Chaperonin ID: b9327
Chaperonin Group: I
Deposit Date: 2006-08-08
Type: ref
Type strain?: no
Genus: Frankia
Species: alni
Strain: ACN14A
Lineage: root; cellular organisms; Bacteria; Actinobacteria; Actinobacteria (class); Actinobacteridae; Actinomycetales; Frankineae; Frankiaceae; Frankia
Original ID: -
CUTC ID: -
Nucleotide Genbank Accession: CT573213
Peptide Genbank Accession: CAJ59798
Best FASTA Match: -
Date of FASTA search: -
FASTA identity %: -
Best BLASTP Match: -
Date of BLASTP search: -
BLASTP identity %: -
Source: Genbank
Notes: From complete genome sequence. One of four cpn60 genes in this organism. No type strain of this species has been designated as of 2006-08-08.
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB | 		GTGGCCGTCCGGTTTCCGCCGGGCCCGCCGGCGGGGCGCGCCCTTGCGGTTTCCCACCGG
TCATCGGTGTCGGGAGGACAACCAGGTATGCCGAAGATTCTCACGTTCAACGAGGACGCC
CGCCACGCGCTCGAGCGCGGCGTCAACGCGCTGGCCGACGTGGTCAAGGTGACGATCGGC
CCGCGTGGGCGCAACGTCGTCATCGACCAGTCCTACGGCGCGGCGACGATCACCAACGAC
GGGGTGACGATCGCCCGGCTGGTCGAGCTGGAAGACCCGTACGAGAACCTGGGTGCCCAG
CTCGCCAAGGAAGTCGCCACCAAGACCAACGACGTCGCCGGTGACGGCACCACCACCGCG
ACGGTGCTCGCCCAGGCGATGGTCCGTTTCGGTCTGAAGCAGGTCACCGCGGGGGCCGCG
CCGCTGTCGCTGAAGCTGGGCATCGAGGCCGCCGTCGAGGCCGTCTCCGCCGCCCTGCTG
GAGCAGGCGATCGAGGTCAGCTCGAGGCAGACGATCGCCCAGGTCGCCGCCATCTCCGCC
CAGGACACCCAGGTCGGGGAGCTGATCGCCGAGGCGATCGACAAGATCGGCAAGGACGGC
GTCATCACGGTCGAGGAGAGCCAGACCCTCGGGCTGGACCTCGAGCTGACCGAGGGGATG
CAGTTCGACAAGGGCTACATCTCGCCGTACTTCGTCACGGACGCCGACTCGCAGGAGGCC
ATCCTCGAGGACGCGTACGTCCTGCTGTACCCGGGCAAGATCTCGGCGCTGAACGAGATC
CTGCCCATCCTCGAGCAGGTCGTGCAGGAGCGTAAGCCGCTGCTGATCATCGCCGAGGAC
ATCGAGGGCGAGGCGCTGTCCACCCTGGTGGTGAACTCGATCCGCAAGACCTTCCAGGTC
GTCGCGGTGAAGGCGCCCGGCTTCGGGGACCGCCGCAAGGCGCTGCTGCAGGACATCGCC
GTACTCACCGGCGGCCAGGTGGTGGCCGGCGAGGTCGGGCTCTCGCTCGACGCGGTGACC
CTCGCGGACCTCGGCCGGGCCCGGCGCGTCGTGGTGGACAAGGAGAACACCACCATCGTC
GACGGCGGCGGCGAGGCCGACGCGGTCGCCGACCGGGTGCGCCAGCTCAAGGCGGAGATC
GAGACCAGCGACTCCGACTGGGACCGCGAGAAGCTCCAGGAGCGGCTCGCCAAGCTCGCC
GGCGGGGTCGCGGTCATCCGCGTGGGTGCCGCCACCGAGGTGGAGCTCAAGGAGAAGAAG
CACCGCCTCGAGGACGCCGTCTCGGCGACCCGCGCGGCGATCGAGGAGGGCATCGTCGCC
GGCGGCGGCGCGGCCCTGGCGCACGTCACCTCCGTCCTCGACGACGGCCTCGGCCGCACC
GGGGACGAGCTCGCCGGTGTCCGGATCGTGCGTACGGCCCTCGACGCCCCGCTGAACTGG
ATCGCGCGCAACGCGGGTCTGGAGGGCGCGGTCATCGTCGCCAGGGTCAAGGACCTCGCA
CCGGGTCACGGCTACAACGCCGCGACCGGGGAGTACACCGACCTGATCGCGGCCGGAGTC
ATCGACCCGGTCAAGGTCACCCGTTCGGCGGTGGCGAACGCCGCCTCGATCGCGGCGTTG
CTCATCACCACGGAGAGCCTCGTCGTCGAGAAGCCGGCGGTGTCCGACGGCGACCATGGG
CACTCCCACGGTCACGGCCACAGCCACGGGCACAGCCACCCGCAGGGCCCCGGTTTCTGA
Full Peptide Sequence:
BLAST this sequence:
cpnDB | 		MAVRFPPGPPAGRALAVSHRSSVSGGQPGMPKILTFNEDARHALERGVNALADVVKVTIG
PRGRNVVIDQSYGAATITNDGVTIARLVELEDPYENLGAQLAKEVATKTNDVAGDGTTTA
TVLAQAMVRFGLKQVTAGAAPLSLKLGIEAAVEAVSAALLEQAIEVSSRQTIAQVAAISA
QDTQVGELIAEAIDKIGKDGVITVEESQTLGLDLELTEGMQFDKGYISPYFVTDADSQEA
ILEDAYVLLYPGKISALNEILPILEQVVQERKPLLIIAEDIEGEALSTLVVNSIRKTFQV
VAVKAPGFGDRRKALLQDIAVLTGGQVVAGEVGLSLDAVTLADLGRARRVVVDKENTTIV
DGGGEADAVADRVRQLKAEIETSDSDWDREKLQERLAKLAGGVAVIRVGAATEVELKEKK
HRLEDAVSATRAAIEEGIVAGGGAALAHVTSVLDDGLGRTGDELAGVRIVRTALDAPLNW
IARNAGLEGAVIVARVKDLAPGHGYNAATGEYTDLIAAGVIDPVKVTRSAVANAASIAAL
LITTESLVVEKPAVSDGDHGHSHGHGHSHGHSHPQGPGF
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB | 		GCGACGGTGCTCGCCCAGGCGATGGTCCGTTTCGGTCTGAAGCAGGTCACCGCGGGGGCC
GCGCCGCTGTCGCTGAAGCTGGGCATCGAGGCCGCCGTCGAGGCCGTCTCCGCCGCCCTG
CTGGAGCAGGCGATCGAGGTCAGCTCGAGGCAGACGATCGCCCAGGTCGCCGCCATCTCC
GCCCAGGACACCCAGGTCGGGGAGCTGATCGCCGAGGCGATCGACAAGATCGGCAAGGAC
GGCGTCATCACGGTCGAGGAGAGCCAGACCCTCGGGCTGGACCTCGAGCTGACCGAGGGG
ATGCAGTTCGACAAGGGCTACATCTCGCCGTACTTCGTCACGGACGCCGACTCGCAGGAG
GCCATCCTCGAGGACGCGTACGTCCTGCTGTACCCGGGCAAGATCTCGGCGCTGAACGAG
ATCCTGCCCATCCTCGAGCAGGTCGTGCAGGAGCGTAAGCCGCTGCTGATCATCGCCGAG
GACATCGAGGGCGAGGCGCTGTCCACCCTGGTGGTGAACTCGATCCGCAAGACCTTCCAG
GTCGTCGCGGTG
Peptide UT Sequence:
BLAST this sequence:
cpnDB | 		ATVLAQAMVRFGLKQVTAGAAPLSLKLGIEAAVEAVSAALLEQAIEVSSRQTIAQVAAIS
AQDTQVGELIAEAIDKIGKDGVITVEESQTLGLDLELTEGMQFDKGYISPYFVTDADSQE
AILEDAYVLLYPGKISALNEILPILEQVVQERKPLLIIAEDIEGEALSTLVVNSIRKTFQ
VVAV