Chaperonin ID: b24146
Chaperonin Group: I
Deposit Date: 2013-03-31
Type: ref
Type strain?: no
Genus: Helicobacter
Species: pylori
Strain: CPY1662
Lineage: root; cellular organisms; Bacteria; Proteobacteria; delta/epsilon subdivisions; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter
Original ID: -
CUTC ID: -
Nucleotide Genbank Accession: NZ_AOTT01000009
Peptide Genbank Accession: WP_001920311
Best FASTA Match: -
Date of FASTA search: -
FASTA identity %: -
Best BLASTP Match: -
Date of BLASTP search: -
BLASTP identity %: -
Source: Genbank
Notes: Isolated from patien t with duodenal ulcer.
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB | 		ATGGCAAAAGAAATCAAATTTTCAGATAGTGCAAGAAACCTTTTATTTGAAGGCGTGAGA
CAACTCCATGACGCTGTCAAAGTAACCATGGGGCCAAGAGGCAGGAATGTGTTGATCCAA
AAAAGCTATGGCGCTCCAAGCATCACCAAAGACGGCGTGAGCGTGGCTAAAGAGATTGAA
TTAAGTTGCCCGGTGGCTAACATGGGTGCTCAACTCGTTAAAGAAGTAGCGAGCAAAACC
GCTGATGCTGCCGGCGATGGCACGACCACAGCGACCGTGCTTGCTTATAGCATTTTTAAA
GAGGGCTTGAGGAATATCACGGCTGGGGCTAACCCTATTGAAGTGAAACGAGGCATGGAT
AAAGCCGCTGAAGCCATTATTAATGAGCTTAAAAAAGCGAGCAAAAAAGTAGGCGGTAAA
GAAGAAATCACCCAAGTAGCGACCATTTCTGCAAACTCCGATCACAATATCGGGAAACTC
ATCGCTGACGCTATGGAAAAAGTGGGCAAAGACGGCGTGATCACCGTTGAAGAAGCTAAG
GGAATTGAAGATGAATTAGATGTCGTAGAGGGCATGCAATTTGATAGAGGCTATCTCTCC
CCTTACTTTGTAACAAACGCTGAGAAAATGACCGCTCAATTGGATAACGCTTACATCCTT
TTAACGGATAAAAAAATCTCTAGCATGAAAGACATTCTCCCGCTACTAGAAAAAACCATG
AAAGAGAGCAAACCGCTTTTAATCATCGCTGAAGACATTGAGGGCGAAGCTTTAACGACT
TTAGTGGTGAATAAATTAAGAGGCGTGTTGAATATCGCAGCGGTTAAAGCTCCAGGCTTT
GGGGACAGAAGAAAAGAAATGCTCAAAGACATCGCTGTTTTAACCGGCGGTCAAGTCATT
AGCGAAGAATTAGGCTTGAGTCTAGAAAACGCTGAAGTGGAGTTTTTAGGCAAAGCCGGA
AGGATTGTGATTGACAAAGACAACACCACGATCGTAGATGGCAAAGGCCATAGCCATGAT
GTCAAAGACAGAGTCGCGCAAATCAAAACCCAAATTGCAAGCACGACAAGCGATTATGAC
AAAGAAAAATTGCAAGAAAGATTGGCCAAACTCTCTGGCGGTGTGGCTGTGATTAAAGTG
GGCGCTGCGAGTGAAGTGGAAATGAAAGAGAAAAAAGACCGGGTTGATGACGCGTTGAGC
GCGACTAAAGCGGCTGTTGAAGAAGGCATTGTTATTGGCGGCGGTGCGGCTCTCATTCGC
GCGGCTCAAAAAGTGCATTTGGATTTACACGATGATGAAAAAGTGGGCTATGAAATCATC
ATGCGCGCCATTAAAGCCCCATTAGCTCAAATCGCTATCAATGCCGGTTATGATGGCGGT
GTGGTCGTGAATGAAGTGCAAAAACACGAAGGGCATTTTGGTTTTAACGCTAGCAATGGC
AAGTATGTGGATATGTTTAAAGAAGGCATTATTGACCCCTTAAAAGTAGAAAGGATCGCT
TTACAAAATGCGGTTTCAGTTTCAAGCCTGCTTTTAACCACAGAAGCCACCGTGCATGAA
ATCAAAGAAGAAAAAGCAACCCCAGCAATGCCTGATATGGGTGGCATGGGTGGTATGGGA
GGCATGGGTGGCATGATGTAA
Full Peptide Sequence:
BLAST this sequence:
cpnDB | 		MAKEIKFSDSARNLLFEGVRQLHDAVKVTMGPRGRNVLIQKSYGAPSITKDGVSVAKEIE
LSCPVANMGAQLVKEVASKTADAAGDGTTTATVLAYSIFKEGLRNITAGANPIEVKRGMD
KAAEAIINELKKASKKVGGKEEITQVATISANSDHNIGKLIADAMEKVGKDGVITVEEAK
GIEDELDVVEGMQFDRGYLSPYFVTNAEKMTAQLDNAYILLTDKKISSMKDILPLLEKTM
KESKPLLIIAEDIEGEALTTLVVNKLRGVLNIAAVKAPGFGDRRKEMLKDIAVLTGGQVI
SEELGLSLENAEVEFLGKAGRIVIDKDNTTIVDGKGHSHDVKDRVAQIKTQIASTTSDYD
KEKLQERLAKLSGGVAVIKVGAASEVEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIR
AAQKVHLDLHDDEKVGYEIIMRAIKAPLAQIAINAGYDGGVVVNEVQKHEGHFGFNASNG
KYVDMFKEGIIDPLKVERIALQNAVSVSSLLLTTEATVHEIKEEKATPAMPDMGGMGGMG
GMGGMM
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB | 		GCGACCGTGCTTGCTTATAGCATTTTTAAAGAGGGCTTGAGGAATATCACGGCTGGGGCT
AACCCTATTGAAGTGAAACGAGGCATGGATAAAGCCGCTGAAGCCATTATTAATGAGCTT
AAAAAAGCGAGCAAAAAAGTAGGCGGTAAAGAAGAAATCACCCAAGTAGCGACCATTTCT
GCAAACTCCGATCACAATATCGGGAAACTCATCGCTGACGCTATGGAAAAAGTGGGCAAA
GACGGCGTGATCACCGTTGAAGAAGCTAAGGGAATTGAAGATGAATTAGATGTCGTAGAG
GGCATGCAATTTGATAGAGGCTATCTCTCCCCTTACTTTGTAACAAACGCTGAGAAAATG
ACCGCTCAATTGGATAACGCTTACATCCTTTTAACGGATAAAAAAATCTCTAGCATGAAA
GACATTCTCCCGCTACTAGAAAAAACCATGAAAGAGAGCAAACCGCTTTTAATCATCGCT
GAAGACATTGAGGGCGAAGCTTTAACGACTTTAGTGGTGAATAAATTAAGAGGCGTGTTG
AATATCGCAGCGGTT
Peptide UT Sequence:
BLAST this sequence:
cpnDB | 		ATVLAYSIFKEGLRNITAGANPIEVKRGMDKAAEAIINELKKASKKVGGKEEITQVATIS
ANSDHNIGKLIADAMEKVGKDGVITVEEAKGIEDELDVVEGMQFDRGYLSPYFVTNAEKM
TAQLDNAYILLTDKKISSMKDILPLLEKTMKESKPLLIIAEDIEGEALTTLVVNKLRGVL
NIAAV