Chaperonin ID: b23437
Chaperonin Group: I
Deposit Date: 2013-03-10
Type: ref
Type strain?: no
Genus: Helicobacter
Species: pylori
Strain: GAM83T
Lineage: root; cellular organisms; Bacteria; Proteobacteria; delta/epsilon subdivisions; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter
Original ID: -
CUTC ID: -
Nucleotide Genbank Accession: APEF01000071
Peptide Genbank Accession: EMH38058
Best FASTA Match: -
Date of FASTA search: -
FASTA identity %: -
Best BLASTP Match: -
Date of BLASTP search: -
BLASTP identity %: -
Source: Genbank
Notes: Reference genome for the Human Microbiome Project.
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB | 		ATGGCAAAAGAAATTAAATTTTCAGATAGCGCGAGAAACCTTCTATTTGAAGGCGTGAGA
CAACTCCATGACGCTGTTAAAGTTACCATGGGGCCAAGAGGCAGGAACGTGTTGATTCAA
AAAAGCTATGGCGCTCCAAGCATCACTAAAGATGGCGTGAGCGTGGCTAAAGAAATTGAA
TTAAGTTGCCCGGTGGCTAACATGGGCGCTCAACTCGTTAAAGAAGTAGCGAGCAAAACC
GCTGATGCCGCCGGCGATGGCACGACCACAGCGACCGTGCTGGCTTATAGCATTTTTAAA
GAAGGTTTGAGGAATATCACGGCTGGGGCTAACCCTATTGAAGTGAAACGAGGCATGGAC
AAAGCCGCTGAAGCGATCATTAATGAGCTTAAAAAAGCGAGCAAAAAAGTGGGCGGTAAA
GAAGAAATCACCCAAGTGGCGACCATTTCTGCCAACTCCGATCACAATATCGGGAAACTC
ATCGCTGACGCTATGGAAAAAGTGGGCAAAGACGGCGTGATCACCGTTGAAGAAGCTAAG
GGCATTGAAGACGAATTAGACGTTGTAGAAGGCATGCAATTTGATAGAGGCTACCTCTCC
CCTTATTTTGTAACGAACGCTGAGAAAATGACCGCTCAATTGGATAACGCTTACATCCTT
TTAACGGATAAAAAAATCTCTAGCATGAAAGACATTCTCCCGCTATTGGAAAAAACCATG
AAAGAGGGCAAACCGCTTTTAATCATCGCTGAAGACATTGAGGGCGAAGCTTTAACGACT
CTAGTGGTGAATAAACTAAGAGGCGTGTTGAATATCGCAGCGGTTAAAGCTCCAGGCTTT
GGGGACAGGAGAAAAGAAATGTTAAAAGACATCGCTATTTTAACCGGCGGTCAAGTCATT
AGCGAAGAATTAGGCTTGAGTCTAGAAAACGCTGAAGTGGAGTTTTTAGGCAAAGCCGGA
AGGATTGTGATTGACAAAGACAACACCACGATCGTAGATGGCAAAGGCCATAGCGATGAC
GTTAAAGACAGAGTCGCGCAAATCAAAACCCAAATTGCAAGCACGACAAGCGATTATGAC
AAAGAAAAATTGCAAGAAAGGTTGGCTAAACTCTCTGGCGGTGTGGCTGTGATCAAAGTG
GGCGCTGCGAGTGAAGTGGAAATGAAAGAGAAAAAAGACCGGGTGGATGACGCGTTGAGC
GCGACTAAAGCGGCGGTTGAAGAAGGCATTGTGATTGGCGGCGGTGCGGCTCTTATTCGC
GCGGCTCAAAAAGTGCATTTGAATTTACACGATGATGAAAAAGTGGGCTATGAAATCATC
ATGCGCGCCATTAAAGCCCCACTAGCTCAAATCGCTATCAATGCCGGTTATGATGGCGGT
GTGGTCGTGAATGAAGTGCAAAAACACGAAGGGCATTTTGGTTTTAACGCCAGCAATGGC
AAGTATGTGGACATGTTTAAAGAAGGCATTATTGATCCCTTAAAAGTAGAAAGGATCGCT
TTACAAAATGCGGTTTCGGTTTCAAGCCTGCTTTTAACCACAGAAGCCACCGTGCATGAA
ATCAAAGAAGAAAAAGCGGCCCCAGCAATGCCTGATATGGGTGGCATGGGCGGAATGGGA
GGCATGGGCGGCATGATGTAA
Full Peptide Sequence:
BLAST this sequence:
cpnDB | 		MAKEIKFSDSARNLLFEGVRQLHDAVKVTMGPRGRNVLIQKSYGAPSITKDGVSVAKEIE
LSCPVANMGAQLVKEVASKTADAAGDGTTTATVLAYSIFKEGLRNITAGANPIEVKRGMD
KAAEAIINELKKASKKVGGKEEITQVATISANSDHNIGKLIADAMEKVGKDGVITVEEAK
GIEDELDVVEGMQFDRGYLSPYFVTNAEKMTAQLDNAYILLTDKKISSMKDILPLLEKTM
KEGKPLLIIAEDIEGEALTTLVVNKLRGVLNIAAVKAPGFGDRRKEMLKDIAILTGGQVI
SEELGLSLENAEVEFLGKAGRIVIDKDNTTIVDGKGHSDDVKDRVAQIKTQIASTTSDYD
KEKLQERLAKLSGGVAVIKVGAASEVEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIR
AAQKVHLNLHDDEKVGYEIIMRAIKAPLAQIAINAGYDGGVVVNEVQKHEGHFGFNASNG
KYVDMFKEGIIDPLKVERIALQNAVSVSSLLLTTEATVHEIKEEKAAPAMPDMGGMGGMG
GMGGMM
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB | 		GCGACCGTGCTGGCTTATAGCATTTTTAAAGAAGGTTTGAGGAATATCACGGCTGGGGCT
AACCCTATTGAAGTGAAACGAGGCATGGACAAAGCCGCTGAAGCGATCATTAATGAGCTT
AAAAAAGCGAGCAAAAAAGTGGGCGGTAAAGAAGAAATCACCCAAGTGGCGACCATTTCT
GCCAACTCCGATCACAATATCGGGAAACTCATCGCTGACGCTATGGAAAAAGTGGGCAAA
GACGGCGTGATCACCGTTGAAGAAGCTAAGGGCATTGAAGACGAATTAGACGTTGTAGAA
GGCATGCAATTTGATAGAGGCTACCTCTCCCCTTATTTTGTAACGAACGCTGAGAAAATG
ACCGCTCAATTGGATAACGCTTACATCCTTTTAACGGATAAAAAAATCTCTAGCATGAAA
GACATTCTCCCGCTATTGGAAAAAACCATGAAAGAGGGCAAACCGCTTTTAATCATCGCT
GAAGACATTGAGGGCGAAGCTTTAACGACTCTAGTGGTGAATAAACTAAGAGGCGTGTTG
AATATCGCAGCGGTT
Peptide UT Sequence:
BLAST this sequence:
cpnDB | 		ATVLAYSIFKEGLRNITAGANPIEVKRGMDKAAEAIINELKKASKKVGGKEEITQVATIS
ANSDHNIGKLIADAMEKVGKDGVITVEEAKGIEDELDVVEGMQFDRGYLSPYFVTNAEKM
TAQLDNAYILLTDKKISSMKDILPLLEKTMKEGKPLLIIAEDIEGEALTTLVVNKLRGVL
NIAAV