Chaperonin ID: b19048
Chaperonin Group: I
Deposit Date: 2011-05-23
Type: ref
Type strain?: no
Genus: Alteromonas
Species: sp.
Strain: SN2
Lineage: root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas
Original ID: -
CUTC ID: -
Nucleotide Genbank Accession: CP002339
Peptide Genbank Accession: AEF05693
Best FASTA Match: -
Date of FASTA search: -
FASTA identity %: -
Best BLASTP Match: -
Date of BLASTP search: -
BLASTP identity %: -
Source: Genbank
Notes: Isolate was obtained from crude oil contaminated sea site and has a capacity to degrade PAH's compounds present in crude oil.
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB | 		ATGGCAGCTAAAGAAGTACGTTTTGGTAACGACGCTCGTACAAAAATGCTTAAAGGCGTA
AACACGCTAGCAAACGCAGTGAAAGTTACACTAGGTCCTAAAGGCCGTAACGTAGTACTA
GATAAGTCTTTCGGCGCTCCTACCATCACTAAAGATGGTGTATCTGTAGCCAAAGAAATC
GAACTTGAAGACAAGTTTGAGAACATGGGCGCGCAGATGGTTAAAGAAGTTGCGTCTAAA
GCGAATGACGAAGCGGGTGACGGTACAACTACTGCAACTGTTTTAGCACAAGCTATTATC
ACTGAAGGTCACAAGTCTGTTGCTGCAGGCATGAACCCAATGGATCTTAAGCGTGGTATC
GACAAAGCAGTTATTGCTGCGGTTGAAGAGCTTAAAGCCCTATCTACTGATTGTGCTGAC
AGCAAGTCAATTGCTCAGGTTGGTACTATCTCTGCAAACTCTGATGCAGAAGTTGGCGAC
ATCATTGCTCAAGCAATGGAAAAAGTAGGTAAGGAAGGCGTAATTACTGTTGAAGAAGGT
CAAGCACTTCAAAACGAACTTGACGTTGTTGAAGGTATGCAGTTCGACCGCGGTTACCTA
TCTCCTTACTTCATTAACAACCAAGAGAACGGCACTGTTGAACTAGACAGCCCTTTCATC
CTATTGGTTGATAAGAAAATTTCTAACATCCGTGAGTTGCTTCCTACCCTTGAAGGCGTA
GCAAAAGCAGGTAAGCCACTGATGATTATTGCTGAAGATGTTGAAGGCGAAGCCTTAGCT
ACACTAGTAGTAAACAACATGCGCGGTATTGTTAAAGTTGCTGCTGTTAAAGCACCTGGC
TTTGGTGACCGTCGTAAAGCAATGCTTCAAGACATCGCTATTCTTACTGGTGGTACGGTT
ATCTCTGAAGAGATTGGTCTAGACCTTGAAAAAGTAGAGCTAGAAGACCTTGGTACCGCT
AAGCGCGTAGTTATCAACAAAGACAATACTACTATTGTTGATGGTAACGGCGACGAAGAA
GCGATAGAAGGCCGTTGTGCTCAAATTAAAGGTCAAATTGAAGACTCTTCTTCAGACTAC
GACAAAGAAAAGCTTCAAGAGCGTTTAGCTAAGCTTTCTGGCGGTGTTGCAGTAATTAAA
GTTGGTGCTGCTACCGAAGTAGAAATGAAAGAGAAGAAAGACCGCGTTGAAGATGCACTT
CATGCAACTCGCGCCGCGGTTGAAGAAGGCGTAGTACCTGGTGGTGGTGTGGCGCTAGTT
CGTGCAGCAGCTAAGCTTGCTAGCCTAACTGGCGAAAACGAAGACCAAACTGTAGGTATT
AAGCTTGCACTACGTGCAATGGAAGCGCCTTTACGTCAAATCGCTAGCAACGCCGGTGCA
GAAGCATCTGTTGTGGTTAACGAAGTGAAAAATGGCGACGGTAACTACGGTTACAATGCG
GGCAACGACACGTACGGCGACATGCTAGAGATGGGTATTCTTGACCCAACTAAAGTAACG
CGCTCTGCACTACAGTTCGCAGCATCAATCGCTTCACTTATGATTACAACTGAAGCCATG
ATTGCAGATATACCTCAAGACGAAGCAGCGCCTGCAATGCCTGATATGGGCGGCATGGGT
GGAATGGGCGGCATGATGTAA
Full Peptide Sequence:
BLAST this sequence:
cpnDB | 		MAAKEVRFGNDARTKMLKGVNTLANAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDEAGDGTTTATVLAQAIITEGHKSVAAGMNPMDLKRGI
DKAVIAAVEELKALSTDCADSKSIAQVGTISANSDAEVGDIIAQAMEKVGKEGVITVEEG
QALQNELDVVEGMQFDRGYLSPYFINNQENGTVELDSPFILLVDKKISNIRELLPTLEGV
AKAGKPLMIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
ISEEIGLDLEKVELEDLGTAKRVVINKDNTTIVDGNGDEEAIEGRCAQIKGQIEDSSSDY
DKEKLQERLAKLSGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVPGGGVALV
RAAAKLASLTGENEDQTVGIKLALRAMEAPLRQIASNAGAEASVVVNEVKNGDGNYGYNA
GNDTYGDMLEMGILDPTKVTRSALQFAASIASLMITTEAMIADIPQDEAAPAMPDMGGMG
GMGGMM
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB | 		GCAACTGTTTTAGCACAAGCTATTATCACTGAAGGTCACAAGTCTGTTGCTGCAGGCATG
AACCCAATGGATCTTAAGCGTGGTATCGACAAAGCAGTTATTGCTGCGGTTGAAGAGCTT
AAAGCCCTATCTACTGATTGTGCTGACAGCAAGTCAATTGCTCAGGTTGGTACTATCTCT
GCAAACTCTGATGCAGAAGTTGGCGACATCATTGCTCAAGCAATGGAAAAAGTAGGTAAG
GAAGGCGTAATTACTGTTGAAGAAGGTCAAGCACTTCAAAACGAACTTGACGTTGTTGAA
GGTATGCAGTTCGACCGCGGTTACCTATCTCCTTACTTCATTAACAACCAAGAGAACGGC
ACTGTTGAACTAGACAGCCCTTTCATCCTATTGGTTGATAAGAAAATTTCTAACATCCGT
GAGTTGCTTCCTACCCTTGAAGGCGTAGCAAAAGCAGGTAAGCCACTGATGATTATTGCT
GAAGATGTTGAAGGCGAAGCCTTAGCTACACTAGTAGTAAACAACATGCGCGGTATTGTT
AAAGTTGCTGCTGTT
Peptide UT Sequence:
BLAST this sequence:
cpnDB | 		ATVLAQAIITEGHKSVAAGMNPMDLKRGIDKAVIAAVEELKALSTDCADSKSIAQVGTIS
ANSDAEVGDIIAQAMEKVGKEGVITVEEGQALQNELDVVEGMQFDRGYLSPYFINNQENG
TVELDSPFILLVDKKISNIRELLPTLEGVAKAGKPLMIIAEDVEGEALATLVVNNMRGIV
KVAAV