RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b9554 |
| Chaperonin Group: | I |
| Deposit Date: | 2006-12-04 |
| Type: | ref |
| Type strain?: | yes |
| Genus: | Fervidobacterium |
| Species: | nodosum |
| Strain: | Rt17-B1 |
| Lineage: | root; cellular organisms; Bacteria; Thermotogae; Thermotogae (class); Thermotogales; Thermotogaceae; Fervidobacterium; Fervidobacterium nodosum |
| Original ID: | ATCC 35602 |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | NC_009718 |
| Peptide Genbank Accession: | YP_001411043 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | From complete genome sequence. Type strain synonyms strain Rt17-B1 = ATCC 35602 = DSM 5306. Note LPSN database shows synonym "Rt17-B". |
|
Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAAAGTTATTAAGATACAGTGAAGAAGCAAGAAGGTCATTAGAAGCAGGTGTAGAT GCAGTCGCTAATGCAGTTAAGATTACATTGGGTCCAAAAGGTAGAAATGTTGTTATTGAA AAATCATGGGGCAGCCCAACAATTACAAATGATGGTGTCTCTATAGCAAAAGAAATTGAA TTAGAAGACAAATTTGCAAATCTTGGTGCACAACTTGTTAAAGAAGTTGCAAGCAAGACT AATGATGTTGCTGGTGACGGTACAACAACGGCTACAGTTCTTGCTCAAGCGATGATTAAA GAAGGACTCAAGATGGTAGCAGCTGGCGCAAATCCGATATTGATTAAAAAAGGTATCGAC AAAGCAACATCAAAGGTTGTTGAAGAGATTAAGAAAATTTCAAAGAAACTTTCAAGCACA GAGGATATCGCACACGTCGCATCAATCAGTGCAAATAGTGAAGAAATTGGTAAATTAATC GCAGAAGCAATGGAAAAAGTTGGCGAAGATGGAGTTATCACAGTCGAAGATAGCAAAACA ATTGATACTTACGTTGAATTTACAGAAGGTATGCAATTCGACAGAGGTTACATCTCACCA TACTTTGTAACAGACCCAGAAAAGATGGAAGTCGTTTACAATGAACCATTCATACTCATC ACAGATAGAAAACTTTCAAACGTTAAACCGCTCATCCCTATTCTTGAAAAAGTAGCTCAA ACAGGAAGACCACTTGTAATTATCGCAGAAGATGTTGAAGGTGAAGTTCTCACAACGTTA GTTCTCAACAAACTCAAGGGAACACTTAACACCGTAGCAGTTAAAGCTCCTGGCTTCGGT GACAGAAGAAAAGCAATGTTACAAGATATAGCAATTCTCACAGGTGGTATTGTAGCAAGC GAAGAAGTTGGAATTAACCTCGAAGACCTCACACTCCAAGACCTTGGTAGAGCAGACGTT GTAAGAGTTAAGAAAGACGAAACAATAATTGTCGGCGGAAAAGGCAAGCCAGAAGAAATC AAGAAGAGAGTTGCACAAATCAAAGCACAAATCGAGCAAACAACAAGCGAATACGAAAAA GAAACACTCCAAGAAAGAATGGCAAAATTAGCTGGTGGTGTCGCAGTAATTAAGGTTGGT GCAGCAACAGAAACAGAACTTAAAGAAAAGAAACACAGAATTGAAGACGCACTCAGCGCA ACAAGAGCAGCTGTTGAAGAAGGTATCGTCCCTGGCGGTGGAATTACATTACTTAGAGCA AGAAAAGTTCTTGAACCAGTTCTCAATGAACTTACCGGTGACGAAAAACTCGGTGCTCAA ATAGTCTACAATGCTCTCGAAGCACCAATTAGACAAATCGCTCTCAACGCAGGTTACGAT GGTGCAATAATTATCCACAACGTACTTTCAAAAGATGATGTAGCATACGGTTTTGATGCC CTTAAAGGTGAATACTGTAACATGTACGAACGTGGAATTATCGACCCAGCAAAGGTTACA AGAAGCGCTCTACAAAACGCAGCATCAATTGCGGGTATGCTCCTTACAACAGAAGTGCTC GTAGTTGAAAAACCAGAAGAAAAGAAACCAGCAGCACCTGAAATGCCAGAATATTAA |
|
Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKLLRYSEEARRSLEAGVDAVANAVKITLGPKGRNVVIEKSWGSPTITNDGVSIAKEIE LEDKFANLGAQLVKEVASKTNDVAGDGTTTATVLAQAMIKEGLKMVAAGANPILIKKGID KATSKVVEEIKKISKKLSSTEDIAHVASISANSEEIGKLIAEAMEKVGEDGVITVEDSKT IDTYVEFTEGMQFDRGYISPYFVTDPEKMEVVYNEPFILITDRKLSNVKPLIPILEKVAQ TGRPLVIIAEDVEGEVLTTLVLNKLKGTLNTVAVKAPGFGDRRKAMLQDIAILTGGIVAS EEVGINLEDLTLQDLGRADVVRVKKDETIIVGGKGKPEEIKKRVAQIKAQIEQTTSEYEK ETLQERMAKLAGGVAVIKVGAATETELKEKKHRIEDALSATRAAVEEGIVPGGGITLLRA RKVLEPVLNELTGDEKLGAQIVYNALEAPIRQIALNAGYDGAIIIHNVLSKDDVAYGFDA LKGEYCNMYERGIIDPAKVTRSALQNAASIAGMLLTTEVLVVEKPEEKKPAAPEMPEY |
|
Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCTACAGTTCTTGCTCAAGCGATGATTAAAGAAGGACTCAAGATGGTAGCAGCTGGCGCA AATCCGATATTGATTAAAAAAGGTATCGACAAAGCAACATCAAAGGTTGTTGAAGAGATT AAGAAAATTTCAAAGAAACTTTCAAGCACAGAGGATATCGCACACGTCGCATCAATCAGT GCAAATAGTGAAGAAATTGGTAAATTAATCGCAGAAGCAATGGAAAAAGTTGGCGAAGAT GGAGTTATCACAGTCGAAGATAGCAAAACAATTGATACTTACGTTGAATTTACAGAAGGT ATGCAATTCGACAGAGGTTACATCTCACCATACTTTGTAACAGACCCAGAAAAGATGGAA GTCGTTTACAATGAACCATTCATACTCATCACAGATAGAAAACTTTCAAACGTTAAACCG CTCATCCCTATTCTTGAAAAAGTAGCTCAAACAGGAAGACCACTTGTAATTATCGCAGAA GATGTTGAAGGTGAAGTTCTCACAACGTTAGTTCTCAACAAACTCAAGGGAACACTTAAC ACCGTAGCAGTT |
|
Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAMIKEGLKMVAAGANPILIKKGIDKATSKVVEEIKKISKKLSSTEDIAHVASIS ANSEEIGKLIAEAMEKVGEDGVITVEDSKTIDTYVEFTEGMQFDRGYISPYFVTDPEKME VVYNEPFILITDRKLSNVKPLIPILEKVAQTGRPLVIIAEDVEGEVLTTLVLNKLKGTLN TVAV |