RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b23440 |
| Chaperonin Group: | I |
| Deposit Date: | 2013-03-10 |
| Type: | ref |
| Type strain?: | no |
| Genus: | Helicobacter |
| Species: | pylori |
| Strain: | GAM80Ai |
| Lineage: | root; cellular organisms; Bacteria; Proteobacteria; delta/epsilon subdivisions; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | APED01000064 |
| Peptide Genbank Accession: | EMH33396 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | Reference genome for the Human Microbiome Project. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAAAAGAAATTAAATTTTCAGATAGCGCAAGAAACCTTCTATTTGAAGGCGTGAGA CAACTCCATGACGCTGTTAAAGTTACCATGGGGCCAAGAGGCAGGAACGTGTTGATTCAA AAAAGCTATGGCGCTCCAAGCATCACCAAAGATGGCGTGAGCGTGGCTAAAGAGATTGAA TTAAGTTGCCCGGTGGCTAACATGGGCGCTCAACTCGTTAAAGAAGTGGCGAGCAAAACC GCTGATGCTGCCGGCGATGGCACGACCACAGCGACCGTGCTGGCTTATAGCATTTTTAAA GAAGGTTTGAGGAATATCACGGCTGGGGCTAACCCTATTGAAGTGAAAAGAGGCATGGAC AAAGCCGCTGAAGCGATCATCAATGAGCTTAAAAAAGCGAGCAAAAAAGTGGGCGGTAAA GAAGAAATCACCCAAGTGGCGACCATTTCTGCCAACTCGGATCACAATATCGGGAAACTC ATCGCTGACGCTATGGAAAAAGTGGGCAAAGACGGCGTGATCACCGTTGAAGAAGCTAAG GGCATTGAAGACGAATTGGATGTTGTAGAAGGCATGCAATTTGATAGAGGCTACCTCTCC CCTTATTTTGTAACGAACGCTGAGAAAATGACCGCTCAATTGGATAACGCTTACATCCTT TTAACGGATAAAAAAATCTCTAGCATGAAAGACATTCTCCCGCTACTAGAAAAAACCATG AAAGAGGGCAAACCGCTTTTAATCATCGCTGAAGACATTGAGGGCGAAGCTTTAACGACT CTAGTGGTGAATAAATTAAGAGGCGTGTTGAATATCGCAGCGGTTAAAGCTCCAGGCTTT GGGGACAGGAGAAAAGAAATGCTAAAAGACATCGCTATTTTAACCGGCGGTCAAGTCATT AGCGAAGAATTGGGCTTGAGTCTAGAAAACGCTGAAGTGGAGTTTTTGGGCAAAGCCGGA AGGATTGTGATTGACAAAGACAACACCACGATCGTAGATGGCAAAGGTCATAGCGATGAC GTTAAAGACAGAGTCGCGCAAATCAAAACCCAAATCGCAAGTACGACAAGCGATTATGAC AAAGAAAAATTGCAAGAAAGGTTGGCTAAACTCTCTGGCGGTGTGGCTGTGATTAAAGTG GGCGCTGCGAGCGAAGTGGAAATGAAAGAGAAAAAAGACCGGGTGGATGACGCGTTGAGC GCGACTAAAGCGGCTGTTGAAGAAGGCATTGTGATTGGCGGCGGTGCGGCTCTCATTCGC GCGGCTCAAAAAGTGCATTTGAATTTACACGATGATGAAAAAGTGGGCTATGAAATCATC ATGCGCGCCATTAAAGCCCCACTGGCTCAAATCGCTATCAATGCCGGTTATGATGGCGGT GTGGTCGTGAATGAAGTGCAAAAACACGAAGGGCATTTTGGTTTTAACGCCAGCAATGGC AAGTATGTGGACATGTTTAAAGAAGGCATTATTGACCCCTTAAAAGTAGAAAGGATCGCT TTACAAAATGCGGTTTCGGTTTCAAGCCTGCTTTTAACCACAGAAGCCACCGTGCATGAA ATCAAAGAAGAAAAAGCGGCCCCAGCAATGCCTGATATGGGTGGCATGGGCGGAATGGGA GGCATGGGCGGCATGATGTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKEIKFSDSARNLLFEGVRQLHDAVKVTMGPRGRNVLIQKSYGAPSITKDGVSVAKEIE LSCPVANMGAQLVKEVASKTADAAGDGTTTATVLAYSIFKEGLRNITAGANPIEVKRGMD KAAEAIINELKKASKKVGGKEEITQVATISANSDHNIGKLIADAMEKVGKDGVITVEEAK GIEDELDVVEGMQFDRGYLSPYFVTNAEKMTAQLDNAYILLTDKKISSMKDILPLLEKTM KEGKPLLIIAEDIEGEALTTLVVNKLRGVLNIAAVKAPGFGDRRKEMLKDIAILTGGQVI SEELGLSLENAEVEFLGKAGRIVIDKDNTTIVDGKGHSDDVKDRVAQIKTQIASTTSDYD KEKLQERLAKLSGGVAVIKVGAASEVEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIR AAQKVHLNLHDDEKVGYEIIMRAIKAPLAQIAINAGYDGGVVVNEVQKHEGHFGFNASNG KYVDMFKEGIIDPLKVERIALQNAVSVSSLLLTTEATVHEIKEEKAAPAMPDMGGMGGMG GMGGMM |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCGACCGTGCTGGCTTATAGCATTTTTAAAGAAGGTTTGAGGAATATCACGGCTGGGGCT AACCCTATTGAAGTGAAAAGAGGCATGGACAAAGCCGCTGAAGCGATCATCAATGAGCTT AAAAAAGCGAGCAAAAAAGTGGGCGGTAAAGAAGAAATCACCCAAGTGGCGACCATTTCT GCCAACTCGGATCACAATATCGGGAAACTCATCGCTGACGCTATGGAAAAAGTGGGCAAA GACGGCGTGATCACCGTTGAAGAAGCTAAGGGCATTGAAGACGAATTGGATGTTGTAGAA GGCATGCAATTTGATAGAGGCTACCTCTCCCCTTATTTTGTAACGAACGCTGAGAAAATG ACCGCTCAATTGGATAACGCTTACATCCTTTTAACGGATAAAAAAATCTCTAGCATGAAA GACATTCTCCCGCTACTAGAAAAAACCATGAAAGAGGGCAAACCGCTTTTAATCATCGCT GAAGACATTGAGGGCGAAGCTTTAACGACTCTAGTGGTGAATAAATTAAGAGGCGTGTTG AATATCGCAGCGGTT |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAYSIFKEGLRNITAGANPIEVKRGMDKAAEAIINELKKASKKVGGKEEITQVATIS ANSDHNIGKLIADAMEKVGKDGVITVEEAKGIEDELDVVEGMQFDRGYLSPYFVTNAEKM TAQLDNAYILLTDKKISSMKDILPLLEKTMKEGKPLLIIAEDIEGEALTTLVVNKLRGVL NIAAV |