Chaperonin ID: | b28198 |
Chaperonin Group: | I |
Deposit Date: | 2016-10-29 |
Type: | ref |
Type strain?: | no |
Genus: | Helicobacter |
Species: | winghamensis |
Strain: | - |
Lineage: | root; cellular organisms; Bacteria; Proteobacteria; delta/epsilon subdivisions; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter |
Original ID: | ATCC BAA-430 |
CUTC ID: | - |
Nucleotide Genbank Accession: | NZ_GG661974 |
Peptide Genbank Accession: | WP_006802540 |
Best FASTA Match: | - |
Date of FASTA search: | - |
FASTA identity %: | - |
Best BLASTP Match: | - |
Date of BLASTP search: | - |
BLASTP identity %: | - |
Source: | Genbank |
Notes: | Reference genome from the Human Microbiome Project. |
Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAAGTAAAGAGATTAATTTTTCAGATAGCGCGAGAAATCGTTTATATGAAGGTGTG AAACAACTCAGTGATGCAGTTAAGGTAACAATGGGACCACGCGGACGCAATGTGTTGATT CAAAAAAGTTTTGGTGCGCCAAGTATAACAAAAGATGGCGTTTCTGTGGCAAAAGAGATT GAACTAGCAGATCCTATTGCAAATATGGGTGCACAACTTGTTAAAGAAGTTGCTAGCAAA ACAGCAGACGCAGCAGGCGATGGAACAACGACAGCAACCGTTCTTGCATATAGCATTTTT AAAGAGGGCTTAAGAAACATTACAGCGGGTGCAAATCCTGTACAAGTTAAACGCGGTATG GATAAGGCAGCAGAAGCAATTACAGAAGAGCTTAAAAAGATTTCTAAACCAGTTAGCGGT AAAAAAGAAATCGCACAAGTTGCTACAATCTCTGCAAATTCTGATTCCAAAGTTGGTGAG TTAATCGCTGAGGCTATGGAAAAAGTTGGAAAGGATGGCGTGATCACCGTTGAAGAAGCA AAGGGAATCAACGATGAATTAAGTGTTGTTGAGGGAATGCAATTTGATAGAGGATATTTA AGTCCTTATTTTGTAACAAATAGTGATAAAATGGAAACAGAATTAGAAAATCCATACATT TTATTAACAGATAAAAAAATCACTACAATGAAAGATATTTTACCACTTTTGGAATCCACA ATGAAAAGTGGCAAGCCTCTATTGATTATCGCTGAAGACATTGAAGGAGAAGCACTAACA ACTTTAGTTGTAAATAAATTGCGTGGTGTGTTAAATATCGCAGCAGTTAAAGCTCCGGGA TTTGGCGATAGAAGAAAAGAAATGCTAAAAGACATTGCAACTTTAACAGGTGGCGAAGTG ATTAGCGAAGAGCTTGGAAAAACTCTTGAAGCAGCAAGCATTGAAGATTTAGGGCAAGCA GCTAGGGTTGTAATTGATAAAGATAATACAACAATTGTAGATGGTGCAGGTAGCAAAGAT GCGGTTAATGCGAGAGTTGGGCAAATTAAAACACAAATTGAAGCAACAACAAGTGATTAC GACAGAGAGAAACTTCAAGAAAGACTAGCTAAACTTAGTGGCGGTGTAGCTGTTATCAAA GTTGGTGCAGCAAGTGAAGTTGAAATGAAAGAGAAAAAAGATAGAGTAGATGACGCATTA AGCGCAACAAAAGCAGCTGTTGAAGAAGGAATTATTATCGGTGGTGGTGCAGCATTAGTG CGTGCAGCAGCAAAGGTAAATCTAAGTTTAGAAGGCGATGAAAAAATCGGCTATGAAATT ATTAAACGCGCAATCTCTGCTCCGCTTAAGCAAATCGCAAGCAATGCAGGATTTGATGAT GGTGTAGTTGTAAATAATGTAGAAAAAGATTCTAATGCAAACAATGGATTTGATGCAGCA AGTGGGAATTATGTGGATATGTTTGAAGCAGGAATTATTGATCCACTAAAAGTTGCAAGA ATTGCATTGCAAAATGCTGTGTCTGTTTCAAGCCTGCTTTTAACCACAGAAGCAACAGTG CACGAAATCAAAGAAGACAAGCCAGCTATGCCTGATATGGGCGGTATGGGTGGAATGGGC GGTATGGGTGGAATGATGTAA |
Full Peptide Sequence: BLAST this sequence: cpnDB | |
MASKEINFSDSARNRLYEGVKQLSDAVKVTMGPRGRNVLIQKSFGAPSITKDGVSVAKEI ELADPIANMGAQLVKEVASKTADAAGDGTTTATVLAYSIFKEGLRNITAGANPVQVKRGM DKAAEAITEELKKISKPVSGKKEIAQVATISANSDSKVGELIAEAMEKVGKDGVITVEEA KGINDELSVVEGMQFDRGYLSPYFVTNSDKMETELENPYILLTDKKITTMKDILPLLEST MKSGKPLLIIAEDIEGEALTTLVVNKLRGVLNIAAVKAPGFGDRRKEMLKDIATLTGGEV ISEELGKTLEAASIEDLGQAARVVIDKDNTTIVDGAGSKDAVNARVGQIKTQIEATTSDY DREKLQERLAKLSGGVAVIKVGAASEVEMKEKKDRVDDALSATKAAVEEGIIIGGGAALV RAAAKVNLSLEGDEKIGYEIIKRAISAPLKQIASNAGFDDGVVVNNVEKDSNANNGFDAA SGNYVDMFEAGIIDPLKVARIALQNAVSVSSLLLTTEATVHEIKEDKPAMPDMGGMGGMG GMGGMM |
Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACCGTTCTTGCATATAGCATTTTTAAAGAGGGCTTAAGAAACATTACAGCGGGTGCA AATCCTGTACAAGTTAAACGCGGTATGGATAAGGCAGCAGAAGCAATTACAGAAGAGCTT AAAAAGATTTCTAAACCAGTTAGCGGTAAAAAAGAAATCGCACAAGTTGCTACAATCTCT GCAAATTCTGATTCCAAAGTTGGTGAGTTAATCGCTGAGGCTATGGAAAAAGTTGGAAAG GATGGCGTGATCACCGTTGAAGAAGCAAAGGGAATCAACGATGAATTAAGTGTTGTTGAG GGAATGCAATTTGATAGAGGATATTTAAGTCCTTATTTTGTAACAAATAGTGATAAAATG GAAACAGAATTAGAAAATCCATACATTTTATTAACAGATAAAAAAATCACTACAATGAAA GATATTTTACCACTTTTGGAATCCACAATGAAAAGTGGCAAGCCTCTATTGATTATCGCT GAAGACATTGAAGGAGAAGCACTAACAACTTTAGTTGTAAATAAATTGCGTGGTGTGTTA AATATCGCAGCAGTT |
Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAYSIFKEGLRNITAGANPVQVKRGMDKAAEAITEELKKISKPVSGKKEIAQVATIS ANSDSKVGELIAEAMEKVGKDGVITVEEAKGINDELSVVEGMQFDRGYLSPYFVTNSDKM ETELENPYILLTDKKITTMKDILPLLESTMKSGKPLLIIAEDIEGEALTTLVVNKLRGVL NIAAV |