Chaperonin ID: | b26816 |
Chaperonin Group: | I |
Deposit Date: | 2013-07-07 |
Type: | ref |
Type strain?: | yes |
Genus: | Thiomicrospira |
Species: | halophila |
Strain: | - |
Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira |
Original ID: | DSM 15072 |
CUTC ID: | - |
Nucleotide Genbank Accession: | NZ_KB913033 |
Peptide Genbank Accession: | WP_028485328 |
Best FASTA Match: | - |
Date of FASTA search: | - |
FASTA identity %: | - |
Best BLASTP Match: | - |
Date of BLASTP search: | - |
BLASTP identity %: | - |
Source: | Genbank |
Notes: | Type strain synonyms strain HL 5 = DSM 15072 = UNIQEM U 221. |
Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAAAAGACGTACGCTTTGGATTGGAATCGCGTGAAAAGATGGTCGAAGGGATCAAT GTCCTGGCCGACGCGGTCAAAGTCACGCTGGGGCCAAAAGGCCGTAATGTGGTACTGGAA AAATCGTTCGGTGCCCCGACCATCACCAAGGATGGTGTGACCGTAGCCCGTGAGATCGAA CTGGAAGACAAGTTCATGAATATGGGTGCACAGATGGTGAAGGAAGTGTCTTCCAAAACC AACGATGTGGCCGGTGATGGCACCACGACCGCGACCGTTCTGGCGCAGTCGATTGTGCGC GAAGGCATGAAAGCCGTGGCCGCAGGCATGAATCCGATGGATTTGAACCGCGGGATTCAC AAGGCGGTGGAAGCCGTGGTCAAAGAAATTCAGAAAATGTCTGTGCCGTGTGATTCCTAT GATTCGATTGCTCAGGTGGGCACGATTTCTGCGAACTCCGATTCTGCTGTGGGCAAGATG ATCGCCGACGCGATGGACAAGGTCAGCACCGAGGGTGTGATCACCGTGGAAGAAGGGTCT TCACTGCAGGACGAGCTGGTGGTCGTGGAAGGCATGGAGTTCGACCGTGGTTACCTGTCG CCTTACTTTGTGACCGATCAGGAAAAAATGGTCGCGGAACTGGAAAACCCATACATCCTG TTGTTCGACAAGAAAATCTCCAACATCCGTGAACTGCTGCCGACTCTGGAAGCGGTGTCC AAAACCGGTCGTCCGTTGCTGATTGTGGCGGAAGACGTGGACGGCGAAGCGCTGGCCACC CTGGTGATCAACAACATGCGCGGCGTGATGAAAGTGGCGGCGGTCAAAGCGCCCGGCTTT GGTGAGCGTCGCAAAGCCATGTTGCAGGATATGGCGGTGCTGACAGGCGGCAGCGTGATT TCGGAAGAAGTGGGTCTGACTCTGGAAAACGTCGAGCTGGACATGCTGGGCGAAACCAAG TCGGCCGTTGTGGGCAAAGACAGCACCAAGCTGATCGATGGCACCGGTTCCAAGGACGAC ATCGAAGGCCGTTGCGCGCAGATCAAAGCTCAGATGGAAAATACCACTTCCGAGTACGAC AATGAGAAGTTGCAGGAACGTCTGGCCAAGCTGGCTGGCGGTGTCGCCGTCATCAAAATG GGTGCGGCCACTGAAATGGAAATGAAAGAGCGTAAAGACCGTGTGGACGATGCGTTGCAT GCGACCCGTGCGGCGGTTCAGGAAGGCATTGTGGCCGGTGGTGGTACCGCGCTGGTACGT GCCCGCGCCAATGTGTCGGTCAAAGGCGACAACGACGACCAGCAGGTTGGCATCGAAATC GCGCTGCGCGCCATGGAAGAACCCATGCGTCAGATCGCGTCCAACTGTGGTCTGGAAGGC TCTGTGATTGTGAACAAGGTGATGGAAGCCAAGCCTGAAATCGGGTTTGATGCCACTTCT GAAACCTATGTGGACATGATCAAGCAGGGCATCATCGATCCGGCCAAAGTGACCCGTTCT GCCTTGCAGAATGCGGCTTCGATTGCCGGGCTGGTGCTGACCACAGGCGCGGCGATTGCC GACCTGCCATCCAAGGACGACGGCGCTGATGCTGCCGGAGGCGGTGGCATGGGCGGAATG GGCGGCATGGGCGGCATGATGTAA |
Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKDVRFGLESREKMVEGINVLADAVKVTLGPKGRNVVLEKSFGAPTITKDGVTVAREIE LEDKFMNMGAQMVKEVSSKTNDVAGDGTTTATVLAQSIVREGMKAVAAGMNPMDLNRGIH KAVEAVVKEIQKMSVPCDSYDSIAQVGTISANSDSAVGKMIADAMDKVSTEGVITVEEGS SLQDELVVVEGMEFDRGYLSPYFVTDQEKMVAELENPYILLFDKKISNIRELLPTLEAVS KTGRPLLIVAEDVDGEALATLVINNMRGVMKVAAVKAPGFGERRKAMLQDMAVLTGGSVI SEEVGLTLENVELDMLGETKSAVVGKDSTKLIDGTGSKDDIEGRCAQIKAQMENTTSEYD NEKLQERLAKLAGGVAVIKMGAATEMEMKERKDRVDDALHATRAAVQEGIVAGGGTALVR ARANVSVKGDNDDQQVGIEIALRAMEEPMRQIASNCGLEGSVIVNKVMEAKPEIGFDATS ETYVDMIKQGIIDPAKVTRSALQNAASIAGLVLTTGAAIADLPSKDDGADAAGGGGMGGM GGMGGMM |
Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCGACCGTTCTGGCGCAGTCGATTGTGCGCGAAGGCATGAAAGCCGTGGCCGCAGGCATG AATCCGATGGATTTGAACCGCGGGATTCACAAGGCGGTGGAAGCCGTGGTCAAAGAAATT CAGAAAATGTCTGTGCCGTGTGATTCCTATGATTCGATTGCTCAGGTGGGCACGATTTCT GCGAACTCCGATTCTGCTGTGGGCAAGATGATCGCCGACGCGATGGACAAGGTCAGCACC GAGGGTGTGATCACCGTGGAAGAAGGGTCTTCACTGCAGGACGAGCTGGTGGTCGTGGAA GGCATGGAGTTCGACCGTGGTTACCTGTCGCCTTACTTTGTGACCGATCAGGAAAAAATG GTCGCGGAACTGGAAAACCCATACATCCTGTTGTTCGACAAGAAAATCTCCAACATCCGT GAACTGCTGCCGACTCTGGAAGCGGTGTCCAAAACCGGTCGTCCGTTGCTGATTGTGGCG GAAGACGTGGACGGCGAAGCGCTGGCCACCCTGGTGATCAACAACATGCGCGGCGTGATG AAAGTGGCGGCGGTC |
Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQSIVREGMKAVAAGMNPMDLNRGIHKAVEAVVKEIQKMSVPCDSYDSIAQVGTIS ANSDSAVGKMIADAMDKVSTEGVITVEEGSSLQDELVVVEGMEFDRGYLSPYFVTDQEKM VAELENPYILLFDKKISNIRELLPTLEAVSKTGRPLLIVAEDVDGEALATLVINNMRGVM KVAAV |