Chaperonin ID: b26726
Chaperonin Group: I
Deposit Date: 2014-06-30
Type: ref
Type strain?: no
Genus: Gardnerella
Species: vaginalis
Strain: JCP7276
Lineage: root; cellular organisms; Bacteria; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella
Original ID: -
CUTC ID: -
Nucleotide Genbank Accession: ATJR01000001
Peptide Genbank Accession: EPI57609
Best FASTA Match: -
Date of FASTA search: -
FASTA identity %: -
Best BLASTP Match: -
Date of BLASTP search: -
BLASTP identity %: -
Source: Genbank
Notes: Reference genome for the Human Microbiome Project.
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB | 		ATGGCAAAGATTATTGCCTATGAAGAAGATGCCCGTCAGGGTATGCTTGCTGGTCTTGAT
AAGCTTGCAAATACAGTAAAGGTGACTCTTGGTCCAAAGGGTCGTAACGTTGTTCTTGAT
AAGTCTTACGGCGCCCCAACCATCACTAATGATGGCGTTTCAATCGCTAAGGAGATCGAT
CTTGAAGATCCATACGAGCGTATTGGCGCCGAATTGGTAAAGGAAGTTGCTAAGAAGACT
GACGACGTTGCAGGTGACGGCACTACAACCGCTACCGTGTTGGCTCAATCTCTGGTGCAC
GAAGGCTTAAAGAATGTTGTTGCTGGTAGCAACCCGATCGCTCTTCGTCGCGGAATTGAA
AAGGCTTCAGAAGCAATTGTTAAGGAACTTCTCGCATCTGCTAAGGATGTTGAAACAAAG
GATCAGATTGCAGCTACTGCAACTATTTCTGCAGCAGATCCTGAAGTTGGCGAAAAGATT
GCTGAAGCTTTGGATAAGGTTGGTCAGGACGGTGTTGTTACCGTTGAAGACAACAACAAG
TTTGGTCTTGATTTGGACTTCACTGAAGGTATGCGTTTTGATAAGGGTTATATTTCCCCT
TACTTCGTCACTAATGCAGAAGATCAGACTGCTGTTCTTGAAGACCCATACATTTTGCTC
ACTTCTGGCAAGGTTTCTAGCCAGCAGGACATTGTTCATGTTGCTGAACTTGTTATGAAG
TCTGGTAAGCCATTGCTCATTATTGCTGAAGATGTTGATGGCGAAGCATTACCAACTCTT
GTTCTTAACAAGATTCGCGGTACTTTCAATACTGTTGCAGTAAAGGCTCCAGGATTTGGC
GATCGCCGTAAGGCAATGCTTCAGGATATGGCTATTTTGACTGGTGCTCAGGTTGTTTCT
GACGACCTTGGTTTGAAGCTTGATTCTATCGACGCTTCTGTGTTTGGTCATGCTGCAAAG
GTTATTGTTTCTAAGGATGAAACAACTATCGTTTCTGGCGCTGGCTCTAAGGAAGATGTT
GAGGCTCGTGTTGCTCAGATTCGCGCCGAAATTGAGAACACTGATTCCGATTACGATCGC
GAAAAGCTTCAGGAACGTCTTGCTAAGCTCGCTGGCGGCGTTGCTGTTATTAAGGTTGGT
GCTGCTACGGAAGTTGAGGCTAAGGAACGTAAGCATCGCATTGAAGATGCAGTTCGTAAT
GCTAAGGCTGCTATCGAGGAGGGTTTGCTTCCAGGCGGTGGTGTAGCTTTGGTTCAGGCT
GCCGCTAAGGTTGAGAAGTCTGCTGATATTGTTGCTCTTAGTGGAGAAGAAGCCACGGGT
GCTGCAATTGTGTTCCGTGCTGTAGAAGCTCCAATCAAGCAGATTGCTCAGAATTCCGGC
GTTTCTGGAGACGTTGTGCTCAACAAGGTCCGTGAGCTTCCAGAAGGCGAAGGCTTCAAT
GCTGCAACTAATACTTATGAAGATTTGTTGGCTGCAGGCGTTACCGACCCAGTTAAGGTA
ACTCGTTCTGCTCTACAGAATGCTGCTTCTATCGCTGGCTTGTTCTTAACTACAGAAGCT
GTGGTTGCTAATAAGCCTGAGAAGCCAGCTGCTGCACCACAGGCTGGCGCAGAGATGGGC
TACTAA
Full Peptide Sequence:
BLAST this sequence:
cpnDB | 		MAKIIAYEEDARQGMLAGLDKLANTVKVTLGPKGRNVVLDKSYGAPTITNDGVSIAKEID
LEDPYERIGAELVKEVAKKTDDVAGDGTTTATVLAQSLVHEGLKNVVAGSNPIALRRGIE
KASEAIVKELLASAKDVETKDQIAATATISAADPEVGEKIAEALDKVGQDGVVTVEDNNK
FGLDLDFTEGMRFDKGYISPYFVTNAEDQTAVLEDPYILLTSGKVSSQQDIVHVAELVMK
SGKPLLIIAEDVDGEALPTLVLNKIRGTFNTVAVKAPGFGDRRKAMLQDMAILTGAQVVS
DDLGLKLDSIDASVFGHAAKVIVSKDETTIVSGAGSKEDVEARVAQIRAEIENTDSDYDR
EKLQERLAKLAGGVAVIKVGAATEVEAKERKHRIEDAVRNAKAAIEEGLLPGGGVALVQA
AAKVEKSADIVALSGEEATGAAIVFRAVEAPIKQIAQNSGVSGDVVLNKVRELPEGEGFN
AATNTYEDLLAAGVTDPVKVTRSALQNAASIAGLFLTTEAVVANKPEKPAAAPQAGAEMG
Y
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB | 		GCTACCGTGTTGGCTCAATCTCTGGTGCACGAAGGCTTAAAGAATGTTGTTGCTGGTAGC
AACCCGATCGCTCTTCGTCGCGGAATTGAAAAGGCTTCAGAAGCAATTGTTAAGGAACTT
CTCGCATCTGCTAAGGATGTTGAAACAAAGGATCAGATTGCAGCTACTGCAACTATTTCT
GCAGCAGATCCTGAAGTTGGCGAAAAGATTGCTGAAGCTTTGGATAAGGTTGGTCAGGAC
GGTGTTGTTACCGTTGAAGACAACAACAAGTTTGGTCTTGATTTGGACTTCACTGAAGGT
ATGCGTTTTGATAAGGGTTATATTTCCCCTTACTTCGTCACTAATGCAGAAGATCAGACT
GCTGTTCTTGAAGACCCATACATTTTGCTCACTTCTGGCAAGGTTTCTAGCCAGCAGGAC
ATTGTTCATGTTGCTGAACTTGTTATGAAGTCTGGTAAGCCATTGCTCATTATTGCTGAA
GATGTTGATGGCGAAGCATTACCAACTCTTGTTCTTAACAAGATTCGCGGTACTTTCAAT
ACTGTTGCAGTA
Peptide UT Sequence:
BLAST this sequence:
cpnDB | 		ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS
AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT
AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN
TVAV