Chaperonin ID: b28179
Chaperonin Group: I
Deposit Date: 2016-10-03
Type: ref
Type strain?: no
Genus: Gardnerella
Species: vaginalis
Strain: 3549624
Lineage: root; cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella
Original ID: -
CUTC ID: -
Nucleotide Genbank Accession: LFWD01000002
Peptide Genbank Accession: KMT46631
Best FASTA Match: -
Date of FASTA search: -
FASTA identity %: -
Best BLASTP Match: -
Date of BLASTP search: -
BLASTP identity %: -
Source: Genbank
Notes: Reference genome for the Human Microbiome Project
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB | 		ATGGCAAAGATTATTGCCTATGAAGAAGATGCCCGTCAGGGTATGCTTGCTGGTCTTGAT
AAGCTTGCAAATACAGTAAAGGTGACTCTTGGTCCAAAGGGTCGTAACGTTGTTCTTGAT
AAGTCTTACGGCGCCCCAACCATCACTAATGATGGCGTTTCAATCGCTAAGGAGATCGAT
CTTGAAGATCCATACGAGCGTATTGGCGCCGAATTGGTAAAGGAAGTTGCTAAGAAGACT
GACGACGTTGCAGGTGACGGCACTACAACCGCTACCGTGTTGGCTCAATCTCTGGTGCAC
GAAGGCTTAAAGAATGTTGTTGCTGGTAGCAACCCGATTGCTCTTCGTCGCGGAATTGAA
AAGGCTTCAGAAGCAATTGTTAAGGAACTTCTCGCATCTGCTAAGGATGTTGAAACCAAG
GATCAGATTGCAGCTACTGCAACTATTTCTGCAGCAGATCCTGAAGTTGGCGAAAAGATT
GCTGAAGCTTTGGATAAGGTTGGTCAGGACGGTGTTGTTACCGTTGAAGACAACAACAAG
TTTGGTCTTGATTTGGACTTCACTGAAGGTATGCGTTTTGATAAGGGTTATATTTCCCCT
TACTTCGTCACTAATGCAGAAGATCAGACTGCTGTTCTTGAAGACCCATACATTTTGCTC
ACTTCTGGCAAGGTTTCTAGCCAGCAGGACATTGTTCATGTTGCTGAACTTGTTATGAAG
TCTGGTAAGCCATTGCTCATTATTGCTGAAGATGTTGATGGCGAAGCATTACCAACTCTT
GTTCTTAACAAGATTCGCGGTACTTTCAACACTGTTGCAGTAAAGGCTCCAGGATTTGGC
GATCGCCGTAAGGCAATGCTTCAGGATATGGCTATTTTGACTGGTGCTCAGGTTGTTTCT
GACGACCTTGGTTTGAAGCTCGATTCTATCGACGCTTCTGTGTTTGGCCATGCTGCAAAG
GTGATTGTTTCTAAGGATGAAACAACTATCGTTTCTGGCGCTGGCTCTAAGGAAGATGTT
GAGGCTCGTGTTGCTCAGATTCGCGCCGAAATTGAGAACACTGATTCCGATTACGATCGC
GAAAAGCTTCAGGAACGTCTTGCTAAGCTCGCTGGCGGCGTTGCTGTTATTAAGGTTGGT
GCTGCTACGGAAGTTGAGGCTAAGGAACGTAAGCATCGCATTGAAGATGCAGTTCGTAAT
GCTAAGGCAGCTATCGAGGAGGGTTTGCTTCCAGGCGGTGGTGTAGCTTTGGTTCAGGCT
GCCGCTAAGGTTGAGAAGTCTGCTGATATTGTTGCTCTTAGTGGAGAAGAAGCCACGGGT
GCTGCAATTGTGTTCCGTGCTGTAGAAGCTCCAATCAAGCAGATTGCTCAGAATTCCGGC
GTTTCTGGAGACGTTGTGCTTAACAAGGTCCGTGAGCTTCCAGAAGGCGAAGGCTTCAAT
GCTGCAACTAATACTTATGAAGATTTGTTGGCTGCAGGCGTTACCGACCCAGTTAAGGTA
ACTCGTTCTGCTCTACAGAATGCTGCTTCTATCGCTGGCTTGTTCTTAACTACAGAAGCT
GTGGTTGCTAATAAGCCCGAGAAGCCAGCTGCTGCACCACAGGCTGGCGCAGAGATGGGC
TACTAA
Full Peptide Sequence:
BLAST this sequence:
cpnDB | 		MAKIIAYEEDARQGMLAGLDKLANTVKVTLGPKGRNVVLDKSYGAPTITNDGVSIAKEID
LEDPYERIGAELVKEVAKKTDDVAGDGTTTATVLAQSLVHEGLKNVVAGSNPIALRRGIE
KASEAIVKELLASAKDVETKDQIAATATISAADPEVGEKIAEALDKVGQDGVVTVEDNNK
FGLDLDFTEGMRFDKGYISPYFVTNAEDQTAVLEDPYILLTSGKVSSQQDIVHVAELVMK
SGKPLLIIAEDVDGEALPTLVLNKIRGTFNTVAVKAPGFGDRRKAMLQDMAILTGAQVVS
DDLGLKLDSIDASVFGHAAKVIVSKDETTIVSGAGSKEDVEARVAQIRAEIENTDSDYDR
EKLQERLAKLAGGVAVIKVGAATEVEAKERKHRIEDAVRNAKAAIEEGLLPGGGVALVQA
AAKVEKSADIVALSGEEATGAAIVFRAVEAPIKQIAQNSGVSGDVVLNKVRELPEGEGFN
AATNTYEDLLAAGVTDPVKVTRSALQNAASIAGLFLTTEAVVANKPEKPAAAPQAGAEMG
Y
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB | 		GCTACCGTGTTGGCTCAATCTCTGGTGCACGAAGGCTTAAAGAATGTTGTTGCTGGTAGC
AACCCGATTGCTCTTCGTCGCGGAATTGAAAAGGCTTCAGAAGCAATTGTTAAGGAACTT
CTCGCATCTGCTAAGGATGTTGAAACCAAGGATCAGATTGCAGCTACTGCAACTATTTCT
GCAGCAGATCCTGAAGTTGGCGAAAAGATTGCTGAAGCTTTGGATAAGGTTGGTCAGGAC
GGTGTTGTTACCGTTGAAGACAACAACAAGTTTGGTCTTGATTTGGACTTCACTGAAGGT
ATGCGTTTTGATAAGGGTTATATTTCCCCTTACTTCGTCACTAATGCAGAAGATCAGACT
GCTGTTCTTGAAGACCCATACATTTTGCTCACTTCTGGCAAGGTTTCTAGCCAGCAGGAC
ATTGTTCATGTTGCTGAACTTGTTATGAAGTCTGGTAAGCCATTGCTCATTATTGCTGAA
GATGTTGATGGCGAAGCATTACCAACTCTTGTTCTTAACAAGATTCGCGGTACTTTCAAC
ACTGTTGCAGTA
Peptide UT Sequence:
BLAST this sequence:
cpnDB | 		ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS
AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT
AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN
TVAV