b10342 GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18491 GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b10342 GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18491 GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b10342 ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18491 ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b10342 GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18491 GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b10342 ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18491 ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b10342 GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18491 GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
              490       500       510       520       530       540

              550  
b10342 GCTGTTGCAGTA
       ::::::::::::
b18491 GCTGTTGCAGTA
              550  

</pre>
<hr>
<A name=b5717>
<pre>
>><a onClick="window.open('getRecord.php?id=b5717',
                                'cpndb_record'); return false;" href="getRecord.php?id=b5717" target=_"blank">b5717</a> BX571857 Staphylococcus aureus subsp. aureus MSS  (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 94.3  bits: 27.3 E():   36
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b10342 GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b5717  GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
               10        20        30        40        50        60

               70        80        90       100       110       120
b10342 AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b5717  AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b10342 CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b5717  CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b10342 GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b5717  GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b10342 GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b5717  GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b10342 ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b5717  ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b10342 GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b5717  GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b10342 ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b5717  ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b10342 GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b5717  GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
              490       500       510       520       530       540

              550  
b10342 GCTGTTGCAGTA
       ::::::::::::
b5717  GCTGTTGCAGTA
              550  

</pre>
<hr>
<A name=b18492>
<pre>
>><a onClick="window.open('getRecord.php?id=b18492',
                                'cpndb_record'); return false;" href="getRecord.php?id=b18492" target=_"blank">b18492</a> AECR01000039 Staphylococcus aureus subsp. aureu  (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 94.3  bits: 27.3 E():   36
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b10342 GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18492 GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
               10        20        30        40        50        60

               70        80        90       100       110       120
b10342 AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18492 AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b10342 CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18492 CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b10342 GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18492 GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b10342 GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18492 GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b10342 ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18492 ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b10342 GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18492 GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b10342 ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18492 ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b10342 GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b18492 GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
              490       500       510       520       530       540

              550  
b10342 GCTGTTGCAGTA
       ::::::::::::
b18492 GCTGTTGCAGTA
              550  

</pre>
<hr>
<A name=b23504>
<pre>
>><a onClick="window.open('getRecord.php?id=b23504',
                                'cpndb_record'); return false;" href="getRecord.php?id=b23504" target=_"blank">b23504</a> NZ_BAEA01000036 Staphylococcus aureus subsp. au  (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 94.3  bits: 27.3 E():   36
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b10342 GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23504 GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
               10        20        30        40        50        60

               70        80        90       100       110       120
b10342 AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23504 AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b10342 CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23504 CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b10342 GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23504 GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b10342 GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23504 GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b10342 ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23504 ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b10342 GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23504 GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b10342 ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23504 ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b10342 GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b23504 GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
              490       500       510       520       530       540

              550  
b10342 GCTGTTGCAGTA
       ::::::::::::
b23504 GCTGTTGCAGTA
              550  

</pre>
<hr>
<A name=b2689>
<pre>
>><a onClick="window.open('getRecord.php?id=b2689',
                                'cpndb_record'); return false;" href="getRecord.php?id=b2689" target=_"blank">b2689</a> NC_003923 Staphylococcus aureus subsp. aureus st  (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 94.3  bits: 27.3 E():   36
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b10342 GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b2689  GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
               10        20        30        40        50        60

               70        80        90       100       110       120
b10342 AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b2689  AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b10342 CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b2689  CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b10342 GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b2689  GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b10342 GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b2689  GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b10342 ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b2689  ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b10342 GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b2689  GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b10342 ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b2689  ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b10342 GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b2689  GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
              490       500       510       520       530       540

              550  
b10342 GCTGTTGCAGTA
       ::::::::::::
b2689  GCTGTTGCAGTA
              550  

</pre>
<hr>
<A name=b20333>
<pre>
>><a onClick="window.open('getRecord.php?id=b20333',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20333" target=_"blank">b20333</a> AHVN01000010 Staphylococcus aureus subsp. aureu  (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 94.3  bits: 27.3 E():   36
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b10342 GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20333 GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
               10        20        30        40        50        60

               70        80        90       100       110       120
b10342 AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20333 AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b10342 CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20333 CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b10342 GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20333 GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b10342 GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20333 GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b10342 ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20333 ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b10342 GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20333 GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b10342 ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20333 ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b10342 GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20333 GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
              490       500       510       520       530       540

              550  
b10342 GCTGTTGCAGTA
       ::::::::::::
b20333 GCTGTTGCAGTA
              550  

</pre>
<hr>
<A name=b22702>
<pre>
>><a onClick="window.open('getRecord.php?id=b22702',
                                'cpndb_record'); return false;" href="getRecord.php?id=b22702" target=_"blank">b22702</a> AMYL01000007 Staphylococcus aureus subsp. aureu  (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 94.3  bits: 27.3 E():   36
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b10342 GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b22702 GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
               10        20        30        40        50        60

               70        80        90       100       110       120
b10342 AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b22702 AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b10342 CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b22702 CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b10342 GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b22702 GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b10342 GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b22702 GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b10342 ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b22702 ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b10342 GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b22702 GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b10342 ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b22702 ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b10342 GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b22702 GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
              490       500       510       520       530       540

              550  
b10342 GCTGTTGCAGTA
       ::::::::::::
b22702 GCTGTTGCAGTA
              550  

</pre>
<hr>
<A name=b20530>
<pre>
>><a onClick="window.open('getRecord.php?id=b20530',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20530" target=_"blank">b20530</a> NC_016912  Staphylococcus aureus subsp. aureus   (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 94.3  bits: 27.3 E():   36
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b10342 GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20530 GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
               10        20        30        40        50        60

               70        80        90       100       110       120
b10342 AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20530 AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b10342 CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20530 CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b10342 GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20530 GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b10342 GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20530 GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b10342 ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20530 ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b10342 GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20530 GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b10342 ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20530 ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b10342 GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20530 GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
              490       500       510       520       530       540

              550  
b10342 GCTGTTGCAGTA
       ::::::::::::
b20530 GCTGTTGCAGTA
              550  

</pre>
<hr>
<A name=b20328>
<pre>
>><a onClick="window.open('getRecord.php?id=b20328',
                                'cpndb_record'); return false;" href="getRecord.php?id=b20328" target=_"blank">b20328</a> AHVY01000009 Staphylococcus aureus subsp. aureu  (552 nt)
 initn: 2760 init1: 2760 opt: 2760  Z-score: 94.3  bits: 27.3 E():   36
banded Smith-Waterman score: 2760; 100.0% identity (100.0% similar) in 552 nt overlap (1-552:1-552)
<p>

               10        20        30        40        50        60
b10342 GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20328 GCAACAGTATTAGCTCAAGCAATGATTCAAGAAGGCTTGAAAAATGTTACAAGTGGTGCG
               10        20        30        40        50        60

               70        80        90       100       110       120
b10342 AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20328 AACCCAGTTGGTTTACGACAAGGTATCGACAAAGCAGTTAAAGTTGCTGTTGAAGCGTTA
               70        80        90       100       110       120

              130       140       150       160       170       180
b10342 CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20328 CATGAAAATTCTCAAAAAGTTGAAAATAAAAATGAAATTGCGCAAGTAGGTGCGATTTCA
              130       140       150       160       170       180

              190       200       210       220       230       240
b10342 GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20328 GCAGCAGATGAAGAAATTGGACGTTATATTTCTGAAGCTATGGAAAAAGTAGGTAACGAT
              190       200       210       220       230       240

              250       260       270       280       290       300
b10342 GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20328 GGTGTCATTACAATTGAAGAATCAAATGGACTAAACACTGAACTAGAAGTGGTTGAAGGT
              250       260       270       280       290       300

              310       320       330       340       350       360
b10342 ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20328 ATGCAATTTGATCGTGGTTATCAATCACCGTATATGGTTACTGATTCAGATAAAATGGTT
              310       320       330       340       350       360

              370       380       390       400       410       420
b10342 GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20328 GCTGAATTAGAACGCCCATACATTTTAGTAACAGATAAGAAAATCTCGTCTTTCCAAGAT
              370       380       390       400       410       420

              430       440       450       460       470       480
b10342 ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20328 ATCTTACCTTTATTAGAACAAGTGGTTCAATCTAATCGTCCAATCTTAATTGTAGCTGAT
              430       440       450       460       470       480

              490       500       510       520       530       540
b10342 GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
b20328 GAAGTTGAAGGCGATGCATTAACAAATATCGTGCTAAACCGTATGCGTGGCACATTTACA
              490       500       510       520       530       540

              550  
b10342 GCTGTTGCAGTA
       ::::::::::::
b20328 GCTGTTGCAGTA
              550  

</pre>
<hr>
<p><pre>


552 residues in 1 query   sequences
10433008 residues in 18820 library sequences
 Scomplib [35.03]
 start: Mon Jul 22 01:01:58 2024 done: Mon Jul 22 01:02:00 2024
 Total Scan time:  2.290 Total Display time:  0.010

Function used was FASTA [version 35.03 Feb. 18, 2008]
</pre>