RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b4417 |
| Chaperonin Group: | I |
| Deposit Date: | 2003-10-03 |
| Type: | ref |
| Type strain?: | no |
| Genus: | Trichodesmium |
| Species: | erythraeum |
| Strain: | IMS101 |
| Lineage: | root; cellular organisms; Bacteria; Cyanobacteria; Oscillatoriales |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | CP000393 |
| Peptide Genbank Accession: | ABG49753 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | From whole genome sequence. One of two cpn60 genes in this organism. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCTAAAATTGTAGAATTTGATGATAAGTCCAGACGCTCTCTAGAACGAGGTATCAAT ACTCTAGCTGATGCGGTCAGAATTACTATGGGCCCAAAGGGTAGAAATGTATTACTAGAG AAAAAATATGGCGCTCCCCAAATTGTTAATGATGGTATTACAGTAGCTAAGGATATTGAA CTGGAAGACCCTCTAGAAAACACTGGGGCTAAATTAATTCAAGAAGTGGCGTCTAAAACT AAGGATATTGCTGGAGATGGCACAACTACAGCTACTGTTTTAGCTCAGTCTATGATTAAA GAAGGCCTCAAAAACGTAGCTGCTGGTGCGAACCCAGTGGCAGTTCGTAGAGGGATTGAG AAAACTGTTAGTCTGCTAGTGAAAGAAATACAAACAGTTGCTAAACCGGTAGAGGGAGAA GCGATCGCTCAAGTTGCTACGGTATCTGCAGGTGGTGATGCAGAGGTAGGCAGAATGATT TCTGAGGCCATGGATAAAGTTACCAAGGATGGGGTAATTACTGTTGAAGAGTCTAAGTCT CTTTCTACAGACTTAGAGGTTGTGGAAGGAATGCAAATTGATCGCGGTTATCTTTCTCCT TATTTTGTGACTGATCAAGAACGGTTAGTAGTCGACTTTGAAAATGCTCGCATCTTAATT ACTGATAAGAAAATCTCTTCTATTCAAGATTTGGTACCGGTACTGGAAAAAGTTGCTCGT GCTGGTCAGTCTTTATTAATTATTGCTGAGGATATTGAAGGGGAAGCTTTAGCTACTTTG GTGGTTAATAAAGCAAGGGGTGTACTGAATGTTGCTGCAGTGAAGGCTCCTGGTTTTGGC GATCGCCGTAAGGCAATGCTCCAAGATATTGCTATTCTCACGGGTGGTCAACTCATCTCG GAAGAGGTTGGTCTGAGTCTAGAGATGGTAGACCTAGATATGATGGGTATTGGTCGCAAA ATTTCTATTAACAAGGATAACACAACTATTGTTGCTGATGGGGGAACGGCTGAGGAAGTT AAAAAGCGGATCGCTCAAATTCGCAAACAGCTTGGTGAAAGCGACTCTGATTATGATAAA GAAAAGTTACAAGAGCGCATTGCTAAGTTAGCTGGTGGGGTGGCAGTCATTAAGGTTGGT GCTGCTACTGAAACTGAGCTTAAAGACCGGAAGTTACGCATTGAGGATGCTTTGAATGCG ACAAAGGCTGCTGTAGAGGAGGGTATTGTCCCTGGTGGCGGTACTACTTTGATTCACTTG TCTACTAAAGTGGAGGAGCTAAAAGGTAGTCTCAATAATGAAGAAGAGAAAATTGGTGCT GATATTGTTAGACGTGCTTTAGAAGCACCTTTAAATCAAATTGCTAATAACTCTGGTGTA GAGGGTTCGGTAATTGTAGAAAAAGTACGTTCTACTGATTTTAGTGTTGGTTACAATGTG ATAACTGGCGAGTACGAAGATCTGATTGCTGCTGGTATTCTTGACCCGGCGATGGTGGTA CGTTCTGCGTTGCAAAATGCGGGTTCTATTGCTGGTATGGTCTTAACTACTGAGGCTGTG GTTGTTGAGAAGCCTGAGAAGAAAGGTGCTGCTCCTGATATGGATGGCGGCATGGGCGGC ATGGGCGGCATGGGCGGCATGGGCGGCATGGGCGGCATGGGTATGCCTGGTATGGGAATG ATGTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKIVEFDDKSRRSLERGINTLADAVRITMGPKGRNVLLEKKYGAPQIVNDGITVAKDIE LEDPLENTGAKLIQEVASKTKDIAGDGTTTATVLAQSMIKEGLKNVAAGANPVAVRRGIE KTVSLLVKEIQTVAKPVEGEAIAQVATVSAGGDAEVGRMISEAMDKVTKDGVITVEESKS LSTDLEVVEGMQIDRGYLSPYFVTDQERLVVDFENARILITDKKISSIQDLVPVLEKVAR AGQSLLIIAEDIEGEALATLVVNKARGVLNVAAVKAPGFGDRRKAMLQDIAILTGGQLIS EEVGLSLEMVDLDMMGIGRKISINKDNTTIVADGGTAEEVKKRIAQIRKQLGESDSDYDK EKLQERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATKAAVEEGIVPGGGTTLIHL STKVEELKGSLNNEEEKIGADIVRRALEAPLNQIANNSGVEGSVIVEKVRSTDFSVGYNV ITGEYEDLIAAGILDPAMVVRSALQNAGSIAGMVLTTEAVVVEKPEKKGAAPDMDGGMGG MGGMGGMGGMGGMGMPGMGMM |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCTACTGTTTTAGCTCAGTCTATGATTAAAGAAGGCCTCAAAAACGTAGCTGCTGGTGCG AACCCAGTGGCAGTTCGTAGAGGGATTGAGAAAACTGTTAGTCTGCTAGTGAAAGAAATA CAAACAGTTGCTAAACCGGTAGAGGGAGAAGCGATCGCTCAAGTTGCTACGGTATCTGCA GGTGGTGATGCAGAGGTAGGCAGAATGATTTCTGAGGCCATGGATAAAGTTACCAAGGAT GGGGTAATTACTGTTGAAGAGTCTAAGTCTCTTTCTACAGACTTAGAGGTTGTGGAAGGA ATGCAAATTGATCGCGGTTATCTTTCTCCTTATTTTGTGACTGATCAAGAACGGTTAGTA GTCGACTTTGAAAATGCTCGCATCTTAATTACTGATAAGAAAATCTCTTCTATTCAAGAT TTGGTACCGGTACTGGAAAAAGTTGCTCGTGCTGGTCAGTCTTTATTAATTATTGCTGAG GATATTGAAGGGGAAGCTTTAGCTACTTTGGTGGTTAATAAAGCAAGGGGTGTACTGAAT GTTGCTGCAGTG |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQSMIKEGLKNVAAGANPVAVRRGIEKTVSLLVKEIQTVAKPVEGEAIAQVATVSA GGDAEVGRMISEAMDKVTKDGVITVEESKSLSTDLEVVEGMQIDRGYLSPYFVTDQERLV VDFENARILITDKKISSIQDLVPVLEKVARAGQSLLIIAEDIEGEALATLVVNKARGVLN VAAV |