RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b26845 |
| Chaperonin Group: | I |
| Deposit Date: | 2013-07-07 |
| Type: | ref |
| Type strain?: | no |
| Genus: | Acidovorax |
| Species: | avenae |
| Strain: | subsp. avenae RS-1 |
| Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | NZ_AFPT01000116 |
| Peptide Genbank Accession: | WP_019702568 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | Rice field isolate. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAGCAAAAGACGTAGTTTTCGGCGGCGAAGCCCGCGCTCGCATGGTCGAAGGCGTG AACATTCTCGCCAACGCCGTCAAGGTGACCCTGGGCCCCAAGGGCCGCAACGTGGTGCTC GAGCGCTCCTTCGGCGCCCCCACCGTGACCAAGGACGGCGTGTCCGTGGCCAAGGAAATC GAACTGAAGGACAAGCTGCAGAACATGGGCGCCCAGCTCGTGAAGGAAGTGGCTTCCAAG ACCAGCGACAACGCCGGTGACGGCACGACCACCGCCACGGTGCTGGCCCAGGCCATCGTG CGCGAAGGCTCCAAGTACGTGGCCGCCGGCCTGAACCCGATGGACCTCAAGCGCGGCATC GACAAGGCCGTGACGGCCCTGGTCGCCGAGCTGAAGAAGGCTTCCAAGGCCACGACGACC TCCAAGGAAATCGCCCAGGTGGGTTCGATCTCCGCCAACTCCGACGAATCCATCGGCAAG ATCATTGCCGACGCCATGGACAAGGTCGGCAAGGAAGGCGTGATCACCGTGGAAGACGGC AAGAGCCTGGACAACGAGCTGGACGTCGTGGAAGGCATGCAGTTCGACCGCGGCTACCTG TCGCCCTACTTCATCAACAACCCCGAAAAGCAGGCCGCCCTGCTGGACAACCCCTTCGTG CTGCTGTTCGACAAGAAGATCAGCAACATCCGTGACCTGCTGCCCACGCTGGAGCAGGTC GCCAAGGCCGGCCGTCCGCTGCTGATCATCGCCGAGGAAGTCGAGGGCGAAGCCCTGGCG ACCCTGGTGGTGAACACCATCCGCGGCATCCTGAAGGTCGTGGCCGTGAAGGCGCCTGGC TTCGGCGACCGCCGCAAGGCCATGCTGGAAGACATCGCCATCCTGACGGGCGGCAAGGTG ATCGCCGAGGAAGTGGGCCTGACGCTCGAGAAGGTGACCCTGGCCGACCTGGGCCAGGCC AAGCGCATCGAAGTGGGCAAGGAAAACACCACCATCATCGACGGCGCAGGCGCTGCAGCT GACATCGAAGCCCGCGTGAAGCAGATCCGCATCCAGATCGAGGAAGCCACGAGCGACTAC GACCGCGAGAAGCTGCAGGAACGCGTGGCCAAGCTGGCCGGCGGCGTGGCCGTGATCAAG GTCGGCGCTGCCACCGAAGTCGAGATGAAGGAAAAGAAGGCACGCGTGGAAGACGCACTG CACGCCACCCGCGCTGCCGTGGAAGAAGGCATCGTGGCCGGCGGCGGCGTGGCCCTGCTG CGCGCCAAGCAGGCTGCTGGCGAGATCAAGGGTGACAACCCCGATCAGGACGCCGGCATC AAGCTGATCCTGAAGGCGATCGAAGCGCCCCTGCGCGAGATCGTGGCCAACGCCGGTGGC GAGCCGTCCGTGGTGGTCAATGCCGTGCTGAACGGCAAGGGCAACTACGGCTTCAACGCC GCCAACGACACCTACGGCGACATGCTCGAAATGGGCATCCTGGACCCGACGAAGGTGACC CGCACGGCCCTGCAGAACGCCGCTTCCGTGGCTTCGCTGCTGCTGACGACCGAAGCCATG GTGGCCGAGGCTCCGAAGGACGATGCACCGGCTCCCGCGATGCCCGACATGGGCGGCATG GGCGGCATGGGCATGTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKDVVFGGEARARMVEGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI ELKDKLQNMGAQLVKEVASKTSDNAGDGTTTATVLAQAIVREGSKYVAAGLNPMDLKRGI DKAVTALVAELKKASKATTTSKEIAQVGSISANSDESIGKIIADAMDKVGKEGVITVEDG KSLDNELDVVEGMQFDRGYLSPYFINNPEKQAALLDNPFVLLFDKKISNIRDLLPTLEQV AKAGRPLLIIAEEVEGEALATLVVNTIRGILKVVAVKAPGFGDRRKAMLEDIAILTGGKV IAEEVGLTLEKVTLADLGQAKRIEVGKENTTIIDGAGAAADIEARVKQIRIQIEEATSDY DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALL RAKQAAGEIKGDNPDQDAGIKLILKAIEAPLREIVANAGGEPSVVVNAVLNGKGNYGFNA ANDTYGDMLEMGILDPTKVTRTALQNAASVASLLLTTEAMVAEAPKDDAPAPAMPDMGGM GGMGM |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCCACGGTGCTGGCCCAGGCCATCGTGCGCGAAGGCTCCAAGTACGTGGCCGCCGGCCTG AACCCGATGGACCTCAAGCGCGGCATCGACAAGGCCGTGACGGCCCTGGTCGCCGAGCTG AAGAAGGCTTCCAAGGCCACGACGACCTCCAAGGAAATCGCCCAGGTGGGTTCGATCTCC GCCAACTCCGACGAATCCATCGGCAAGATCATTGCCGACGCCATGGACAAGGTCGGCAAG GAAGGCGTGATCACCGTGGAAGACGGCAAGAGCCTGGACAACGAGCTGGACGTCGTGGAA GGCATGCAGTTCGACCGCGGCTACCTGTCGCCCTACTTCATCAACAACCCCGAAAAGCAG GCCGCCCTGCTGGACAACCCCTTCGTGCTGCTGTTCGACAAGAAGATCAGCAACATCCGT GACCTGCTGCCCACGCTGGAGCAGGTCGCCAAGGCCGGCCGTCCGCTGCTGATCATCGCC GAGGAAGTCGAGGGCGAAGCCCTGGCGACCCTGGTGGTGAACACCATCCGCGGCATCCTG AAGGTCGTGGCCGTG |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIVREGSKYVAAGLNPMDLKRGIDKAVTALVAELKKASKATTTSKEIAQVGSIS ANSDESIGKIIADAMDKVGKEGVITVEDGKSLDNELDVVEGMQFDRGYLSPYFINNPEKQ AALLDNPFVLLFDKKISNIRDLLPTLEQVAKAGRPLLIIAEEVEGEALATLVVNTIRGIL KVVAV |