Chaperonin ID: b20623
Chaperonin Group: I
Deposit Date: 2012-06-27
Type: ref
Type strain?: no
Genus: Helicobacter
Species: pylori
Strain: Shi417
Lineage: root; cellular organisms; Bacteria; Proteobacteria; delta/epsilon subdivisions; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter
Original ID: -
CUTC ID: -
Nucleotide Genbank Accession: NC_017739
Peptide Genbank Accession: YP_006223671
Best FASTA Match: -
Date of FASTA search: -
FASTA identity %: -
Best BLASTP Match: -
Date of BLASTP search: -
BLASTP identity %: -
Source: Genbank
Notes: -
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB | 		ATGGCAAAAGAAATCAAATTTTCAGATAACGCAAGAAACCTTTTATTTGAAGGCGTGAGA
CAACTCCATGACGCTGTCAAAGTAACCATGGGGCCAAGAGGCAGGAATGTGTTGATCCAA
AAAAGCTATGGCGCTCCAAGCATCACCAAAGACGGCGTGAGCGTGGCTAAAGAGATTGAA
TTAAGTTGCCCGGTAGCTAACATGGGTGCTCAACTCGTTAAAGAAGTAGCGAGCAAAACC
GCTGATGCCGCCGGCGATGGCACGACCACAGCGACCGTGCTTGCTTATAGCATTTTTAAA
GAGGGCTTGAGGAATATCACGGCTGGGGCTAACCCTATTGAAGTGAAACGAGGCATGGAT
AAAGCCACTGAAGCCATTATTAATGAGCTTAAAAAAGCGAGCAAAGAAGTAGGCGGTAAA
GAAGAAATCACCCAAGTAGCGACCATTTCTGCAAACTCCGATCACAATATCGGGAAACTC
ATCGCTGACGCTATGGAAAAAGTGGGTAAAGACGGCGTGATCACCGTTGAAGAAGCTAAG
GGCATTGAAGATGAATTAGATGTCGTAGAGGGGATGCAATTTGATAGAGGCTACCTCTCC
CCTTATTTTGTAACAAACGCTGAGAAAATGACCGCTCAATTGGATAACGCTTACATCCTT
TTAACGGATAAAAAAATCTCTAGCATGAAAGACATTCTCCCGCTACTAGAAAAAACCATG
AAAGAGGGCAAACCGCTTTTAATCATCGCTGAAGACATTGAGGGCGAAGCTTTAACGACT
CTAGTGGTGAATAAATTAAGAGGCGTGTTGAATATTGCAGCGGTTAAAGCTCCAGGCTTT
GGGGACAGAAGAAAAGAAATGCTCAAAGACATCGCTGTTTTAACCGGCGGTCAAGTTATT
AGCGAAGAATTAGGCTTGACTTTAGAAAACGCTGAAGTGGAGTTTTTAGGCAAAGCCGGA
AGGATTGTGATTGACAAAGACAACACCACGATCGTAGATGGCAAAGGCCATAGCCATGAT
GTCAAAGACAGAGTCGCGCAAATCAAAACCCAAATTGCAAGCACGACAAGCGATTATGAC
AAAGAAAAATTGCAAGAAAGATTGGCTAAACTCTCTGGCGGTGTGGCTGTGATTAAAGTG
GGCGCTGCGAGTGAAGTGGAAATGAAAGAGAAAAAAGACCGGGTTGATGATGCGTTGAGC
GCGACTAAAGCGGCTGTTGAAGAAGGCATTGTTATTGGTGGCGGTGCGGCTCTCATTCGT
GCGGCTCAAAAAGTGCATTTGAATTTACACGATGATGAAAAAGTGGGCTATGAAATCATC
ATGCGCGCCATTAAAGCCCCATTAGCTCAAATCGCTATCAATGCCGGTTATGATGGCGGT
GTGGTCGTGAATGAAGTGGAAAAACACGAAGGGCATTTTGGTTTTAACGCTAGCAATGGC
AAGTATGTGGATATGTTTAAAGAAGGCATTATTGACCCCTTAAAAGTAGAAAGGATCGCT
TTACAAAATGCGGTTTCGGTTTCAAGCCTGCTTTTAACCACAGAAGCCACCGTGCATGAA
ATCAAAGAAGAAAAAGCAACCCCAGCAATGCCTGATATGGGTGGCATGGGCGGTATGGGA
GGCATGGGCGGCATGATGTAA
Full Peptide Sequence:
BLAST this sequence:
cpnDB | 		MAKEIKFSDNARNLLFEGVRQLHDAVKVTMGPRGRNVLIQKSYGAPSITKDGVSVAKEIE
LSCPVANMGAQLVKEVASKTADAAGDGTTTATVLAYSIFKEGLRNITAGANPIEVKRGMD
KATEAIINELKKASKEVGGKEEITQVATISANSDHNIGKLIADAMEKVGKDGVITVEEAK
GIEDELDVVEGMQFDRGYLSPYFVTNAEKMTAQLDNAYILLTDKKISSMKDILPLLEKTM
KEGKPLLIIAEDIEGEALTTLVVNKLRGVLNIAAVKAPGFGDRRKEMLKDIAVLTGGQVI
SEELGLTLENAEVEFLGKAGRIVIDKDNTTIVDGKGHSHDVKDRVAQIKTQIASTTSDYD
KEKLQERLAKLSGGVAVIKVGAASEVEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIR
AAQKVHLNLHDDEKVGYEIIMRAIKAPLAQIAINAGYDGGVVVNEVEKHEGHFGFNASNG
KYVDMFKEGIIDPLKVERIALQNAVSVSSLLLTTEATVHEIKEEKATPAMPDMGGMGGMG
GMGGMM
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB | 		GCGACCGTGCTTGCTTATAGCATTTTTAAAGAGGGCTTGAGGAATATCACGGCTGGGGCT
AACCCTATTGAAGTGAAACGAGGCATGGATAAAGCCACTGAAGCCATTATTAATGAGCTT
AAAAAAGCGAGCAAAGAAGTAGGCGGTAAAGAAGAAATCACCCAAGTAGCGACCATTTCT
GCAAACTCCGATCACAATATCGGGAAACTCATCGCTGACGCTATGGAAAAAGTGGGTAAA
GACGGCGTGATCACCGTTGAAGAAGCTAAGGGCATTGAAGATGAATTAGATGTCGTAGAG
GGGATGCAATTTGATAGAGGCTACCTCTCCCCTTATTTTGTAACAAACGCTGAGAAAATG
ACCGCTCAATTGGATAACGCTTACATCCTTTTAACGGATAAAAAAATCTCTAGCATGAAA
GACATTCTCCCGCTACTAGAAAAAACCATGAAAGAGGGCAAACCGCTTTTAATCATCGCT
GAAGACATTGAGGGCGAAGCTTTAACGACTCTAGTGGTGAATAAATTAAGAGGCGTGTTG
AATATTGCAGCGGTT
Peptide UT Sequence:
BLAST this sequence:
cpnDB | 		ATVLAYSIFKEGLRNITAGANPIEVKRGMDKATEAIINELKKASKEVGGKEEITQVATIS
ANSDHNIGKLIADAMEKVGKDGVITVEEAKGIEDELDVVEGMQFDRGYLSPYFVTNAEKM
TAQLDNAYILLTDKKISSMKDILPLLEKTMKEGKPLLIIAEDIEGEALTTLVVNKLRGVL
NIAAV