Chaperonin ID: b20621
Chaperonin Group: I
Deposit Date: 2012-06-27
Type: ref
Type strain?: no
Genus: Helicobacter
Species: pylori
Strain: Shi112
Lineage: root; cellular organisms; Bacteria; Proteobacteria; delta/epsilon subdivisions; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter
Original ID: -
CUTC ID: -
Nucleotide Genbank Accession: NC_017741
Peptide Genbank Accession: YP_006226744
Best FASTA Match: -
Date of FASTA search: -
FASTA identity %: -
Best BLASTP Match: -
Date of BLASTP search: -
BLASTP identity %: -
Source: Genbank
Notes: -
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB | 		ATGGCAAAAGAAATCAAATTTTCAGATAGTGCAAGAAACCTTTTATTTGAAGGCGTGAGA
CAACTCCATGACGCTGTCAAAGTAACCATGGGGCCAAGAGGTAGGAATGTGTTGATCCAA
AAAAGCTATGGCGCTCCAAGCATCACCAAAGACGGCGTGAGCGTGGCTAAAGAGATTGAA
TTAAGTTGCCCGGTGGCTAACATGGGCGCTCAACTCGTTAAAGAAGTAGCGAGCAAAACC
GCTGATGCTGCCGGCGATGGCACGACCACAGCGACCGTGCTTGCTTATAGCATTTTTAAA
GAGGGTTTGAGGAATATCACGGCTGGGGCTAACCCTATTGAAGTGAAACGAGGCATGGAT
AAAGCCGCTGAAGCCATTATTAATGAGCTTAAAAAAGCGAGCAAAAAAGTAGGCGGTAAA
GAAGAAATCACCCAAGTAGCGACCATTTCTGCAAACTCTGATCACAATATCGGGAAACTC
ATCGCTGACGCTATGGAAAAAGTGGGTAAAGACGGCGTGATCACCGTTGAAGAAGCTAAG
GGCATTGAAGATGAATTAGATGTCGTAGAGGGCATGCAATTTGATAGAGGCTATCTCTCC
CCTTATTTTGTAACAAATGCTGAGAAAATGACCGCTCAATTGGATAACGCTTACATCCTT
TTAACGGATAAAAAAATCTCTAGCATGAAAGACATTCTCCCGCTACTAGAAAAAACCATG
AAAGAGGGCAAACCGCTTTTAATCATCGCTGAAGACATTGAGGGCGAAGCTTTAACGACT
CTAGTGGTGAATAAATTAAGAGGCGTGTTGAATATCGCAGCGGTTAAGGCTCCAGGCTTT
GGGGACAGAAGAAAAGAAATGCTCAAAGACATCGCTGTTTTAACCGGCGGTCAAGTTATT
AGCGAAGAATTAGGCTTGACTTTAGAAAACGCTGAAGTGGAGTTTTTAGGCAAAGCCGGA
AGGATTGTGATTGACAAAGACAACACCACAATCGTAGATGGCAAAGGCCATAGCCATGAT
GTCAAAGACAGAGTCGCACAAATCAAAACCCAAATTGCAAGCACGACAAGCGATTATGAC
AAAGAAAAATTGCAAGAAAGATTGGCTAAACTCTCTGGCGGTGTGGCTGTGATTAAAGTG
GGCGCTGCGAGTGAAGTGGAAATGAAAGAGAAAAAAGACCGGGTTGATGACGCGTTGAGC
GCGACTAAAGCGGCTGTTGAAGAAGGCATTGTTATTGGCGGCGGTGCGGCTCTCATTCGC
GCGGCTCAAAAAGTGCATTTGAATTTACACGATGATGAAAAAGTGGGCTATGAAATCATC
ATGCGCGCCATTAAAGCCCCACTAGCCCAAATCGCTATCAATGCCGGTTATGATGGCGGT
GTGGTCGTGAATGAAGTGCAAAAACACGAAGGGCATTTTGGTTTTAACGCTAGCAATGGC
AAGTATGTGGATATGTTTAAAGAAGGCATTATTGACCCCTTAAAAGTAGAAAGGATCGCT
CTACAAAATGCGGTTTCGGTTTCAAGCCTGCTTTTAACCACAGAAGCCACCGTGCATGAA
ATCAAAGAAGAAAAAGCAACCCCAGCAATGCCTGATATGGGAGGCATGGGCGGTATGGGA
GGCATGGGTGGCATGATGTAA
Full Peptide Sequence:
BLAST this sequence:
cpnDB | 		MAKEIKFSDSARNLLFEGVRQLHDAVKVTMGPRGRNVLIQKSYGAPSITKDGVSVAKEIE
LSCPVANMGAQLVKEVASKTADAAGDGTTTATVLAYSIFKEGLRNITAGANPIEVKRGMD
KAAEAIINELKKASKKVGGKEEITQVATISANSDHNIGKLIADAMEKVGKDGVITVEEAK
GIEDELDVVEGMQFDRGYLSPYFVTNAEKMTAQLDNAYILLTDKKISSMKDILPLLEKTM
KEGKPLLIIAEDIEGEALTTLVVNKLRGVLNIAAVKAPGFGDRRKEMLKDIAVLTGGQVI
SEELGLTLENAEVEFLGKAGRIVIDKDNTTIVDGKGHSHDVKDRVAQIKTQIASTTSDYD
KEKLQERLAKLSGGVAVIKVGAASEVEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIR
AAQKVHLNLHDDEKVGYEIIMRAIKAPLAQIAINAGYDGGVVVNEVQKHEGHFGFNASNG
KYVDMFKEGIIDPLKVERIALQNAVSVSSLLLTTEATVHEIKEEKATPAMPDMGGMGGMG
GMGGMM
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB | 		GCGACCGTGCTTGCTTATAGCATTTTTAAAGAGGGTTTGAGGAATATCACGGCTGGGGCT
AACCCTATTGAAGTGAAACGAGGCATGGATAAAGCCGCTGAAGCCATTATTAATGAGCTT
AAAAAAGCGAGCAAAAAAGTAGGCGGTAAAGAAGAAATCACCCAAGTAGCGACCATTTCT
GCAAACTCTGATCACAATATCGGGAAACTCATCGCTGACGCTATGGAAAAAGTGGGTAAA
GACGGCGTGATCACCGTTGAAGAAGCTAAGGGCATTGAAGATGAATTAGATGTCGTAGAG
GGCATGCAATTTGATAGAGGCTATCTCTCCCCTTATTTTGTAACAAATGCTGAGAAAATG
ACCGCTCAATTGGATAACGCTTACATCCTTTTAACGGATAAAAAAATCTCTAGCATGAAA
GACATTCTCCCGCTACTAGAAAAAACCATGAAAGAGGGCAAACCGCTTTTAATCATCGCT
GAAGACATTGAGGGCGAAGCTTTAACGACTCTAGTGGTGAATAAATTAAGAGGCGTGTTG
AATATCGCAGCGGTT
Peptide UT Sequence:
BLAST this sequence:
cpnDB | 		ATVLAYSIFKEGLRNITAGANPIEVKRGMDKAAEAIINELKKASKKVGGKEEITQVATIS
ANSDHNIGKLIADAMEKVGKDGVITVEEAKGIEDELDVVEGMQFDRGYLSPYFVTNAEKM
TAQLDNAYILLTDKKISSMKDILPLLEKTMKEGKPLLIIAEDIEGEALTTLVVNKLRGVL
NIAAV