Chaperonin ID: b34016
Chaperonin Group: I
Deposit Date: 2019-05-10
Type: ref
Type strain?: yes
Genus: Saccharothrix
Species: variisporea
Strain: DSM 43911
Lineage: root; cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix
Original ID: -
CUTC ID: -
Nucleotide Genbank Accession: NZ_RBXR01000001
Peptide Genbank Accession: WP_121223450
Best FASTA Match: -
Date of FASTA search: -
FASTA identity %: -
Best BLASTP Match: -
Date of BLASTP search: -
BLASTP identity %: -
Source: Genbank
Notes: Type strain synonyms ATCC 31203= DSM 43911 = JCM 3273 = NBRC 14104 = NRRL B-16296.
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB | 		ATGGCCAAGATGATCGCGTTCGACGAGGACGCCCGCCGCGGTCTCGAGCGTGGCATGAAC
ACCCTCGCCGACGCCGTCAAGGTGACGCTGGGCCCGAAGGGCCGCAACGTCGTGCTCGAG
AAGAAGTGGGGCGCGCCGACCATCACCAACGACGGCGTCTCGATCGCCAAGGAGATCGAG
CTCGAGGACCCGTGGGAGAAGATCGGGGCCGAGCTCGTCAAGGAAGTGGCGAAGAAGACC
GACGACGTCGCCGGTGACGGCACGACGACCGCCACGGTGCTCGCCCAGGCGCTGGTCCGC
GAGGGCCTGCGCAACGTGGCCGCCGGCGCCAACCCGCTGGGCCTCAAGCGCGGCATCGAG
CAGGCCGTCGAGGCCGTGACCGAGCAGCTGCTCAAGACCGCCAAGGAGGTCGAGACCAAG
GAGCAGATCGCCGCCACGGCGTCCATCTCCGCGGGCGACTCGACCATCGGCGAGCTGATC
GCCGAGGCCATGGACAAGGTCGGCAAGGAAGGCGTCATCACGGTCGAGGAGAGCAACGCG
CTCGGCCTCGAGCTCGAGCTGACCGAGGGCATGCGGTTCGACAAGGGCTACATCTCGGGC
TACTTCGTCACCGACCCGGAGCGCCAGGAAGCGGTCCTCGAGGACCCGTACATCCTGCTC
TACGGCTCCAAGATCTCGTCGGTCAAGGACCTGCTCCCGCTGCTGGAGAAGGTCATGCAG
TCCGGCAAGCCGCTGCTGATCATCTCCGAGGACGTCGAGGGCGAGGCCCTGGCGACCCTG
GTGGTCAACAAGATCCGCGGCACCTTCAAGTCCGTCGCCGTCAAGGCCCCGGGCTTCGGC
GACCGCCGCAAGGCCATCCTGCAGGACATCGCGATCCTGACCGGCGGCCAGGTCATCACC
GAGGACGTCGGCCTCAAGCTGGAGAACGCCGACCTGTCCCTGCTGGGCAAGGCCCGCAAG
GTCGTCGTGACCAAGGACGAGACCACGGTCGTCGAGGGCGCGGGTGACGCCGAGCAGATC
CAGGGCCGCGTCAACCAGATCCGGGCCGAGATCGAGAAGTCGGACTCCGACTACGACCGC
GAGAAGCTCCAGGAGCGCCTGGCGAAGCTCGCCGGCGGCGTGGCGGTCATCAAGGCCGGC
GCGGCGACCGAGGTCGAGCTGAAGGAGCGCAAGCACCGCATCGAGGACGCGGTCCGCAAC
GCCAAGGCCGCCGTCGAGGAGGGCATCGTCGCCGGTGGTGGCGTCGCGCTGCTGCAGGCC
GCCGAGGCCGCCTTCGCGGGCCTGAAGCTGGAGGGCGACGAGGCCACTGGCGCCAACATC
GTCAAGGTCGCCGTCGAGGCTCCGCTCAAGCAGATCGCCGTCAACGCCGGCCTCGAGGGC
GGCGTCGTGGTGGAGAAGGTCAAGGGCCTGCCCGTCGGCCACGGCCTCAACGCCGCGACC
GGCGTGTACGAGGACCTGCTCGCGGCCGGCGTCCCGGACCCGACCAAGGTCACCCGCTCG
GCCCTGCAGAACGCGGCCTCCATCGCCGCGCTGTTCCTGACCACCGAGGCCGTCGTGGCC
GACAAGCCGGAGAAGTCCTCCGGTGCGCCGGCCGTGCCGGACGCGGGCGGCATGGACTTC
TGA
Full Peptide Sequence:
BLAST this sequence:
cpnDB | 		MAKMIAFDEDARRGLERGMNTLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPWEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIE
QAVEAVTEQLLKTAKEVETKEQIAATASISAGDSTIGELIAEAMDKVGKEGVITVEESNA
LGLELELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLYGSKISSVKDLLPLLEKVMQ
SGKPLLIISEDVEGEALATLVVNKIRGTFKSVAVKAPGFGDRRKAILQDIAILTGGQVIT
EDVGLKLENADLSLLGKARKVVVTKDETTVVEGAGDAEQIQGRVNQIRAEIEKSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQA
AEAAFAGLKLEGDEATGANIVKVAVEAPLKQIAVNAGLEGGVVVEKVKGLPVGHGLNAAT
GVYEDLLAAGVPDPTKVTRSALQNAASIAALFLTTEAVVADKPEKSSGAPAVPDAGGMDF
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB | 		GCCACGGTGCTCGCCCAGGCGCTGGTCCGCGAGGGCCTGCGCAACGTGGCCGCCGGCGCC
AACCCGCTGGGCCTCAAGCGCGGCATCGAGCAGGCCGTCGAGGCCGTGACCGAGCAGCTG
CTCAAGACCGCCAAGGAGGTCGAGACCAAGGAGCAGATCGCCGCCACGGCGTCCATCTCC
GCGGGCGACTCGACCATCGGCGAGCTGATCGCCGAGGCCATGGACAAGGTCGGCAAGGAA
GGCGTCATCACGGTCGAGGAGAGCAACGCGCTCGGCCTCGAGCTCGAGCTGACCGAGGGC
ATGCGGTTCGACAAGGGCTACATCTCGGGCTACTTCGTCACCGACCCGGAGCGCCAGGAA
GCGGTCCTCGAGGACCCGTACATCCTGCTCTACGGCTCCAAGATCTCGTCGGTCAAGGAC
CTGCTCCCGCTGCTGGAGAAGGTCATGCAGTCCGGCAAGCCGCTGCTGATCATCTCCGAG
GACGTCGAGGGCGAGGCCCTGGCGACCCTGGTGGTCAACAAGATCCGCGGCACCTTCAAG
TCCGTCGCCGTC
Peptide UT Sequence:
BLAST this sequence:
cpnDB | 		ATVLAQALVREGLRNVAAGANPLGLKRGIEQAVEAVTEQLLKTAKEVETKEQIAATASIS
AGDSTIGELIAEAMDKVGKEGVITVEESNALGLELELTEGMRFDKGYISGYFVTDPERQE
AVLEDPYILLYGSKISSVKDLLPLLEKVMQSGKPLLIISEDVEGEALATLVVNKIRGTFK
SVAV