Chaperonin ID: b26731
Chaperonin Group: I
Deposit Date: 2014-06-30
Type: ref
Type strain?: no
Genus: Gardnerella
Species: vaginalis
Strain: JCP8108
Lineage: root; cellular organisms; Bacteria; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella
Original ID: -
CUTC ID: -
Nucleotide Genbank Accession: ATJJ01000013
Peptide Genbank Accession: EPI49092
Best FASTA Match: -
Date of FASTA search: -
FASTA identity %: -
Best BLASTP Match: -
Date of BLASTP search: -
BLASTP identity %: -
Source: Genbank
Notes: Reference genome for the Human Microbiome Project.
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB | 		ATGGCAAAGATTATTGCCTATGAAGAAGATGCCCGTCAGGGTATGCTTGCTGGTCTTGAT
AAGCTTGCAAATACAGTAAAGGTGACTCTTGGTCCAAAGGGTCGTAACGTTGTTCTTGAT
AAGTCTTACGGCGCCCCAACCATCACTAATGATGGCGTTTCAATCGCTAAGGAGATCGAT
CTTGAAGATCCATACGAGCGTATTGGCGCCGAATTGGTAAAGGAAGTTGCTAAGAAGACT
GACGACGTTGCAGGTGACGGCACTACAACCGCTACCGTGTTGGCTCAGTCTTTGGTGCAC
GAAGGCTTAAAGAACGTTGTTGCTGGTAGCAACCCAATCGCTCTTCGTCGCGGAATTGAA
AAGGCTTCAGAAGCAATTGTTAAGGAACTTCTCGCATCTGCTAAGGATGTTGAAACCAAG
GATCAGATTGCAGCTACTGCAACTATTTCTGCAGCAGATCCTGAAGTTGGCGAAAAGATT
GCTGAAGCTTTGGATAAGGTTGGTCAAGACGGTGTTGTTACCGTTGAAGACAACAACAAG
TTTGGTCTTGATTTGGACTTCACTGAAGGTATGCGTTTTGATAAGGGTTATATTTCCCCT
TACTTCGTCACTAATGCAGAAGATCAGACTGCTGTTCTTGAAGACCCATACATTTTGCTC
ACTTCTGGCAAGGTTTCTAGCCAGCAGGACATTGTTCATGTTGCTGAACTTGTTATGAAG
TCTGGTAAGCCGTTGCTTATTATTGCTGAAGATGTTGATGGCGAAGCATTACCAACTCTT
GTTCTTAACAAGATTCGCGGTACTTTCAACACTGTTGCAGTAAAGGCTCCAGGATTTGGC
GATCGCCGTAAGGCAATGCTTCAGGATATGGCTATTTTGACTGGTGCTCAGGTTGTTTCT
GACGACCTTGGCTTGAAGCTCGATTCTATCGACGCTTCTGTGTTTGGCCATGCTGCAAAG
GTTATTGTTTCTAAGGATGAAACAACTATCGTTTCTGGCGCTGGCTCTAAGGAAGATGTT
GAGGCTCGTGTTGCTCAGATTCGCGCCGAAATTGAGAACACCGATTCCGATTACGATCGC
GAAAAGCTTCAGGAGCGTCTTGCTAAGCTCGCTGGTGGTGTAGCTGTTATTAAGGTTGGT
GCTGCTACGGAAGTTGAGGCTAAGGAACGTAAGCATCGCATTGAAGATGCAGTTCGTAAT
GCTAAGGCTGCAATTGAGGAAGGCTTGCTTCCAGGTGGTGGCGTTGCTCTTGTTCAGGCT
GCTGCTAAGGTTGAGAAGTCTGCTGATATTGTTGCTCTTAGTGGAGAAGAAGCCACAGGT
GCTGCAATTGTGTTCCGTGCTGTAGAAGCTCCAATCAAGCAGATTGCTCAGAATTCTGGC
GTTTCTGGAGACGTTGTACTCAACAAGGTACGTGAGCTTCCAGAAGGCGAAGGCTTCAAT
GCTGCAACTAATACTTATGAAGATTTGTTGGCTGCAGGCGTAACGGATCCAGTAAAGGTA
ACTCGTTCTGCTCTACAGAATGCTGCTTCTATCGCTGGCTTGTTCTTAACTACAGAAGCT
GTGGTTGCTAATAAGCCTGAGAAGCCAGCTGCTGCTCCTGCAGGCGGCGCAGAGATGGGC
TACTAA
Full Peptide Sequence:
BLAST this sequence:
cpnDB | 		MAKIIAYEEDARQGMLAGLDKLANTVKVTLGPKGRNVVLDKSYGAPTITNDGVSIAKEID
LEDPYERIGAELVKEVAKKTDDVAGDGTTTATVLAQSLVHEGLKNVVAGSNPIALRRGIE
KASEAIVKELLASAKDVETKDQIAATATISAADPEVGEKIAEALDKVGQDGVVTVEDNNK
FGLDLDFTEGMRFDKGYISPYFVTNAEDQTAVLEDPYILLTSGKVSSQQDIVHVAELVMK
SGKPLLIIAEDVDGEALPTLVLNKIRGTFNTVAVKAPGFGDRRKAMLQDMAILTGAQVVS
DDLGLKLDSIDASVFGHAAKVIVSKDETTIVSGAGSKEDVEARVAQIRAEIENTDSDYDR
EKLQERLAKLAGGVAVIKVGAATEVEAKERKHRIEDAVRNAKAAIEEGLLPGGGVALVQA
AAKVEKSADIVALSGEEATGAAIVFRAVEAPIKQIAQNSGVSGDVVLNKVRELPEGEGFN
AATNTYEDLLAAGVTDPVKVTRSALQNAASIAGLFLTTEAVVANKPEKPAAAPAGGAEMG
Y
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB | 		GCTACCGTGTTGGCTCAGTCTTTGGTGCACGAAGGCTTAAAGAACGTTGTTGCTGGTAGC
AACCCAATCGCTCTTCGTCGCGGAATTGAAAAGGCTTCAGAAGCAATTGTTAAGGAACTT
CTCGCATCTGCTAAGGATGTTGAAACCAAGGATCAGATTGCAGCTACTGCAACTATTTCT
GCAGCAGATCCTGAAGTTGGCGAAAAGATTGCTGAAGCTTTGGATAAGGTTGGTCAAGAC
GGTGTTGTTACCGTTGAAGACAACAACAAGTTTGGTCTTGATTTGGACTTCACTGAAGGT
ATGCGTTTTGATAAGGGTTATATTTCCCCTTACTTCGTCACTAATGCAGAAGATCAGACT
GCTGTTCTTGAAGACCCATACATTTTGCTCACTTCTGGCAAGGTTTCTAGCCAGCAGGAC
ATTGTTCATGTTGCTGAACTTGTTATGAAGTCTGGTAAGCCGTTGCTTATTATTGCTGAA
GATGTTGATGGCGAAGCATTACCAACTCTTGTTCTTAACAAGATTCGCGGTACTTTCAAC
ACTGTTGCAGTA
Peptide UT Sequence:
BLAST this sequence:
cpnDB | 		ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS
AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT
AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN
TVAV