RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b19539 |
| Chaperonin Group: | I |
| Deposit Date: | 2009-11-11 |
| Type: | ref |
| Type strain?: | yes |
| Genus: | Roseburia |
| Species: | hominis |
| Strain: | A2-183 |
| Lineage: | root; cellular organisms; Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | CP003040 |
| Peptide Genbank Accession: | AEN96977 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | Type strain synonyms A2-183 = DSM 16839 = NCIMB 14029. |
|
Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAAAGGAAATCAAATACGGAACAGAGGCAAGAACAGCATTAGGAGCCGGCGTAGAT AAGCTGGCAAATACCGTCAGAGTAACACTCGGACCGAAAGGAAGAAACGTCGTACTCGAC AAGTCCTACGGAGCACCACTTATCACCAACGATGGTGTGACGATCGCAAAGGAGATCGAG CTTGAGGATGCATTCGAGAACATGGGAGCACAGCTCGTCAAGGAAGTTGCAACCAAGACC AACGATGTTGCCGGTGACGGTACCACAACCGCAACCGTACTTGCACAGGCAATGATCCAG GAAGGTATGAAGAATCTGGAGGCAGGCGCCAACCCGATCGTGCTTCGCCGCGGTATGAAG AAGGCAACAGACAAGGCAGTGGAGTCCATCCTTGCAATGTCTTCCAAAGTAAAAGGAAAA GATCAGATCGCAAAAGTTGCAGCTATCTCTGCAGGTGACGAGGAAGTCGGCAACATGGTA GCAGATGCGATGGAGAAGGTATCTAACGATGGCGTTATCACCATCGAGGAGTCCAAGACC ATGCAGACAGAGCTTGATCTGGTAGAAGGTATGCAGTTTGACCGTGGATATGTATCCGCA TATATGTGCACCGATATGGATAAAATGGAAGCGGTTCTGGATGATCCGTATATCTTAATC ACAGATAAGAAGATCAGCAACATTCAGGAGATCCTGCCGTTATTAGAGCAGATCGTACAG AGCGGCGCAAGACTTCTCATCATCGCTGAGGACATCGAGGGCGAGGCACTTACAACATTG ATCGTCAACAAACTGCGTGGTACTTTCAATGTAGTGGCAGTCAAGGCTCCGGGCTACGGC GATAGAAGAAAGGCAATGCTCGAGGATATCGCAATCTTAACCGGCGGTCAGGTTATCAGC TCCGATCTCGGATTAGAGCTTAAGGATACCACAATGGATCAGCTCGGACGTGCAAAATCC GTTAAAGTTCAGAAGGAGAACACGGTAATCGTGGACGGTGCAGGCAATAAGGACGCTATT CAGGCGAGAATCCACCAGATCCGCGGTCAGATCGAGGAGACAACTTCCGAGTTCGACAAG GAGAAGTTACAGGAGCGTCTTGCAAAGCTTGCAGGCGGCGTAGCAGTGATCCGTGTCGGC GCAGCAACTGAGACGGAGATGAAGGAAGCAAAGCTTCGTATGGAAGATGCGTTAAACGCA ACGAGAGCAGCAGTCGAGGAAGGCATCATTGCAGGAGGCGGTTCCGCATACATTCATGCA ACCAAGGATGTGGCAGCACTCGCAGATACGCTTGAGGGCGATGAGAAGACCGGTGCGAAG GTTATCTTAAAGGCATTGGAGGCTCCGCTGTACTACATTTCCGCAAATGCAGGATTAGAG GGCGCAGTCATCATCAATAAAGTAAAAGAATCTCCGGCAGGCGTTGGATTTAACGCAGCA ACGGAGCAGTATGTAGACATGGTAGAGCAGGGTATCCTGGATCCGGTTAAGGTGACAAGA ACCGCATTACAGAACGCAACTTCTGTAGCATCTACCTTACTTACCACAGAGTCTGTGGTG GCAAACATCAAAGAGGACGCACCGGCAATGCCGGCAGGCGGCGCAGGCGGAATGGGAATG ATGTAA |
|
Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKEIKYGTEARTALGAGVDKLANTVRVTLGPKGRNVVLDKSYGAPLITNDGVTIAKEIE LEDAFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAMIQEGMKNLEAGANPIVLRRGMK KATDKAVESILAMSSKVKGKDQIAKVAAISAGDEEVGNMVADAMEKVSNDGVITIEESKT MQTELDLVEGMQFDRGYVSAYMCTDMDKMEAVLDDPYILITDKKISNIQEILPLLEQIVQ SGARLLIIAEDIEGEALTTLIVNKLRGTFNVVAVKAPGYGDRRKAMLEDIAILTGGQVIS SDLGLELKDTTMDQLGRAKSVKVQKENTVIVDGAGNKDAIQARIHQIRGQIEETTSEFDK EKLQERLAKLAGGVAVIRVGAATETEMKEAKLRMEDALNATRAAVEEGIIAGGGSAYIHA TKDVAALADTLEGDEKTGAKVILKALEAPLYYISANAGLEGAVIINKVKESPAGVGFNAA TEQYVDMVEQGILDPVKVTRTALQNATSVASTLLTTESVVANIKEDAPAMPAGGAGGMGM M |
|
Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACCGTACTTGCACAGGCAATGATCCAGGAAGGTATGAAGAATCTGGAGGCAGGCGCC AACCCGATCGTGCTTCGCCGCGGTATGAAGAAGGCAACAGACAAGGCAGTGGAGTCCATC CTTGCAATGTCTTCCAAAGTAAAAGGAAAAGATCAGATCGCAAAAGTTGCAGCTATCTCT GCAGGTGACGAGGAAGTCGGCAACATGGTAGCAGATGCGATGGAGAAGGTATCTAACGAT GGCGTTATCACCATCGAGGAGTCCAAGACCATGCAGACAGAGCTTGATCTGGTAGAAGGT ATGCAGTTTGACCGTGGATATGTATCCGCATATATGTGCACCGATATGGATAAAATGGAA GCGGTTCTGGATGATCCGTATATCTTAATCACAGATAAGAAGATCAGCAACATTCAGGAG ATCCTGCCGTTATTAGAGCAGATCGTACAGAGCGGCGCAAGACTTCTCATCATCGCTGAG GACATCGAGGGCGAGGCACTTACAACATTGATCGTCAACAAACTGCGTGGTACTTTCAAT GTAGTGGCAGTC |
|
Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAMIQEGMKNLEAGANPIVLRRGMKKATDKAVESILAMSSKVKGKDQIAKVAAIS AGDEEVGNMVADAMEKVSNDGVITIEESKTMQTELDLVEGMQFDRGYVSAYMCTDMDKME AVLDDPYILITDKKISNIQEILPLLEQIVQSGARLLIIAEDIEGEALTTLIVNKLRGTFN VVAV |