RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b7802 |
| Chaperonin Group: | I |
| Deposit Date: | 2005-11-21 |
| Type: | ref |
| Type strain?: | no |
| Genus: | Mycobacterium |
| Species: | tuberculosis |
| Strain: | C |
| Lineage: | root; cellular organisms; Bacteria; Actinobacteria; Actinobacteria (class); Actinobacteridae; Actinomycetales; Corynebacterineae; Mycobacteriaceae; Mycobacterium |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | NZ_AAKR01000150 |
| Peptide Genbank Accession: | ZP_00876482 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | From complete genome sequence. From the Broad Institute Genome Sequencing Platform database: "The C strain has been highly transmitted in New York City. In one study this strain was found to be more common among injection drug users and resistant to reactive nitrogen intermediates. (Friedman et al. J Infect Dis. 1997 Aug;176(2):478-84.)". |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGAGCAAGCTGATCGAATACGACGAAACCGCGCGTCGCGCCATGGAGGTCGGCATGGAC AAGCTGGCCGACACCGTGCGGGTGACGCTGGGGCCGCGCGGCCGGCATGTGGTGCTGGCC AAGGCGTTTGGCGGACCCACGGTTACCAACGACGGCGTCACGGTGGCACGTGAGATCGAG CTGGAAGATCCGTTTGAAGACTTGGGCGCCCAGCTGGTGAAGTCGGTGGCCACCAAGACC AACGATGTGGCCGGTGACGGCACCACCACCGCAACCATCTTGGCGCAGGCACTGATCAAG GGCGGCCTGAGGCTAGTGGCCGCCGGCGTCAACCCGATCGCGCTCGGCGTGGGAATCGGC AAGGCCGCCGACGCGGTATCCGAGGCGCTGCTGGCATCGGCCACGCCGGTGTCCGGCAAG ACCGGCATCGCGCAGGTGGCGACGGTGTCCTCGCGCGACGAGCAGATCGGTGACCTGGTT GGCGAAGCGATGAGCAAGGTCGGCCACGACGGCGTGGTCAGCGTCGAAGAATCCTCGACG CTGGGCACCGAGTTGGAGTTCACCGAGGGTATCGGCTTCGACAAGGGCTTCTTGTCGGCA TACTTCGTTACCGACTTCGATAACCAGCAGGCGGTGCTCGAGGACGCGTTGATCCTGCTG CACCAAGACAAGATCAGCTCGCTTCCCGATCTGTTGCCATTGCTGGAAAAGGTTGCAGGA ACGGGTAAGCCACTACTGATCGTGGCTGAAGACGTGGAGGGCGAAGCGTTGGCGACGCTG GTCGTCAACGCGATTCGCAAGACGTTGAAAGCGGTCGCGGTCAAGGGGCCGTACTTCGGT GACCGCCGTAAGGCGTTCCTTGAGGACCTGGCGGTGGTGACGGGTGGCCAGGTGGTCAAC CCCGACGCCGGCATGGTGCTGCGCGAGGTGGGCTTGGAGGTGCTGGGCTCGGCCCGACGC GTGGTGGTCAGCAAGGACGACACGGTCATTGTCGACGGCGGCGGCACCGCAGAAGCGGTG GCCAACCGGGCGAAGCACTTGCGTGCCGAGATCGACAAGAGCGATTCGGATTGGGATCGG GAAAAGCTTGGCGAGCGGCTGGCCAAACTGGCCGGCGGGGTTGCTGTCATCAAGGTGGGT GCCGCCACCGAGACCGCACTCAAGGAGCGCAAGGAAAGCGTCGAGGATGCGGTCGCGGCC GCCAAGGCCGCGGTCGAGGAGGGCATCGTCCCTGGTGGGGGAGCCTCGCTCATCCACCAG GCCCGCAAGGCGCTGACCGAACTGCGTGCGTCGCTGACCGGTGACGAGGTCCTCGGTGTC GACGTGTTCTCCGAAGCCCTTGCCGCGCCGTTGTTCTGGATCGCCGCCAACGCTGGCTTG GACGGCTCGGTGGTGGTCAACAAGGTCAGCGAGCTACCCGCCGGGCATGGGCTGAACGTG AACACCCTGAGCTATGGTGACTTGGCCGCTGACGGCGTCATCGACCCGGTCAAGGTGACT AGGTCGGCGGTGTTGAACGCGTCATCGGTTGCCCGGATGGTACTCACCACCGAGACGGTC GTGGTCGACAAGCCGGCCAAGGCAGAAGATCACGACCATCACCACGGGCACGCGCACTGA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MSKLIEYDETARRAMEVGMDKLADTVRVTLGPRGRHVVLAKAFGGPTVTNDGVTVAREIE LEDPFEDLGAQLVKSVATKTNDVAGDGTTTATILAQALIKGGLRLVAAGVNPIALGVGIG KAADAVSEALLASATPVSGKTGIAQVATVSSRDEQIGDLVGEAMSKVGHDGVVSVEESST LGTELEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAG TGKPLLIVAEDVEGEALATLVVNAIRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVN PDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANRAKHLRAEIDKSDSDWDR EKLGERLAKLAGGVAVIKVGAATETALKERKESVEDAVAAAKAAVEEGIVPGGGASLIHQ ARKALTELRASLTGDEVLGVDVFSEALAAPLFWIAANAGLDGSVVVNKVSELPAGHGLNV NTLSYGDLAADGVIDPVKVTRSAVLNASSVARMVLTTETVVVDKPAKAEDHDHHHGHAH |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACCATCTTGGCGCAGGCACTGATCAAGGGCGGCCTGAGGCTAGTGGCCGCCGGCGTC AACCCGATCGCGCTCGGCGTGGGAATCGGCAAGGCCGCCGACGCGGTATCCGAGGCGCTG CTGGCATCGGCCACGCCGGTGTCCGGCAAGACCGGCATCGCGCAGGTGGCGACGGTGTCC TCGCGCGACGAGCAGATCGGTGACCTGGTTGGCGAAGCGATGAGCAAGGTCGGCCACGAC GGCGTGGTCAGCGTCGAAGAATCCTCGACGCTGGGCACCGAGTTGGAGTTCACCGAGGGT ATCGGCTTCGACAAGGGCTTCTTGTCGGCATACTTCGTTACCGACTTCGATAACCAGCAG GCGGTGCTCGAGGACGCGTTGATCCTGCTGCACCAAGACAAGATCAGCTCGCTTCCCGAT CTGTTGCCATTGCTGGAAAAGGTTGCAGGAACGGGTAAGCCACTACTGATCGTGGCTGAA GACGTGGAGGGCGAAGCGTTGGCGACGCTGGTCGTCAACGCGATTCGCAAGACGTTGAAA GCGGTCGCGGTC |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATILAQALIKGGLRLVAAGVNPIALGVGIGKAADAVSEALLASATPVSGKTGIAQVATVS SRDEQIGDLVGEAMSKVGHDGVVSVEESSTLGTELEFTEGIGFDKGFLSAYFVTDFDNQQ AVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVNAIRKTLK AVAV |