RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b31589 |
| Chaperonin Group: | I |
| Deposit Date: | 2018-05-30 |
| Type: | ref |
| Type strain?: | no |
| Genus: | Candidatus Phytoplasma |
| Species: | oryzae |
| Strain: | Mbita1 |
| Lineage: | root; cellular organisms; Bacteria; Terrabacteria group; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Candidatus Phytoplasma; 16SrXI (Rice yellow dwarf group) |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | NZ_LTBM01000001 |
| Peptide Genbank Accession: | WP_066539945 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | - |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCTAAACAAATTATTTTTGGTAAAGAAGCTAGAAAAGAAATTTTAAAAGGAATAGAT ATACTAGCTAATACAGTAGGAATAACATTAGGTCCTAAGGGTAGTAACGTTATTTTAGAA AAAAATTTTGAAAATCCTTCTATTATTAATGATGGTGTTTCGATAGCTAAAGAAATAGAA TTAAAAAATCCTTATCAAAATATGGGTGCCAAATTAATTTACGAGGCAGCAAGCAGAACT AATGATAACGCAGGTGATGGTACAACTACAGCAACTGTTTTAGCACAAAAAATGATTCAT AAAGGATTTAAATATATTAATTCCGGCGCTAAATCAATATCAGTAAAAGAAGGTATTTTA AAAGCATCAAAGGCAGTATGTGAAGAATTAATAAAAAAATCTAAATCAGTTACAACACAA GATGAAATTGAAAATATAGCAACTATTTCTTCAGGTGATAAAGAAATAGGTAAAATGATT GCTGATGCCATGAAAAAAGTAACTAAAAACGGTGTTATTAATGTTGATGAATCTAAAGGA TTTGAAACTGAGTTAGAAGTAGTGCAAGGAATGCAATATGACAAAGGTTATGTTTCACCT CATTTTGTAACTAATAAAGAAAATATGTCAGTAGAATTAGAACAAACTTCTGTTTTAGTA ACTGATCATAAAATCAATAATATTCATGAAATACGTCCTTTATTAGAAGATATAATCAAA AATTCAACTCCTTTGCTTATTATTGCGGATTCATTTGAAAATGATTTAATTAGTACTTTA ATATTTAATAAAATCAGTGGAGTGTTTAATGTAGTAGCTACCAATGCTCCAGGTTTCGGT GATAATCAAAAAGAATTATTACAAGATATCGCTATTTTAACAAAAGCTACTTTTATATCA AAAGATTTAAACATGAAATTAAAAGATGTTAAATCAGAACATTTAGGAAAAATAAGCAAA GCTATTATTAAAAAAGATAATACTATCTTAATTAGTGATAATAAAAATGAACAACAAATC CAAGACAGAATTCAAGAAATAAAAGGCCAAATTAAACAAAACAATAATGATCCAGAAAAC AAAATTTTAAAAGAACGTTTAGCTAAATTATCAGGAGGAATCGCTGTTATTAAAGTAGGA GCTTCGACAGAAACTGAATTAAAAGAAAAAAAATTAAGAATAGAAGATGCTTTAAACGCA ACTCAAGCAGCTATTACAGAAGGTATCGTTGTAGGTGGAGGTAAAGCTTTAGTTGAAATT TATAAAATTTTAAAAGAAAAATTGAAAGATTCTAATCATGATGTACAAAAAGGTATTAAT ATAGTATTAAATAGTTTATTAGTTCCCACTTATCAAATTGCTGAAAATGCAGGATTTGAT GGGGAAACAATTCTTCAAAAACAACTAAAACAAAAAGAAAATTTTGGTTTTAATGCTGAA AAAGGAGAATATGTAAATTTAATCGAAGAAGGGATTATAGACCCAACTAAGGTAACTAGA CAAGCGGTAGTTAATTCATCTTCTATAGCTTCTATTGTTATTACCACTGGTGCAGCAGTA GTATCGATTCCAGAAAAAAATAGTTCTGATTCTATAAATGATACCCCTAATTTATAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKQIIFGKEARKEILKGIDILANTVGITLGPKGSNVILEKNFENPSIINDGVSIAKEIE LKNPYQNMGAKLIYEAASRTNDNAGDGTTTATVLAQKMIHKGFKYINSGAKSISVKEGIL KASKAVCEELIKKSKSVTTQDEIENIATISSGDKEIGKMIADAMKKVTKNGVINVDESKG FETELEVVQGMQYDKGYVSPHFVTNKENMSVELEQTSVLVTDHKINNIHEIRPLLEDIIK NSTPLLIIADSFENDLISTLIFNKISGVFNVVATNAPGFGDNQKELLQDIAILTKATFIS KDLNMKLKDVKSEHLGKISKAIIKKDNTILISDNKNEQQIQDRIQEIKGQIKQNNNDPEN KILKERLAKLSGGIAVIKVGASTETELKEKKLRIEDALNATQAAITEGIVVGGGKALVEI YKILKEKLKDSNHDVQKGINIVLNSLLVPTYQIAENAGFDGETILQKQLKQKENFGFNAE KGEYVNLIEEGIIDPTKVTRQAVVNSSSIASIVITTGAAVVSIPEKNSSDSINDTPNL |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACTGTTTTAGCACAAAAAATGATTCATAAAGGATTTAAATATATTAATTCCGGCGCT AAATCAATATCAGTAAAAGAAGGTATTTTAAAAGCATCAAAGGCAGTATGTGAAGAATTA ATAAAAAAATCTAAATCAGTTACAACACAAGATGAAATTGAAAATATAGCAACTATTTCT TCAGGTGATAAAGAAATAGGTAAAATGATTGCTGATGCCATGAAAAAAGTAACTAAAAAC GGTGTTATTAATGTTGATGAATCTAAAGGATTTGAAACTGAGTTAGAAGTAGTGCAAGGA ATGCAATATGACAAAGGTTATGTTTCACCTCATTTTGTAACTAATAAAGAAAATATGTCA GTAGAATTAGAACAAACTTCTGTTTTAGTAACTGATCATAAAATCAATAATATTCATGAA ATACGTCCTTTATTAGAAGATATAATCAAAAATTCAACTCCTTTGCTTATTATTGCGGAT TCATTTGAAAATGATTTAATTAGTACTTTAATATTTAATAAAATCAGTGGAGTGTTTAAT GTAGTAGCTACC |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQKMIHKGFKYINSGAKSISVKEGILKASKAVCEELIKKSKSVTTQDEIENIATIS SGDKEIGKMIADAMKKVTKNGVINVDESKGFETELEVVQGMQYDKGYVSPHFVTNKENMS VELEQTSVLVTDHKINNIHEIRPLLEDIIKNSTPLLIIADSFENDLISTLIFNKISGVFN VVAT |