RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b18909 |
| Chaperonin Group: | I |
| Deposit Date: | 2011-05-02 |
| Type: | ref |
| Type strain?: | yes |
| Genus: | Paraprevotella |
| Species: | xylaniphila |
| Strain: | YIT 11841 |
| Lineage: | root; cellular organisms; Bacteria; Bacteroidetes/Chlorobi group; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella |
| Original ID: | DSM 19681 |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | NZ_AFBR01000040 |
| Peptide Genbank Accession: | ZP_08320552 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | Type strain synonyms YIT 11841 = DSM 19681 = JCM 14860. Reference genome for the Human Microbiome Project. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAAAAGATATTAAATTCAACATAGAAGCCCGTGAACTGATGAAGAACGGAGTGGAT CAGTTGGCCAATGCGGTAAAGGTAACTCTCGGCCCGAAAGGACGTAACGTCATTATCGAA AAGAAATTCGGTGCGCCGCATATTACGAAAGACGGCGTGACCGTAGCCAAGGAAATTGAG TTGGCCGATGCGTTTGAAAACGCAGGTGCGCAGTTGGTCAAGAGCGTGGCTAGCAAAACA GGCGACGATGCCGGTGACGGAACGACCACGGCTACCGTATTGGCACAAAGCATCGTGAGC GTGGGCTTGAAGAACGTGGCTGCCGGTGCGAACCCGATGGACTTGAAGCGCGGTATCGAC AAGGCCGTGGCCAAAGTCGTAGAGCATATCAAAGGTCAGGCTGAACAAGTGGGCGACGAT TACAACAAGATAGAACAAGTGGCTACCGTCAGTGCCAACAATGACCCGGAAATCGGGAAA CTTTTGGCCGAAGCCATGAAGAAAGTCAGCAAGGACGGTGTGATTACTATCGAAGAGGCT AAGGGACGCGACACTACTATCGGTGTGGTGGAAGGCATGCAGTTCGACCGCGGCTACTTG TCGGCTTATTTCGTGACCGATACGGAGAAGATGGAGTGCGTGATGGAGAATCCTTACATC TTGATTTACGACAAGAAGATTTCCAACTTGAAGGATTTCCTGCCTATCCTCGAACCGGCA GTACAAAGCGGTCGCCCGTTGTTGGTGATTGCGGAAGACGTAGACAGCGAGGCGTTGACT ACTTTGGTGGTGAACCGTCTGCGTAGCCAGTTGAAGATTTGTGCCGTGAAAGCTCCGGGC TTCGGCGACCGCCGCAAGGCCATGTTGGAAGATATTGCCGTGTTGACGGGCGGTGTGGTC ATCAGCGAAGAGAAGGGCTTGAAGTTGGAGCAGGCTACCATCGAAATGTTGGGTACTTGC GACAAGGTGACTATCTCTAAGGATAACACGACCATCGTTAACGGTCACGGACAGAGCGAA CTCATCAAGGATCGTGTCAATCAGATTAAGAATGAGATTGCCAACTCTACCAGCGACTAC GACAAAGAGAAGTTGCAGGAGCGTCTGGCTAAGTTGAGCGGTGGTGTGGCTGTGCTCTAT GTCGGTGCACCGAGTGAGGTGGAAATGAAAGAAAAGAAAGACCGTGTGGACGATGCCTTG TGTGCAACTCGTGCAGCTATCGAGGAAGGTATCATCCCGGGTGGCGGTGTGGCATATATC CGCGCCATCAAGGCTTTGGAAGGCTTGGAGGGTGCCAATGCAGACGAAACCACAGGTATC AATATCGTAAAACGCGCCATCGAAGAACCTCTCCGCCAGATTGTGGAGAACGCAGGTCTG GAAGGTTCGGTGGTTGTAGAAAAAGTACGCCAGGCTGAAGGCGACTTCGGTTACAATGCC CGTGAGGACAAATACGAGAACATGAAAGCCAGCGGTATCATCGACCCGGCCAAGGTGACT CGTGTGGCTTTGGAGAATGCCGCTTCTATTGCCGGCATGTTCTTGACTACCGAATGTGTC ATCTGCGACAAGAAGGAAGAAAAAGCCGATATGCCGATGGGTGCTCCCGGAATGGGTGGC ATGGGCGGCATGATGTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKDIKFNIEARELMKNGVDQLANAVKVTLGPKGRNVIIEKKFGAPHITKDGVTVAKEIE LADAFENAGAQLVKSVASKTGDDAGDGTTTATVLAQSIVSVGLKNVAAGANPMDLKRGID KAVAKVVEHIKGQAEQVGDDYNKIEQVATVSANNDPEIGKLLAEAMKKVSKDGVITIEEA KGRDTTIGVVEGMQFDRGYLSAYFVTDTEKMECVMENPYILIYDKKISNLKDFLPILEPA VQSGRPLLVIAEDVDSEALTTLVVNRLRSQLKICAVKAPGFGDRRKAMLEDIAVLTGGVV ISEEKGLKLEQATIEMLGTCDKVTISKDNTTIVNGHGQSELIKDRVNQIKNEIANSTSDY DKEKLQERLAKLSGGVAVLYVGAPSEVEMKEKKDRVDDALCATRAAIEEGIIPGGGVAYI RAIKALEGLEGANADETTGINIVKRAIEEPLRQIVENAGLEGSVVVEKVRQAEGDFGYNA REDKYENMKASGIIDPAKVTRVALENAASIAGMFLTTECVICDKKEEKADMPMGAPGMGG MGGMM |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCTACCGTATTGGCACAAAGCATCGTGAGCGTGGGCTTGAAGAACGTGGCTGCCGGTGCG AACCCGATGGACTTGAAGCGCGGTATCGACAAGGCCGTGGCCAAAGTCGTAGAGCATATC AAAGGTCAGGCTGAACAAGTGGGCGACGATTACAACAAGATAGAACAAGTGGCTACCGTC AGTGCCAACAATGACCCGGAAATCGGGAAACTTTTGGCCGAAGCCATGAAGAAAGTCAGC AAGGACGGTGTGATTACTATCGAAGAGGCTAAGGGACGCGACACTACTATCGGTGTGGTG GAAGGCATGCAGTTCGACCGCGGCTACTTGTCGGCTTATTTCGTGACCGATACGGAGAAG ATGGAGTGCGTGATGGAGAATCCTTACATCTTGATTTACGACAAGAAGATTTCCAACTTG AAGGATTTCCTGCCTATCCTCGAACCGGCAGTACAAAGCGGTCGCCCGTTGTTGGTGATT GCGGAAGACGTAGACAGCGAGGCGTTGACTACTTTGGTGGTGAACCGTCTGCGTAGCCAG TTGAAGATTTGTGCCGTG |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQSIVSVGLKNVAAGANPMDLKRGIDKAVAKVVEHIKGQAEQVGDDYNKIEQVATV SANNDPEIGKLLAEAMKKVSKDGVITIEEAKGRDTTIGVVEGMQFDRGYLSAYFVTDTEK MECVMENPYILIYDKKISNLKDFLPILEPAVQSGRPLLVIAEDVDSEALTTLVVNRLRSQ LKICAV |