RECORD DETAILS

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Chaperonin ID: b9948
Chaperonin Group: I
Deposit Date: 2006-12-27
Type: ref
Type strain?: no
Genus: Stenotrophomonas
Species: maltophilia
Strain: R551-3
Lineage: root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas
Original ID: -
CUTC ID: -
Nucleotide Genbank Accession: NC_011071
Peptide Genbank Accession: YP_002030008
Best FASTA Match: -
Date of FASTA search: -
FASTA identity %: -
Best BLASTP Match: -
Date of BLASTP search: -
BLASTP identity %: -
Source: Genbank
Notes: From whole genome sequence. Stenotrophomonas maltophilia R551-3 was isolated from the poplar Populus trichocarpa x deltoides cv. "Hoogvorst" and is the second most common endophytic bacteria in poplar.
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB |
ATGGCTGCCAAGGATATTCGTTTCGGTGAAGACGCCCGTTCGCGCATGGTGCGCGGCGTC
AACGTTCTCGCCAATGCCGTCAAGGCCACCCTGGGCCCGAAGGGCCGCAACGTCGTGCTG
GAAAAGAGCTTCGGCGCTCCGACCATCACCAAGGACGGCGTCTCCGTCGCCAAGGAAATC
GAACTGGCTGACAAGTTCGAGAACATGGGCGCGCAGATGGTGAAGGAAGTTGCTTCCCGC
ACCAACGACGACGCTGGCGACGGCACCACCACCGCCACCGTGCTGGCCCAGGCCCTGATC
CGCGAAGGTGCCAAGGCTGTTGCCGCCGGCATGAACCCGATGGACCTCAAGCGCGGTATC
GACAAGGCCGTCGTGGCCGCCGTCAACGAGCTGAAGAGCATCTCCAAGCCGACCGCTGAC
GACAAGGCGATCGCCCAGGTCGGCACCATCTCGGCCAACTCGGACGAGTCGATCGGCCAG
ATCATCGCTGACGCGATGAAGGAAGTCGGCAAGGAAGGCGTGATCACCGTTGAAGAGGGC
TCGGGCCTGGACAACGAGCTGGACGTGGTCAAGGGCATGCAGTTCGACCGCGGCTACCTG
TCCCCGTACTTCATCAACAACCAGCAGTCGCAGACCGCTGATCTGGATGACCCGTTCATC
CTGCTGCACGACAAGAAGATCTCCAACGTCCGTGACCTGCTGCCGGTGCTGGAAGGCGTC
GCCAAGGCCGGCAAGCCGCTGCTGATCGTCGCTGAAGAAGTCGAAGGCGAAGCGCTGGCG
ACCCTGGTGGTCAACACCATCCGTGGCATCGTCAAGGTCGTGGCCGTCAAGGCTCCGGGC
TTCGGCGACCGTCGCAAGGCGATGCTGGAAGACATGGCCGTGCTGACCGGCGGCACCGTG
ATCTCCGAAGAAGTGGGCCTGTCGCTGGAAAAGGCCACCATCAAGGATCTCGGCCGCGCC
AAGAAGGTGCAGGTCTCCAAGGAAAACACCACCATCATCGATGGCGTGGGTGACAAGGCT
GCGGTCGATTCGCGCGTTGCGCAGATCAAGACCCAGATCCAGGACACCTCCTCGGATTAC
GACCGCGAGAAGCTGCAGGAACGCGTGGCCAAGCTGGCCGGCGGCGTTGCCGTGATCAAG
GTCGGTGCCTCGACCGAAATCGAAATGAAGGAAAAGAAGGACCGCGTCGACGACGCCCTG
CACGCCACCCGTGCAGCCGTTGAAGAAGGCGTGGTCCCGGGCGGCGGCGTTGCCCTGGTC
CGTGCGGTCTCCGCGCTGGCTGGTCTGAAGGGTGCCAACGAAGACCAGAACCACGGCATC
CAGATCGCCCTGCGCGCGATGGAAGCCCCGCTGCGCGAGATCGTCGCCAACGCCGGCGAA
GAGCCGTCGGTCATCGTCAACAAGGTCAAGGAAGGCACCGGCAGCTTCGGCTACAACGCC
GCCACCGGCGAGTTCGGTGACATGCTGCAGTTCGGCATCCTGGACCCGACCAAGGTGACC
CGTTCGGCGCTGCAGAACGCAGCTTCGATCGCTGGCCTGATGATCACCACCGAAGCCATG
GTTGCCGAAGCTCCGAAGAAGGACGAGCCGGCCATGGGTGGCGCCGGTGGCATGGGCGGC
ATGGGTGGCATGGGCGGCATGGACTTCTAA
Full Peptide Sequence:
BLAST this sequence:
cpnDB |
MAAKDIRFGEDARSRMVRGVNVLANAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEI
ELADKFENMGAQMVKEVASRTNDDAGDGTTTATVLAQALIREGAKAVAAGMNPMDLKRGI
DKAVVAAVNELKSISKPTADDKAIAQVGTISANSDESIGQIIADAMKEVGKEGVITVEEG
SGLDNELDVVKGMQFDRGYLSPYFINNQQSQTADLDDPFILLHDKKISNVRDLLPVLEGV
AKAGKPLLIVAEEVEGEALATLVVNTIRGIVKVVAVKAPGFGDRRKAMLEDMAVLTGGTV
ISEEVGLSLEKATIKDLGRAKKVQVSKENTTIIDGVGDKAAVDSRVAQIKTQIQDTSSDY
DREKLQERVAKLAGGVAVIKVGASTEIEMKEKKDRVDDALHATRAAVEEGVVPGGGVALV
RAVSALAGLKGANEDQNHGIQIALRAMEAPLREIVANAGEEPSVIVNKVKEGTGSFGYNA
ATGEFGDMLQFGILDPTKVTRSALQNAASIAGLMITTEAMVAEAPKKDEPAMGGAGGMGG
MGGMGGMDF
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB |
GCCACCGTGCTGGCCCAGGCCCTGATCCGCGAAGGTGCCAAGGCTGTTGCCGCCGGCATG
AACCCGATGGACCTCAAGCGCGGTATCGACAAGGCCGTCGTGGCCGCCGTCAACGAGCTG
AAGAGCATCTCCAAGCCGACCGCTGACGACAAGGCGATCGCCCAGGTCGGCACCATCTCG
GCCAACTCGGACGAGTCGATCGGCCAGATCATCGCTGACGCGATGAAGGAAGTCGGCAAG
GAAGGCGTGATCACCGTTGAAGAGGGCTCGGGCCTGGACAACGAGCTGGACGTGGTCAAG
GGCATGCAGTTCGACCGCGGCTACCTGTCCCCGTACTTCATCAACAACCAGCAGTCGCAG
ACCGCTGATCTGGATGACCCGTTCATCCTGCTGCACGACAAGAAGATCTCCAACGTCCGT
GACCTGCTGCCGGTGCTGGAAGGCGTCGCCAAGGCCGGCAAGCCGCTGCTGATCGTCGCT
GAAGAAGTCGAAGGCGAAGCGCTGGCGACCCTGGTGGTCAACACCATCCGTGGCATCGTC
AAGGTCGTGGCCGTC
Peptide UT Sequence:
BLAST this sequence:
cpnDB |
ATVLAQALIREGAKAVAAGMNPMDLKRGIDKAVVAAVNELKSISKPTADDKAIAQVGTIS
ANSDESIGQIIADAMKEVGKEGVITVEEGSGLDNELDVVKGMQFDRGYLSPYFINNQQSQ
TADLDDPFILLHDKKISNVRDLLPVLEGVAKAGKPLLIVAEEVEGEALATLVVNTIRGIV
KVVAV