RECORD DETAILS

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Chaperonin ID: b30925
Chaperonin Group: I
Deposit Date: 2018-05-01
Type: ref
Type strain?: yes
Genus: Pseudodesulfovibrio
Species: indicus
Strain: J2
Lineage: root; cellular organisms; Bacteria; Proteobacteria; delta/epsilon subdivisions; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Pseudodesulfovibrio
Original ID: -
CUTC ID: -
Nucleotide Genbank Accession: NZ_CP014206
Peptide Genbank Accession: WP_066805973
Best FASTA Match: -
Date of FASTA search: -
FASTA identity %: -
Best BLASTP Match: -
Date of BLASTP search: -
BLASTP identity %: -
Source: Genbank
Notes: Type strain synonyms MCCC 1A01867 = DSM 101483.
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB |
ATGGCGAAAGAGATTCTTTTCGATGCCAAAGCCCGCGAGAAGCTGAAAGCGGGTGTTGAC
AAGCTGGCCAACGCCGTCAAGGTCACCCTCGGTCCCAAGGGCCGCAACGTCGTGATGGAG
AAGTCCTTCGGCTCCCCCATCATCACCAAGGACGGCGTTTCCGTCGCCAAGGAAATCGAG
CTGGAAGACAAGTTCGAGAACATGGGCGCCCAGATGGTCAAGGAAGTCGCTTCCAAGACC
TCCGACGTCGCCGGTGACGGCACCACCACCGCCACCGTCCTGGCCCAGGCCATTTTCACC
GAAGGCGTGAAGCTCGTCGCCGCCGGCCGCTCCCCCATGTCCATCAAGCGCGGTATCGAC
AAGGCCGTCGAAGCCATCGTCGCCGAGCTCGAAAAGGTGGCCAAGCCCACCCGCGACCAG
AAGGAAATCGCCCAGGTCGGCACCATCTCCGCCAACAACGACGCCACCATCGGCAACATC
ATCGCCGAGGCCATGAACAAGGTCGGCAAGGAAGGCGTCATCACCGTGGAAGAGGCCAAG
GGCCTCGAGACCACCCTGGACGTCGTGGAAGGCATGCAGTTCGACCGCGGCTACCTGTCC
CCCTATTTCGTGACCAACACCGAGCGCATGACCTGCGAAATGGAAGAGCCCCTGATCCTC
ATCAACGAGAAGAAGGTCTCCAACATGAAGGAACTGCTGCCCGTGCTGGAGCAGTGCGCC
AAGATGTCCAAGCCCCTGGTCATCATCGCTGAAGACATCGAGGGCGAGGCCCTGGCCACC
CTCGTGGTCAACAAGCTGCGCGGCACCCTGAACGTGGTCGCCGTCAAGGCTCCCGGCTTC
GGCGAGCGCCGCAAGGCCATGCTGAAAGACATCGCCACCCTGACCGGCGGCCAGGTCGTG
TCCGAGGATCTCGGCATCAAGATCGAGAACCTGACCGTCAACGACCTCGGTTCCTGCAAG
CGCATCGTGGTCGACAAGGAAAACACCGTCATCGTCGACGGCGCCGGCAAGCCCGCCGAG
ATCAAGGCCCGCATCGCCCAGATCCGCGCCGAGATCGCCGACTCCACCTCCGACTACGAC
CGCGAGAAGCTCCAGGAGCGTCTGGCCAAGATCGTGGGCGGCGTGGCCGTCATCAACGTC
GGTGCCGCCACCGAGACCGAGATGAAGGAGAAGAAGGCCCGCGTCGAGGACGCCCTGAAC
GCCACCCGCGCGGCTGTCGAGGAAGGCATCGTGCCCGGCGGCGGCGTGGTCCTGGCCCGC
GCCGGCAAGGTCTGCGCCAAGGTCAAGGCCGCCGATGACGACGAGCAGGCCGGCATCAAC
ATCATCGCCCGCGCCGTGGAAGAGCCCCTGCGCCAGATCGCCGGCAACGCCGGTCTCGAA
GGCTCCATCGTCGTCGAGAAGATCAAGGAAGGCAAGGACGGCTTCGGCTACAACGCCGCC
ACCGACAAGTACGAAGACCTGATCAAGGCCGGCGTCATCGACCCGAAGAAGGTCACCCGC
ACCGCGCTGCAGAACGCCGCTTCCGTGGCCGGTCTGCTGCTGACCACCGAGTGCGCCATC
GCCGACAAGCCCGAGAAGAACGACGCCCCCGCAGGCATGCCCGGCGGCATGGGCGGCATG
GGCGGAATGGGCGGCATGGGCGGCATGTACTAA
Full Peptide Sequence:
BLAST this sequence:
cpnDB |
MAKEILFDAKAREKLKAGVDKLANAVKVTLGPKGRNVVMEKSFGSPIITKDGVSVAKEIE
LEDKFENMGAQMVKEVASKTSDVAGDGTTTATVLAQAIFTEGVKLVAAGRSPMSIKRGID
KAVEAIVAELEKVAKPTRDQKEIAQVGTISANNDATIGNIIAEAMNKVGKEGVITVEEAK
GLETTLDVVEGMQFDRGYLSPYFVTNTERMTCEMEEPLILINEKKVSNMKELLPVLEQCA
KMSKPLVIIAEDIEGEALATLVVNKLRGTLNVVAVKAPGFGERRKAMLKDIATLTGGQVV
SEDLGIKIENLTVNDLGSCKRIVVDKENTVIVDGAGKPAEIKARIAQIRAEIADSTSDYD
REKLQERLAKIVGGVAVINVGAATETEMKEKKARVEDALNATRAAVEEGIVPGGGVVLAR
AGKVCAKVKAADDDEQAGINIIARAVEEPLRQIAGNAGLEGSIVVEKIKEGKDGFGYNAA
TDKYEDLIKAGVIDPKKVTRTALQNAASVAGLLLTTECAIADKPEKNDAPAGMPGGMGGM
GGMGGMGGMY
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB |
GCCACCGTCCTGGCCCAGGCCATTTTCACCGAAGGCGTGAAGCTCGTCGCCGCCGGCCGC
TCCCCCATGTCCATCAAGCGCGGTATCGACAAGGCCGTCGAAGCCATCGTCGCCGAGCTC
GAAAAGGTGGCCAAGCCCACCCGCGACCAGAAGGAAATCGCCCAGGTCGGCACCATCTCC
GCCAACAACGACGCCACCATCGGCAACATCATCGCCGAGGCCATGAACAAGGTCGGCAAG
GAAGGCGTCATCACCGTGGAAGAGGCCAAGGGCCTCGAGACCACCCTGGACGTCGTGGAA
GGCATGCAGTTCGACCGCGGCTACCTGTCCCCCTATTTCGTGACCAACACCGAGCGCATG
ACCTGCGAAATGGAAGAGCCCCTGATCCTCATCAACGAGAAGAAGGTCTCCAACATGAAG
GAACTGCTGCCCGTGCTGGAGCAGTGCGCCAAGATGTCCAAGCCCCTGGTCATCATCGCT
GAAGACATCGAGGGCGAGGCCCTGGCCACCCTCGTGGTCAACAAGCTGCGCGGCACCCTG
AACGTGGTCGCCGTC
Peptide UT Sequence:
BLAST this sequence:
cpnDB |
ATVLAQAIFTEGVKLVAAGRSPMSIKRGIDKAVEAIVAELEKVAKPTRDQKEIAQVGTIS
ANNDATIGNIIAEAMNKVGKEGVITVEEAKGLETTLDVVEGMQFDRGYLSPYFVTNTERM
TCEMEEPLILINEKKVSNMKELLPVLEQCAKMSKPLVIIAEDIEGEALATLVVNKLRGTL
NVVAV