RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close WindowChaperonin ID: | b9948 |
Chaperonin Group: | I |
Deposit Date: | 2006-12-27 |
Type: | ref |
Type strain?: | no |
Genus: | Stenotrophomonas |
Species: | maltophilia |
Strain: | R551-3 |
Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas |
Original ID: | - |
CUTC ID: | - |
Nucleotide Genbank Accession: | NC_011071 |
Peptide Genbank Accession: | YP_002030008 |
Best FASTA Match: | - |
Date of FASTA search: | - |
FASTA identity %: | - |
Best BLASTP Match: | - |
Date of BLASTP search: | - |
BLASTP identity %: | - |
Source: | Genbank |
Notes: | From whole genome sequence. Stenotrophomonas maltophilia R551-3 was isolated from the poplar Populus trichocarpa x deltoides cv. "Hoogvorst" and is the second most common endophytic bacteria in poplar. |
Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCTGCCAAGGATATTCGTTTCGGTGAAGACGCCCGTTCGCGCATGGTGCGCGGCGTC AACGTTCTCGCCAATGCCGTCAAGGCCACCCTGGGCCCGAAGGGCCGCAACGTCGTGCTG GAAAAGAGCTTCGGCGCTCCGACCATCACCAAGGACGGCGTCTCCGTCGCCAAGGAAATC GAACTGGCTGACAAGTTCGAGAACATGGGCGCGCAGATGGTGAAGGAAGTTGCTTCCCGC ACCAACGACGACGCTGGCGACGGCACCACCACCGCCACCGTGCTGGCCCAGGCCCTGATC CGCGAAGGTGCCAAGGCTGTTGCCGCCGGCATGAACCCGATGGACCTCAAGCGCGGTATC GACAAGGCCGTCGTGGCCGCCGTCAACGAGCTGAAGAGCATCTCCAAGCCGACCGCTGAC GACAAGGCGATCGCCCAGGTCGGCACCATCTCGGCCAACTCGGACGAGTCGATCGGCCAG ATCATCGCTGACGCGATGAAGGAAGTCGGCAAGGAAGGCGTGATCACCGTTGAAGAGGGC TCGGGCCTGGACAACGAGCTGGACGTGGTCAAGGGCATGCAGTTCGACCGCGGCTACCTG TCCCCGTACTTCATCAACAACCAGCAGTCGCAGACCGCTGATCTGGATGACCCGTTCATC CTGCTGCACGACAAGAAGATCTCCAACGTCCGTGACCTGCTGCCGGTGCTGGAAGGCGTC GCCAAGGCCGGCAAGCCGCTGCTGATCGTCGCTGAAGAAGTCGAAGGCGAAGCGCTGGCG ACCCTGGTGGTCAACACCATCCGTGGCATCGTCAAGGTCGTGGCCGTCAAGGCTCCGGGC TTCGGCGACCGTCGCAAGGCGATGCTGGAAGACATGGCCGTGCTGACCGGCGGCACCGTG ATCTCCGAAGAAGTGGGCCTGTCGCTGGAAAAGGCCACCATCAAGGATCTCGGCCGCGCC AAGAAGGTGCAGGTCTCCAAGGAAAACACCACCATCATCGATGGCGTGGGTGACAAGGCT GCGGTCGATTCGCGCGTTGCGCAGATCAAGACCCAGATCCAGGACACCTCCTCGGATTAC GACCGCGAGAAGCTGCAGGAACGCGTGGCCAAGCTGGCCGGCGGCGTTGCCGTGATCAAG GTCGGTGCCTCGACCGAAATCGAAATGAAGGAAAAGAAGGACCGCGTCGACGACGCCCTG CACGCCACCCGTGCAGCCGTTGAAGAAGGCGTGGTCCCGGGCGGCGGCGTTGCCCTGGTC CGTGCGGTCTCCGCGCTGGCTGGTCTGAAGGGTGCCAACGAAGACCAGAACCACGGCATC CAGATCGCCCTGCGCGCGATGGAAGCCCCGCTGCGCGAGATCGTCGCCAACGCCGGCGAA GAGCCGTCGGTCATCGTCAACAAGGTCAAGGAAGGCACCGGCAGCTTCGGCTACAACGCC GCCACCGGCGAGTTCGGTGACATGCTGCAGTTCGGCATCCTGGACCCGACCAAGGTGACC CGTTCGGCGCTGCAGAACGCAGCTTCGATCGCTGGCCTGATGATCACCACCGAAGCCATG GTTGCCGAAGCTCCGAAGAAGGACGAGCCGGCCATGGGTGGCGCCGGTGGCATGGGCGGC ATGGGTGGCATGGGCGGCATGGACTTCTAA |
Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKDIRFGEDARSRMVRGVNVLANAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEI ELADKFENMGAQMVKEVASRTNDDAGDGTTTATVLAQALIREGAKAVAAGMNPMDLKRGI DKAVVAAVNELKSISKPTADDKAIAQVGTISANSDESIGQIIADAMKEVGKEGVITVEEG SGLDNELDVVKGMQFDRGYLSPYFINNQQSQTADLDDPFILLHDKKISNVRDLLPVLEGV AKAGKPLLIVAEEVEGEALATLVVNTIRGIVKVVAVKAPGFGDRRKAMLEDMAVLTGGTV ISEEVGLSLEKATIKDLGRAKKVQVSKENTTIIDGVGDKAAVDSRVAQIKTQIQDTSSDY DREKLQERVAKLAGGVAVIKVGASTEIEMKEKKDRVDDALHATRAAVEEGVVPGGGVALV RAVSALAGLKGANEDQNHGIQIALRAMEAPLREIVANAGEEPSVIVNKVKEGTGSFGYNA ATGEFGDMLQFGILDPTKVTRSALQNAASIAGLMITTEAMVAEAPKKDEPAMGGAGGMGG MGGMGGMDF |
Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCCACCGTGCTGGCCCAGGCCCTGATCCGCGAAGGTGCCAAGGCTGTTGCCGCCGGCATG AACCCGATGGACCTCAAGCGCGGTATCGACAAGGCCGTCGTGGCCGCCGTCAACGAGCTG AAGAGCATCTCCAAGCCGACCGCTGACGACAAGGCGATCGCCCAGGTCGGCACCATCTCG GCCAACTCGGACGAGTCGATCGGCCAGATCATCGCTGACGCGATGAAGGAAGTCGGCAAG GAAGGCGTGATCACCGTTGAAGAGGGCTCGGGCCTGGACAACGAGCTGGACGTGGTCAAG GGCATGCAGTTCGACCGCGGCTACCTGTCCCCGTACTTCATCAACAACCAGCAGTCGCAG ACCGCTGATCTGGATGACCCGTTCATCCTGCTGCACGACAAGAAGATCTCCAACGTCCGT GACCTGCTGCCGGTGCTGGAAGGCGTCGCCAAGGCCGGCAAGCCGCTGCTGATCGTCGCT GAAGAAGTCGAAGGCGAAGCGCTGGCGACCCTGGTGGTCAACACCATCCGTGGCATCGTC AAGGTCGTGGCCGTC |
Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQALIREGAKAVAAGMNPMDLKRGIDKAVVAAVNELKSISKPTADDKAIAQVGTIS ANSDESIGQIIADAMKEVGKEGVITVEEGSGLDNELDVVKGMQFDRGYLSPYFINNQQSQ TADLDDPFILLHDKKISNVRDLLPVLEGVAKAGKPLLIVAEEVEGEALATLVVNTIRGIV KVVAV |