Chaperonin ID: b7212
Chaperonin Group: I
Deposit Date: 2003-08-12
Type: ref
Type strain?: no
Genus: Arabidopsis
Species: thaliana
Strain: Columbia
Lineage: root; cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; eurosids II; Brassicales; Brassicaceae; Arabidopsis
Original ID: -
CUTC ID: -
Nucleotide Genbank Accession: NM_121887
Peptide Genbank Accession: NP_197383
Best FASTA Match: -
Date of FASTA search: -
FASTA identity %: -
Best BLASTP Match: -
Date of BLASTP search: -
BLASTP identity %: -
Source: Genbank
Notes: chloroplast cpn60 alpha
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB | 		ATGTTCGCCGTATCACCGTCGTCATTCTCGCCGACAACCATTTCTCCGCGCCGTAGTGGA
CAGAGGAACGAACCTCGAAAATTCTCGGTGGTGAGAGCTGGAGCTAAGAGAATACTATAC
GGTAAAGATAGCAGAGAGAAACTCCAAGCCGGAATCGATAAGTTAGCTGATGCTGTTTCC
ATCACCTTAGGCCCTAGAGGGCGTAATGTAGTGCTTGCTGAAAAAGATACAATCAAAGTG
ATTAACGATGGTGTCACCATTGCTAAATCTATTGAGCTTCCTGACACTATTGAGAACGCT
GGAGCAACATTAATCCAAGAGGTTGCGATTAAAATGAACGAATCAGCGGGTGACGGGACA
ACCACTGCAATCATTTTGGCTAGAGAAATGATCAAAGCTGGTTCTTTGGCTATTGCTTTT
GGAGCTAATGCTGTTTCTGTGAAGAATGGAATGAATAAGACTGTTAAAGAGTTGGTCAGG
GTGTTGCAGATGAAAAGTATTCCTGTTCAAGGGAAGAATGATATTAAAGCTGTGGCTTCA
ATCTCTGCTGGTAACGATGAATTTGTGGGGAATTTGATTGCTGAGACTGTGGAAAAGATT
GGCCCTGATGGTGTCATCTCCATTGAATCATCTTCCACTTCAGAAACGTCTGTTATAGTT
GAGGAAGGAATGAAGTTTGACAAGGGCTATATGTCGCCTCATTTCATCACAAATCAGGAG
AAATCTACGGTGGAATTCGACAAAGCTAAAATTCTTGTGACGGATCAGAAAATCACTTCA
GCCAAAGAATTAGTTCCGTTACTGGAGAAAACCTCACAACTGAGTGTTCCGCTCCTTATA
ATTGCAGAAGATATCTCTGCGGAAGTGCTTGAGATACTGGTGGTGAACAAGAAGCAAGGT
TTGATCAATGTCGCAGTTGTGAAATGTCCAGGAATGTTGGATGGGAAAAAGGCTTTGCTA
CAAGACATTGCACTCATGACAGGAGCTGATTATCTTTCCGGAGATTTAGGCATGTCGCTC
ATGGGTGCAACTTCAGATCAGCTGGGTGTTTCTCGTAGAGTAGTAATTACAGCTAATTCA
ACAACTATAGTCGCAGACGCTTCTACTAAACCAGAGATTCAGGCAAGAATTGCTCAGATG
AAGAAGGATCTAGCTGAGACAGATAATTCATATCTTTCAAAAAAAATAGCAGAGAGAATT
GCTAAGCTCACAGGAGGCGTGGCTGTAATAAAGGTTGGAGGCCACACTGAAACAGAACTT
GAGGACAGAAAACTAAGAATAGAGGACGCGAAGAATGCTACATTTGCAGCCATGAGAGAA
GGTATAGTTCCAGGTGGTGGTGCTACTTATATCCATCTTTTAGATGAGATACCGAGAATC
AAGAAGAATCTAATGGAAGATTCATACGAACAAATAGGTGCAGATATTGTAGCAATGGCA
CTCACTGCACCTGCAATGGCCATAGCAACCAATGCTGGGGTTGATGGATCAGTTGTGGTG
CAGAAAACCAGAGAACTCGAATGGAGAAGTGGTTACAACGCAATGTCTGGAAAGTATGAG
GATCTTCTAAACGCTGGAATCGCAGATCCTTGTCGGGTTTCAAGATTCGCCCTTCAAAAC
GCAGTTTCCGTTGCCGGCATTATTCTCACAACTCAAGCAGTACTCGTGGAGAAGATCAAG
CAACCTAAACCTGCTGTTCCTCAAGTTCCTGGCATACCCACATCATAA
Full Peptide Sequence:
BLAST this sequence:
cpnDB | 		MFAVSPSSFSPTTISPRRSGQRNEPRKFSVVRAGAKRILYGKDSREKLQAGIDKLADAVS
ITLGPRGRNVVLAEKDTIKVINDGVTIAKSIELPDTIENAGATLIQEVAIKMNESAGDGT
TTAIILAREMIKAGSLAIAFGANAVSVKNGMNKTVKELVRVLQMKSIPVQGKNDIKAVAS
ISAGNDEFVGNLIAETVEKIGPDGVISIESSSTSETSVIVEEGMKFDKGYMSPHFITNQE
KSTVEFDKAKILVTDQKITSAKELVPLLEKTSQLSVPLLIIAEDISAEVLEILVVNKKQG
LINVAVVKCPGMLDGKKALLQDIALMTGADYLSGDLGMSLMGATSDQLGVSRRVVITANS
TTIVADASTKPEIQARIAQMKKDLAETDNSYLSKKIAERIAKLTGGVAVIKVGGHTETEL
EDRKLRIEDAKNATFAAMREGIVPGGGATYIHLLDEIPRIKKNLMEDSYEQIGADIVAMA
LTAPAMAIATNAGVDGSVVVQKTRELEWRSGYNAMSGKYEDLLNAGIADPCRVSRFALQN
AVSVAGIILTTQAVLVEKIKQPKPAVPQVPGIPTS
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB | 		GCAATCATTTTGGCTAGAGAAATGATCAAAGCTGGTTCTTTGGCTATTGCTTTTGGAGCT
AATGCTGTTTCTGTGAAGAATGGAATGAATAAGACTGTTAAAGAGTTGGTCAGGGTGTTG
CAGATGAAAAGTATTCCTGTTCAAGGGAAGAATGATATTAAAGCTGTGGCTTCAATCTCT
GCTGGTAACGATGAATTTGTGGGGAATTTGATTGCTGAGACTGTGGAAAAGATTGGCCCT
GATGGTGTCATCTCCATTGAATCATCTTCCACTTCAGAAACGTCTGTTATAGTTGAGGAA
GGAATGAAGTTTGACAAGGGCTATATGTCGCCTCATTTCATCACAAATCAGGAGAAATCT
ACGGTGGAATTCGACAAAGCTAAAATTCTTGTGACGGATCAGAAAATCACTTCAGCCAAA
GAATTAGTTCCGTTACTGGAGAAAACCTCACAACTGAGTGTTCCGCTCCTTATAATTGCA
GAAGATATCTCTGCGGAAGTGCTTGAGATACTGGTGGTGAACAAGAAGCAAGGTTTGATC
AATGTCGCAGTTGTG
Peptide UT Sequence:
BLAST this sequence:
cpnDB | 		AIILAREMIKAGSLAIAFGANAVSVKNGMNKTVKELVRVLQMKSIPVQGKNDIKAVASIS
AGNDEFVGNLIAETVEKIGPDGVISIESSSTSETSVIVEEGMKFDKGYMSPHFITNQEKS
TVEFDKAKILVTDQKITSAKELVPLLEKTSQLSVPLLIIAEDISAEVLEILVVNKKQGLI
NVAVV